2020-04-24 23:36:52 +00:00
|
|
|
{ lib
|
|
|
|
|
, buildPythonPackage
|
|
|
|
|
, fetchPypi
|
|
|
|
|
, scikitlearn
|
|
|
|
|
, numpy
|
|
|
|
|
, matplotlib
|
|
|
|
|
, scipy
|
|
|
|
|
, hopcroftkarp
|
|
|
|
|
, pytest
|
|
|
|
|
}:
|
|
|
|
|
|
|
|
|
|
buildPythonPackage rec {
|
|
|
|
|
pname = "persim";
|
2020-08-20 17:08:02 +00:00
|
|
|
version = "0.1.3";
|
2020-04-24 23:36:52 +00:00
|
|
|
|
|
|
|
|
src = fetchPypi {
|
|
|
|
|
inherit pname version;
|
2020-08-20 17:08:02 +00:00
|
|
|
sha256 = "be4ea4bfc2a0c6fcfc28ebd52e23a351ee00b0ef0ddaf527526bd0f919145348";
|
2020-04-24 23:36:52 +00:00
|
|
|
};
|
|
|
|
|
|
|
|
|
|
propagatedBuildInputs = [
|
|
|
|
|
scikitlearn
|
|
|
|
|
numpy
|
|
|
|
|
matplotlib
|
|
|
|
|
scipy
|
|
|
|
|
hopcroftkarp
|
|
|
|
|
];
|
|
|
|
|
|
|
|
|
|
checkInputs = [
|
|
|
|
|
pytest
|
|
|
|
|
];
|
|
|
|
|
|
|
|
|
|
checkPhase = ''
|
|
|
|
|
# specifically needed for darwin
|
|
|
|
|
export HOME=$(mktemp -d)
|
|
|
|
|
mkdir -p $HOME/.matplotlib
|
|
|
|
|
echo "backend: ps" > $HOME/.matplotlib/matplotlibrc
|
|
|
|
|
|
|
|
|
|
# ignore tests due to python 2.7 fail
|
|
|
|
|
pytest --ignore test/test_plots.py \
|
|
|
|
|
--ignore test/test_visuals.py
|
|
|
|
|
'';
|
|
|
|
|
|
|
|
|
|
meta = with lib; {
|
|
|
|
|
description = "Distances and representations of persistence diagrams";
|
|
|
|
|
homepage = "https://persim.scikit-tda.org";
|
|
|
|
|
license = licenses.mit;
|
|
|
|
|
maintainers = [ maintainers.costrouc ];
|
|
|
|
|
};
|
|
|
|
|
}
|
