2020-04-24 23:36:52 +00:00
|
|
|
# This file is generated from generate-r-packages.R. DO NOT EDIT.
|
|
|
|
# Execute the following command to update the file.
|
|
|
|
#
|
|
|
|
# Rscript generate-r-packages.R bioc-experiment >new && mv new bioc-experiment-packages.nix
|
|
|
|
|
|
|
|
{ self, derive }:
|
2022-12-28 21:21:41 +00:00
|
|
|
let derive2 = derive { biocVersion = "3.16"; };
|
2020-04-24 23:36:52 +00:00
|
|
|
in with self; {
|
2022-12-28 21:21:41 +00:00
|
|
|
ALL = derive2 { name="ALL"; version="1.40.0"; sha256="1klf604g4m0g6y12swqz9f8gc20k0c79sxzj7zk6v4jadi1fhsqw"; depends=[Biobase]; };
|
|
|
|
ALLMLL = derive2 { name="ALLMLL"; version="1.38.0"; sha256="1r6ny7v9q4h6gx7i28rp9w7a120ln9kd77a4ygiiy92s9d5qi6xn"; depends=[affy]; };
|
|
|
|
ARRmData = derive2 { name="ARRmData"; version="1.34.0"; sha256="1c48gfb5h0chfs205hgl5gfb1rlsz355cv5xq0acj9cvzwv25sh6"; depends=[]; };
|
|
|
|
ASICSdata = derive2 { name="ASICSdata"; version="1.18.0"; sha256="0s2zfa42yfx5mcbngp979fca6afszxgflrzhn7spry4y071xvkvb"; depends=[]; };
|
|
|
|
Affyhgu133A2Expr = derive2 { name="Affyhgu133A2Expr"; version="1.34.0"; sha256="1bkzak8pwdz23isrfvw71y3y0jbmy11v50wg4z4xhwp0fhfk21fw"; depends=[]; };
|
|
|
|
Affyhgu133Plus2Expr = derive2 { name="Affyhgu133Plus2Expr"; version="1.32.0"; sha256="1vvcia75d4n29kph83pi0ihrkjfl2jb46qvwzrhjyccxp1l16bvc"; depends=[]; };
|
|
|
|
Affyhgu133aExpr = derive2 { name="Affyhgu133aExpr"; version="1.36.0"; sha256="03dsz3wzxrxykq4km8787n6082i1r140s4afw6r3m29yfk02rqfy"; depends=[]; };
|
|
|
|
AffymetrixDataTestFiles = derive2 { name="AffymetrixDataTestFiles"; version="0.36.0"; sha256="15dddf2kzcdpvmskszsyxb9i613632d0dfjfv01mlbmvd4q0h20s"; depends=[]; };
|
|
|
|
Affymoe4302Expr = derive2 { name="Affymoe4302Expr"; version="1.36.0"; sha256="125firpilbi9xlb61cp641g972cwqd23p9vrpczicjw6dm6mh5km"; depends=[]; };
|
|
|
|
AmpAffyExample = derive2 { name="AmpAffyExample"; version="1.38.0"; sha256="0v2r91h6ydzyrcn4ryhrd5q0p5dlq6w1alcfbbk43nvmjqidm2r3"; depends=[affy]; };
|
|
|
|
AneuFinderData = derive2 { name="AneuFinderData"; version="1.26.0"; sha256="01g4g0sz46psi86792fqyazr6vzbcrcrhzw2k9k94cawppnlfnwh"; depends=[]; };
|
|
|
|
AshkenazimSonChr21 = derive2 { name="AshkenazimSonChr21"; version="1.28.0"; sha256="109qzyjhvmpm0q6ghfvsmrrskvjd6djlki7kn63jfsfqphx1v7db"; depends=[]; };
|
|
|
|
AssessORFData = derive2 { name="AssessORFData"; version="1.16.0"; sha256="092f1nivs9xvibbs380ahwfx3f7msnbbb62bj94ihs2swsq7b1y8"; depends=[DECIPHER]; };
|
|
|
|
BeadArrayUseCases = derive2 { name="BeadArrayUseCases"; version="1.36.0"; sha256="079qj26622s9jb2kw1wpd5bjihmj3a9mif4y86zjna7jm1jdvzv8"; depends=[beadarray GEOquery limma]; };
|
|
|
|
BeadSorted_Saliva_EPIC = derive2 { name="BeadSorted.Saliva.EPIC"; version="1.6.0"; sha256="0mh10sg95djkzp9w7bjr4ggy86a0pakfi2008fk4xikjc3q7ky24"; depends=[ExperimentHub minfi]; };
|
|
|
|
BioImageDbs = derive2 { name="BioImageDbs"; version="1.6.0"; sha256="0r4m5qchzglpx4dn95ss0xfd3cqd7vxafjg869y8fxpayjn11dqg"; depends=[animation AnnotationHub EBImage einsum ExperimentHub filesstrings magick magrittr markdown rmarkdown]; };
|
|
|
|
BioPlex = derive2 { name="BioPlex"; version="1.4.2"; sha256="091d9gywkkbgd922sgqqqnj20sjnrsarqrhqbw99x9ccnfzqr2jn"; depends=[BiocFileCache GenomeInfoDb GenomicRanges GEOquery graph SummarizedExperiment]; };
|
|
|
|
BloodCancerMultiOmics2017 = derive2 { name="BloodCancerMultiOmics2017"; version="1.18.0"; sha256="1284qhij9663b382aq4nq3zl3jjsj5gdh3bfqj6sjfvbvx4pmcpg"; depends=[beeswarm Biobase DESeq2 devtools dplyr ggdendro ggplot2 glmnet gtable ipflasso RColorBrewer reshape2 scales SummarizedExperiment survival tibble]; };
|
|
|
|
CCl4 = derive2 { name="CCl4"; version="1.36.0"; sha256="09zja5jzz7lh11cyjvczfgic8z4bq35j6f63irwwizxvp861w902"; depends=[Biobase limma]; };
|
|
|
|
CLL = derive2 { name="CLL"; version="1.38.0"; sha256="109sspddzqg08gqf5xacf2vbjs672i2d3n6a6wzr8isdyar40xx1"; depends=[affy Biobase]; };
|
|
|
|
CLLmethylation = derive2 { name="CLLmethylation"; version="1.18.0"; sha256="0xagl4f5cn9wax4jjh4csfd4p53ljnh09b063rk8dqm7adr2c788"; depends=[ExperimentHub SummarizedExperiment]; };
|
|
|
|
COHCAPanno = derive2 { name="COHCAPanno"; version="1.34.0"; sha256="0fps1b4kfhv4n1gm3yqspjbrh6gnq8hl1q2apzb1ir1gnfm28ird"; depends=[]; };
|
|
|
|
CONFESSdata = derive2 { name="CONFESSdata"; version="1.26.0"; sha256="03dyzdj79377srmcxh3fc0z321g3mkcp88lknwndw1xa44n2hqd5"; depends=[]; };
|
|
|
|
COPDSexualDimorphism_data = derive2 { name="COPDSexualDimorphism.data"; version="1.34.0"; sha256="05m5288ilcisifnhkq6vdgrchhkp21nc8kmdm7kdszl9d4xrj7mq"; depends=[]; };
|
|
|
|
COSMIC_67 = derive2 { name="COSMIC.67"; version="1.34.0"; sha256="0ga0islkm9m4qry37qkw8z0zs7amqky7fy0i418k9gn0ba06xd0s"; depends=[GenomicRanges SummarizedExperiment VariantAnnotation]; };
|
|
|
|
CRCL18 = derive2 { name="CRCL18"; version="1.18.0"; sha256="0515xmrbhvkw8zk62ivyzlr8p0mmmqbayy73vdwzz3a5gd3zh7zl"; depends=[Biobase]; };
|
|
|
|
CardinalWorkflows = derive2 { name="CardinalWorkflows"; version="1.30.0"; sha256="17hwxp251ghwmlywa7rxvlj0m3fqdf3pm57m0rfxnda0izx6xvk2"; depends=[Cardinal]; };
|
|
|
|
CellMapperData = derive2 { name="CellMapperData"; version="1.24.0"; sha256="192jaz5fss0bz64jn52c7lnj81ih89dhrz6pjkyllsh8ffvqb067"; depends=[CellMapper ExperimentHub]; };
|
|
|
|
ChAMPdata = derive2 { name="ChAMPdata"; version="2.30.0"; sha256="0rz762szfl02h4d3dj7ckd41ji9mdsja8nxqw6fl086z337041zw"; depends=[BiocGenerics GenomicRanges]; };
|
|
|
|
ChIC_data = derive2 { name="ChIC.data"; version="1.18.0"; sha256="1ii43y280mqb0csa3g7xrw3aj1lsl4rk1hnakg27jnjk7c36jg0c"; depends=[caret genomeIntervals randomForest]; };
|
|
|
|
ChIPXpressData = derive2 { name="ChIPXpressData"; version="1.36.0"; sha256="049y1mvf7d1ajqnk1hs72ak41j16dz2zhsmq3b6817a4frrnmb0a"; depends=[bigmemory]; };
|
|
|
|
ChIPexoQualExample = derive2 { name="ChIPexoQualExample"; version="1.22.0"; sha256="1jgvf953b3pmkri02avajmqx7p0ylljdl4v2qiwvxi0gxzlb2qwn"; depends=[]; };
|
|
|
|
ChimpHumanBrainData = derive2 { name="ChimpHumanBrainData"; version="1.36.0"; sha256="1jlm1l5vkk18r0y5jk0rz8a30f71cpzq5wimff4xnka30zkk83r9"; depends=[affy hexbin limma qvalue statmod]; };
|
|
|
|
CluMSIDdata = derive2 { name="CluMSIDdata"; version="1.14.0"; sha256="0qnhs5kvf9a1vsg1y4ky6cb0awnf9fj6n4n37yz9ss7dl3rpn3qk"; depends=[]; };
|
|
|
|
ConnectivityMap = derive2 { name="ConnectivityMap"; version="1.34.0"; sha256="0f7spc4l9y8hrv6fscgxj9fy9hnqm9h8r4nya97jzbwryj9yzm2s"; depends=[]; };
|
|
|
|
CopyNeutralIMA = derive2 { name="CopyNeutralIMA"; version="1.16.0"; sha256="0s3fp0pblwpf8g1ply64n9kq41mn59gyf1wh9lncks8sfxdk1h0a"; depends=[ExperimentHub Rdpack]; };
|
|
|
|
CopyhelpeR = derive2 { name="CopyhelpeR"; version="1.30.0"; sha256="19yqcvfji8263wdcqmjbmmz2xzi0nl9d4jdwsqrvv6ja5pqm2l7w"; depends=[]; };
|
|
|
|
DAPARdata = derive2 { name="DAPARdata"; version="1.28.0"; sha256="0ix3z12g2xff16bkiynly8y75ygrapv65p1ml9z7p4ap04rd718v"; depends=[MSnbase]; };
|
|
|
|
DExMAdata = derive2 { name="DExMAdata"; version="1.6.0"; sha256="16k017y3bf0z3h05gldb611hl10vqllyl5346nnpmw8pqihcq5by"; depends=[Biobase]; };
|
|
|
|
DLBCL = derive2 { name="DLBCL"; version="1.38.0"; sha256="1adzmfk67xl3lqlhkbb6r2kkprkbjwb6n77ynj4mx6gi4b3s8b2n"; depends=[Biobase]; };
|
|
|
|
DMRcatedata = derive2 { name="DMRcatedata"; version="2.16.0"; sha256="1p67kw8l8367rkn72wjlsdc4gw1cbpi8w928dmpa1x833ypfpkc6"; depends=[ExperimentHub GenomicFeatures Gviz IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylationEPICanno_ilm10b4_hg19 plyr readxl rtracklayer]; };
|
|
|
|
DeSousa2013 = derive2 { name="DeSousa2013"; version="1.34.0"; sha256="0zk9z0bmn15wsrscdh30cxps1c5qi06xhzbvl8v2lals6hxqgixz"; depends=[affy AnnotationDbi Biobase cluster ConsensusClusterPlus frma frmaTools gplots hgu133plus2_db hgu133plus2frmavecs pamr rgl ROCR siggenes survival sva]; };
|
|
|
|
DmelSGI = derive2 { name="DmelSGI"; version="1.30.0"; sha256="1isn7ay22dpvnsdjlmanfj7pdqnim4dcrq2rf8dflydgjq6hc06k"; depends=[abind gplots igraph knitr limma rhdf5 TSP]; };
|
|
|
|
DonaPLLP2013 = derive2 { name="DonaPLLP2013"; version="1.36.0"; sha256="1xq303q0wmrk73band29yfpb8dacg6187qxpr3pqacksj3dsp70m"; depends=[EBImage]; };
|
|
|
|
DropletTestFiles = derive2 { name="DropletTestFiles"; version="1.8.0"; sha256="1yzq3yddqv06j1j3wpw92ydsgi2k67dirvjn7127iwpp865hs12r"; depends=[AnnotationHub ExperimentHub S4Vectors]; };
|
|
|
|
DrugVsDiseasedata = derive2 { name="DrugVsDiseasedata"; version="1.34.0"; sha256="1j8mnkk71w2wp18wp65z2rwj4ql5s6pqggv2rd02l0jq9n89w8wl"; depends=[]; };
|
|
|
|
DuoClustering2018 = derive2 { name="DuoClustering2018"; version="1.16.0"; sha256="0dha80wlb9w1brq22lfmcm267axkm56pwfxcd1szbsg3w2fv3wrn"; depends=[dplyr ExperimentHub ggplot2 ggthemes magrittr mclust purrr reshape2 tidyr viridis]; };
|
|
|
|
DvDdata = derive2 { name="DvDdata"; version="1.34.0"; sha256="1x22s36aq8ppyphc58gsd5s7chkkkf6dhand39c8b9npybx9rx8d"; depends=[]; };
|
|
|
|
EGSEAdata = derive2 { name="EGSEAdata"; version="1.26.0"; sha256="0df556k4wbwmn8cjpfq38c3mxicncz2j4f9f7xxsj5gjd2ww2p2r"; depends=[]; };
|
|
|
|
ELMER_data = derive2 { name="ELMER.data"; version="2.22.0"; sha256="1603g55jkdq3f66xp84cj7x3f7bgw2s4bhscyjvb1hagcnwg48lf"; depends=[GenomicRanges]; };
|
|
|
|
EatonEtAlChIPseq = derive2 { name="EatonEtAlChIPseq"; version="0.36.0"; sha256="1bpm8ds36iydbd4nv5ifrp8spdlx21k14dx18awm61d9wzg6fk1p"; depends=[GenomicRanges rtracklayer ShortRead]; };
|
|
|
|
EpiMix_data = derive2 { name="EpiMix.data"; version="1.0.0"; sha256="1n65fyq8syiaix876ll1zjjx5cm9k63p92x9by6xbpv1xqmqbpzz"; depends=[ExperimentHub]; };
|
|
|
|
FANTOM3and4CAGE = derive2 { name="FANTOM3and4CAGE"; version="1.34.0"; sha256="06fqm4rj5c6l1aynvz3xqv9lk8w1s57m9ncfb2729sgyp7zg64pp"; depends=[]; };
|
|
|
|
FIs = derive2 { name="FIs"; version="1.26.0"; sha256="13f8q3gjgbbycp6g81jr5aq5w759mhs4niacqbzmfa5bksvsmlmn"; depends=[]; };
|
|
|
|
FieldEffectCrc = derive2 { name="FieldEffectCrc"; version="1.8.0"; sha256="0bcsvgjr03z5r2xxlzrzcpqw0vqh0vfghrwlsismxp8dp46kjr25"; depends=[AnnotationHub BiocStyle DESeq2 ExperimentHub RUnit SummarizedExperiment]; };
|
|
|
|
Fletcher2013a = derive2 { name="Fletcher2013a"; version="1.34.0"; sha256="1dgqhgmzhfnwyjr1wcz41ggri8i63d9b4malr1izd8gnh9c80an3"; depends=[Biobase gplots limma VennDiagram]; };
|
|
|
|
Fletcher2013b = derive2 { name="Fletcher2013b"; version="1.34.0"; sha256="1hhsyk98q23j2d5y4l4kj15vypms9yn7skw3wcxmwl95cgdwzb9s"; depends=[Fletcher2013a igraph RColorBrewer RedeR RTN]; };
|
|
|
|
FlowSorted_Blood_450k = derive2 { name="FlowSorted.Blood.450k"; version="1.36.0"; sha256="1ha9qsp5g3g2yhnk574x6xhg95bb29ywvmg3ns1c50z69v6wbraq"; depends=[minfi]; };
|
|
|
|
FlowSorted_Blood_EPIC = derive2 { name="FlowSorted.Blood.EPIC"; version="2.2.0"; sha256="1vybj69jxnirqg6ik03q3pb1vv23z8mir7wpi2ys7iljf5ixzgl1"; depends=[AnnotationHub ExperimentHub genefilter minfi nlme quadprog S4Vectors SummarizedExperiment]; };
|
|
|
|
FlowSorted_CordBlood_450k = derive2 { name="FlowSorted.CordBlood.450k"; version="1.26.0"; sha256="08wyfv2z8xcmany5m9lpz3lv7ql4qq95vb14fvq7bmhy1ahbr9by"; depends=[minfi]; };
|
|
|
|
FlowSorted_CordBloodCombined_450k = derive2 { name="FlowSorted.CordBloodCombined.450k"; version="1.14.0"; sha256="062dk56shf41qdd4wm8g8vgbcg1bpj24v9x7q4kvb2cmcqyr233s"; depends=[AnnotationHub ExperimentHub IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylationEPICanno_ilm10b4_hg19 minfi SummarizedExperiment]; };
|
|
|
|
FlowSorted_CordBloodNorway_450k = derive2 { name="FlowSorted.CordBloodNorway.450k"; version="1.24.0"; sha256="0c6v5cxw3xy0zlw3dlfx5gwijlkwmq4m2irg04j9fng90zm2kmh2"; depends=[minfi]; };
|
|
|
|
FlowSorted_DLPFC_450k = derive2 { name="FlowSorted.DLPFC.450k"; version="1.34.0"; sha256="0nchavb8jwkp7jpf5nkfdzavjqjsr7d9g3cll7w2zczgz00ysfij"; depends=[minfi]; };
|
|
|
|
GIGSEAdata = derive2 { name="GIGSEAdata"; version="1.16.0"; sha256="0ryrsmjsvv02p9zrcw6h45c8hrq6pvg3r18j3jbcsz069awsy9ik"; depends=[]; };
|
|
|
|
GSBenchMark = derive2 { name="GSBenchMark"; version="1.18.0"; sha256="0n1ag0a34hfrfrnnzdd6n2dk05hxrpgr9mfnxlnyffcn36fv7fwv"; depends=[]; };
|
|
|
|
GSE103322 = derive2 { name="GSE103322"; version="1.4.0"; sha256="148p24hh7j07ny2jxwnvk5lq6313xmaqmn80amv1qvf78wfnf3bf"; depends=[Biobase GEOquery]; };
|
|
|
|
GSE13015 = derive2 { name="GSE13015"; version="1.6.0"; sha256="1r3w675f53n0z6ii6xlsahyg33mc0zmcsirgp2nb4ab6r22y36sa"; depends=[Biobase GEOquery preprocessCore SummarizedExperiment]; };
|
|
|
|
GSE159526 = derive2 { name="GSE159526"; version="1.4.0"; sha256="125q8bl3qaf8lnadqh96g651y8ydkcsg8szcni1rjsnw6hhqasxm"; depends=[]; };
|
|
|
|
GSE62944 = derive2 { name="GSE62944"; version="1.26.0"; sha256="1d3zyyir01i4isqbk1sjy1d0jkrjqiyciyqqklhigk1jyk4irpvj"; depends=[Biobase GEOquery]; };
|
|
|
|
GSVAdata = derive2 { name="GSVAdata"; version="1.34.0"; sha256="009y1ywfb11d9yrqnknjgynpm732fixrg8xk49ggf1m0r8qd7p0k"; depends=[Biobase GSEABase hgu95a_db]; };
|
|
|
|
GWASdata = derive2 { name="GWASdata"; version="1.36.0"; sha256="0nibj1n8gqzrrfpggryfl80zk68hf3a3n4ndjqi9rnn5kl9aw5b6"; depends=[GWASTools]; };
|
|
|
|
GenomicDistributionsData = derive2 { name="GenomicDistributionsData"; version="1.6.0"; sha256="1ascrsvildfcp4kqzy9zdx97dyqkdl8nhkv356sqy6scd4fdjknf"; depends=[AnnotationFilter AnnotationHub BSgenome data_table ensembldb ExperimentHub GenomeInfoDb GenomicFeatures GenomicRanges]; };
|
|
|
|
GeuvadisTranscriptExpr = derive2 { name="GeuvadisTranscriptExpr"; version="1.26.0"; sha256="0mkzaqsqqyn9d4z3cgr10csimqklxqvymsjphn05m8d5dhfzcwn7"; depends=[]; };
|
|
|
|
HCAData = derive2 { name="HCAData"; version="1.14.0"; sha256="14734jlxq0l3l3187frw40qfsgx7cv04hxl772wvaahnd8wmga9z"; depends=[AnnotationHub ExperimentHub HDF5Array SingleCellExperiment]; };
|
|
|
|
HD2013SGI = derive2 { name="HD2013SGI"; version="1.38.0"; sha256="0i2sv80qw3svk8kl8yrg4n6mxjw589fz0kpqn9hbaj07z57g7rb5"; depends=[EBImage geneplotter gplots limma LSD RColorBrewer splots vcd]; };
|
|
|
|
HDCytoData = derive2 { name="HDCytoData"; version="1.18.0"; sha256="1fn8q6ds10z3ymdarkfyh88pcqnrry9yhzammp84vf86f0bl8mrc"; depends=[ExperimentHub flowCore SummarizedExperiment]; };
|
|
|
|
HEEBOdata = derive2 { name="HEEBOdata"; version="1.36.0"; sha256="1jm0i9d6vwbhp7xxy571n0c4gc8zga0vividkkk5wkr3mzc00qm6"; depends=[]; };
|
|
|
|
HIVcDNAvantWout03 = derive2 { name="HIVcDNAvantWout03"; version="1.38.0"; sha256="0yf0xwkjhb6inxpxy2r258zkqmx286v7d0hcrp9s2jy1jxsvzyrg"; depends=[]; };
|
|
|
|
HMP16SData = derive2 { name="HMP16SData"; version="1.18.0"; sha256="1zp5s3c95nkq4ngm6v96wah4h1y47pgwxpg1x8w0ysjiswjag74f"; depends=[AnnotationHub assertthat dplyr ExperimentHub kableExtra knitr magrittr readr S4Vectors stringr SummarizedExperiment tibble]; };
|
|
|
|
HMP2Data = derive2 { name="HMP2Data"; version="1.12.0"; sha256="1m57kd35m7j8jvai5lh252433s14fn181vpm4bz38wqh4dj41qhs"; depends=[AnnotationHub assertthat data_table dplyr ExperimentHub kableExtra knitr magrittr MultiAssayExperiment phyloseq readr S4Vectors SummarizedExperiment]; };
|
|
|
|
HSMMSingleCell = derive2 { name="HSMMSingleCell"; version="1.18.0"; sha256="0ir4vd88p0pfh4sbsks65dijxadxj2xdc5rrjznvchj39ia48lp9"; depends=[]; };
|
|
|
|
HarmanData = derive2 { name="HarmanData"; version="1.26.0"; sha256="17gl8j02gnninbq386b7jmbnai77hg3w78lvikcm1450mlk1vkk3"; depends=[]; };
|
|
|
|
HarmonizedTCGAData = derive2 { name="HarmonizedTCGAData"; version="1.20.0"; sha256="07gh5gfzprdvv0cif999k2v8rijhjqsyw6yrmn6mf2hyf7hc09r1"; depends=[ExperimentHub]; };
|
|
|
|
HelloRangesData = derive2 { name="HelloRangesData"; version="1.24.0"; sha256="01mdjz9l6fnzd4yz31xyhraqczd64dsay37pqmc1w9kd9934sfrm"; depends=[]; };
|
|
|
|
HiCDataHumanIMR90 = derive2 { name="HiCDataHumanIMR90"; version="1.18.0"; sha256="0l9v1hycb47cjmk1k1b8vvry7amqgl74l72qigznx9h64dl0vqpc"; depends=[]; };
|
|
|
|
HiCDataLymphoblast = derive2 { name="HiCDataLymphoblast"; version="1.34.0"; sha256="1il9j759bw6h84v9ap1wf5fvn4i34nhdn0rb9flls1xbrmi1bsl6"; depends=[]; };
|
|
|
|
HiContactsData = derive2 { name="HiContactsData"; version="1.0.0"; sha256="1hp46qr1abllmqqimgk8lp2fb7mfb9zc9kqcfzc8fx7jbyxsqj7q"; depends=[AnnotationHub BiocFileCache ExperimentHub]; };
|
|
|
|
HighlyReplicatedRNASeq = derive2 { name="HighlyReplicatedRNASeq"; version="1.10.0"; sha256="1v6qd15k36ynmy45kd5rg7rfs9xp054jgbwksxc0hz3v50nqjl6w"; depends=[ExperimentHub S4Vectors SummarizedExperiment]; };
|
|
|
|
Hiiragi2013 = derive2 { name="Hiiragi2013"; version="1.34.0"; sha256="0a87ldx5hwlvk64ynd4jm0mf3sbn2yxq2d87c9gwpcc471jglqn6"; depends=[affy Biobase boot clue cluster genefilter geneplotter gplots gtools KEGGREST lattice latticeExtra MASS mouse4302_db RColorBrewer xtable]; };
|
|
|
|
HumanAffyData = derive2 { name="HumanAffyData"; version="1.24.0"; sha256="0sbxl4jh697220888ssi825iiakzj94m4k871lg42xn22d7991wc"; depends=[Biobase ExperimentHub]; };
|
|
|
|
IHWpaper = derive2 { name="IHWpaper"; version="1.26.0"; sha256="01p50lcybzr8bk7hdzmi71bwwy51xan5wba2ppis6z68gjvyn4hf"; depends=[Biobase BiocGenerics BiocParallel cowplot DESeq2 dplyr fdrtool genefilter ggplot2 IHW qvalue Rcpp SummarizedExperiment]; };
|
|
|
|
ITALICSData = derive2 { name="ITALICSData"; version="2.36.0"; sha256="09d2igic3b5p7wpq98hb2lffxm1nfq9mwmnqlbdn3jv49pgz3hmw"; depends=[]; };
|
|
|
|
Illumina450ProbeVariants_db = derive2 { name="Illumina450ProbeVariants.db"; version="1.34.0"; sha256="1c1iqxi17s1a1sa1vab2ma7pjq1dxal7ibsiahj66ys0pa4sm42p"; depends=[]; };
|
|
|
|
IlluminaDataTestFiles = derive2 { name="IlluminaDataTestFiles"; version="1.36.0"; sha256="0xsnp9bxsmsrqnlshd0g8smqmianlna8vapln96ix47mjj0hcq9c"; depends=[]; };
|
|
|
|
Iyer517 = derive2 { name="Iyer517"; version="1.40.0"; sha256="0y8a5rsnk0m6x4sfp8fnc7c54fv3pwsps19h4hfs0qxzvxzzjrf3"; depends=[Biobase]; };
|
|
|
|
JASPAR2014 = derive2 { name="JASPAR2014"; version="1.34.0"; sha256="0g95w9fk7rjn39xqcpyxx87mzizrkmpmrh76msgkmwpmdvjz6hkh"; depends=[Biostrings]; };
|
|
|
|
JASPAR2016 = derive2 { name="JASPAR2016"; version="1.26.0"; sha256="1y60fslisdxwm27g0sjzjg6r5qf8bjp4hyb1k2plxpdarvl7jzqf"; depends=[]; };
|
|
|
|
KEGGandMetacoreDzPathwaysGEO = derive2 { name="KEGGandMetacoreDzPathwaysGEO"; version="1.18.0"; sha256="0x582iygpw580i8afdxw41jn7gv6mp0hcy9mx8n75nkknvzs4w0g"; depends=[Biobase BiocGenerics]; };
|
|
|
|
KEGGdzPathwaysGEO = derive2 { name="KEGGdzPathwaysGEO"; version="1.36.0"; sha256="09syk5d39blzzi1z8l8w1ia8ahrxhrwync7kmlwnvssbd5q1q0rd"; depends=[Biobase BiocGenerics]; };
|
|
|
|
KOdata = derive2 { name="KOdata"; version="1.24.0"; sha256="1kclj56823bc9mn8r3khwfwak342ja69afcmllfg2cfr4al6ikgh"; depends=[]; };
|
|
|
|
LRcellTypeMarkers = derive2 { name="LRcellTypeMarkers"; version="1.6.0"; sha256="0r0p7v482d9r06cwgqy23la238dff9ga70iap7wyhn8xdfcp7rfm"; depends=[ExperimentHub]; };
|
|
|
|
LiebermanAidenHiC2009 = derive2 { name="LiebermanAidenHiC2009"; version="0.36.0"; sha256="03vgrpgw3sqfrvbgm7r6avwkl85qmxl4fy0r92ikh8wr6waw7a62"; depends=[IRanges KernSmooth]; };
|
|
|
|
ListerEtAlBSseq = derive2 { name="ListerEtAlBSseq"; version="1.30.0"; sha256="1733sz2qhkrvalx0vk7xa2plddz40psfmnfpq3zkf6v4i1cvnvmx"; depends=[methylPipe]; };
|
|
|
|
LungCancerACvsSCCGEO = derive2 { name="LungCancerACvsSCCGEO"; version="1.34.0"; sha256="10fbjpk50nqpm91r9fw94q8dqcz1jg4smbjjx2nbwvl1qzzr1qpj"; depends=[]; };
|
|
|
|
LungCancerLines = derive2 { name="LungCancerLines"; version="0.36.0"; sha256="053zb04n45mypnaws2g4id6pzlbmgdzwrg7x3i6gcw566vdai82n"; depends=[Rsamtools]; };
|
|
|
|
M3DExampleData = derive2 { name="M3DExampleData"; version="1.24.0"; sha256="0cmgb0qx78awjx6gcf5nyd7am0p86ga9l7ps8h8z9llr0d0yr0hc"; depends=[]; };
|
|
|
|
MACSdata = derive2 { name="MACSdata"; version="1.6.0"; sha256="04pimm8g4m2mahrpdwc45l1cnsg8h0737qh932k9g9740pmhv1pd"; depends=[]; };
|
|
|
|
MAQCsubset = derive2 { name="MAQCsubset"; version="1.36.0"; sha256="0k40plz86v4bwcwny0zd3icq4zjqfglbnrk957bvbsgacjag87cq"; depends=[affy Biobase lumi]; };
|
|
|
|
MAQCsubsetILM = derive2 { name="MAQCsubsetILM"; version="1.36.0"; sha256="1vr0avq39p8hg5zzx6fy1n9p4anvlcjbngkhiq6nprmp2s8064vg"; depends=[Biobase lumi]; };
|
|
|
|
MEDIPSData = derive2 { name="MEDIPSData"; version="1.34.0"; sha256="1h9dhirmq30j9jds21f1a3jvijy9z0mp9j08phd79sallkcvsqna"; depends=[]; };
|
|
|
|
MEEBOdata = derive2 { name="MEEBOdata"; version="1.36.0"; sha256="0klm6xv25g3x7yf814l1jbi16cknb2xbh6yn1cx9a0p3rgm49j1l"; depends=[]; };
|
|
|
|
MIGSAdata = derive2 { name="MIGSAdata"; version="1.22.0"; sha256="01sz73h1xkqck6d0yliy2i4nx0v980bxm30y7rn6g3nxw9qs5q1m"; depends=[]; };
|
|
|
|
MMAPPR2data = derive2 { name="MMAPPR2data"; version="1.12.0"; sha256="1k5ay043ys2npmmb2mk01cpdxvl1ccysl5bw5aj9d2h7mixxfc27"; depends=[Rsamtools]; };
|
|
|
|
MMDiffBamSubset = derive2 { name="MMDiffBamSubset"; version="1.34.0"; sha256="0hnvjsbj6iaaaqslgfnqzlk59q6fmyzsjbscqvl2pfdiliy2mkix"; depends=[]; };
|
|
|
|
MOFAdata = derive2 { name="MOFAdata"; version="1.14.0"; sha256="141rvb3ra457hgc8hhskc4j6xl6k7f13amrlrw5nvx4n77wfsv8b"; depends=[]; };
|
|
|
|
MSMB = derive2 { name="MSMB"; version="1.16.0"; sha256="0rz9cvpsnq0lnbahnpsbdxwcvh6z7id3lrzcr2bcxvnkj4ah95q4"; depends=[tibble]; };
|
|
|
|
MUGAExampleData = derive2 { name="MUGAExampleData"; version="1.18.0"; sha256="1f2zsy950rn437cgqpai5nlchpza100sf2acqdq8cyqiq4ip7q8j"; depends=[]; };
|
|
|
|
MerfishData = derive2 { name="MerfishData"; version="1.0.0"; sha256="0jcq6n0x57i11c793alj3kj813vs37fmi01z5yl1lsx41cgflpll"; depends=[AnnotationHub BumpyMatrix EBImage ExperimentHub S4Vectors SpatialExperiment SummarizedExperiment]; };
|
|
|
|
MetaGxBreast = derive2 { name="MetaGxBreast"; version="1.18.0"; sha256="0wjgk3j9r6shk7ava3isdyiihdf7b9dz701jkv3nhg87x3nhvwfh"; depends=[AnnotationHub Biobase ExperimentHub impute lattice SummarizedExperiment]; };
|
|
|
|
MetaGxOvarian = derive2 { name="MetaGxOvarian"; version="1.18.0"; sha256="0miznxb2d7smfzcyddhx64lip9xxn4bcq7x2f9fn9047qfky0w9i"; depends=[AnnotationHub Biobase ExperimentHub impute lattice SummarizedExperiment]; };
|
|
|
|
MetaGxPancreas = derive2 { name="MetaGxPancreas"; version="1.18.0"; sha256="1icm9y4x2qglp9gy66j71ngn61snbxy3gz3m6mdgj2vw02f93xif"; depends=[AnnotationHub ExperimentHub impute S4Vectors SummarizedExperiment]; };
|
|
|
|
MethylAidData = derive2 { name="MethylAidData"; version="1.30.0"; sha256="0j53ilxqvl7gaplkmrslz1ywm3fybqyri2psdr5c34kay7j50sng"; depends=[MethylAid]; };
|
|
|
|
MethylSeqData = derive2 { name="MethylSeqData"; version="1.8.0"; sha256="0rfl5xz23kbvjxf2sf25j526a8252dvd6zmg4x9pj7fqyf7yvfdd"; depends=[ExperimentHub GenomeInfoDb GenomicRanges HDF5Array IRanges rhdf5 S4Vectors SummarizedExperiment]; };
|
|
|
|
MicrobiomeBenchmarkData = derive2 { name="MicrobiomeBenchmarkData"; version="1.0.0"; sha256="06m0yi3379g8kvhs0amcc9r5d0np9xwq2a85vk8iz3xi6sqbbbzj"; depends=[ape BiocFileCache S4Vectors SummarizedExperiment TreeSummarizedExperiment]; };
|
|
|
|
MouseGastrulationData = derive2 { name="MouseGastrulationData"; version="1.12.0"; sha256="0icgs53mfaiary8gjifasjalc9942fr876w61bxssdg7v4jn76ss"; depends=[BiocGenerics BumpyMatrix ExperimentHub S4Vectors SingleCellExperiment SpatialExperiment SummarizedExperiment]; };
|
|
|
|
MouseThymusAgeing = derive2 { name="MouseThymusAgeing"; version="1.6.0"; sha256="0y5xibhd5w37ks3fvn6gsgqd5whxvg1rbd4li2ank0v56mvazfij"; depends=[BiocGenerics ExperimentHub S4Vectors SingleCellExperiment SummarizedExperiment]; };
|
|
|
|
NCIgraphData = derive2 { name="NCIgraphData"; version="1.34.0"; sha256="0sismlawhq1dz29v1532x5ha1n2pdv2fa43kzma4xdf1vafj5ham"; depends=[]; };
|
|
|
|
NGScopyData = derive2 { name="NGScopyData"; version="1.18.0"; sha256="1w3hpmqf6030smwb4r61czwz0qsr2kz8z11q8z8819bj0czvr32x"; depends=[]; };
|
|
|
|
NanoporeRNASeq = derive2 { name="NanoporeRNASeq"; version="1.8.0"; sha256="0k548ib7yi29xcs2c0y46c3vwi6fkqsp3njwbn4acm85pr93z54g"; depends=[ExperimentHub]; };
|
|
|
|
NestLink = derive2 { name="NestLink"; version="1.14.0"; sha256="0qk0c506j2gwp25hyqriii7cwh1h2rbvhahm1akxvr4j1v2pk01l"; depends=[AnnotationHub Biostrings ExperimentHub gplots protViz ShortRead]; };
|
|
|
|
NetActivityData = derive2 { name="NetActivityData"; version="1.0.0"; sha256="12h25q7vp23rac1d3lgf99fclj2h3615bkxfhy117971i4n2z4i4"; depends=[]; };
|
|
|
|
Neve2006 = derive2 { name="Neve2006"; version="0.36.0"; sha256="0i7l60ys7mnqllx30r6g8jif460z90j8cw59jv13hbym5dhdk4bi"; depends=[annotate Biobase hgu133a_db]; };
|
|
|
|
NxtIRFdata = derive2 { name="NxtIRFdata"; version="1.4.0"; sha256="1k0krkmp13l9w6jwidc1snm5z11g3wgw2pmp9jzsxyxjimha0vh2"; depends=[BiocFileCache ExperimentHub R_utils rtracklayer]; };
|
|
|
|
OMICsPCAdata = derive2 { name="OMICsPCAdata"; version="1.16.0"; sha256="16jyvgj9rcinsjixczwq6rw8wpl0lxyf7h5sajf47306nxx5w073"; depends=[MultiAssayExperiment]; };
|
|
|
|
ObMiTi = derive2 { name="ObMiTi"; version="1.6.0"; sha256="04hcr5ng7gqz6200zvdkfgrw1j3zkvqqh6yn5zsf9q2vwxibxyz5"; depends=[ExperimentHub SummarizedExperiment]; };
|
|
|
|
OnassisJavaLibs = derive2 { name="OnassisJavaLibs"; version="1.20.0"; sha256="1338j9fqcizrfnx7wi97qpsa14yyzy34hb11q3017ry1hkhy28qd"; depends=[rJava]; };
|
|
|
|
PCHiCdata = derive2 { name="PCHiCdata"; version="1.26.0"; sha256="10nlrqsxv655d489fy1vchgi4iw3pfxr6xwhylgcj94nigfy632y"; depends=[Chicago]; };
|
|
|
|
PREDAsampledata = derive2 { name="PREDAsampledata"; version="0.38.0"; sha256="1wmvx2vp8yfz4mx4gmcgvisxp5cn0cf3pznxh01gwiaydpafiskr"; depends=[affy annotate Biobase PREDA]; };
|
|
|
|
PWMEnrich_Dmelanogaster_background = derive2 { name="PWMEnrich.Dmelanogaster.background"; version="4.32.0"; sha256="1bikxs5h6wl8l3l6avgh42h3d8yz1b98s15fggl62gkncaygqfr7"; depends=[PWMEnrich]; };
|
|
|
|
PWMEnrich_Hsapiens_background = derive2 { name="PWMEnrich.Hsapiens.background"; version="4.32.0"; sha256="0ckvjrzr7hqr7lls7z8pdg58k0xpm7hnk8dl2vfy03ddgl7ma34v"; depends=[PWMEnrich]; };
|
|
|
|
PWMEnrich_Mmusculus_background = derive2 { name="PWMEnrich.Mmusculus.background"; version="4.32.0"; sha256="1hwlwkmvkf9q3vi9c7ipr3h6hfrda5xm6gbzv03bmc3pcwwqa2j9"; depends=[PWMEnrich]; };
|
|
|
|
PasillaTranscriptExpr = derive2 { name="PasillaTranscriptExpr"; version="1.26.0"; sha256="0mhb68rm3dmzdpm7x0ffyz9a44fidgr1gxpnwxppslklrnm7g24q"; depends=[]; };
|
|
|
|
PathNetData = derive2 { name="PathNetData"; version="1.34.0"; sha256="131d10id8b93hd7g0z3rl4z8cvv5h5gdi3x636b2z2is821jvnbr"; depends=[]; };
|
|
|
|
PepsNMRData = derive2 { name="PepsNMRData"; version="1.16.0"; sha256="13n9calm3k480sxcgqhvw519m1ss51ysiin7cxhipjfjf8fdnbkb"; depends=[]; };
|
|
|
|
PhyloProfileData = derive2 { name="PhyloProfileData"; version="1.12.0"; sha256="1kpg1a2p6cb4xa7ynlr3wmx7hx1l2xhxccbyqd8mnwn0r52njwmw"; depends=[BiocStyle Biostrings ExperimentHub]; };
|
|
|
|
ProData = derive2 { name="ProData"; version="1.36.0"; sha256="06bmlgwyw4m7cirlvhvsl9qhmczv8rv0aj5ckickwzdcxyig9bjw"; depends=[Biobase]; };
|
|
|
|
PtH2O2lipids = derive2 { name="PtH2O2lipids"; version="1.24.0"; sha256="076q31wxfrxbgyhp4m0d7rxfpi3vvh9950lhcadf92mz6rc39hi0"; depends=[CAMERA LOBSTAHS xcms]; };
|
|
|
|
QDNAseq_hg19 = derive2 { name="QDNAseq.hg19"; version="1.28.0"; sha256="0mszcm31wvzz4sd9909x3ngbd0gdg7iyyxqwmn6ish8f3aj7b5zg"; depends=[QDNAseq]; };
|
|
|
|
QDNAseq_mm10 = derive2 { name="QDNAseq.mm10"; version="1.28.0"; sha256="19i559hx0lbn3m0ihx4wxl8zwskbfwhyzywl8aan165f7snj8has"; depends=[QDNAseq]; };
|
|
|
|
QUBICdata = derive2 { name="QUBICdata"; version="1.26.0"; sha256="1ibffdqc2szj48g6a9ysqwr499bfx706ki0436jwcyxgql2rwbi3"; depends=[]; };
|
|
|
|
RGMQLlib = derive2 { name="RGMQLlib"; version="1.18.0"; sha256="0jsmqibzlclxg4sa73wk63z9l798g1hjl1amjpjy1xb1mn585bhc"; depends=[]; };
|
|
|
|
RITANdata = derive2 { name="RITANdata"; version="1.22.0"; sha256="0wx5i8i5aq6zqrr134fl42a0a97zgrjkmwqh3n2ds5bdn5iylk4g"; depends=[]; };
|
|
|
|
RLHub = derive2 { name="RLHub"; version="1.4.0"; sha256="1gdlg3sfpf2dpkxiaq0m2mmkpyj7v3jqb9paq6ii89l0df2rmrlb"; depends=[AnnotationHub ExperimentHub]; };
|
|
|
|
RMassBankData = derive2 { name="RMassBankData"; version="1.36.0"; sha256="0hkg0w2d8r2r661a7jrpki79ycxnibqwghra4aql9dxqvwrz5qxi"; depends=[]; };
|
|
|
|
RNASeqRData = derive2 { name="RNASeqRData"; version="1.16.0"; sha256="17c5fvyqxdsg7wl0hy0i28z0kf2lmjg36lfrmsv51kzklsc6ykrp"; depends=[]; };
|
|
|
|
RNAinteractMAPK = derive2 { name="RNAinteractMAPK"; version="1.36.0"; sha256="1fpcaqvffb4qrcqs1flvhjggycdxcy93jbj3x5196kz4h9i23fvk"; depends=[Biobase fields gdata genefilter lattice MASS RNAinteract sparseLDA]; };
|
|
|
|
RNAmodR_Data = derive2 { name="RNAmodR.Data"; version="1.12.0"; sha256="1qb753pa6vz4m98s5bqjan70ygqdg4v8jkz440hdq20m2fl54k8w"; depends=[ExperimentHub ExperimentHubData]; };
|
|
|
|
RNAseqData_HNRNPC_bam_chr14 = derive2 { name="RNAseqData.HNRNPC.bam.chr14"; version="0.36.0"; sha256="1w1af68xbpwqmpvvsd1i7jhs4vpxsbn3x277dgg7lgf9gwzsac50"; depends=[]; };
|
|
|
|
RRBSdata = derive2 { name="RRBSdata"; version="1.18.0"; sha256="02j98pnn8pprrx7y1038w5gzb9cw2wf96vryjp17w92k5shv0v5j"; depends=[BiSeq]; };
|
|
|
|
RTCGA_CNV = derive2 { name="RTCGA.CNV"; version="1.26.0"; sha256="0va9ijh2f10c24z0am0rhsdxy0s35cmbsyxfrsysdn56vlz4hprl"; depends=[RTCGA]; };
|
|
|
|
RTCGA_PANCAN12 = derive2 { name="RTCGA.PANCAN12"; version="1.26.0"; sha256="0ha4pz9a85jm74yhp5hylgcs3xkcv81b3h5svcrpzwgz4bb34cny"; depends=[RTCGA]; };
|
|
|
|
RTCGA_RPPA = derive2 { name="RTCGA.RPPA"; version="1.26.0"; sha256="1h0438li369ziwdjvdvyzfnsxrp8sf28xxkxywivy8ihkcq28pxy"; depends=[RTCGA]; };
|
|
|
|
RTCGA_clinical = derive2 { name="RTCGA.clinical"; version="20151101.28.0"; sha256="03qp4h7vks5dra741f795i5pjryh5x2313xx7zy7fz996sd1q7q7"; depends=[RTCGA]; };
|
|
|
|
RTCGA_mRNA = derive2 { name="RTCGA.mRNA"; version="1.26.0"; sha256="1srd8aswa4sgm9k1w0ymd7vcvwlkhb8i075yyh7zs4a4w1jwavh4"; depends=[RTCGA]; };
|
|
|
|
RTCGA_methylation = derive2 { name="RTCGA.methylation"; version="1.26.0"; sha256="0ncgzr3z0yi613ryz2w8lgmyrkzigzfgc6w6jrdgxik3yvkl6b13"; depends=[RTCGA]; };
|
|
|
|
RTCGA_miRNASeq = derive2 { name="RTCGA.miRNASeq"; version="1.26.0"; sha256="0rslg5pmnk5dllvahfjrira8mxg7pfaimnqci3jsi78qqb7wdgfi"; depends=[RTCGA]; };
|
|
|
|
RTCGA_mutations = derive2 { name="RTCGA.mutations"; version="20151101.28.0"; sha256="089zy9bmwmwmihldgcw423sngjwq0vrx7bazrm3xl2psvcfday0g"; depends=[RTCGA]; };
|
|
|
|
RTCGA_rnaseq = derive2 { name="RTCGA.rnaseq"; version="20151101.28.0"; sha256="0q5k6g944xzlhivwzni7azw44rvahz7hgc9bkbbx17dpgz0nkl6y"; depends=[RTCGA]; };
|
|
|
|
RUVnormalizeData = derive2 { name="RUVnormalizeData"; version="1.18.0"; sha256="0l7cv7za7jknwa3jw3110jba31hmsf5wf0sys5kbg1jgkvv0g7ci"; depends=[Biobase]; };
|
|
|
|
RcisTarget_hg19_motifDBs_cisbpOnly_500bp = derive2 { name="RcisTarget.hg19.motifDBs.cisbpOnly.500bp"; version="1.18.0"; sha256="1qld3cm8qhfxh7p5j0g2iq6i1bxcyhs88222sqyjqjl6i0z01wdf"; depends=[data_table]; };
|
|
|
|
ReactomeGSA_data = derive2 { name="ReactomeGSA.data"; version="1.12.0"; sha256="1vm6s3n4v4ar3znlg4qlsllddp24wamz53qnmf6ay09wq0wyy9yv"; depends=[edgeR limma ReactomeGSA Seurat]; };
|
|
|
|
RegParallel = derive2 { name="RegParallel"; version="1.16.0"; sha256="04qrk7x5b3g4r2j63w0cc2qbxqcljfkjv4qrdg0qmbn3p4gi5nqv"; depends=[arm data_table doParallel foreach iterators stringr survival]; };
|
|
|
|
RforProteomics = derive2 { name="RforProteomics"; version="1.35.1"; sha256="1igdx4idgk1j0mcs8zjzd6bppj4nadryxhw2q026hazx6kj5qbxh"; depends=[BiocManager biocViews MSnbase R_utils]; };
|
|
|
|
RnBeads_hg19 = derive2 { name="RnBeads.hg19"; version="1.30.0"; sha256="00aymammhqndzwfrb1c9lkpzsia20jqx7pysl3s80nbxga7rc2nj"; depends=[GenomicRanges]; };
|
|
|
|
RnBeads_hg38 = derive2 { name="RnBeads.hg38"; version="1.30.0"; sha256="0fayz3kp02lshc42r27jwa7qd8yq6qb5g0kp1lbak062l8mzzjdp"; depends=[GenomicRanges]; };
|
|
|
|
RnBeads_mm10 = derive2 { name="RnBeads.mm10"; version="2.6.0"; sha256="0wd55fkdjl1kdchadkd6npz7fmpbacs8mz9phnw7l12nn2qd4mdn"; depends=[GenomicRanges]; };
|
|
|
|
RnBeads_mm9 = derive2 { name="RnBeads.mm9"; version="1.30.0"; sha256="17s3dpwhdv24fzk1x7ppyj63rg4rajz564dqplga9445rjb00dzd"; depends=[GenomicRanges]; };
|
|
|
|
RnBeads_rn5 = derive2 { name="RnBeads.rn5"; version="1.30.0"; sha256="149i8l5fv0c2z467bacq8lr7ff5jibd2zxxw1p7icbq4k31bcap9"; depends=[GenomicRanges]; };
|
|
|
|
RnaSeqSampleSizeData = derive2 { name="RnaSeqSampleSizeData"; version="1.30.0"; sha256="07zpwv4s8idgmjy87bpvjq0f0zvgmra7g31kghilslxiq5ywydw8"; depends=[edgeR]; };
|
|
|
|
SBGNview_data = derive2 { name="SBGNview.data"; version="1.12.0"; sha256="1a541w5xik81ln571dg3r4iiwprk4xzl95diqqxq2qyivvj6v66w"; depends=[bookdown knitr rmarkdown]; };
|
|
|
|
SCATEData = derive2 { name="SCATEData"; version="1.8.0"; sha256="05q33yxj99g0xbha3a7qibpcp33y98p6242lsl3my6p48fby7rh7"; depends=[ExperimentHub GenomicAlignments GenomicRanges]; };
|
|
|
|
SCLCBam = derive2 { name="SCLCBam"; version="1.30.0"; sha256="0969p97x5w7vwaq51bjcdclz40k9yphlr66l92rnvcl3wqbvrs0i"; depends=[]; };
|
|
|
|
SFEData = derive2 { name="SFEData"; version="1.0.2"; sha256="1kan3yii88rz9bb3rqgrcvc30pkvrjywhwfax7q51rsz71wvb52i"; depends=[AnnotationHub BiocFileCache ExperimentHub]; };
|
|
|
|
SNAData = derive2 { name="SNAData"; version="1.44.0"; sha256="133d7ky4sv7msyxxqja6rnf66c1yphx7zh0xzjf6gni4r09a7jp9"; depends=[graph]; };
|
|
|
|
SNAGEEdata = derive2 { name="SNAGEEdata"; version="1.34.0"; sha256="02an8d31yd7ryvpy2ldlf52gsyql1waz0qh8d3xsx96p9cg9il2y"; depends=[]; };
|
|
|
|
SNPhoodData = derive2 { name="SNPhoodData"; version="1.28.0"; sha256="0668whnkan61jxxi9iykaz1ny0929vnbhb27p7qngc5m92l1zja9"; depends=[]; };
|
|
|
|
STexampleData = derive2 { name="STexampleData"; version="1.6.0"; sha256="0mmc41px0yz7mij6gdnjcf8vifwk8p03jy7b5lvylfggbfng579z"; depends=[ExperimentHub SpatialExperiment]; };
|
|
|
|
SVM2CRMdata = derive2 { name="SVM2CRMdata"; version="1.30.0"; sha256="1rjkm6sdhwn4nhswqv5jhlqz4002grslz97lcp5k9i5bsl9yy5lf"; depends=[]; };
|
|
|
|
SimBenchData = derive2 { name="SimBenchData"; version="1.6.0"; sha256="0jb82fb9mqiqh9b4nn2cryylzgk5g9yibcyin8wydmv4sk8xxm5w"; depends=[ExperimentHub S4Vectors]; };
|
|
|
|
Single_mTEC_Transcriptomes = derive2 { name="Single.mTEC.Transcriptomes"; version="1.26.0"; sha256="1r4sal6cv91lp4sjxqqg291x1jv16iq0wi34wm0r0mjnfycw6x6n"; depends=[]; };
|
|
|
|
SingleCellMultiModal = derive2 { name="SingleCellMultiModal"; version="1.10.0"; sha256="0mjy130147sg1jp45niydrsinnxn6i9v4jjmlanwyf1kghl4hx7y"; depends=[AnnotationHub BiocFileCache BiocGenerics ExperimentHub HDF5Array Matrix MultiAssayExperiment S4Vectors SingleCellExperiment SpatialExperiment SummarizedExperiment]; };
|
|
|
|
SingleMoleculeFootprintingData = derive2 { name="SingleMoleculeFootprintingData"; version="1.6.0"; sha256="0mq5y03yzpxdhhlws9y3g9mz0kr3q3g38a566cvp18mmhxp3414k"; depends=[ExperimentHub]; };
|
|
|
|
SomatiCAData = derive2 { name="SomatiCAData"; version="1.36.0"; sha256="1sshapw93rbiqn9i3rg3xls7836hvg87qsl7awp17gzqlqap4331"; depends=[]; };
|
|
|
|
SomaticCancerAlterations = derive2 { name="SomaticCancerAlterations"; version="1.34.0"; sha256="1zahhn2b10187hbljp9nppvr94iz067yasfgxalkhkxl09pdpksx"; depends=[GenomicRanges IRanges S4Vectors]; };
|
|
|
|
SpikeIn = derive2 { name="SpikeIn"; version="1.40.0"; sha256="0r0lgzr0wrfvhl4fs4w5qcj0ykmngfrn341jgrxh13wn1cdk9yk9"; depends=[affy]; };
|
|
|
|
SpikeInSubset = derive2 { name="SpikeInSubset"; version="1.38.0"; sha256="0546mwyacdhcgglfgqkq2c02nzvq1a8pkybggnlvyz1bhrrg51ay"; depends=[affy Biobase]; };
|
|
|
|
TBX20BamSubset = derive2 { name="TBX20BamSubset"; version="1.34.0"; sha256="0na9f3i33h33xpbybgmxwf00mdvyvmgyfvpbj813wcrlp0m2zzhm"; depends=[Rsamtools xtable]; };
|
|
|
|
TCGAMethylation450k = derive2 { name="TCGAMethylation450k"; version="1.34.0"; sha256="19y43lxmzhly8q3xszlkz7l5v76agyflcjvz0z7bliri1hpxx6bk"; depends=[]; };
|
|
|
|
TCGAWorkflowData = derive2 { name="TCGAWorkflowData"; version="1.22.0"; sha256="02w9blh9igpflvjmfcxmnw5czjjlmh92ks1y0jhx72fz5g13mq3a"; depends=[SummarizedExperiment]; };
|
|
|
|
TCGAbiolinksGUI_data = derive2 { name="TCGAbiolinksGUI.data"; version="1.18.0"; sha256="0q1h4z1x47x5y618j4z2zp4lfhm85s0240nmzi8l8129sqfmb9m5"; depends=[]; };
|
|
|
|
TCGAcrcmRNA = derive2 { name="TCGAcrcmRNA"; version="1.18.0"; sha256="14qxsi6mn83c02mhvzs2qss59a8ld1vc94kmy03c9l3p5jcb9352"; depends=[Biobase]; };
|
|
|
|
TCGAcrcmiRNA = derive2 { name="TCGAcrcmiRNA"; version="1.18.0"; sha256="0fx3vxyc89gr2k3wnx5wlqxi6ml45hyijwbf5f7crijzh6avwhbh"; depends=[Biobase]; };
|
|
|
|
TENxBUSData = derive2 { name="TENxBUSData"; version="1.12.0"; sha256="0zqsnw0ppmh8f6x8j8ldpfza9308lspasgzbm1qw3cqa5sf2620w"; depends=[AnnotationHub BiocGenerics ExperimentHub]; };
|
|
|
|
TENxBrainData = derive2 { name="TENxBrainData"; version="1.18.0"; sha256="1mk1vjqqnpc83x5m0js3j59vxi43yp4wrzj6yrrx7rn10xz26x03"; depends=[AnnotationHub ExperimentHub HDF5Array SingleCellExperiment]; };
|
|
|
|
TENxPBMCData = derive2 { name="TENxPBMCData"; version="1.16.0"; sha256="0551izai1apxs4xz9rd0f12dpbjk2qr0sz8bb69h4rxrbp2jg7r6"; depends=[AnnotationHub ExperimentHub HDF5Array SingleCellExperiment]; };
|
|
|
|
TENxVisiumData = derive2 { name="TENxVisiumData"; version="1.6.0"; sha256="0z31bqcw2mjqx1vv34z55zcy2s2xnzj1h53j4nmxbwfncj40b9sm"; depends=[ExperimentHub SpatialExperiment]; };
|
|
|
|
TMExplorer = derive2 { name="TMExplorer"; version="1.8.0"; sha256="13prp9ksh3k5w84bbvk731fda1psb45mi56dwd9n958rj27mwkgb"; depends=[BiocFileCache Matrix SingleCellExperiment]; };
|
|
|
|
TabulaMurisData = derive2 { name="TabulaMurisData"; version="1.16.0"; sha256="0yy9bl3qqcyp8pw4afx90nn0z1zw070qhanwdlim0c4fg5p6g02l"; depends=[ExperimentHub]; };
|
|
|
|
TabulaMurisSenisData = derive2 { name="TabulaMurisSenisData"; version="1.4.0"; sha256="1xmim64br8zx57l50ip7sbyjfdwhlr8j29gzf00i610dmksb2sii"; depends=[AnnotationHub ExperimentHub gdata HDF5Array SingleCellExperiment SummarizedExperiment]; };
|
|
|
|
TargetScoreData = derive2 { name="TargetScoreData"; version="1.34.0"; sha256="0n7lr3qvppy9pbvff66mk5dc9399afac7f3kn3xkfzpcfjc27b1z"; depends=[]; };
|
|
|
|
TargetSearchData = derive2 { name="TargetSearchData"; version="1.36.0"; sha256="0dwsq9cclzxp7f6lhg22cs62gm60pgwx0w9z3h13zvign43ha8r1"; depends=[]; };
|
|
|
|
TimerQuant = derive2 { name="TimerQuant"; version="1.28.0"; sha256="0b2vh4xcns8ypmjig42zggws7pffclic57sl7w1cdmynpmn4jr33"; depends=[deSolve dplyr ggplot2 gridExtra locfit shiny]; };
|
|
|
|
VariantToolsData = derive2 { name="VariantToolsData"; version="1.22.0"; sha256="13hgmciikp246nwp0wk4528fad4ccmc587x8s45zg9ybi3ya00iw"; depends=[BiocGenerics GenomicRanges VariantAnnotation]; };
|
|
|
|
VectraPolarisData = derive2 { name="VectraPolarisData"; version="1.2.0"; sha256="0gl92bypw6axdwj83dxmvib7p72dl1n5vqfrsy398fahx24djwln"; depends=[ExperimentHub SpatialExperiment]; };
|
|
|
|
WES_1KG_WUGSC = derive2 { name="WES.1KG.WUGSC"; version="1.30.0"; sha256="0yi72kdihvrxf7w72fn24bs5r89pg10kc9myl8n4nmf2iiplcn0c"; depends=[]; };
|
|
|
|
WGSmapp = derive2 { name="WGSmapp"; version="1.10.0"; sha256="0lgfmpmnwpmrg05nz8vxlkz3jwy6gkd74fl7a2f81bh2lrs4bgh1"; depends=[GenomicRanges]; };
|
|
|
|
WeberDivechaLCdata = derive2 { name="WeberDivechaLCdata"; version="1.0.0"; sha256="1zqc26n7945b024ln82yqp5zpsmb7d5bi8zgj8hqnm09bna3qiil"; depends=[ExperimentHub SingleCellExperiment SpatialExperiment]; };
|
|
|
|
XhybCasneuf = derive2 { name="XhybCasneuf"; version="1.36.0"; sha256="1r09wr45vjcr7yxxfi5l132bqg380bicdlz699961hbinvyg7pgc"; depends=[affy ath1121501cdf RColorBrewer tinesath1cdf]; };
|
|
|
|
adductData = derive2 { name="adductData"; version="1.14.0"; sha256="0yfgjvq7qk5gvdjhrh2lyz77c6jd438ykd2mpfm6643zr2bkxp4g"; depends=[AnnotationHub ExperimentHub]; };
|
|
|
|
affycompData = derive2 { name="affycompData"; version="1.36.0"; sha256="0qcjlm2i0z8z6ab7dknwl1pdmxv69hyfpj61lhygn8ks02al12kn"; depends=[affycomp Biobase]; };
|
|
|
|
affydata = derive2 { name="affydata"; version="1.46.0"; sha256="1k2npkq41ik7c1cniz22vm9970ylrc3cjfr38iy5x5zmh8i35ypn"; depends=[affy]; };
|
|
|
|
airway = derive2 { name="airway"; version="1.18.0"; sha256="0l706h1flvv4zz82w3qyj73g28cw094vsx4iq7ahhh0vyyxg9bjx"; depends=[SummarizedExperiment]; };
|
|
|
|
alpineData = derive2 { name="alpineData"; version="1.24.0"; sha256="00r7ks6rgiwhqsayhv6l9z7i65jxgdvlj73r2mx6c04fg0nqp3y8"; depends=[AnnotationHub ExperimentHub GenomicAlignments]; };
|
|
|
|
antiProfilesData = derive2 { name="antiProfilesData"; version="1.34.0"; sha256="0kxya21ycp8fwkqbiziggf3k5y2d344qr1bk0yvncgjf7qvydfrb"; depends=[Biobase]; };
|
|
|
|
aracne_networks = derive2 { name="aracne.networks"; version="1.24.0"; sha256="1hynz34hjc49vb2di23zs921p2k0cy3b923s20g7ajfz827cpjsd"; depends=[viper]; };
|
|
|
|
bcellViper = derive2 { name="bcellViper"; version="1.34.0"; sha256="1fpgh70x2r68v0ximgcdphnyzq2hgiwbamyhbac3yka8flhrd1fm"; depends=[Biobase]; };
|
|
|
|
beadarrayExampleData = derive2 { name="beadarrayExampleData"; version="1.36.0"; sha256="15fmqxlp28j4mrbkg9fjk35ki8s15xn9kbh928cni2722b5pvxml"; depends=[beadarray Biobase]; };
|
|
|
|
benchmarkfdrData2019 = derive2 { name="benchmarkfdrData2019"; version="1.12.0"; sha256="1zhxd4y7d4j34cpvrhidz2rqd4n7ngj7wpk1klpfn3kdrsm7s4my"; depends=[ExperimentHub SummarizedExperiment]; };
|
|
|
|
beta7 = derive2 { name="beta7"; version="1.36.0"; sha256="13g2n1nywj5pd1pvhvwqqyc8q7vzxnlm9345ivfk0vnvafdvadmr"; depends=[marray]; };
|
|
|
|
biotmleData = derive2 { name="biotmleData"; version="1.22.0"; sha256="0vizblf5sv5mj9j5w3wy48pv75c97bf4lcxd0fsz73lcfz446ja4"; depends=[]; };
|
|
|
|
biscuiteerData = derive2 { name="biscuiteerData"; version="1.12.0"; sha256="0a2sk4f7lxllja3pbawd5apkcvlh2flw6xa69vn71860fi9k831v"; depends=[AnnotationHub curl ExperimentHub]; };
|
|
|
|
bladderbatch = derive2 { name="bladderbatch"; version="1.36.0"; sha256="13zgwh3g6iy4pdq8w5wx5nmzh4ypc17d6apm9c1mv3y4xaya7i1h"; depends=[Biobase]; };
|
|
|
|
blimaTestingData = derive2 { name="blimaTestingData"; version="1.18.0"; sha256="0wyvskjn3kfqlnfll36c86cb9gxj4vj194mvpy2p8mbmarhpb2qr"; depends=[]; };
|
|
|
|
bodymapRat = derive2 { name="bodymapRat"; version="1.14.0"; sha256="1jfa3i1d1llhqqa5pxbj7raj09sw4j7ayclnr5325n49cblvrgln"; depends=[ExperimentHub SummarizedExperiment]; };
|
|
|
|
breakpointRdata = derive2 { name="breakpointRdata"; version="1.16.0"; sha256="0f23i4ynb4vgn22c3d2l64z92rzv3qnwd4j8qyvalklrxkwilhfn"; depends=[]; };
|
|
|
|
breastCancerMAINZ = derive2 { name="breastCancerMAINZ"; version="1.36.0"; sha256="0rfcycjl3jz3fgx7h46hi40gppq640c0mdyf6nh42zc34ml49cml"; depends=[]; };
|
|
|
|
breastCancerNKI = derive2 { name="breastCancerNKI"; version="1.36.0"; sha256="11kv9bnbi1p8qlnyayqb7380mwx95a7cd5vljq3zmw74v6723h6k"; depends=[]; };
|
|
|
|
breastCancerTRANSBIG = derive2 { name="breastCancerTRANSBIG"; version="1.36.0"; sha256="1z7p2fgbd80hqqrphw6kr3hasx4ybigd4ilw22i040b8c5zkilfw"; depends=[]; };
|
|
|
|
breastCancerUNT = derive2 { name="breastCancerUNT"; version="1.36.0"; sha256="0rdjk0cl0shhfx3jr0cpnh9whhdcnbj6akhipc2c5sk2l7kagiz8"; depends=[]; };
|
|
|
|
breastCancerUPP = derive2 { name="breastCancerUPP"; version="1.36.0"; sha256="19bzlxj106ww4ffkgd15fhq4idqvnwa5slbb4f65xf0nnpf11s19"; depends=[]; };
|
|
|
|
breastCancerVDX = derive2 { name="breastCancerVDX"; version="1.36.0"; sha256="0kk048gs3ksg163hcscnb1ng3zswqg5mzzyy1jlb6q0rswh4f6zx"; depends=[]; };
|
|
|
|
brgedata = derive2 { name="brgedata"; version="1.20.0"; sha256="0brjmgjcpx8ka1idxd4fm6aa1mgw1nbsa99di3j5n65k34dapzmi"; depends=[Biobase SummarizedExperiment]; };
|
|
|
|
bronchialIL13 = derive2 { name="bronchialIL13"; version="1.36.0"; sha256="0vj61n1h52y1yhlf32pqvfz7zk77r02j7pxpd6aih8p7yhpna4f0"; depends=[affy]; };
|
|
|
|
bsseqData = derive2 { name="bsseqData"; version="0.36.0"; sha256="15qii9mqm05p84m8m2w65rk2hayq354127j33f6dv8zfnyijr1sk"; depends=[bsseq]; };
|
|
|
|
cMap2data = derive2 { name="cMap2data"; version="1.34.0"; sha256="10r4dbw76bzhqc2aclksib0nnyzsn59xwazaghq8cm0nbaidddf4"; depends=[]; };
|
|
|
|
cancerdata = derive2 { name="cancerdata"; version="1.36.0"; sha256="01cmwqz3h8rbymgws6fsd5rdjiq0k8p9jyl31l5lqck53z1ngxfl"; depends=[Biobase]; };
|
|
|
|
ccTutorial = derive2 { name="ccTutorial"; version="1.36.0"; sha256="0c76b68hasc8g452mc3q5w2d2xar8qp8hkpg0n98pyzlm5yddqzd"; depends=[affy Biobase Ringo topGO]; };
|
|
|
|
ccdata = derive2 { name="ccdata"; version="1.24.0"; sha256="1gag2w14qb2jialkgwapdkh8l0impa6ni621za9gz08yvgw0m8c3"; depends=[]; };
|
|
|
|
celarefData = derive2 { name="celarefData"; version="1.16.0"; sha256="1kblk1dl6ysxlfqb0z5jqcffniafsl786mpvgqw6hjxnjya5vz28"; depends=[]; };
|
|
|
|
celldex = derive2 { name="celldex"; version="1.8.0"; sha256="1nn87ig61cy87n7fjz45x13xl7ap1frd2i6pgp2y2wx0lj83hamb"; depends=[AnnotationDbi AnnotationHub DelayedArray DelayedMatrixStats ExperimentHub S4Vectors SummarizedExperiment]; };
|
|
|
|
chipenrich_data = derive2 { name="chipenrich.data"; version="2.22.0"; sha256="1rh329i39zc5ip6h7v5pdy8383ak0jdq27zvi2szci450sqrrmp1"; depends=[AnnotationDbi BiocGenerics GenomeInfoDb GenomicRanges IRanges readr rtracklayer S4Vectors]; };
|
|
|
|
chipseqDBData = derive2 { name="chipseqDBData"; version="1.14.0"; sha256="06r2l4z26barr7fa0p7brpm5ds3c234vpbcd54g5chah57n2v420"; depends=[AnnotationHub ExperimentHub Rsamtools S4Vectors]; };
|
|
|
|
chromstaRData = derive2 { name="chromstaRData"; version="1.24.0"; sha256="0hip3b4dkkcqvy8n5ac8m1r7qa0hr3apb5a7wm9zi11dyzyin0g0"; depends=[]; };
|
|
|
|
clustifyrdatahub = derive2 { name="clustifyrdatahub"; version="1.8.0"; sha256="01p7qy2svm382v4ykfzndy562dlgrbzzzrf6rfnk6w1j5lhads1r"; depends=[ExperimentHub]; };
|
|
|
|
cnvGSAdata = derive2 { name="cnvGSAdata"; version="1.34.0"; sha256="0b08mq034w6xs64f9280ckvdz0g2r7glclpkpwmcw6rw73qi35w3"; depends=[cnvGSA]; };
|
|
|
|
colonCA = derive2 { name="colonCA"; version="1.40.0"; sha256="0an3vhj7mbyyzpnpi078wcky8p83lr46dlj6079g13j0azpmf7cr"; depends=[Biobase]; };
|
|
|
|
crisprScoreData = derive2 { name="crisprScoreData"; version="1.2.0"; sha256="0b0vkcd30m56cnk1rsincigs66yh5pvlmpzl61hz1iyhc7367bqn"; depends=[AnnotationHub ExperimentHub]; };
|
|
|
|
curatedAdipoArray = derive2 { name="curatedAdipoArray"; version="1.10.0"; sha256="07xaaqrxnyvq0binjyxdn1wy523frynkbql2wzhbhafwq9x02xnj"; depends=[]; };
|
|
|
|
curatedAdipoChIP = derive2 { name="curatedAdipoChIP"; version="1.14.0"; sha256="0rhcw4wy023g55586hz6zyvzlcb3cfmm0jp3rsa0iq8pbm2r9n6m"; depends=[ExperimentHub SummarizedExperiment]; };
|
|
|
|
curatedAdipoRNA = derive2 { name="curatedAdipoRNA"; version="1.14.0"; sha256="0mq25yi91hm60ak3mws7wi49hvllirxfzz4kqjxxr493bkdllxkl"; depends=[SummarizedExperiment]; };
|
|
|
|
curatedBladderData = derive2 { name="curatedBladderData"; version="1.34.0"; sha256="1vp9w40v37xgjdsg8m0w7580h2i0xi823f34qik87mj1hr5xawsf"; depends=[affy]; };
|
|
|
|
curatedBreastData = derive2 { name="curatedBreastData"; version="2.26.0"; sha256="02iflnwfpcmglj060w5zygqccii91n2s0vp9bkl1ppj6g409pxm3"; depends=[Biobase BiocStyle ggplot2 impute XML]; };
|
|
|
|
curatedCRCData = derive2 { name="curatedCRCData"; version="2.30.0"; sha256="0hbc3d1sj1mfqszmfgkmhpnkbw4mdapp85s7bj2spmcwf0pcsr0n"; depends=[BiocGenerics nlme]; };
|
|
|
|
curatedMetagenomicData = derive2 { name="curatedMetagenomicData"; version="3.6.0"; sha256="0ry9063nmcc5n289a2h7rpv7dgf25i3yk44nfsslfy73bvrdnz75"; depends=[AnnotationHub dplyr ExperimentHub magrittr mia purrr rlang S4Vectors stringr SummarizedExperiment tibble tidyr tidyselect TreeSummarizedExperiment]; };
|
|
|
|
curatedOvarianData = derive2 { name="curatedOvarianData"; version="1.36.0"; sha256="09zb3m32a2rqwgs2x6g1ixvwnbx0100mb2m8rkbkdlfczlnq9riq"; depends=[affy BiocGenerics]; };
|
|
|
|
curatedTBData = derive2 { name="curatedTBData"; version="1.4.0"; sha256="0ksb30h6hlksxzgp0dl1f09jr4a59zdll9jnla8xcsbqqvbkm4g7"; depends=[AnnotationHub ExperimentHub MultiAssayExperiment rlang]; };
|
|
|
|
curatedTCGAData = derive2 { name="curatedTCGAData"; version="1.20.0"; sha256="01q3bcspvff2syg5d933iqfxwl62axfy4xbzkwlg15as7bl7a54r"; depends=[AnnotationHub ExperimentHub HDF5Array MultiAssayExperiment S4Vectors SummarizedExperiment]; };
|
|
|
|
davidTiling = derive2 { name="davidTiling"; version="1.38.0"; sha256="1g8q0m03ss7nf2v3rk6db93mmbzy1kc960scs37pc3s9xdm7k9ak"; depends=[Biobase GO_db tilingArray]; };
|
|
|
|
depmap = derive2 { name="depmap"; version="1.12.0"; sha256="10y1s5v6c74ynq8m0rck41w16hglnr700c322k5p9yzndf86f3hv"; depends=[AnnotationHub dplyr ExperimentHub]; };
|
|
|
|
derfinderData = derive2 { name="derfinderData"; version="2.16.0"; sha256="147bf7x90prw1x58gy6w13l02sf6zbn4888ikw817k9n5ja3f3x1"; depends=[]; };
|
|
|
|
diffloopdata = derive2 { name="diffloopdata"; version="1.26.0"; sha256="0kdh2kd0wv324nzi1zwx765hj2fblp02lnyabmyc0xdvinv64vmy"; depends=[]; };
|
|
|
|
diggitdata = derive2 { name="diggitdata"; version="1.30.0"; sha256="020v1l8h8xmxk0v5fnbvp769mks71wzdmkqjawjngd7v0jj9zclp"; depends=[Biobase viper]; };
|
|
|
|
dorothea = derive2 { name="dorothea"; version="1.10.0"; sha256="05vkb5mash2m8p6njk842sy5pz7vblrm8n9bphqbslm86kld5n92"; depends=[bcellViper dplyr magrittr viper]; };
|
|
|
|
dressCheck = derive2 { name="dressCheck"; version="0.36.0"; sha256="0yrnm6i36zrcjri8fispnlk29wbrj5p2ld716qbd3v7i7kh65v2f"; depends=[Biobase]; };
|
|
|
|
dyebiasexamples = derive2 { name="dyebiasexamples"; version="1.38.0"; sha256="0f940198kz8i81s3j3sk5kiaradvk6f9g1w7y40kr92y67p0l438"; depends=[GEOquery marray]; };
|
|
|
|
easierData = derive2 { name="easierData"; version="1.4.0"; sha256="0w8g2b6d0c97m796nl09s7ls8wzs6ir7947maygi0a9qv20b2n0x"; depends=[AnnotationHub ExperimentHub SummarizedExperiment]; };
|
|
|
|
ecoliLeucine = derive2 { name="ecoliLeucine"; version="1.38.0"; sha256="1303yzp75n9ipvvp5avajcs45p0nz6hqisgl2h58baq9qqxgda6z"; depends=[affy ecolicdf]; };
|
|
|
|
emtdata = derive2 { name="emtdata"; version="1.6.0"; sha256="182v17zcsfi1k6vmyjg6m9pdmfzg9ljvhdvydgr63zmjhdh3l4p2"; depends=[edgeR ExperimentHub SummarizedExperiment]; };
|
|
|
|
epimutacionsData = derive2 { name="epimutacionsData"; version="1.2.0"; sha256="10ihas90rqkfagi95hhvpz6clpwlsclv2vx2sgy4v51mwk71hhps"; depends=[]; };
|
|
|
|
estrogen = derive2 { name="estrogen"; version="1.44.0"; sha256="00mw9cvvh28yp3brdm3jyaal3vkkwis8gla4v30glpivb3nd13yq"; depends=[]; };
|
|
|
|
etec16s = derive2 { name="etec16s"; version="1.26.0"; sha256="1cbyzvymznf9rsi22psd61vsnf1m64zsq9fwz6yani7h4lr2i1sp"; depends=[Biobase metagenomeSeq]; };
|
|
|
|
ewceData = derive2 { name="ewceData"; version="1.6.0"; sha256="15lrlg8yl570cxyqlh2cp7cy6l7n9bcbrz2dn9713q3649r9gh9z"; depends=[ExperimentHub]; };
|
|
|
|
faahKO = derive2 { name="faahKO"; version="1.38.0"; sha256="04jc58rzd1ykchhvcg5zvi22gkj26g4a2qm9ciyky9my3mihjz1l"; depends=[xcms]; };
|
|
|
|
fabiaData = derive2 { name="fabiaData"; version="1.36.0"; sha256="072hip7xgd55bbjbnnw645hm89cv7821j6m02d360hyi4l17kmbf"; depends=[Biobase]; };
|
|
|
|
ffpeExampleData = derive2 { name="ffpeExampleData"; version="1.36.0"; sha256="19fsyxdfaq75r7a7z0p4479afgk8bjbmnw8yh731s826hd5xbcjr"; depends=[lumi]; };
|
|
|
|
fibroEset = derive2 { name="fibroEset"; version="1.40.0"; sha256="1bna044rbxmqck6rkq3dyrc3cgvvscpldzv4j7skw55d9vxy495a"; depends=[Biobase]; };
|
|
|
|
fission = derive2 { name="fission"; version="1.18.0"; sha256="0lrwkwf56nqzwrn0vs5g8xr5vbb32qrlaif3c86z04jnzkdx3xnj"; depends=[SummarizedExperiment]; };
|
|
|
|
flowPloidyData = derive2 { name="flowPloidyData"; version="1.24.0"; sha256="1fqv9hw18aa9rb7mq09d1njl0y8ix2m1njini99w7ivs1c19lcpa"; depends=[]; };
|
|
|
|
flowWorkspaceData = derive2 { name="flowWorkspaceData"; version="3.10.0"; sha256="100r6sjwkbwhw93prqszgnqsgs2i6m10kivzrqwrmk9kbr9ib58z"; depends=[]; };
|
|
|
|
frmaExampleData = derive2 { name="frmaExampleData"; version="1.34.0"; sha256="0yxpsgqigv75dwy8hn9yrbxskqalh2wdhvp0iv84fr1m7md5k9pb"; depends=[]; };
|
|
|
|
furrowSeg = derive2 { name="furrowSeg"; version="1.26.0"; sha256="1ig42k7xwxpmcn1iairmg3lqvii5jidrm6v62whjpmvafh7sqjvc"; depends=[abind dplyr EBImage locfit tiff]; };
|
|
|
|
gageData = derive2 { name="gageData"; version="2.36.0"; sha256="1ikmf894d8bqk3n5yvsm4chvs65hi8drvdwdagkrfqvdrf0pb96s"; depends=[]; };
|
|
|
|
gaschYHS = derive2 { name="gaschYHS"; version="1.36.0"; sha256="17mxnym5wqzjgli5rlkwrck5jp9qdhnvmqaqmsz4w1hjdx9raxb7"; depends=[Biobase]; };
|
|
|
|
gatingMLData = derive2 { name="gatingMLData"; version="2.38.0"; sha256="1dhm48nrh1y0x6p50045cn6f21bg35i0b4z7bjymn9aw0n9r5fyk"; depends=[]; };
|
|
|
|
gcspikelite = derive2 { name="gcspikelite"; version="1.36.0"; sha256="0kyy1pm7582am6rgfr8kbfw1diwb9zpsblgnbjq0c18zb3kg21sn"; depends=[]; };
|
|
|
|
geneLenDataBase = derive2 { name="geneLenDataBase"; version="1.34.0"; sha256="1xcnsg1cv1q13bwaqf4dyv05fbxpjg58c338v0nh9sg13nrg174g"; depends=[GenomicFeatures rtracklayer]; };
|
|
|
|
genomationData = derive2 { name="genomationData"; version="1.30.0"; sha256="0k3zdpxjzv2nc2v11n0hk7gi8s7v1gjmmqslidqi2y77y1z64rpr"; depends=[]; };
|
|
|
|
golubEsets = derive2 { name="golubEsets"; version="1.40.0"; sha256="1n92qi82if1myq6qn7143dn3bz021qf9x9pfq93sjp78gizd8n41"; depends=[Biobase]; };
|
|
|
|
gpaExample = derive2 { name="gpaExample"; version="1.10.0"; sha256="0wprivx26a0c0j2yjp74af97019lafg3584i2ik3pbq9kn9qsnk6"; depends=[]; };
|
|
|
|
grndata = derive2 { name="grndata"; version="1.30.0"; sha256="1wwhkjhnpn5qyvnk2a2x347gry834bk98ri62qgkn48i7bxdl4nn"; depends=[]; };
|
|
|
|
h5vcData = derive2 { name="h5vcData"; version="2.18.0"; sha256="0im0wp751zqf46hvv99pmy7qz0j2hlr8mqyxljf8m0aydrhdd1c0"; depends=[]; };
|
|
|
|
hapmap100khind = derive2 { name="hapmap100khind"; version="1.40.0"; sha256="1d0q84lz3a47znd7w3hjcml9awvkn4qaqk0zlxibifzzbqyh17ci"; depends=[]; };
|
|
|
|
hapmap100kxba = derive2 { name="hapmap100kxba"; version="1.40.0"; sha256="0lb36nhdj4vq7d87niwxllmyql0k283mxj41amcf7wr5i1lkx8bq"; depends=[]; };
|
|
|
|
hapmap500knsp = derive2 { name="hapmap500knsp"; version="1.40.0"; sha256="0bfsa6niqrvz4krwc8lgidx57n311lvnxdfajzxg0icinlji4nkc"; depends=[]; };
|
|
|
|
hapmap500ksty = derive2 { name="hapmap500ksty"; version="1.40.0"; sha256="0b3jmbf3brqd8w4f7ryzxkgis0g36ckr390gl2hw5llvsz01kr4v"; depends=[]; };
|
|
|
|
hapmapsnp5 = derive2 { name="hapmapsnp5"; version="1.40.0"; sha256="1w0j2zgw5xd6ni13vgi61i4zikpf62h6miq8cfhqc6i9frb5h3an"; depends=[]; };
|
|
|
|
hapmapsnp6 = derive2 { name="hapmapsnp6"; version="1.40.0"; sha256="1ngb3rwdz6891hlvy4qblj0p04l5hgcvj60yb1nfccbmg9389phc"; depends=[]; };
|
|
|
|
harbChIP = derive2 { name="harbChIP"; version="1.36.0"; sha256="0dj0nmsqmp8wlhjisjj1dwiyspjkkk2jlb9qkp6p9c2brbbpzyc0"; depends=[Biobase Biostrings IRanges]; };
|
|
|
|
healthyControlsPresenceChecker = derive2 { name="healthyControlsPresenceChecker"; version="1.2.0"; sha256="1a9i2qyhz5gf98096hll7q8mwzidff8jrnclw2z1s4w3wjmv1f8q"; depends=[geneExpressionFromGEO GEOquery magrittr xml2]; };
|
|
|
|
healthyFlowData = derive2 { name="healthyFlowData"; version="1.36.0"; sha256="1s581y2z33420cjjmr05l0hsnrgiy3ifn7mhhndplsmfy9q36kji"; depends=[flowCore]; };
|
|
|
|
hgu133abarcodevecs = derive2 { name="hgu133abarcodevecs"; version="1.36.0"; sha256="0q5dlsndx9b77wndai51dk2mv6fw7qkixhq9vxrsvy7yapflc68b"; depends=[]; };
|
|
|
|
hgu133plus2CellScore = derive2 { name="hgu133plus2CellScore"; version="1.18.0"; sha256="0vx2gfxbk3fr4xcicwblrm1lcnmmnljpv97zrzlgyqmx5clj13jm"; depends=[Biobase]; };
|
|
|
|
hgu133plus2barcodevecs = derive2 { name="hgu133plus2barcodevecs"; version="1.36.0"; sha256="167wfkp7w6ly6mzmdjg7lq2r2dyp8f6fpy3nfg2r9yli76gmx59v"; depends=[]; };
|
|
|
|
hgu2beta7 = derive2 { name="hgu2beta7"; version="1.38.0"; sha256="0n2g88j7rpqabb6gkq8gy0iml1dikkdknkkhzqaz79cmvj28iiy2"; depends=[]; };
|
|
|
|
humanStemCell = derive2 { name="humanStemCell"; version="0.38.0"; sha256="1s5jlh5xiw5hgnk3x2c6y6rb5gjmbnc8mglih8kc10y9agghj2rv"; depends=[Biobase hgu133plus2_db]; };
|
|
|
|
imcdatasets = derive2 { name="imcdatasets"; version="1.6.0"; sha256="0n0bk4kh8d7sr5c8w953d6ns17ylzjq5dic4rh953l197pdsihfc"; depends=[cytomapper DelayedArray ExperimentHub HDF5Array S4Vectors SingleCellExperiment SpatialExperiment]; };
|
|
|
|
kidpack = derive2 { name="kidpack"; version="1.40.0"; sha256="10padi12jp5all6bpi2wp5wsx5cn7nxp100kcf9bm3rxkaqccfiq"; depends=[Biobase]; };
|
|
|
|
leeBamViews = derive2 { name="leeBamViews"; version="1.34.0"; sha256="0p0mcwyhf052fviggi5vmg1xb8h1inp0vg4i0dqvqbh2w85fg3wp"; depends=[Biobase BSgenome GenomicAlignments GenomicRanges IRanges Rsamtools S4Vectors]; };
|
|
|
|
leukemiasEset = derive2 { name="leukemiasEset"; version="1.34.0"; sha256="0l23s68hdjj2pj3wfv8vzag6lbsd3py2463b2rgb084b4cnsc07b"; depends=[Biobase]; };
|
|
|
|
lumiBarnes = derive2 { name="lumiBarnes"; version="1.38.0"; sha256="00bc1s583mkj9iqn64mgz3h64kj5dnq1b9lwgz73cn9zhgzll9lx"; depends=[Biobase lumi]; };
|
|
|
|
lungExpression = derive2 { name="lungExpression"; version="0.36.0"; sha256="0pksq9gi0vahg10lnr81nacn5rlb6i3z495ymm7vqiiygc4mx81m"; depends=[Biobase]; };
|
|
|
|
lydata = derive2 { name="lydata"; version="1.24.0"; sha256="031g2hzmrbf83ac4inn9670nn055axr60hiv9cj8jkjnwpi938sj"; depends=[]; };
|
|
|
|
mAPKLData = derive2 { name="mAPKLData"; version="1.30.0"; sha256="01bd8zcxnncfkfdlli7ay4v8rh2wkhh6gidk7442qw86x7d1dxbx"; depends=[]; };
|
|
|
|
mCSEAdata = derive2 { name="mCSEAdata"; version="1.18.0"; sha256="1bxnczhvmgf1ilff91h9g2kzk6i76l42gh2gfapjlkhd3g2wl31z"; depends=[]; };
|
|
|
|
macrophage = derive2 { name="macrophage"; version="1.14.0"; sha256="1dwq7agr98pqv5f910kz8z4szscsrl15j4f4zakv8m1ajkyz53h2"; depends=[]; };
|
|
|
|
mammaPrintData = derive2 { name="mammaPrintData"; version="1.34.0"; sha256="0bpm2w3p97sp0jwmqmzs2h4pizfj7x742pnnib5rbvlmc59ypwc0"; depends=[]; };
|
|
|
|
maqcExpression4plex = derive2 { name="maqcExpression4plex"; version="1.42.0"; sha256="0j8ikjbcpd703gpzxi7lx4hmsrh0p1vxz222vnw352imd2bxi58v"; depends=[]; };
|
|
|
|
mcsurvdata = derive2 { name="mcsurvdata"; version="1.16.0"; sha256="1wbwf365wsd931y4a0vyif02svl16rx2rglxkw93i7cdkblpjr28"; depends=[AnnotationHub Biobase ExperimentHub]; };
|
|
|
|
metaMSdata = derive2 { name="metaMSdata"; version="1.34.0"; sha256="0hw8kaysnw6kf524vmrkkzkins1r8a9w6a1x4k7zq1hklfvwb72x"; depends=[]; };
|
|
|
|
methylclockData = derive2 { name="methylclockData"; version="1.6.0"; sha256="1ip9n0329d3wx4q9a4xpng6lzrls3yx93c0z9m0j2q1jsb8bwaxa"; depends=[ExperimentHub ExperimentHubData]; };
|
|
|
|
miRNATarget = derive2 { name="miRNATarget"; version="1.36.0"; sha256="1ln3vz92ci3m8p165c33j2p6zxzgibmca9mdph1k1cc1mnp64jh2"; depends=[Biobase]; };
|
|
|
|
miRcompData = derive2 { name="miRcompData"; version="1.28.0"; sha256="1gz7bnis42vmkx5h31nvrfy7gnvypb08sh5ayblfzfcva1mx14dp"; depends=[]; };
|
|
|
|
microRNAome = derive2 { name="microRNAome"; version="1.20.0"; sha256="0hxwnhlvkhgjxljzmkjs94r3d1w4da8g2chryqyllsklhzs0g0ki"; depends=[SummarizedExperiment]; };
|
|
|
|
microbiomeDataSets = derive2 { name="microbiomeDataSets"; version="1.6.0"; sha256="15y39w53yn9jzm682fhq7cf971pcg78hn1xbdha7aavdnd4032vj"; depends=[ape BiocGenerics Biostrings ExperimentHub MultiAssayExperiment SummarizedExperiment TreeSummarizedExperiment]; };
|
|
|
|
minfiData = derive2 { name="minfiData"; version="0.44.0"; sha256="15s3kc629m2c78vkidmp6kcc28sn1wzjzrxazmd8z7x8cdad3q4g"; depends=[IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest minfi]; };
|
|
|
|
minfiDataEPIC = derive2 { name="minfiDataEPIC"; version="1.24.0"; sha256="03kfxq5fq66y6z1aliyxam6dgxmr4asmxvqfzla8br5rpd1sa8qc"; depends=[IlluminaHumanMethylationEPICanno_ilm10b2_hg19 IlluminaHumanMethylationEPICmanifest minfi]; };
|
|
|
|
minionSummaryData = derive2 { name="minionSummaryData"; version="1.28.0"; sha256="0cqchzvdk13y80xsxnkaxd4x6c14d6wmc0vml3i8mzdqfh2d5bz1"; depends=[]; };
|
|
|
|
mosaicsExample = derive2 { name="mosaicsExample"; version="1.36.0"; sha256="1p1acg1gwc1xb7g66bikvcdjix007i5l9vi8r4qjm28h78iij1rj"; depends=[]; };
|
|
|
|
mouse4302barcodevecs = derive2 { name="mouse4302barcodevecs"; version="1.36.0"; sha256="0bdsfnb7qmazshzy2ww8vp2n3m0x27v65z94gw5bi6bnrmakl040"; depends=[]; };
|
|
|
|
msPurityData = derive2 { name="msPurityData"; version="1.26.0"; sha256="07zjdbi5nyp2yq9x37wk4yg24s3c5l8gw1r91x0pb93kb52i5p1v"; depends=[]; };
|
|
|
|
msd16s = derive2 { name="msd16s"; version="1.18.0"; sha256="0glsh139jn0by93f52850y5nbh14wbapc0qmr8ib7ql7y25q0l16"; depends=[Biobase metagenomeSeq]; };
|
|
|
|
msdata = derive2 { name="msdata"; version="0.38.0"; sha256="0rrmf8dygql6pisac18khjk4fn2zk2wn6f9j2x3y4z5345s0a0hn"; depends=[]; };
|
|
|
|
msigdb = derive2 { name="msigdb"; version="1.6.0"; sha256="01pxk4hs8zd89ck1q7h0apd4ypy7v7y9k4xx6rqd80wzn5bkc8rc"; depends=[AnnotationDbi AnnotationHub ExperimentHub GSEABase org_Hs_eg_db org_Mm_eg_db]; };
|
|
|
|
msqc1 = derive2 { name="msqc1"; version="1.26.0"; sha256="15idd0dl3q3707ircfvylh5q12ndpa38fk5cwba59732092pc866"; depends=[lattice]; };
|
|
|
|
mtbls2 = derive2 { name="mtbls2"; version="1.28.0"; sha256="0nd4zb7lr4v5fcms3qx8zhy72gwg41kk6x2b1q68hajf8dww6r9x"; depends=[]; };
|
|
|
|
muscData = derive2 { name="muscData"; version="1.12.0"; sha256="062xiaaka1k1raq5mhmr1wxwb755ws0n00dki1zsj2kl4l4lca2f"; depends=[ExperimentHub SingleCellExperiment]; };
|
|
|
|
mvoutData = derive2 { name="mvoutData"; version="1.34.0"; sha256="0lybg4whmlr8d7glmlnz981n3cg5ypmj2w7pdkxwphmm0l0bchq5"; depends=[affy Biobase lumi]; };
|
|
|
|
nanotubes = derive2 { name="nanotubes"; version="1.14.0"; sha256="05i7yrmibbv4wgdnmlagmpnxzsv8hiqnf5w3cbpm3xvchmi3zzvx"; depends=[]; };
|
|
|
|
nullrangesData = derive2 { name="nullrangesData"; version="1.4.0"; sha256="1991pdj4mwaryli85kn3v8lj367l9yqym6j5swmjmpgvszrk6b1h"; depends=[ExperimentHub GenomicRanges InteractionSet]; };
|
|
|
|
oct4 = derive2 { name="oct4"; version="1.14.0"; sha256="1dzwbqwm10zhn1qr1r7d704jhm2knhccmy1zywgsr1y6fizwl6rv"; depends=[]; };
|
|
|
|
octad_db = derive2 { name="octad.db"; version="1.0.0"; sha256="09wzmy23x1b1dc40a522kxw8ry2migs22h15bfzl10l8mxryibhf"; depends=[ExperimentHub]; };
|
|
|
|
optimalFlowData = derive2 { name="optimalFlowData"; version="1.10.0"; sha256="123wfjjv8pcx4xjaggmcndmsdcsdx4jr9rj97wlzwf6f7inxq282"; depends=[]; };
|
|
|
|
pRolocdata = derive2 { name="pRolocdata"; version="1.36.0"; sha256="0q1fi4msl2xyx3cgknwmfp9hlgqk46y68znrq0knnsz6fkl4n9qa"; depends=[Biobase MSnbase]; };
|
|
|
|
parathyroidSE = derive2 { name="parathyroidSE"; version="1.36.0"; sha256="1yk7cyhsdj1zp87ggng8mciagp8kpkrnrv5qa9w1i8ap3dwvxrs8"; depends=[SummarizedExperiment]; };
|
|
|
|
pasilla = derive2 { name="pasilla"; version="1.26.0"; sha256="0xi2f37v0ds6ivzgx53mfb2isvz8npn8wmdczg88ym6b77g6a3ki"; depends=[DEXSeq]; };
|
|
|
|
pasillaBamSubset = derive2 { name="pasillaBamSubset"; version="0.36.0"; sha256="072gqidg42235zfx8qqd8sv7kigrkagkkw4i3nj5sbxzqb1f8vvs"; depends=[]; };
|
|
|
|
pcxnData = derive2 { name="pcxnData"; version="2.20.0"; sha256="1ga9azlwx6qfr1f452k80bg2kfkwf18mjk39plq0yjzisrj1jy5m"; depends=[]; };
|
|
|
|
pd_atdschip_tiling = derive2 { name="pd.atdschip.tiling"; version="0.36.0"; sha256="13c9f1hwfngkp3d4ljcm5xjlr6r6fsiyb06b18q3b8kp5wya9lp2"; depends=[Biostrings DBI IRanges oligo oligoClasses RSQLite S4Vectors]; };
|
|
|
|
pepDat = derive2 { name="pepDat"; version="1.18.0"; sha256="1cirzkhi76jjqf0cgbb3hq69ykkivpxl0nf52x3vi3wp67ai3x0p"; depends=[GenomicRanges]; };
|
|
|
|
plasFIA = derive2 { name="plasFIA"; version="1.26.0"; sha256="0vbqjbfc75pb2gk49sl6aihmvcc38ylngyr1bgdvdxr0xh11imv0"; depends=[proFIA]; };
|
|
|
|
plotgardenerData = derive2 { name="plotgardenerData"; version="1.4.0"; sha256="0zpsjr3q3jgd07091i78x4izcqaxk1dqyfanmy2z08xd313mqniq"; depends=[]; };
|
|
|
|
prebsdata = derive2 { name="prebsdata"; version="1.34.0"; sha256="1qgd3bmlm2bcqyfsdhfnms6q1bsdi7k0pn9yd9lfwzd3yj9lns1m"; depends=[]; };
|
|
|
|
preciseTADhub = derive2 { name="preciseTADhub"; version="1.6.0"; sha256="0hs04i0l0wsdcg9k2j2gbdfmi2cd05gmncjw8vbpiqc5170lcxnp"; depends=[ExperimentHub]; };
|
|
|
|
prostateCancerCamcap = derive2 { name="prostateCancerCamcap"; version="1.26.0"; sha256="1z2s8z98a3zbj9wjzwgma3pbl0z2bjkqv3lgslay3l8b7xb1pw2r"; depends=[Biobase]; };
|
|
|
|
prostateCancerGrasso = derive2 { name="prostateCancerGrasso"; version="1.26.0"; sha256="008d32f1wva5n75cdz4lf0pcm0bszjc0qklc69mxq64riq1z410h"; depends=[Biobase]; };
|
|
|
|
prostateCancerStockholm = derive2 { name="prostateCancerStockholm"; version="1.26.0"; sha256="12hndm71gqicmkll47dc9blxq650k20bny7dgckg4jx1ck5j8dmr"; depends=[Biobase]; };
|
|
|
|
prostateCancerTaylor = derive2 { name="prostateCancerTaylor"; version="1.26.0"; sha256="07k18cx9i0ca29hf00dfmqp3qbqdlh10hfx4kwn4q42ixj57hkf4"; depends=[Biobase]; };
|
|
|
|
prostateCancerVarambally = derive2 { name="prostateCancerVarambally"; version="1.26.0"; sha256="0bg8jdvqhrh6qyyp5jsrsv09wzixsxkwfx7j1g7jz5w4zh3z35rx"; depends=[Biobase]; };
|
|
|
|
ptairData = derive2 { name="ptairData"; version="1.6.0"; sha256="16x9c6gp7mg8hiw9hv49nmx41hd5sxxhyblf2jq8gf1aydvmfpij"; depends=[rhdf5 signal]; };
|
|
|
|
pumadata = derive2 { name="pumadata"; version="2.34.0"; sha256="1pc7jmx5qh3zj5wk7kjfzlbq2cipw0943fw5ykqivvlinlg7f57y"; depends=[Biobase oligo puma]; };
|
|
|
|
pwrEWAS_data = derive2 { name="pwrEWAS.data"; version="1.12.0"; sha256="1icq59yifsaxifxl29pxx97vrl27cfkwqziz9cpcbc3lqfp8iqmj"; depends=[ExperimentHub]; };
|
|
|
|
qPLEXdata = derive2 { name="qPLEXdata"; version="1.16.0"; sha256="177gin4y9jb7188myan5h847yzanwgfwjiwrdz2bd2iskbygbsq3"; depends=[dplyr knitr MSnbase qPLEXanalyzer]; };
|
|
|
|
rRDPData = derive2 { name="rRDPData"; version="1.18.0"; sha256="16p33xyp8pw2sx2bq4fhlxlmrlfy0b6zqpnf1f0dy1857nll6kp4"; depends=[rRDP]; };
|
|
|
|
rcellminerData = derive2 { name="rcellminerData"; version="2.20.0"; sha256="1imqc82pfmxpiscajslzw6fyy8qplabmyq6745p963pjh7kqk7qb"; depends=[Biobase]; };
|
|
|
|
restfulSEData = derive2 { name="restfulSEData"; version="1.20.0"; sha256="1j3ix1900mckca70n4qjzaw44mwzqfbvc5nb0ww23b5ihbly0gls"; depends=[DelayedArray ExperimentHub HDF5Array SummarizedExperiment]; };
|
|
|
|
rheumaticConditionWOLLBOLD = derive2 { name="rheumaticConditionWOLLBOLD"; version="1.36.0"; sha256="1ks94mcjvr6fm9ww2h2ll9kcnmm0skycj58z6g5g98182nximy65"; depends=[]; };
|
|
|
|
sampleClassifierData = derive2 { name="sampleClassifierData"; version="1.22.0"; sha256="0ysf3mssn9mpkpcy1p4m93h7fc4finb8gnv73046bwmzc3nlysj8"; depends=[SummarizedExperiment]; };
|
|
|
|
scATAC_Explorer = derive2 { name="scATAC.Explorer"; version="1.4.0"; sha256="0nkr32jm772ksrc8yns1j4nbc4sc83hcw4v6l6imwm845dv8n4kz"; depends=[BiocFileCache data_table Matrix S4Vectors SingleCellExperiment]; };
|
|
|
|
scRNAseq = derive2 { name="scRNAseq"; version="2.12.0"; sha256="1kzsd2armxy4b8q574qc6wzjnf668y8zdp9mkqjnigsvfxnw65zb"; depends=[AnnotationDbi AnnotationHub BiocGenerics ensembldb ExperimentHub GenomicFeatures GenomicRanges S4Vectors SingleCellExperiment SummarizedExperiment]; };
|
|
|
|
scTHI_data = derive2 { name="scTHI.data"; version="1.10.0"; sha256="0a46f981h3b99qpys48845cy5a75bv07w64bbmzn9kxy12njdbwf"; depends=[]; };
|
|
|
|
scanMiRData = derive2 { name="scanMiRData"; version="1.4.0"; sha256="0ijb1m2fcvg02zhw8nxvbidl5j422p1szqii5xaqxwy7jq3hygdk"; depends=[scanMiR]; };
|
|
|
|
scpdata = derive2 { name="scpdata"; version="1.6.0"; sha256="0kmymij0zm9sramba3nmg88ci6dvypcf36lh9bmshn692cp0ga4s"; depends=[AnnotationHub ExperimentHub QFeatures S4Vectors SingleCellExperiment]; };
|
|
|
|
seq2pathway_data = derive2 { name="seq2pathway.data"; version="1.30.0"; sha256="058fi3p0kmvk7p7j81jgcysw17ws0ppnsfkxljp01w111aqlfgf2"; depends=[]; };
|
|
|
|
seqCNA_annot = derive2 { name="seqCNA.annot"; version="1.34.0"; sha256="16giir805vrqgfvvkrivh9jzd7kbblk3yk9ykqczsn6fjrmkbbac"; depends=[]; };
|
|
|
|
seqc = derive2 { name="seqc"; version="1.32.0"; sha256="1iz5d3snnk1zqiz90m3m29138wwh9zpv6lqqff1bphir0sn3dhk1"; depends=[Biobase]; };
|
|
|
|
serumStimulation = derive2 { name="serumStimulation"; version="1.34.0"; sha256="1x2ipkpgw8ln8n7s5naiw69vqk7jdqvbpvc3551i3fiph8dp5j7c"; depends=[]; };
|
|
|
|
sesameData = derive2 { name="sesameData"; version="1.16.0"; sha256="1a5aq0lzs5w2zrvdm3fwg34rx36ypzpzwhyrw2w1kfpdpnb41gpz"; depends=[AnnotationHub ExperimentHub GenomeInfoDb GenomicRanges IRanges readr S4Vectors stringr]; };
|
|
|
|
seventyGeneData = derive2 { name="seventyGeneData"; version="1.34.0"; sha256="08xfx7y42y7zhy7j5qjsvzgy71fi6zdzsnz8zidsrjqbvky5j0bw"; depends=[]; };
|
|
|
|
shinyMethylData = derive2 { name="shinyMethylData"; version="1.18.0"; sha256="1bwqfg29dghnr6d3ds4cj48w7azrmi0ichlvbpbvi4p5p0v06p4c"; depends=[]; };
|
|
|
|
signatureSearchData = derive2 { name="signatureSearchData"; version="1.12.0"; sha256="0s4pcfnkks8bw9igj5nx3b21zpyj3zzl4dy71wc5zfb9xdzbrkbg"; depends=[affy Biobase dplyr ExperimentHub limma magrittr R_utils rhdf5]; };
|
|
|
|
simpIntLists = derive2 { name="simpIntLists"; version="1.34.0"; sha256="02613cn3rix33pybf6da78yi76ccswr69mkcvhfx0h78hpgk9qy2"; depends=[]; };
|
|
|
|
spatialDmelxsim = derive2 { name="spatialDmelxsim"; version="1.4.0"; sha256="15ajjp19kfnfdddsrsgdkwa28f296xpb7jza51cnyix34n1xzrhi"; depends=[ExperimentHub SummarizedExperiment]; };
|
|
|
|
spatialLIBD = derive2 { name="spatialLIBD"; version="1.10.1"; sha256="0p88kl1l59iy0hs2jm4xg100lgnplzak6imq9pqirgnp0j5py4db"; depends=[AnnotationHub benchmarkme BiocFileCache BiocGenerics cowplot DT edgeR ExperimentHub fields GenomicRanges ggplot2 golem IRanges jsonlite limma magick Matrix paletteer plotly png RColorBrewer rtracklayer S4Vectors scater scuttle sessioninfo shiny shinyWidgets SingleCellExperiment SpatialExperiment statmod SummarizedExperiment tibble viridisLite]; };
|
|
|
|
spqnData = derive2 { name="spqnData"; version="1.10.0"; sha256="1wccrbnk1mgpi9hfk7agjyhlkv6awpmk1iaqng9m6540s51wqrb2"; depends=[SummarizedExperiment]; };
|
|
|
|
stemHypoxia = derive2 { name="stemHypoxia"; version="1.34.0"; sha256="177zrz7pg3i5rl2yl2mv8chasaa6kjanmqp1q1fn3lxb5w7cc12w"; depends=[]; };
|
|
|
|
stjudem = derive2 { name="stjudem"; version="1.38.0"; sha256="07hv42g9p2n2yflp5zfss3n8l1mbfvx70xrgd4jshrbf7vq52w7s"; depends=[]; };
|
|
|
|
synapterdata = derive2 { name="synapterdata"; version="1.36.0"; sha256="1bihd9xg92v62p20hfk0q00jvfbpzpz80qlsqh14h5dcn663ivc3"; depends=[synapter]; };
|
|
|
|
systemPipeRdata = derive2 { name="systemPipeRdata"; version="2.2.0"; sha256="1cywnnwxbwn1bfvha5dqc29lgb3q05hxdh0icql8w8lizv8z0zj6"; depends=[BiocGenerics Biostrings jsonlite remotes]; };
|
|
|
|
tartare = derive2 { name="tartare"; version="1.12.0"; sha256="1ygv0h8v7yll9b0kp0v8sclbhwwlkz062ycxg5qa0yzkbr5msysc"; depends=[AnnotationHub ExperimentHub]; };
|
|
|
|
timecoursedata = derive2 { name="timecoursedata"; version="1.8.0"; sha256="11kkf874757nka958vdg9nm4cqfv5rfy5jikm3bpw2k4bz5v3iwc"; depends=[SummarizedExperiment]; };
|
|
|
|
tinesath1cdf = derive2 { name="tinesath1cdf"; version="1.36.0"; sha256="0pax9b36bq64ry9wcpyrqlggqc2mfqxxp3yvv1hsxpsyb880xlmz"; depends=[]; };
|
|
|
|
tinesath1probe = derive2 { name="tinesath1probe"; version="1.36.0"; sha256="0rjq0rpm1bq8jb63qa8ywzi6dp4dvwn3hyx7qqmgb2dazymqz8hj"; depends=[AnnotationDbi]; };
|
|
|
|
tissueTreg = derive2 { name="tissueTreg"; version="1.18.0"; sha256="0wzxpi9ix1c6jk553vr87vhpfbigf4c280ynms4kl46rn63v3zvz"; depends=[]; };
|
|
|
|
tofsimsData = derive2 { name="tofsimsData"; version="1.26.0"; sha256="06wyfskxy4mr6bf9c2h4idc637x7dnrfm2affd0wvfggypi8nxh9"; depends=[]; };
|
|
|
|
topdownrdata = derive2 { name="topdownrdata"; version="1.20.0"; sha256="0hhl8wsj3x3ff9lv703qw9knyprm8ajlfbqqrlx37vkviwxb90zi"; depends=[topdownr]; };
|
|
|
|
tuberculosis = derive2 { name="tuberculosis"; version="1.4.0"; sha256="0qai1w2gvwr6kz8jgb0g8bdb56xsasd9z18fjn85z0k87ml9pnw6"; depends=[AnnotationHub dplyr ExperimentHub magrittr purrr rlang S4Vectors stringr SummarizedExperiment tibble tidyr]; };
|
|
|
|
tweeDEseqCountData = derive2 { name="tweeDEseqCountData"; version="1.36.0"; sha256="19n0gw60vv4kygckdcl70qy16gm1hcwv5zg4dgn1a6mxpj65ksn6"; depends=[Biobase]; };
|
|
|
|
tximportData = derive2 { name="tximportData"; version="1.26.0"; sha256="08xrfs8bca8vyh4wx5nd8mf7r8z3q46wflnrn2w57zavymgf8dqs"; depends=[]; };
|
|
|
|
vulcandata = derive2 { name="vulcandata"; version="1.20.0"; sha256="0r0bs5d27knwpgpnhszg925slxdha94nika533iv3ggkv5f4927v"; depends=[]; };
|
|
|
|
xcoredata = derive2 { name="xcoredata"; version="1.2.0"; sha256="0frv5xzqldxqylz82557acrnlzjakc3f1kpdbirvv19aj744x2h0"; depends=[ExperimentHub]; };
|
|
|
|
yeastCC = derive2 { name="yeastCC"; version="1.38.0"; sha256="0c8mx5amk60gdjmrxjvm9qnhfh6vsxlz7n96a8a45c2xdyrr9bbz"; depends=[Biobase]; };
|
|
|
|
yeastExpData = derive2 { name="yeastExpData"; version="0.44.0"; sha256="1z9hi3gflpj39ajg73gmyf1nx2sm0nl51fb5mb3giiwal1kp9js6"; depends=[graph]; };
|
|
|
|
yeastGSData = derive2 { name="yeastGSData"; version="0.36.0"; sha256="00z4yvmyqnvwvbnp79k5hn85q4k8g54d46v7nmbkwf0nspj381wb"; depends=[]; };
|
|
|
|
yeastNagalakshmi = derive2 { name="yeastNagalakshmi"; version="1.34.0"; sha256="03vdl4wh11s6yqj8j9ws8is2yq7awwlr4h6q426lww6hnkadfbyw"; depends=[]; };
|
|
|
|
yeastRNASeq = derive2 { name="yeastRNASeq"; version="0.36.0"; sha256="1vqpm9jjs3d7ab9vkan7622dlz0z6pjnjy0dcr3xl3nc23kbvg3l"; depends=[]; };
|
|
|
|
zebrafishRNASeq = derive2 { name="zebrafishRNASeq"; version="1.18.0"; sha256="1nmgh1v2sryhhx0zrysv54lwvk63sqhhsks5jrvahpqd64p4k3qk"; depends=[]; };
|
2022-06-16 17:23:12 +00:00
|
|
|
ABAData = derive2 { name="ABAData"; version="1.24.0"; sha256="1wgniq7ibvjj6dx63ixr3i5yclqmg94qpifzfbzzn9yjj3wnikzr"; depends=[]; broken = true; };
|
2022-12-28 21:21:41 +00:00
|
|
|
DREAM4 = derive2 { name="DREAM4"; version="1.31.0"; sha256="11ypc84agvq0q0v7bk0b25cm48awxay5hhhjd95gw9s7jk196i2p"; depends=[SummarizedExperiment]; broken = true; };
|
2021-12-06 16:07:01 +00:00
|
|
|
MAQCsubsetAFX = derive2 { name="MAQCsubsetAFX"; version="1.30.0"; sha256="14mwg96g7aza81vc3hpmb41scmygl8vnsi6s8p48c8v92106asmb"; depends=[affy Biobase]; broken = true; };
|
|
|
|
MSstatsBioData = derive2 { name="MSstatsBioData"; version="1.13.0"; sha256="1jzypgfmd6d0fdj9ycp4jwihjpxyinr5kwi2x2dg2z6hvxx97gb8"; depends=[]; broken = true; };
|
2022-06-16 17:23:12 +00:00
|
|
|
brainImageRdata = derive2 { name="brainImageRdata"; version="1.12.0"; sha256="072x7yn1ambf6hfpir6qdxl8bybv64blpbi1jdp0bvqlk66zs7zv"; depends=[ExperimentHub]; broken = true; };
|
2022-12-28 21:21:41 +00:00
|
|
|
ppiData = derive2 { name="ppiData"; version="0.34.0"; sha256="10xbp12wim5kj1h2vkxn9x22fd92s2038w653y81jwbh2hyidybf"; depends=[AnnotationDbi graph]; broken = true; };
|
2022-06-16 17:23:12 +00:00
|
|
|
tcgaWGBSData_hg19 = derive2 { name="tcgaWGBSData.hg19"; version="1.12.0"; sha256="1kmh4iyh2h7vc1mlwb3sridn4nwkqdschz5md5dk53mxkn2wxcmi"; depends=[bsseq ExperimentHub knitr]; broken = true; };
|
2020-04-24 23:36:52 +00:00
|
|
|
}
|