63 lines
1.1 KiB
Nix
63 lines
1.1 KiB
Nix
|
{ lib
|
||
|
|
, buildPythonPackage
|
||
|
|
, fetchFromGitHub
|
||
|
|
, looseversion
|
||
|
|
, mmtf-python
|
||
|
|
, nose
|
||
|
|
, numpy
|
||
|
|
, pandas
|
||
|
|
, pythonRelaxDepsHook
|
||
|
|
}:
|
||
|
|
|
||
|
|
buildPythonPackage rec {
|
||
|
|
pname = "biopandas";
|
||
|
|
version = "0.4.1";
|
||
|
|
format = "setuptools";
|
||
|
|
|
||
|
|
src = fetchFromGitHub {
|
||
|
|
owner = "BioPandas";
|
||
|
|
repo = "biopandas";
|
||
|
|
rev = "refs/tags/v${version}";
|
||
|
|
hash = "sha256-PRdemBo+bB2xJWmF2NylFTfNwEEo67i6XSaeDAFmQ/c=";
|
||
|
|
};
|
||
|
|
|
||
|
|
nativeBuildInputs = [
|
||
|
|
pythonRelaxDepsHook
|
||
|
|
];
|
||
|
|
|
||
|
|
pythonRelaxDeps = [
|
||
|
|
"looseversion"
|
||
|
|
];
|
||
|
|
|
||
|
|
propagatedBuildInputs = [
|
||
|
|
numpy
|
||
|
|
pandas
|
||
|
|
mmtf-python
|
||
|
|
looseversion
|
||
|
|
];
|
||
|
|
|
||
|
|
nativeCheckInputs = [
|
||
|
|
nose
|
||
|
|
];
|
||
|
|
|
||
|
|
checkPhase = ''
|
||
|
|
runHook preCheck
|
||
|
|
|
||
|
|
nosetests
|
||
|
|
|
||
|
|
runHook postCheck
|
||
|
|
'';
|
||
|
|
|
||
|
|
pythonImportsCheck = [
|
||
|
|
"biopandas"
|
||
|
|
];
|
||
|
|
|
||
|
|
meta = {
|
||
|
|
description = "Working with molecular structures in pandas DataFrames";
|
||
|
|
homepage = "https://github.com/BioPandas/biopandas";
|
||
|
|
changelog = "https://github.com/BioPandas/biopandas/releases/tag/${src.rev}";
|
||
|
|
license = lib.licenses.bsd3;
|
||
|
|
maintainers = with lib.maintainers; [ natsukium ];
|
||
|
|
};
|
||
|
|
}
|