2021-10-17 09:34:42 +00:00
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{ lib
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, stdenv
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2021-01-09 10:05:03 +00:00
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, fetchFromGitHub
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, zlib
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2021-10-17 09:34:42 +00:00
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, libdeflate
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, isa-l
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2021-01-09 10:05:03 +00:00
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}:
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stdenv.mkDerivation rec {
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pname = "fastp";
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2023-07-15 17:15:38 +00:00
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version = "0.23.4";
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2021-01-09 10:05:03 +00:00
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src = fetchFromGitHub {
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owner = "OpenGene";
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repo = "fastp";
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rev = "v${version}";
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2023-07-15 17:15:38 +00:00
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sha256 = "sha256-hkCo8CiZNJuVcL9Eg/R7YzM7/FEcGEnovV325oWa7y8=";
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2021-01-09 10:05:03 +00:00
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};
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2021-10-17 09:34:42 +00:00
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buildInputs = [ zlib libdeflate isa-l ];
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2021-01-09 10:05:03 +00:00
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installPhase = ''
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install -D fastp $out/bin/fastp
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'';
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2021-01-15 22:18:51 +00:00
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meta = with lib; {
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2021-01-09 10:05:03 +00:00
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description = "Ultra-fast all-in-one FASTQ preprocessor";
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2024-04-21 15:54:59 +00:00
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mainProgram = "fastp";
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2021-01-09 10:05:03 +00:00
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license = licenses.mit;
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homepage = "https://github.com/OpenGene/fastp";
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maintainers = with maintainers; [ jbedo ];
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platforms = platforms.x86_64;
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};
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}
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