depot/third_party/nixpkgs/pkgs/applications/science/biology/nest/default.nix

71 lines
1.5 KiB
Nix
Raw Normal View History

{ lib
, stdenv
, fetchFromGitHub
, testers
, cmake
, gsl
, libtool
, mpi
, nest
, pkg-config
, python3
, readline
, autoPatchelfHook
, withPython ? false
, withMpi ? false
}:
stdenv.mkDerivation rec {
pname = "nest";
version = "3.3";
src = fetchFromGitHub {
owner = "nest";
repo = "nest-simulator";
rev = "v${version}";
sha256 = "sha256-wmn5LOOHlSuyPdV6O6v7j10dxdcvqpym6MfveZdL+dU=";
};
postPatch = ''
patchShebangs cmake/CheckFiles/check_return_val.sh
# fix PyNEST installation path
# it expects CMAKE_INSTALL_LIBDIR to be relative
substituteInPlace cmake/ProcessOptions.cmake \
--replace "\''${CMAKE_INSTALL_LIBDIR}/python" "lib/python"
'';
nativeBuildInputs = [
cmake
pkg-config
autoPatchelfHook
];
buildInputs = [
gsl
readline
libtool # libltdl
] ++ lib.optionals withPython [
python3
python3.pkgs.cython
] ++ lib.optional withMpi mpi;
cmakeFlags = [
"-Dwith-python=${if withPython then "ON" else "OFF"}"
"-Dwith-mpi=${if withMpi then "ON" else "OFF"}"
"-Dwith-openmp=${if stdenv.isDarwin then "OFF" else "ON"}"
];
passthru.tests.version = testers.testVersion {
package = nest;
command = "nest --version";
};
meta = with lib; {
description = "NEST is a command line tool for simulating neural networks";
homepage = "https://www.nest-simulator.org/";
license = licenses.gpl2;
maintainers = with maintainers; [ jiegec ];
platforms = platforms.unix;
};
}