30 lines
755 B
Nix
30 lines
755 B
Nix
|
{ lib, stdenv, fetchFromGitHub }:
|
||
|
|
|
||
|
|
stdenv.mkDerivation rec {
|
||
|
|
pname = "samblaster";
|
||
|
|
version = "0.1.26";
|
||
|
|
|
||
|
|
src = fetchFromGitHub {
|
||
|
|
owner = "GregoryFaust";
|
||
|
|
repo = "samblaster";
|
||
|
|
rev = "v.${version}";
|
||
|
|
sha256 = "0g24fq5hplnfgqkh3xqpg3lgx3wmxwnh9c7m6yw7pbi40lmgl1jv";
|
||
|
|
};
|
||
|
|
|
||
|
|
makeFlags = [ "CPP=${stdenv.cc.targetPrefix}c++" ];
|
||
|
|
|
||
|
|
installPhase = ''
|
||
|
|
mkdir -p $out/bin
|
||
|
|
cp samblaster $out/bin
|
||
|
|
'';
|
||
|
|
|
||
|
|
meta = with lib; {
|
||
|
|
description = "Tool for marking duplicates and extracting discordant/split reads from SAM/BAM files";
|
||
|
|
mainProgram = "samblaster";
|
||
|
|
maintainers = with maintainers; [ jbedo ];
|
||
|
|
license = licenses.mit;
|
||
|
|
homepage = "https://github.com/GregoryFaust/samblaster";
|
||
|
|
platforms = platforms.x86_64;
|
||
|
|
};
|
||
|
|
}
|