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GitOrigin-RevId: bd017760509492a1774b0ea2fc5c1bbb4b2d98af
This commit is contained in:
Default email 2020-10-20 19:27:49 +02:00
parent 02a8431f10
commit b087c617d3
53 changed files with 7394 additions and 6204 deletions
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6
third_party/nixpkgs/maintainers/maintainer-list.nix vendored
View file

@ -520,6 +520,12 @@
githubId = 293191;
name = "Andres Loeh";
};
andresilva = {
email = "andre.beat@gmail.com";
github = "andresilva";
githubId = 123550;
name = "André Silva";
};
andrestylianos = {
email = "andre.stylianos@gmail.com";
github = "andrestylianos";

14
third_party/nixpkgs/nixos/modules/config/users-groups.nix vendored
View file

@ -139,6 +139,20 @@ let
'';
};
pamMount = mkOption {
type = with types; attrsOf str;
default = {};
description = ''
Attributes for user's entry in
<filename>pam_mount.conf.xml</filename>.
Useful attributes might include <code>path</code>,
<code>options</code>, <code>fstype</code>, and <code>server</code>.
See <link
xlink:href="http://pam-mount.sourceforge.net/pam_mount.conf.5.html" />
for more information.
'';
};
shell = mkOption {
type = types.either types.shellPackage types.path;
default = pkgs.shadow;

12
third_party/nixpkgs/nixos/modules/security/pam_mount.nix vendored
View file

@ -39,8 +39,16 @@ in
environment.etc."security/pam_mount.conf.xml" = {
source =
let
extraUserVolumes = filterAttrs (n: u: u.cryptHomeLuks != null) config.users.users;
userVolumeEntry = user: "<volume user=\"${user.name}\" path=\"${user.cryptHomeLuks}\" mountpoint=\"${user.home}\" />\n";
extraUserVolumes = filterAttrs (n: u: u.cryptHomeLuks != null || u.pamMount != {}) config.users.users;
mkAttr = k: v: ''${k}="${v}"'';
userVolumeEntry = user: let
attrs = {
user = user.name;
path = user.cryptHomeLuks;
mountpoint = user.home;
} // user.pamMount;
in
"<volume ${concatStringsSep " " (mapAttrsToList mkAttr attrs)} />\n";
in
pkgs.writeText "pam_mount.conf.xml" ''
<?xml version="1.0" encoding="utf-8" ?>

4
third_party/nixpkgs/nixos/modules/system/boot/initrd-network.nix vendored
View file

@ -32,8 +32,8 @@ let
fi
if [ -n "$dns" ]; then
rm -f /etc/resolv.conf
for i in $dns; do
echo "nameserver $dns" >> /etc/resolv.conf
for server in $dns; do
echo "nameserver $server" >> /etc/resolv.conf
done
fi
fi

58
third_party/nixpkgs/nixos/modules/virtualisation/vagrant-guest.nix vendored Normal file
View file

@ -0,0 +1,58 @@
# Minimal configuration that vagrant depends on
{ config, pkgs, ... }:
let
# Vagrant uses an insecure shared private key by default, but we
# don't use the authorizedKeys attribute under users because it should be
# removed on first boot and replaced with a random one. This script sets
# the correct permissions and installs the temporary key if no
# ~/.ssh/authorized_keys exists.
install-vagrant-ssh-key = pkgs.writeScriptBin "install-vagrant-ssh-key" ''
#!${pkgs.runtimeShell}
if [ ! -e ~/.ssh/authorized_keys ]; then
mkdir -m 0700 -p ~/.ssh
echo "ssh-rsa AAAAB3NzaC1yc2EAAAABIwAAAQEA6NF8iallvQVp22WDkTkyrtvp9eWW6A8YVr+kz4TjGYe7gHzIw+niNltGEFHzD8+v1I2YJ6oXevct1YeS0o9HZyN1Q9qgCgzUFtdOKLv6IedplqoPkcmF0aYet2PkEDo3MlTBckFXPITAMzF8dJSIFo9D8HfdOV0IAdx4O7PtixWKn5y2hMNG0zQPyUecp4pzC6kivAIhyfHilFR61RGL+GPXQ2MWZWFYbAGjyiYJnAmCP3NOTd0jMZEnDkbUvxhMmBYSdETk1rRgm+R4LOzFUGaHqHDLKLX+FIPKcF96hrucXzcWyLbIbEgE98OHlnVYCzRdK8jlqm8tehUc9c9WhQ== vagrant insecure public key" >> ~/.ssh/authorized_keys
chmod 0600 ~/.ssh/authorized_keys
fi
'';
in
{
# Enable the OpenSSH daemon.
services.openssh.enable = true;
# Packages used by Vagrant
environment.systemPackages = with pkgs; [
findutils
iputils
nettools
netcat
nfs-utils
rsync
];
users.extraUsers.vagrant = {
isNormalUser = true;
createHome = true;
description = "Vagrant user account";
extraGroups = [ "users" "wheel" ];
home = "/home/vagrant";
password = "vagrant";
useDefaultShell = true;
uid = 1000;
};
systemd.services.install-vagrant-ssh-key = {
description = "Vagrant SSH key install (if needed)";
after = [ "fs.target" ];
wants = [ "fs.target" ];
wantedBy = [ "multi-user.target" ];
serviceConfig = {
ExecStart = "${install-vagrant-ssh-key}/bin/install-vagrant-ssh-key";
User = "vagrant";
# So it won't be (needlessly) restarted:
RemainAfterExit = true;
};
};
security.sudo.wheelNeedsPassword = false;
}

60
third_party/nixpkgs/nixos/modules/virtualisation/vagrant-virtualbox-image.nix vendored Normal file
View file

@ -0,0 +1,60 @@
# Vagrant + VirtualBox
{ config, pkgs, ... }:
{
imports = [
./vagrant-guest.nix
./virtualbox-image.nix
];
virtualbox.params = {
audio = "none";
audioin = "off";
audioout = "off";
usb = "off";
usbehci = "off";
};
sound.enable = false;
documentation.man.enable = false;
documentation.nixos.enable = false;
users.extraUsers.vagrant.extraGroups = [ "vboxsf" ];
# generate the box v1 format which is much easier to generate
# https://www.vagrantup.com/docs/boxes/format.html
system.build.vagrantVirtualbox = pkgs.runCommand
"virtualbox-vagrant.box"
{}
''
mkdir workdir
cd workdir
# 1. create that metadata.json file
echo '{"provider":"virtualbox"}' > metadata.json
# 2. create a default Vagrantfile config
cat <<VAGRANTFILE > Vagrantfile
Vagrant.configure("2") do |config|
config.vm.base_mac = "0800275F0936"
end
VAGRANTFILE
# 3. add the exported VM files
tar xvf ${config.system.build.virtualBoxOVA}/*.ova
# 4. move the ovf to the fixed location
mv *.ovf box.ovf
# 5. generate OVF manifest file
rm *.mf
touch box.mf
for fname in *; do
checksum=$(sha256sum $fname | cut -d' ' -f 1)
echo "SHA256($fname)= $checksum" >> box.mf
done
# 6. compress everything back together
tar --owner=0 --group=0 --sort=name --numeric-owner -czf $out .
'';
}

7
third_party/nixpkgs/nixos/tests/avahi.nix vendored
View file

@ -2,10 +2,11 @@
, config ? {}
, pkgs ? import ../.. { inherit system config; }
# bool: whether to use networkd in the tests
, networkd ? false }:
, networkd ? false
} @ args:
# Test whether `avahi-daemon' and `libnss-mdns' work as expected.
import ./make-test-python.nix ({ ... } : {
import ./make-test-python.nix {
name = "avahi";
meta = with pkgs.stdenv.lib.maintainers; {
maintainers = [ eelco ];
@ -75,4 +76,4 @@ import ./make-test-python.nix ({ ... } : {
two.succeed("avahi-browse -r -t _ssh._tcp | tee out >&2")
two.succeed("test `wc -l < out` -gt 0")
'';
})
} args

4
third_party/nixpkgs/pkgs/applications/audio/faust/faust2jack.nix vendored
View file

@ -2,7 +2,7 @@
, gtk2
, jack2Full
, alsaLib
, opencv2
, opencv
, libsndfile
, which
}:
@ -20,7 +20,7 @@ faust.wrapWithBuildEnv {
gtk2
jack2Full
alsaLib
opencv2
opencv
libsndfile
which
];

2
third_party/nixpkgs/pkgs/applications/audio/faust/faust2jaqt.nix vendored
View file

@ -1,6 +1,5 @@
{ faust
, jack2Full
, opencv2
, qt4
, libsndfile
, alsaLib
@ -18,7 +17,6 @@ faust.wrapWithBuildEnv {
propagatedBuildInputs = [
jack2Full
opencv2
qt4
libsndfile
alsaLib

4
third_party/nixpkgs/pkgs/applications/blockchains/go-ethereum.nix vendored
View file

@ -2,13 +2,13 @@
buildGoModule rec {
pname = "go-ethereum";
version = "1.9.22";
version = "1.9.23";
src = fetchFromGitHub {
owner = "ethereum";
repo = pname;
rev = "v${version}";
sha256 = "08i31xil2lygfcn2igsvn4hpg8xnf8l6g914f78hgl4wj6v1dja9";
sha256 = "0w65sln5l3sxwzxwjvyaial0m1kxhivhw8xwl5faxxxlk50rs4wm";
};
runVend = true;

44
third_party/nixpkgs/pkgs/applications/blockchains/polkadot/default.nix vendored
View file

@ -1,37 +1,43 @@
{ stdenv
{ clang
, fetchFromGitHub
, lib
, llvmPackages
, protobuf
, rustPlatform
, pkgconfig
, openssl
}:
rustPlatform.buildRustPackage rec {
pname = "polkadot";
version = "0.2.17";
version = "0.8.24";
src = fetchFromGitHub {
owner = "paritytech";
# N.B. In 2018, the thing that was "polkadot" was split off into its own
# repo, so if this package is ever updated it should be changed to
# paritytech/polkadot, as per comment here:
# https://github.com/paritytech/polkadot#note
repo = "substrate";
rev = "19f4f4d4df3bb266086b4e488739f73d3d5e588c";
sha256 = "0v7g03rbml2afw0splmyjh9nqpjg0ldjw09hyc0jqd3qlhgxiiyj";
repo = "polkadot";
rev = "v${version}";
sha256 = "15q5scajxrf82k8nxysah8cs3yl2p09xzzwlkxvjkcn08r3zhig6";
};
cargoSha256 = "1h5v7c7xi2r2wzh1pj6xidrg7dx23w3rjm88mggpq7574arijk4i";
cargoSha256 = "0qp20g5c15qzp2n1nzwqbnn2wx6c905vh652nvkm7sb1d901iiqi";
buildInputs = [ pkgconfig openssl openssl.dev ];
cargoPatches = [ ./substrate-wasm-builder-runner.patch ];
meta = with stdenv.lib; {
nativeBuildInputs = [ clang ];
LIBCLANG_PATH = "${llvmPackages.libclang}/lib";
PROTOC = "${protobuf}/bin/protoc";
# NOTE: We don't build the WASM runtimes since this would require a more
# complicated rust environment setup. The resulting binary is still useful for
# live networks since those just use the WASM blob from the network chainspec.
BUILD_DUMMY_WASM_BINARY = 1;
# We can't run the test suite since we didn't compile the WASM runtimes.
doCheck = false;
meta = with lib; {
description = "Polkadot Node Implementation";
homepage = "https://polkadot.network";
license = licenses.gpl3;
maintainers = [ maintainers.akru ];
maintainers = with maintainers; [ akru andresilva ];
platforms = platforms.linux;
# Last attempt at building this was on v0.7.22
# https://github.com/paritytech/polkadot/releases
broken = true;
};
}

25
third_party/nixpkgs/pkgs/applications/blockchains/polkadot/substrate-wasm-builder-runner.patch vendored Normal file
View file

@ -0,0 +1,25 @@
diff --git a/Cargo.lock b/Cargo.lock
index 5e7c4a14..bb67aada 100644
--- a/Cargo.lock
+++ b/Cargo.lock
@@ -8642,8 +8642,7 @@ dependencies = [
[[package]]
name = "substrate-wasm-builder-runner"
version = "1.0.6"
-source = "registry+https://github.com/rust-lang/crates.io-index"
-checksum = "d2a965994514ab35d3893e9260245f2947fd1981cdd4fffd2c6e6d1a9ce02e6a"
+source = "git+https://github.com/paritytech/substrate#647ad15565d7c35ecf00b73b12cccad9858780b9"
[[package]]
name = "subtle"
diff --git a/Cargo.toml b/Cargo.toml
index 78047a1a..2d571f8e 100644
--- a/Cargo.toml
+++ b/Cargo.toml
@@ -112,3 +112,6 @@ polkadot = { path = "/usr/bin/polkadot" }
[package.metadata.rpm.files]
"../scripts/packaging/polkadot.service" = { path = "/usr/lib/systemd/system/polkadot.service", mode = "644" }
+
+[patch.crates-io]
+substrate-wasm-builder-runner = { git = "https://github.com/paritytech/substrate", branch = "master" }

9
third_party/nixpkgs/pkgs/applications/editors/neovim/wrapper.nix vendored
View file

@ -1,5 +1,6 @@
{ stdenv, symlinkJoin, lib, makeWrapper
, vimUtils
, writeText
, bundlerEnv, ruby
, nodejs
, nodePackages
@ -110,9 +111,9 @@ let
# https://github.com/neovim/neovim/issues/9413
++ lib.optionals (configure != {}) [
"--set" "NVIM_SYSTEM_RPLUGIN_MANIFEST" "${placeholder "out"}/rplugin.vim"
"--add-flags" "-u ${vimUtils.vimrcFile configure}"
]
;
"--add-flags" "-u ${configFile}"
];
configFile = writeText "init.vim" "${vimUtils.vimrcContent configure}";
in
symlinkJoin {
name = "neovim-${stdenv.lib.getVersion neovim}";
@ -181,7 +182,7 @@ let
preferLocalBuild = true;
buildInputs = [makeWrapper];
passthru = { unwrapped = neovim; };
passthru = { unwrapped = neovim; inherit configFile; };
meta = neovim.meta // {
# To prevent builds on hydra

54
third_party/nixpkgs/pkgs/applications/editors/texmacs/default.nix vendored
View file

@ -1,5 +1,5 @@
{ stdenv, callPackage,
fetchurl, guile_1_8, qt4, xmodmap, which, makeWrapper, freetype,
{ lib, mkDerivation, callPackage, fetchurl, fetchpatch,
guile_1_8, qtbase, xmodmap, which, freetype,
libjpeg,
sqlite,
tex ? null,
@ -16,23 +16,30 @@
let
pname = "TeXmacs";
version = "1.99.11";
version = "1.99.13";
common = callPackage ./common.nix {
inherit tex extraFonts chineseFonts japaneseFonts koreanFonts;
};
in
stdenv.mkDerivation {
mkDerivation {
name = "${pname}-${version}";
src = fetchurl {
url = "https://www.texmacs.org/Download/ftp/tmftp/source/TeXmacs-${version}-src.tar.gz";
sha256 = "12bp0f34izzqimz49lfpgf4lyz3h45s9xbmk8v6zsawdjki76alg";
sha256 = "Aq0cS47QqmFQHelxRjANeJlgXCXagnYRykpAq7wHqbQ=";
};
cmakeFlags = [
# Texmacs' cmake build as of writing defaults to Qt5,
# but we haven't updated to that yet.
"-DTEXMACS_GUI=Qt4"
patches = [
# Minor patch for Qt 5.15 support, should be included in next release.
(fetchpatch {
url = "https://github.com/texmacs/texmacs/commit/3cf56af92326b74538f5e943928199ba6e963d0b.patch";
sha256 = "+OBQmnKgvQZZkLx6ea773Dwq0o7L92Sex/kcVUhmg6Q=";
})
# Fix returned version, lets hope they remember to bump the version next release.
(fetchpatch {
url = "https://github.com/texmacs/texmacs/commit/da5b67005d2fc31bb32ea1ead882c26af12d8cbb.patch";
sha256 = "czMgdraQErrdvN83jY76P673L52BpQkDwntmKvF0Ykg=";
})
];
enableParallelBuilding = true;
@ -40,8 +47,7 @@ stdenv.mkDerivation {
nativeBuildInputs = [ cmake pkgconfig ];
buildInputs = [
guile_1_8
qt4
makeWrapper
qtbase
ghostscriptX
freetype
libjpeg
@ -51,18 +57,26 @@ stdenv.mkDerivation {
];
NIX_LDFLAGS = "-lz";
postInstall = "wrapProgram $out/bin/texmacs --suffix PATH : " +
(if ghostscriptX == null then "" else "${ghostscriptX}/bin:") +
(if aspell == null then "" else "${aspell}/bin:") +
(if tex == null then "" else "${tex}/bin:") +
(if git == null then "" else "${git}/bin:") +
(if python3 == null then "" else "${python3}/bin:") +
"${xmodmap}/bin:${which}/bin";
qtWrapperArgs = [
"--suffix" "PATH" ":" (lib.makeBinPath [
xmodmap
which
ghostscriptX
aspell
tex
git
python3
])
];
postFixup = ''
wrapQtApp $out/bin/texmacs
'';
inherit (common) postPatch;
meta = common.meta // {
maintainers = [ stdenv.lib.maintainers.roconnor ];
platforms = stdenv.lib.platforms.gnu ++ stdenv.lib.platforms.linux; # arbitrary choice
maintainers = [ lib.maintainers.roconnor ];
platforms = lib.platforms.gnu ++ lib.platforms.linux; # arbitrary choice
};
}

4
third_party/nixpkgs/pkgs/applications/misc/ArchiSteamFarm/default.nix vendored
View file

@ -2,11 +2,11 @@
stdenv.mkDerivation rec {
pname = "ArchiSteamFarm";
version = "4.3.0.6";
version = "4.3.1.0";
src = fetchurl {
url = "https://github.com/JustArchiNET/ArchiSteamFarm/releases/download/${version}/ASF-generic.zip";
sha256 = "1i8cb9j1dk2ikrdr11gah48wrsmw52gj70pv7yml1pzb435madm8";
sha256 = "1q28byshh4wkfsfdb0sfdqq9a5da9k7i4nagsfpk0fzyajvzd4lx";
};
nativeBuildInputs = [ unzip makeWrapper jq ];

64
third_party/nixpkgs/pkgs/applications/networking/browsers/firefox/common.nix vendored
View file

@ -9,8 +9,9 @@
, hunspell, libXdamage, libevent, libstartup_notification
, libvpx_1_8
, icu67, libpng, jemalloc, glib
, autoconf213, which, gnused, cargo, rustc, llvmPackages
, autoconf213, which, gnused, cargo, rustc
, rust-cbindgen, nodejs, nasm, fetchpatch
, gnum4
, debugBuild ? false
### optionals
@ -22,6 +23,7 @@
, ffmpegSupport ? true
, gtk3Support ? true, gtk2, gtk3, wrapGAppsHook
, waylandSupport ? true, libxkbcommon
, ltoSupport ? stdenv.isLinux, overrideCC, buildPackages
, gssSupport ? true, kerberos
, pipewireSupport ? waylandSupport && webrtcSupport, pipewire
@ -71,6 +73,7 @@
assert stdenv.cc.libc or null != null;
assert pipewireSupport -> !waylandSupport || !webrtcSupport -> throw "pipewireSupport requires both wayland and webrtc support.";
assert ltoSupport -> stdenv.isDarwin -> throw "LTO is broken on Darwin (see PR#19312).";
let
flag = tf: x: [(if tf then "--enable-${x}" else "--disable-${x}")];
@ -87,9 +90,20 @@ let
then "/Applications/${binaryNameCapitalized}.app/Contents/MacOS"
else "/bin";
# Darwin's stdenv provides the default llvmPackages version, match that since
# clang LTO on Darwin is broken so the stdenv is not being changed.
llvmPackages = if stdenv.isDarwin
then buildPackages.llvmPackages
else buildPackages.llvmPackages_10;
# When LTO for Darwin is fixed, the following will need updating as lld
# doesn't work on it. For now it is fine since ltoSupport implies no Darwin.
buildStdenv = if ltoSupport
then overrideCC stdenv llvmPackages.lldClang
else stdenv;
in
stdenv.mkDerivation ({
buildStdenv.mkDerivation ({
name = "${pname}-unwrapped-${ffversion}";
version = ffversion;
@ -131,11 +145,18 @@ stdenv.mkDerivation ({
++ lib.optional pulseaudioSupport libpulseaudio # only headers are needed
++ lib.optional gtk3Support gtk3
++ lib.optional gssSupport kerberos
++ lib.optional ltoSupport llvmPackages.libunwind
++ lib.optionals waylandSupport [ libxkbcommon ]
++ lib.optionals pipewireSupport [ pipewire ]
++ lib.optionals stdenv.isDarwin [ CoreMedia ExceptionHandling Kerberos
AVFoundation MediaToolbox CoreLocation
Foundation libobjc AddressBook cups ];
++ lib.optionals (lib.versionAtLeast ffversion "82") [ gnum4 ]
++ lib.optionals buildStdenv.isDarwin [ CoreMedia ExceptionHandling Kerberos
AVFoundation MediaToolbox CoreLocation
Foundation libobjc AddressBook cups ];
NIX_LDFLAGS = lib.optionalString ltoSupport ''
-rpath ${placeholder "out"}/lib/${binaryName}
-rpath ${llvmPackages.libunwind.out}/lib
'';
NIX_CFLAGS_COMPILE = toString [
"-I${glib.dev}/include/gio-unix-2.0"
@ -179,7 +200,7 @@ stdenv.mkDerivation ({
which
]
++ lib.optional gtk3Support wrapGAppsHook
++ lib.optionals stdenv.isDarwin [ xcbuild rsync ]
++ lib.optionals buildStdenv.isDarwin [ xcbuild rsync ]
++ extraNativeBuildInputs;
preConfigure = ''
@ -197,12 +218,12 @@ stdenv.mkDerivation ({
# included we need to look in a few places.
# TODO: generalize this process for other use-cases.
BINDGEN_CFLAGS="$(< ${stdenv.cc}/nix-support/libc-crt1-cflags) \
$(< ${stdenv.cc}/nix-support/libc-cflags) \
$(< ${stdenv.cc}/nix-support/cc-cflags) \
$(< ${stdenv.cc}/nix-support/libcxx-cxxflags) \
${lib.optionalString stdenv.cc.isClang "-idirafter ${stdenv.cc.cc}/lib/clang/${lib.getVersion stdenv.cc.cc}/include"} \
${lib.optionalString stdenv.cc.isGNU "-isystem ${stdenv.cc.cc}/include/c++/${lib.getVersion stdenv.cc.cc} -isystem ${stdenv.cc.cc}/include/c++/${lib.getVersion stdenv.cc.cc}/${stdenv.hostPlatform.config}"} \
BINDGEN_CFLAGS="$(< ${buildStdenv.cc}/nix-support/libc-crt1-cflags) \
$(< ${buildStdenv.cc}/nix-support/libc-cflags) \
$(< ${buildStdenv.cc}/nix-support/cc-cflags) \
$(< ${buildStdenv.cc}/nix-support/libcxx-cxxflags) \
${lib.optionalString buildStdenv.cc.isClang "-idirafter ${buildStdenv.cc.cc}/lib/clang/${lib.getVersion buildStdenv.cc.cc}/include"} \
${lib.optionalString buildStdenv.cc.isGNU "-isystem ${buildStdenv.cc.cc}/include/c++/${lib.getVersion buildStdenv.cc.cc} -isystem ${buildStdenv.cc.cc}/include/c++/${lib.getVersion buildStdenv.cc.cc}/${buildStdenv.hostPlatform.config}"} \
$NIX_CFLAGS_COMPILE"
echo "ac_add_options BINDGEN_CFLAGS='$BINDGEN_CFLAGS'" >> $MOZCONFIG
@ -236,11 +257,20 @@ stdenv.mkDerivation ({
"--enable-jemalloc"
"--enable-default-toolkit=${default-toolkit}"
"--with-libclang-path=${llvmPackages.libclang}/lib"
"--with-clang-path=${llvmPackages.clang}/bin/clang"
"--with-system-nspr"
"--with-system-nss"
]
++ lib.optional (stdenv.isDarwin) "--disable-xcode-checks"
++ lib.optional (buildStdenv.isDarwin) "--disable-xcode-checks"
++ lib.optional (!ltoSupport) "--with-clang-path=${llvmPackages.clang}/bin/clang"
# LTO is done using clang and lld on Linux.
# Darwin needs to use the default linker as lld is not supported (yet?):
# https://bugzilla.mozilla.org/show_bug.cgi?id=1538724
# elf-hack is broken when using clang+lld:
# https://bugzilla.mozilla.org/show_bug.cgi?id=1482204
++ lib.optionals ltoSupport [
"--enable-lto"
"--disable-elf-hack"
] ++ lib.optional (ltoSupport && !buildStdenv.isDarwin) "--enable-linker=lld"
++ flag alsaSupport "alsa"
++ flag pulseaudioSupport "pulseaudio"
@ -270,12 +300,12 @@ stdenv.mkDerivation ({
enableParallelBuilding = true;
doCheck = false; # "--disable-tests" above
installPhase = if stdenv.isDarwin then ''
installPhase = if buildStdenv.isDarwin then ''
mkdir -p $out/Applications
cp -LR dist/${binaryNameCapitalized}.app $out/Applications
'' else null;
postInstall = lib.optionalString stdenv.isLinux ''
postInstall = lib.optionalString buildStdenv.isLinux ''
# Remove SDK cruft. FIXME: move to a separate output?
rm -rf $out/share/idl $out/include $out/lib/${binaryName}-devel-*
@ -283,7 +313,7 @@ stdenv.mkDerivation ({
gappsWrapperArgs+=(--argv0 "$out/bin/.${binaryName}-wrapped")
'';
postFixup = lib.optionalString stdenv.isLinux ''
postFixup = lib.optionalString buildStdenv.isLinux ''
# Fix notifications. LibXUL uses dlopen for this, unfortunately; see #18712.
patchelf --set-rpath "${lib.getLib libnotify
}/lib:$(patchelf --print-rpath "$out"/lib/${binaryName}*/libxul.so)" \

8
third_party/nixpkgs/pkgs/applications/networking/browsers/firefox/packages.nix vendored
View file

@ -7,10 +7,10 @@ in
rec {
firefox = common rec {
pname = "firefox";
ffversion = "81.0.2";
ffversion = "82.0";
src = fetchurl {
url = "mirror://mozilla/firefox/releases/${ffversion}/source/firefox-${ffversion}.source.tar.xz";
sha512 = "1szsj7rwpn7ggiavvnc38a75ip0r3p5bgr2kvy2hq7519abzmr3z49jg4alpsy1ndkfylvh28zjw9h5xys0bvs40f33ps90j60z8gla";
sha512 = "3lbvlb6yggd5v0pkr0x6j350jc5dpclqz7bv4i06r97a5ijdgfc7c6y605966hvw24v17byxr120xc7a39ikl1wnls7a9gyzyqcwyw8";
};
patches = [
@ -36,10 +36,10 @@ rec {
firefox-esr-78 = common rec {
pname = "firefox-esr";
ffversion = "78.3.1esr";
ffversion = "78.4.0esr";
src = fetchurl {
url = "mirror://mozilla/firefox/releases/${ffversion}/source/firefox-${ffversion}.source.tar.xz";
sha512 = "10a7xfp396n81aj17fbl1b1jr8gbn5ild2ig5cfz6r5ff3wfbjs3x0iqrlwqnjfdqq2pw19k2yrv91iwymd8jwjj4p35xsfivgn0a0n";
sha512 = "13640ssp1nq9dsfv8jqfw2paqk3wzwc4r47mvbhb4l9h990gzzb2chhlcjq066b7r3q9s0nq3iyk847vzi7z1yvhrhsnzfgk9g9gpnr";
};
patches = [

530
third_party/nixpkgs/pkgs/applications/networking/mailreaders/thunderbird-bin/release_sources.nix vendored
View file

@ -1,665 +1,665 @@
{
version = "78.3.2";
version = "78.3.3";
sources = [
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.2/linux-x86_64/af/thunderbird-78.3.2.tar.bz2";
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.3/linux-x86_64/af/thunderbird-78.3.3.tar.bz2";
locale = "af";
arch = "linux-x86_64";
sha256 = "928a2aa2fefa53f088ca8122010732bf12ad660e6bd434cfa8062fd9450d6886";
sha256 = "a642dc83f38dd55cf53b2c1bab5047b4ab22d8ba81c94cd7b8569b73665fd2c3";
}
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.2/linux-x86_64/ar/thunderbird-78.3.2.tar.bz2";
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.3/linux-x86_64/ar/thunderbird-78.3.3.tar.bz2";
locale = "ar";
arch = "linux-x86_64";
sha256 = "fd7cda5dadb0233067e6ac1c19ea556fa0d4503ff04c0acaf75532bc149eabca";
sha256 = "a137ad7aacb57196350e82b80aa8316c77e55c3ee1c45daa025ef2006320a7fd";
}
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.2/linux-x86_64/ast/thunderbird-78.3.2.tar.bz2";
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.3/linux-x86_64/ast/thunderbird-78.3.3.tar.bz2";
locale = "ast";
arch = "linux-x86_64";
sha256 = "cd23011acdae26cea8e37cab52e174f559e26c033e2a335bef1fb8fc74c3e6e7";
sha256 = "8120fed1e1228d8dbf332cfa46152714bd9b52c898b02794d6c81a4f46dae360";
}
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.2/linux-x86_64/be/thunderbird-78.3.2.tar.bz2";
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.3/linux-x86_64/be/thunderbird-78.3.3.tar.bz2";
locale = "be";
arch = "linux-x86_64";
sha256 = "4c8703308ad7f26bfe28e8d602a36a379d3f0baf0c14a421c02a73a034c2aaaa";
sha256 = "20a36150e399a8471ff1cda2b31db79218afc4eacda04b432e946708b93e9c08";
}
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.2/linux-x86_64/bg/thunderbird-78.3.2.tar.bz2";
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.3/linux-x86_64/bg/thunderbird-78.3.3.tar.bz2";
locale = "bg";
arch = "linux-x86_64";
sha256 = "eea7b06f9d4dc03b675fc8f7c86eb72a900a88925a6d824983d513539d05f9fb";
sha256 = "b322427574e3d3e8e96fc7550ac68b54ca57ea5568b0e159304b5a5436529253";
}
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.2/linux-x86_64/br/thunderbird-78.3.2.tar.bz2";
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.3/linux-x86_64/br/thunderbird-78.3.3.tar.bz2";
locale = "br";
arch = "linux-x86_64";
sha256 = "a28f92a5237722e00913d2a7b9bb597ce94094f4609c53af2cb6542251957247";
sha256 = "1dd56ad96720503f4b7250efba31d8364ca747233f47450f6446f003b34319dc";
}
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.2/linux-x86_64/ca/thunderbird-78.3.2.tar.bz2";
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.3/linux-x86_64/ca/thunderbird-78.3.3.tar.bz2";
locale = "ca";
arch = "linux-x86_64";
sha256 = "b574e593656c978689e924fa2f87591395f5fb0221dd8f5cb158356bd153c5ea";
sha256 = "1d1481f9bd01a849f0c6efc15c08a9536aad205d89b0e09facd55a0eb937e8df";
}
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.2/linux-x86_64/cak/thunderbird-78.3.2.tar.bz2";
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.3/linux-x86_64/cak/thunderbird-78.3.3.tar.bz2";
locale = "cak";
arch = "linux-x86_64";
sha256 = "3ad3fc4ec3b45be4b3ec5e8196b558d37c6a008139aa0c8e21ee1f734ae1c8dc";
sha256 = "c94547846047671ad7478d3475d2fcffb4c3939a38cfcaa843e56b59ff8a40dc";
}
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.2/linux-x86_64/cs/thunderbird-78.3.2.tar.bz2";
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.3/linux-x86_64/cs/thunderbird-78.3.3.tar.bz2";
locale = "cs";
arch = "linux-x86_64";
sha256 = "272f9f732266f6db4b446274c02210617b9c0ae7f406e589b68a3553f0ed8a1b";
sha256 = "a0dcc3a38b0b698c727ebb10a5c388789be407ba314d9266b3edacfa0a0598c8";
}
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.2/linux-x86_64/cy/thunderbird-78.3.2.tar.bz2";
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.3/linux-x86_64/cy/thunderbird-78.3.3.tar.bz2";
locale = "cy";
arch = "linux-x86_64";
sha256 = "dd4cf52fcfefa2a45a19cedf6d6d8e3c083cfc7e87fd103afb472f31e6ae7c5b";
sha256 = "e61cb6c0c075437c3c78a5d67ce45953d313ca12cb8379494f376772e1fa2d34";
}
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.2/linux-x86_64/da/thunderbird-78.3.2.tar.bz2";
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.3/linux-x86_64/da/thunderbird-78.3.3.tar.bz2";
locale = "da";
arch = "linux-x86_64";
sha256 = "bb8260f9fe22408f4811f5e7a93890ebd9a8f13ad50c511c507ffd3e00f1fc86";
sha256 = "7f6494ccd41603208acdfcb5f9ae5055de5ffb4216b775b5dfeb1814e499a88b";
}
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.2/linux-x86_64/de/thunderbird-78.3.2.tar.bz2";
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.3/linux-x86_64/de/thunderbird-78.3.3.tar.bz2";
locale = "de";
arch = "linux-x86_64";
sha256 = "20fabc41f2375020e00517065ad3316905bb619c727422196d49475a42f151cb";
sha256 = "37b7853bdbde0ee0c16aece73c986ca59f1575e43f0f14358c574c9c01db44f9";
}
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.2/linux-x86_64/dsb/thunderbird-78.3.2.tar.bz2";
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.3/linux-x86_64/dsb/thunderbird-78.3.3.tar.bz2";
locale = "dsb";
arch = "linux-x86_64";
sha256 = "1b0deceff0d884da593e4e6b63cd544ddb680300db7eca1cb33ea556e63942a6";
sha256 = "2c4ff1f46de1cb7efd0543e41a249884e0446833512e68517976b7c6b77bcead";
}
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.2/linux-x86_64/el/thunderbird-78.3.2.tar.bz2";
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.3/linux-x86_64/el/thunderbird-78.3.3.tar.bz2";
locale = "el";
arch = "linux-x86_64";
sha256 = "02d7c36b55d3874b9b97ca70605af2bd665778f63620f70f3e8773c145fc89b1";
sha256 = "23c5e014271a05d5de832568e1231061d9901369605501961cb2a667ec307a96";
}
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.2/linux-x86_64/en-CA/thunderbird-78.3.2.tar.bz2";
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.3/linux-x86_64/en-CA/thunderbird-78.3.3.tar.bz2";
locale = "en-CA";
arch = "linux-x86_64";
sha256 = "5696ae6535e5a7a8502a86a7834da57ba63b6b2b46e17b46b50535165c1cf9e7";
sha256 = "a7e202a4b935d2e06131e436d140a42d5e50e4459cb18ae84624de2bd91df8a2";
}
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.2/linux-x86_64/en-GB/thunderbird-78.3.2.tar.bz2";
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.3/linux-x86_64/en-GB/thunderbird-78.3.3.tar.bz2";
locale = "en-GB";
arch = "linux-x86_64";
sha256 = "6e4c70de2f11a97487e0312af883bd966e3ef937867ebe11e0fd97fab70bb0ac";
sha256 = "8f4c43a542d7d7b0bb795b30601dadc77018a5e0e98086ec6761a8fe6414144b";
}
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.2/linux-x86_64/en-US/thunderbird-78.3.2.tar.bz2";
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.3/linux-x86_64/en-US/thunderbird-78.3.3.tar.bz2";
locale = "en-US";
arch = "linux-x86_64";
sha256 = "09e237e75ea4b7c66f249344bd4774c69b9e271176280be3efd8b037699eaa3f";
sha256 = "55e3e805837f05323f505676d7247a39fa09a1c9a0a613baa185d33ecea6c3b8";
}
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.2/linux-x86_64/es-AR/thunderbird-78.3.2.tar.bz2";
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.3/linux-x86_64/es-AR/thunderbird-78.3.3.tar.bz2";
locale = "es-AR";
arch = "linux-x86_64";
sha256 = "1df4ab6d9ef48a36b90e2f37ca872a772d0e445a9c4d1428a65b3484facf142c";
sha256 = "51d5614601acedf0591cee675ffd06df80bb9bb2a8da3f4bfd149e559a1ee8e6";
}
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.2/linux-x86_64/es-ES/thunderbird-78.3.2.tar.bz2";
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.3/linux-x86_64/es-ES/thunderbird-78.3.3.tar.bz2";
locale = "es-ES";
arch = "linux-x86_64";
sha256 = "eb4f2ed2a4ceeeb7146f46a5b675949337aa6251b26714d9e7bf21213e4a81c0";
sha256 = "f08e880fcc6fe5207e71e86a41342c337f0bac7d7d443a5adfbeec6cc981a3fe";
}
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.2/linux-x86_64/et/thunderbird-78.3.2.tar.bz2";
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.3/linux-x86_64/et/thunderbird-78.3.3.tar.bz2";
locale = "et";
arch = "linux-x86_64";
sha256 = "1e52313ce19c31c0e8f1015b9bdf4f16ec81235673ce1305b1754dccc9d549c2";
sha256 = "28ec37c6fb53376c78bfaa5439700641775478938c038001189a083303db1324";
}
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.2/linux-x86_64/eu/thunderbird-78.3.2.tar.bz2";
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.3/linux-x86_64/eu/thunderbird-78.3.3.tar.bz2";
locale = "eu";
arch = "linux-x86_64";
sha256 = "452c7663e25c88a19232afbadf5c04b2d9bde6095259b4b6e23961d134682d63";
sha256 = "9b8e992641b174f3cc544ae9b59f661613b42b45c97502711415a628b7d4afb2";
}
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.2/linux-x86_64/fa/thunderbird-78.3.2.tar.bz2";
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.3/linux-x86_64/fa/thunderbird-78.3.3.tar.bz2";
locale = "fa";
arch = "linux-x86_64";
sha256 = "afd84bbe0728f69ded3ea9babf15d9fcc7cd52c242c2ac37dfcac14d0a700a45";
sha256 = "c9d92164ae10fe4897c4f442ddce2445dd503663a8bca340e493fd117da34304";
}
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.2/linux-x86_64/fi/thunderbird-78.3.2.tar.bz2";
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.3/linux-x86_64/fi/thunderbird-78.3.3.tar.bz2";
locale = "fi";
arch = "linux-x86_64";
sha256 = "fc2042612a6d4366ae5e7d86dd254a16865ec4fea4c47d242c9d170de738fc00";
sha256 = "e7b4565ba860a247deeaf0d02e2fed669db8289feb3ca3b163f1ffbe85ae67ed";
}
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.2/linux-x86_64/fr/thunderbird-78.3.2.tar.bz2";
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.3/linux-x86_64/fr/thunderbird-78.3.3.tar.bz2";
locale = "fr";
arch = "linux-x86_64";
sha256 = "55acb0633729a54eb594489b5e586626220abd51b36a18d57b78ea5cf44c74f9";
sha256 = "e1a886d5fcab0754587e789cf63d1ffeff795fdad9358f7b22d43864707dc964";
}
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.2/linux-x86_64/fy-NL/thunderbird-78.3.2.tar.bz2";
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.3/linux-x86_64/fy-NL/thunderbird-78.3.3.tar.bz2";
locale = "fy-NL";
arch = "linux-x86_64";
sha256 = "5789bc3439d9cad9b6a19b341ed20ef1addf0fd5e6e2b7fd811262a6b03efb42";
sha256 = "e567acb14c4a8c5b78122dcab5f43754557185008482fa588e392c3328dc7485";
}
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.2/linux-x86_64/ga-IE/thunderbird-78.3.2.tar.bz2";
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.3/linux-x86_64/ga-IE/thunderbird-78.3.3.tar.bz2";
locale = "ga-IE";
arch = "linux-x86_64";
sha256 = "25628528647077b5d002a362588f2cc51102a9e56cb69e1adab3ce6248934d50";
sha256 = "92c74b4273c8d6de3867d8469e5e6dedb95e4d83759b47d1e2d09e3036b3ba45";
}
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.2/linux-x86_64/gd/thunderbird-78.3.2.tar.bz2";
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.3/linux-x86_64/gd/thunderbird-78.3.3.tar.bz2";
locale = "gd";
arch = "linux-x86_64";
sha256 = "f7a3d9ee0b0e7eb879ab213d2d607b4030a28e6f8c9fa8b9fa344dd800280873";
sha256 = "ccbc85607347ea85fe115cea8733201583525ab07da8048cb4a7d86a011b6775";
}
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.2/linux-x86_64/gl/thunderbird-78.3.2.tar.bz2";
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.3/linux-x86_64/gl/thunderbird-78.3.3.tar.bz2";
locale = "gl";
arch = "linux-x86_64";
sha256 = "81f43c7f99cc40d14292cf6bd2011067a626651018d1db9d8565171f8c1d3e9c";
sha256 = "cae949d4530db73b874d867a002ea47029b84e6e1030da86f331c3975e14b111";
}
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.2/linux-x86_64/he/thunderbird-78.3.2.tar.bz2";
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.3/linux-x86_64/he/thunderbird-78.3.3.tar.bz2";
locale = "he";
arch = "linux-x86_64";
sha256 = "4ba5ab71163107ab78a3b2a54d3069ef055cc052e64b253d12e8bdad1fc2b807";
sha256 = "fe81e4be62635672dc042e4efec8ff32110be136038f8378bacd56580f60ab0d";
}
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.2/linux-x86_64/hr/thunderbird-78.3.2.tar.bz2";
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.3/linux-x86_64/hr/thunderbird-78.3.3.tar.bz2";
locale = "hr";
arch = "linux-x86_64";
sha256 = "3bc0688dc2e7bffff8f57bd93dc6aa5442809372bfe76866ee73b0a255940d52";
sha256 = "0be0751d775a2f470dab7a86f94ab09504005c66a1bd9a82c3ee1fc235281047";
}
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.2/linux-x86_64/hsb/thunderbird-78.3.2.tar.bz2";
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.3/linux-x86_64/hsb/thunderbird-78.3.3.tar.bz2";
locale = "hsb";
arch = "linux-x86_64";
sha256 = "d72f79876011e5b9b51aa5a6f13fcf94953aa2e88c78b622882ea7e488aebf2a";
sha256 = "a60f0858f4189c4e9ce4d739c6e2def435c3192a2d5a289feb82b97636b04f87";
}
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.2/linux-x86_64/hu/thunderbird-78.3.2.tar.bz2";
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.3/linux-x86_64/hu/thunderbird-78.3.3.tar.bz2";
locale = "hu";
arch = "linux-x86_64";
sha256 = "758a16aa0d6e8531c29f32735958984af64861aba71b7bf4b1abd0f9317cd9e7";
sha256 = "f9aa36e5d171deaacef4c222f60de72408812fa84266115bcedcad478b9d382c";
}
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.2/linux-x86_64/hy-AM/thunderbird-78.3.2.tar.bz2";
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.3/linux-x86_64/hy-AM/thunderbird-78.3.3.tar.bz2";
locale = "hy-AM";
arch = "linux-x86_64";
sha256 = "3c322f520d8e3aecfe0380235034322e3cd5b507bcec1b637ea5257dccc5675c";
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sha256 = "3a827222a53dd5ce567a485687084aa48f484e9ac4aa347cc71c8fa53fcf90c2";
}
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.2/linux-i686/nb-NO/thunderbird-78.3.2.tar.bz2";
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.3/linux-i686/nb-NO/thunderbird-78.3.3.tar.bz2";
locale = "nb-NO";
arch = "linux-i686";
sha256 = "58199dcfbebbdcc122308140c128d56c6ca464e477c76c8ec39d22c6c444b6a9";
sha256 = "5258e957474ecfc63dac04d1dcc43781c09fa6b358fabf1ea90808097d878670";
}
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.2/linux-i686/nl/thunderbird-78.3.2.tar.bz2";
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.3/linux-i686/nl/thunderbird-78.3.3.tar.bz2";
locale = "nl";
arch = "linux-i686";
sha256 = "c62325f5e2718f9e28554a7df99c3c68376d9c8208a62345a913e176e0388510";
sha256 = "30450f1d2c53679d8aed8ee3bd986eadf31969e9f3ef5bf2ebf8bdaf5987220a";
}
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.2/linux-i686/nn-NO/thunderbird-78.3.2.tar.bz2";
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.3/linux-i686/nn-NO/thunderbird-78.3.3.tar.bz2";
locale = "nn-NO";
arch = "linux-i686";
sha256 = "f560d924bf9d267f231ff0869c0770d2216690f8944df79b417f1d53dc814bd5";
sha256 = "48e3bb7d281359537e1fa781431c82130a5ca66bebfa6401598054365055bb8a";
}
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.2/linux-i686/pa-IN/thunderbird-78.3.2.tar.bz2";
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.3/linux-i686/pa-IN/thunderbird-78.3.3.tar.bz2";
locale = "pa-IN";
arch = "linux-i686";
sha256 = "bbb256675969e68bfd0595dbe6a1c3096622f8fb818d08759e7c3d1648745b32";
sha256 = "b2a215dfc8cb5026c7696ca7e2ad99d49bb5bcc24bb4b54627cd6e989b7cf420";
}
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.2/linux-i686/pl/thunderbird-78.3.2.tar.bz2";
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.3/linux-i686/pl/thunderbird-78.3.3.tar.bz2";
locale = "pl";
arch = "linux-i686";
sha256 = "a6fbe42f3a0be3e4e3df2156d668e1ac83c2e58abdf55ddce1469a90e2cec9dc";
sha256 = "74d4c9177cededc4db647df7d10e9e80b7e0312d75742dd547f332ec3c4f4d83";
}
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.2/linux-i686/pt-BR/thunderbird-78.3.2.tar.bz2";
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.3/linux-i686/pt-BR/thunderbird-78.3.3.tar.bz2";
locale = "pt-BR";
arch = "linux-i686";
sha256 = "bbf82582f1c9b214e4f47bb1f4cc03a0df32d779a2d2f752bef3329540c321a0";
sha256 = "3468210c606502a26238b0a9f48e9ab68e37848d3e76a43115cf1dcabb3c7e92";
}
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.2/linux-i686/pt-PT/thunderbird-78.3.2.tar.bz2";
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.3/linux-i686/pt-PT/thunderbird-78.3.3.tar.bz2";
locale = "pt-PT";
arch = "linux-i686";
sha256 = "3a5b00fd0a85cd5f613a8a98d8f41e8419335a9012e9f933e2adc7d2431e584a";
sha256 = "6343712151c93614da79f2de7adc0775e9f97958a8692bbf9fff6e0138f9ead6";
}
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.2/linux-i686/rm/thunderbird-78.3.2.tar.bz2";
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.3/linux-i686/rm/thunderbird-78.3.3.tar.bz2";
locale = "rm";
arch = "linux-i686";
sha256 = "3f3ff94e6cffa497146590b7efa57e6051ff8b815fac50e3339eff1c7ec51e8b";
sha256 = "fb8c3e00b95f40f59cd32d5dc7799872d787aa7c8e25b86c8d8a9d24f17ac282";
}
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.2/linux-i686/ro/thunderbird-78.3.2.tar.bz2";
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.3/linux-i686/ro/thunderbird-78.3.3.tar.bz2";
locale = "ro";
arch = "linux-i686";
sha256 = "a9968a9b3e0c1323f9d08dc7efe31d77f0f5dacceceba1f9cdb737340b4a74c1";
sha256 = "f55814c30f01d676240da7f5193a518aaf3b968500387ed4d0a6e2730ef6f404";
}
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.2/linux-i686/ru/thunderbird-78.3.2.tar.bz2";
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.3/linux-i686/ru/thunderbird-78.3.3.tar.bz2";
locale = "ru";
arch = "linux-i686";
sha256 = "e02d0d2b19787892b80ee987665e59129fd84d3f9c4e3cd139589cb41d25ae7a";
sha256 = "9944e8969685e16d858d2935ab5466a034f11bcae140c5e749d3255e94f203e4";
}
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.2/linux-i686/si/thunderbird-78.3.2.tar.bz2";
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.3/linux-i686/si/thunderbird-78.3.3.tar.bz2";
locale = "si";
arch = "linux-i686";
sha256 = "bfd849787426abcdfdfc97933e4e9bb4360a96d1912d6c5f7f1ac6cd4d9370df";
sha256 = "97f0558bdc3f22474632f2bd4ba904ea4c460e993c78d347746613e889365b76";
}
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.2/linux-i686/sk/thunderbird-78.3.2.tar.bz2";
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.3/linux-i686/sk/thunderbird-78.3.3.tar.bz2";
locale = "sk";
arch = "linux-i686";
sha256 = "855560f2af08f0ee27c658cbf755973b7333604c731d9442418e75fc1bf50fa2";
sha256 = "801d923a1359ae95f3fe242765e4e13cf8ec24c6643eee16fb3c528207d234bb";
}
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.2/linux-i686/sl/thunderbird-78.3.2.tar.bz2";
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.3/linux-i686/sl/thunderbird-78.3.3.tar.bz2";
locale = "sl";
arch = "linux-i686";
sha256 = "6f40769e00da9228e806304edc63e5730126937dbec77bc91d92e27ff28c0c15";
sha256 = "5182e97f255533a625f21f5add3207150eabb19fb3d42258b82a1a7c5c52558f";
}
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.2/linux-i686/sq/thunderbird-78.3.2.tar.bz2";
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.3/linux-i686/sq/thunderbird-78.3.3.tar.bz2";
locale = "sq";
arch = "linux-i686";
sha256 = "067738a24e3f541d8e8c4515570ea61c5f17e95bcc4f61aff29db7e43f916106";
sha256 = "1f5f5bf222194e9f8a5bf8c022ff9f19c6b6039243e2943a121d0b9aab1d6fe1";
}
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.2/linux-i686/sr/thunderbird-78.3.2.tar.bz2";
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.3/linux-i686/sr/thunderbird-78.3.3.tar.bz2";
locale = "sr";
arch = "linux-i686";
sha256 = "f067575a282cf0e59e87b9b6eed247d697249e181febe1713bde8555adc17cbd";
sha256 = "96ad96eaeb4ae9ba928253657e628d2209b0db069dac793df65baf61c4e37d8d";
}
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.2/linux-i686/sv-SE/thunderbird-78.3.2.tar.bz2";
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.3/linux-i686/sv-SE/thunderbird-78.3.3.tar.bz2";
locale = "sv-SE";
arch = "linux-i686";
sha256 = "c7c80cea8b8196da0bd13de4320715f14cce50a1bb9d5a529dc6c1ad48ec9535";
sha256 = "3d6a37dd60452d33ccf92533b759bf90133f4f422f4ca44484a209ae268edfd4";
}
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.2/linux-i686/th/thunderbird-78.3.2.tar.bz2";
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.3/linux-i686/th/thunderbird-78.3.3.tar.bz2";
locale = "th";
arch = "linux-i686";
sha256 = "667fc7175767cd7383cfe29e0774d5b302cead6670edc28032aadf1404d4ffbe";
sha256 = "239807db003aa49f4b7aba49a69d16ad052ff98e7fb4853b4c9792cfde3cac75";
}
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.2/linux-i686/tr/thunderbird-78.3.2.tar.bz2";
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.3/linux-i686/tr/thunderbird-78.3.3.tar.bz2";
locale = "tr";
arch = "linux-i686";
sha256 = "b41831259a05028054c80378f30cd3edd8b1cee012d7045b34d2a62f38ea4980";
sha256 = "2f63ca26d2d5e64d33c8825668bb86c3fb66c2c4eedf64ce1d9f8fc09cbb74c9";
}
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.2/linux-i686/uk/thunderbird-78.3.2.tar.bz2";
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.3/linux-i686/uk/thunderbird-78.3.3.tar.bz2";
locale = "uk";
arch = "linux-i686";
sha256 = "c7ec76e5052c7a0b91a37bfa889a23c43503a5da5d672af2faf529e3bb626adf";
sha256 = "a758f2ac93b8b863a6b88f533717314fc98fa8242491580da6fc909e336d10bd";
}
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.2/linux-i686/uz/thunderbird-78.3.2.tar.bz2";
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.3/linux-i686/uz/thunderbird-78.3.3.tar.bz2";
locale = "uz";
arch = "linux-i686";
sha256 = "c6b95124196c7865cc2d4f04a32e3bccad4a6d57ec8c9b4a4477f6cef2cc8d69";
sha256 = "816211a8990820627a1e661ad7cfd4a35ed19d1e0a467e4f062cb9df1e251621";
}
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.2/linux-i686/vi/thunderbird-78.3.2.tar.bz2";
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.3/linux-i686/vi/thunderbird-78.3.3.tar.bz2";
locale = "vi";
arch = "linux-i686";
sha256 = "e20fce086298932fa45bf8627a2306e160395e9302b7c5b48092a8dbd2f78f2f";
sha256 = "bd73132366caf23b21bfebf6fa66c93f9a5c66ef10ae663737babe71f2183952";
}
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.2/linux-i686/zh-CN/thunderbird-78.3.2.tar.bz2";
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.3/linux-i686/zh-CN/thunderbird-78.3.3.tar.bz2";
locale = "zh-CN";
arch = "linux-i686";
sha256 = "b5a9e98af41d24d12ab111356c035769c71ddd3d9a79a959584d4ae11ca8f706";
sha256 = "b7e1fdca9a331b00ca8a0c089f840253065c8ecd5b3c670386ae9a91a0ed499c";
}
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.2/linux-i686/zh-TW/thunderbird-78.3.2.tar.bz2";
{ url = "http://archive.mozilla.org/pub/thunderbird/releases/78.3.3/linux-i686/zh-TW/thunderbird-78.3.3.tar.bz2";
locale = "zh-TW";
arch = "linux-i686";
sha256 = "9978aa31d4ef744921e43a116cdc2deead358f7db368ee64e90d37119819a4fc";
sha256 = "6923adebb0c8022de19df9c1fca174a94e942b2d14da4bedd9d812f160b6c1aa";
}
];
}

4
third_party/nixpkgs/pkgs/applications/networking/mailreaders/thunderbird/default.nix vendored
View file

@ -70,13 +70,13 @@ assert waylandSupport -> gtk3Support == true;
stdenv.mkDerivation rec {
pname = "thunderbird";
version = "78.3.2";
version = "78.3.3";
src = fetchurl {
url =
"mirror://mozilla/thunderbird/releases/${version}/source/thunderbird-${version}.source.tar.xz";
sha512 =
"3c5b9400k3nrlabr2cvm5s3nz4ngy9qnz0j44mczh67v5xsmxi1hks8dx75s8sbbhnzmg0id4vlxfwd7i259p2xc039nkzkahmfn2wc";
"0w5njyhxm7lmrygj4q3sh1hddgr389j4cxpjfdx856819vb8ldgv1qcnfd8has2f29wqymzbgx9i6sjb4hp6k44kbxdmwp0zmi5rwpg";
};
nativeBuildInputs = [

1373
third_party/nixpkgs/pkgs/development/compilers/elm/packages/node-packages.nix generated vendored
View file

File diff suppressed because it is too large Load diff

6
third_party/nixpkgs/pkgs/development/compilers/picat/default.nix vendored
View file

@ -2,11 +2,11 @@
stdenv.mkDerivation {
pname = "picat";
version = "3.0";
version = "3.0p2";
src = fetchurl {
url = "http://picat-lang.org/download/picat30_src.tar.gz";
sha256 = "0ivqp4ifknc019rb975vx5j3rmr69x2f3ig7ybb38wm5zx5mljgg";
url = "http://picat-lang.org/download/picat30_2_src.tar.gz";
sha256 = "0sn4fqj2ryalcndx1df5kx5rzb4pfcrza5ljlg9dkfbqv02xgxkd";
};
buildInputs = [ zlib ];

6
third_party/nixpkgs/pkgs/development/compilers/yosys/default.nix vendored
View file

@ -16,13 +16,13 @@
stdenv.mkDerivation rec {
pname = "yosys";
version = "2020.08.22";
version = "2020.10.20";
src = fetchFromGitHub {
owner = "YosysHQ";
repo = "yosys";
rev = "12132b6850747aec99715fdfa3184fe3ebefa015";
sha256 = "1v6x1y2f3r8vi7pnkgx374rrv02xgmg9yg23f61n7d1v2rd6y5cc";
rev = "06347b119b08257eff37cdd10ed802e794c1a3cf";
sha256 = "07058r8095192gwkiy2yyvj9vxv09fcw9bqi2b39wn85lh5kx2k2";
};
enableParallelBuilding = true;

11
third_party/nixpkgs/pkgs/development/libraries/gtk/2.x.nix vendored
View file

@ -12,11 +12,18 @@ assert cupsSupport -> cups != null;
with stdenv.lib;
let
pname = "gtk+";
version = "2.24.32"; # remove passthru on next update
in
stdenv.mkDerivation rec {
name = "gtk+-2.24.32";
name = "${pname}-${version}";
# passthru to prevent rebuild but allow pname and version
passthru = { inherit pname version; };
src = fetchurl {
url = "mirror://gnome/sources/gtk+/2.24/${name}.tar.xz";
url = "mirror://gnome/sources/gtk+/2.24/${pname}-${version}.tar.xz";
sha256 = "b6c8a93ddda5eabe3bfee1eb39636c9a03d2a56c7b62828b359bf197943c582e";
};

4
third_party/nixpkgs/pkgs/development/libraries/libamqpcpp/default.nix vendored
View file

@ -2,13 +2,13 @@
stdenv.mkDerivation rec {
pname = "libamqpcpp";
version = "4.1.7";
version = "4.2.1";
src = fetchFromGitHub {
owner = "CopernicaMarketingSoftware";
repo = "AMQP-CPP";
rev = "v${version}";
sha256 = "16xgl0yqzqkqfrz7x9rbbv8rj5rg5jlz4a7apj9igqb58q0w362x";
sha256 = "0993vlvpa3vwg7qb5vl3jcnqwb8dqqfrxg4gg8mz7icnhx57kj34";
};
buildInputs = [ openssl ];

8
third_party/nixpkgs/pkgs/development/libraries/relibc/default.nix vendored
View file

@ -7,10 +7,10 @@ let
];
bootstrapCrossRust = stdenvNoCC.mkDerivation {
name = "binary-redox-rust";
src = fetchTarball {
name = "redox-rust-toolchain-bin.tar.gz";
url = "https://www.dropbox.com/s/33r92en0t47l1ei/redox-rust-toolchain-bin.tar.gz?dl=1";
src = buildPackages.fetchzip {
name = "redox-rust-toolchain.tar.gz";
url = "https://www.dropbox.com/s/qt7as0j7cwnin8z/redox-rust-toolchain.tar.gz?dl=1";
sha256 = "1g17qp2q6b88p04yclkw6amm374pqlakrmw9kd86vw8z4g70jkxm";
};

14
third_party/nixpkgs/pkgs/development/ocaml-modules/janestreet/ppx-core.nix vendored
View file

@ -1,14 +0,0 @@
{stdenv, buildOcamlJane, ppx_tools}:
buildOcamlJane {
name = "ppx_core";
hash = "0df7vyai488lfkyh8szw2hvn22jsyrkfvq1b91j1s0g0y27nnfax";
propagatedBuildInputs =
[ ppx_tools ];
meta = with stdenv.lib; {
description = "PPX standard library";
maintainers = [ maintainers.maurer ];
license = licenses.asl20;
};
}

15
third_party/nixpkgs/pkgs/development/ocaml-modules/janestreet/ppx-driver.nix vendored
View file

@ -1,15 +0,0 @@
{stdenv, buildOcamlJane,
ppx_core, ppx_optcomp}:
buildOcamlJane {
name = "ppx_driver";
hash = "19cpfdn1n36vl5l9d6h7c61ffn0wmiipprn5by0354i5aywj8gpn";
propagatedBuildInputs =
[ ppx_core ppx_optcomp ];
meta = with stdenv.lib; {
description = "A driver is an executable created from a set of OCaml AST transformers linked together with a command line frontend";
maintainers = [ maintainers.maurer ];
license = licenses.asl20;
};
}

14
third_party/nixpkgs/pkgs/development/ocaml-modules/janestreet/ppx-fail.nix vendored
View file

@ -1,14 +0,0 @@
{stdenv, buildOcamlJane,
ppx_core, ppx_driver, ppx_here, ppx_tools}:
buildOcamlJane {
name = "ppx_fail";
hash = "1ms5axpc0zg469zj4799nz3wwxi6rmmyvqj52dy03crmpj71s18l";
propagatedBuildInputs = [ ppx_core ppx_driver ppx_here ppx_tools ];
meta = with stdenv.lib; {
description = "Syntax extension that makes failwith include a position";
maintainers = [ maintainers.maurer ];
license = licenses.asl20;
};
}

15
third_party/nixpkgs/pkgs/development/ocaml-modules/janestreet/ppx-type-conv.nix vendored
View file

@ -1,15 +0,0 @@
{stdenv, buildOcamlJane,
ppx_core, ppx_deriving, ppx_driver, ppx_tools}:
buildOcamlJane {
name = "ppx_type_conv";
hash = "0gv0mqwn97dwrfm6rj442565y8dz7kiq8s8vadnhywrl7j4znqyq";
propagatedBuildInputs =
[ ppx_core ppx_deriving ppx_driver ppx_tools ];
meta = with stdenv.lib; {
description = "The type_conv library factors out functionality needed by different preprocessors that generate code from type specifications";
maintainers = [ maintainers.maurer ];
license = licenses.asl20;
};
}

4
third_party/nixpkgs/pkgs/development/python-modules/aws-lambda-builders/default.nix vendored
View file

@ -12,14 +12,14 @@
buildPythonPackage rec {
pname = "aws-lambda-builders";
version = "0.9.0";
version = "1.1.0";
# No tests available in PyPI tarball
src = fetchFromGitHub {
owner = "awslabs";
repo = "aws-lambda-builders";
rev = "v${version}";
sha256 = "0cgb0hwf4xg5dmm32wwlxqy7a77jw6gpnj7v8rq5948hsy2sfrcp";
sha256 = "1r4939m5k1nj6l9bv972z4fkmkl0z5f5r29bq7588yk113kkqr0c";
};
# Package is not compatible with Python 3.5

4
third_party/nixpkgs/pkgs/development/python-modules/aws-sam-translator/default.nix vendored
View file

@ -10,11 +10,11 @@
buildPythonPackage rec {
pname = "aws-sam-translator";
version = "1.26.0";
version = "1.27.0";
src = fetchPypi {
inherit pname version;
sha256 = "1a3fd8e48a745967e8457b9cefdc3ad0f139ac4a25af4db9c13a9e1c19ea6910";
sha256 = "0m24cdiry8p74s5ysyriy6wks4ic8782sf21q4yvlwfn9hpi4n1j";
};
# Tests are not included in the PyPI package

63
third_party/nixpkgs/pkgs/development/python-modules/pysam/default.nix vendored
View file

@ -6,6 +6,7 @@
, curl
, cython
, htslib
, libdeflate
, lzma
, pytest
, samtools
@ -27,22 +28,72 @@ buildPythonPackage rec {
};
nativeBuildInputs = [ samtools ];
buildInputs = [ bzip2 curl cython lzma zlib ];
buildInputs = [
bzip2
curl
cython
libdeflate
lzma
zlib
];
checkInputs = [ pytest bcftools htslib ];
checkPhase = "py.test";
# Use nixpkgs' htslib instead of the bundled one
# See https://pysam.readthedocs.io/en/latest/installation.html#external
# NOTE that htslib should be version compatible with pysam
preBuild = ''
export HTSLIB_MODE=shared
export HTSLIB_LIBRARY_DIR=${htslib}/lib
export HTSLIB_INCLUDE_DIR=${htslib}/include
'';
# tests require samtools<=1.9
doCheck = false;
preCheck = ''
checkInputs = [
pytest
bcftools
htslib
];
# See https://github.com/NixOS/nixpkgs/pull/100823 for why we aren't using
# disabledTests and pytestFlagsArray through pytestCheckHook
checkPhase = ''
# Needed to avoid /homeless-shelter error
export HOME=$(mktemp -d)
# To avoid API incompatibilities, these should ideally show the same version
echo "> samtools --version"
samtools --version
echo "> htsfile --version"
htsfile --version
echo "> bcftools --version"
bcftools --version
# Create auxiliary test data
make -C tests/pysam_data
make -C tests/cbcf_data
# Delete pysam folder in current directory to avoid importing it during testing
rm -rf pysam
# Deselect tests that are known to fail due to upstream issues
# See https://github.com/pysam-developers/pysam/issues/961
py.test \
--deselect tests/AlignmentFileHeader_test.py::TestHeaderBAM::test_dictionary_access_works \
--deselect tests/AlignmentFileHeader_test.py::TestHeaderBAM::test_header_content_is_as_expected \
--deselect tests/AlignmentFileHeader_test.py::TestHeaderCRAM::test_dictionary_access_works \
--deselect tests/AlignmentFileHeader_test.py::TestHeaderCRAM::test_header_content_is_as_expected \
--deselect tests/AlignmentFile_test.py::TestIO::testBAM2SAM \
--deselect tests/AlignmentFile_test.py::TestIO::testSAM2BAM \
--deselect tests/AlignmentFile_test.py::TestIO::testWriteUncompressedBAMFile \
--deselect tests/AlignmentFile_test.py::TestDeNovoConstruction::testBAMWholeFile \
--deselect tests/AlignmentFile_test.py::TestEmptyHeader::testEmptyHeader \
--deselect tests/AlignmentFile_test.py::TestHeaderWithProgramOptions::testHeader \
--deselect tests/StreamFiledescriptors_test.py::StreamTest::test_text_processing \
tests/
'';
pythonImportsCheck = [
"pysam"
"pysam.bcftools"
"pysam.libchtslib"
"pysam.libcutils"
"pysam.libcvcf"
];

389
third_party/nixpkgs/pkgs/development/r-modules/bioc-annotation-packages.nix generated vendored
View file

@ -4,10 +4,10 @@
# Rscript generate-r-packages.R bioc-annotation >new && mv new bioc-annotation-packages.nix
{ self, derive }:
let derive2 = derive { biocVersion = "3.8"; };
let derive2 = derive { biocVersion = "3.11"; };
in with self; {
AHCytoBands = derive2 { name="AHCytoBands"; version="0.99.0"; sha256="0g92nz33rx14zl5can7s701bipdgz7rxqygvvc22c4a0qj52ijnq"; depends=[]; };
AHEnsDbs = derive2 { name="AHEnsDbs"; version="1.0.8"; sha256="1v1177l4y0l546mzp8ybhvhnjwrsck5bkic8w6n6n2xq07d6aahz"; depends=[AnnotationHubData ensembldb]; };
AHEnsDbs = derive2 { name="AHEnsDbs"; version="1.0.14"; sha256="0fb94bxk6ggx09a0icraaxfzncvvgxk223146b17lbxsyl6i02z8"; depends=[AnnotationHubData ensembldb]; };
BSgenome_Alyrata_JGI_v1 = derive2 { name="BSgenome.Alyrata.JGI.v1"; version="1.0.0"; sha256="06549kkzy36n378zb61lrf9zardncp7i20r73rmmiq1pnfjp3gww"; depends=[BSgenome]; };
BSgenome_Amellifera_BeeBase_assembly4 = derive2 { name="BSgenome.Amellifera.BeeBase.assembly4"; version="1.4.0"; sha256="02zs16q441zcbfp7xvv1gny5nn02ivfr8md1wh5s5rpnj6sdl6kj"; depends=[BSgenome]; };
BSgenome_Amellifera_UCSC_apiMel2 = derive2 { name="BSgenome.Amellifera.UCSC.apiMel2"; version="1.4.0"; sha256="1967w7aly7qydykk7rar712kvgsav3zjr4kirybkj17nwiynd74g"; depends=[BSgenome]; };
@ -22,6 +22,7 @@ in with self; {
BSgenome_Btaurus_UCSC_bosTau6 = derive2 { name="BSgenome.Btaurus.UCSC.bosTau6"; version="1.4.0"; sha256="0waaf9wfmdl5jbi3la64vsiqb83lyw9fqg3sn90bf1q7k3k617p3"; depends=[BSgenome]; };
BSgenome_Btaurus_UCSC_bosTau6_masked = derive2 { name="BSgenome.Btaurus.UCSC.bosTau6.masked"; version="1.3.99"; sha256="07isv0lcvlsl0aha1p474l0pps0j7bsh455m33vfxwahivqsfy27"; depends=[BSgenome BSgenome_Btaurus_UCSC_bosTau6]; };
BSgenome_Btaurus_UCSC_bosTau8 = derive2 { name="BSgenome.Btaurus.UCSC.bosTau8"; version="1.4.2"; sha256="16wjy1aw9nvx03r7w8yh5w7sw3pn8i9nczd0n0728l6nnyqxlsz6"; depends=[BSgenome]; };
BSgenome_Btaurus_UCSC_bosTau9 = derive2 { name="BSgenome.Btaurus.UCSC.bosTau9"; version="1.4.2"; sha256="0vx9z101faybqqdqfk306m7m3j490svmx7bn7knh5if66g0mzi7g"; depends=[BSgenome]; };
BSgenome_Carietinum_NCBI_v1 = derive2 { name="BSgenome.Carietinum.NCBI.v1"; version="1.0.0"; sha256="1asyyb1p1bzc7dv9s2igjxrf9f144vvz2xbv9qxg15w9qzzx7r33"; depends=[BSgenome]; };
BSgenome_Celegans_UCSC_ce10 = derive2 { name="BSgenome.Celegans.UCSC.ce10"; version="1.4.0"; sha256="1zaym97jk4npxk14ifvwz2rvhm4zx9xgs33r9vvx9rlynp0gydrk"; depends=[BSgenome]; };
BSgenome_Celegans_UCSC_ce11 = derive2 { name="BSgenome.Celegans.UCSC.ce11"; version="1.4.2"; sha256="0d4bxfglpqiv1f0n6imdgz101g9383hfj3ra91268wryzlm0yk5w"; depends=[BSgenome]; };
@ -31,18 +32,21 @@ in with self; {
BSgenome_Cfamiliaris_UCSC_canFam2_masked = derive2 { name="BSgenome.Cfamiliaris.UCSC.canFam2.masked"; version="1.3.99"; sha256="14108j73z7959d070xiqar5s14pac18cs8a22lcggbmp5x93hmqz"; depends=[BSgenome BSgenome_Cfamiliaris_UCSC_canFam2]; };
BSgenome_Cfamiliaris_UCSC_canFam3 = derive2 { name="BSgenome.Cfamiliaris.UCSC.canFam3"; version="1.4.0"; sha256="1ir092yh1h03ag1lnj2rh5hjp2mqrw7fcyb6mqyjm0h8g1pmpicr"; depends=[BSgenome]; };
BSgenome_Cfamiliaris_UCSC_canFam3_masked = derive2 { name="BSgenome.Cfamiliaris.UCSC.canFam3.masked"; version="1.3.99"; sha256="07y28g6b4sbp38yg5rwldda7s1cwcpil6rzsb4csskvs0xi5286l"; depends=[BSgenome BSgenome_Cfamiliaris_UCSC_canFam3]; };
BSgenome_Cjacchus_UCSC_calJac3 = derive2 { name="BSgenome.Cjacchus.UCSC.calJac3"; version="1.4.2"; sha256="1s1srg6lr3dndbpv83bqlxz5lhyhxh431yrd919yl4fwmr5rvx0z"; depends=[BSgenome]; };
BSgenome_Dmelanogaster_UCSC_dm2 = derive2 { name="BSgenome.Dmelanogaster.UCSC.dm2"; version="1.4.0"; sha256="1vnqbm1123zmpn1iwyygr1p4js0j6vifyz7iwzgkiw543yb1mwnl"; depends=[BSgenome]; };
BSgenome_Dmelanogaster_UCSC_dm2_masked = derive2 { name="BSgenome.Dmelanogaster.UCSC.dm2.masked"; version="1.3.99"; sha256="1qclf62c3qrdhnrb6p4rhj7wrarlsbm716d37k0gbdzkfm2vhyr7"; depends=[BSgenome BSgenome_Dmelanogaster_UCSC_dm2]; };
BSgenome_Dmelanogaster_UCSC_dm3 = derive2 { name="BSgenome.Dmelanogaster.UCSC.dm3"; version="1.4.0"; sha256="19bm3lkhhkag3gnwp419211fh0cnr0x6fa0r1lr0ycwrikxdxsv8"; depends=[BSgenome]; };
BSgenome_Dmelanogaster_UCSC_dm3_masked = derive2 { name="BSgenome.Dmelanogaster.UCSC.dm3.masked"; version="1.3.99"; sha256="1756csb09f1br9rj1l3f08qyh4hlymdbd0cfn8x3fq39dn45m5ap"; depends=[BSgenome BSgenome_Dmelanogaster_UCSC_dm3]; };
BSgenome_Dmelanogaster_UCSC_dm6 = derive2 { name="BSgenome.Dmelanogaster.UCSC.dm6"; version="1.4.1"; sha256="1bhj0rdgf7lspw4xby9y9mf7v7jxxz8001bc8vw8kf04rjsx6060"; depends=[BSgenome]; };
BSgenome_Drerio_UCSC_danRer10 = derive2 { name="BSgenome.Drerio.UCSC.danRer10"; version="1.4.2"; sha256="1grlxihdx65fwgb9gbp1jibbqan9a5667w4jgswhg0qsia608lzs"; depends=[BSgenome]; };
BSgenome_Drerio_UCSC_danRer11 = derive2 { name="BSgenome.Drerio.UCSC.danRer11"; version="1.4.2"; sha256="08a928mqzv2jxngjcs4yr6ni1b9z9al6jdngwi438j8hm41cwk4v"; depends=[BSgenome]; };
BSgenome_Drerio_UCSC_danRer5 = derive2 { name="BSgenome.Drerio.UCSC.danRer5"; version="1.4.0"; sha256="1mxmy4ika192xvlrsynyvnb7kvcvbsl89g39q53vrkibhml1q0v5"; depends=[BSgenome]; };
BSgenome_Drerio_UCSC_danRer5_masked = derive2 { name="BSgenome.Drerio.UCSC.danRer5.masked"; version="1.3.99"; sha256="03y08jlknb52x37wg95xaf62n5fbsfpmx57bjyxz2gj0n8zhcdgv"; depends=[BSgenome BSgenome_Drerio_UCSC_danRer5]; };
BSgenome_Drerio_UCSC_danRer6 = derive2 { name="BSgenome.Drerio.UCSC.danRer6"; version="1.4.0"; sha256="0h2chcpdi2vy29fg43r6q37vvb7p4d4cpnszlsmiy7ax358sd5ji"; depends=[BSgenome]; };
BSgenome_Drerio_UCSC_danRer6_masked = derive2 { name="BSgenome.Drerio.UCSC.danRer6.masked"; version="1.3.99"; sha256="175gy5xfp5kzbgmagvls3233i925wppyk9alw75f7jnxfddxvq4k"; depends=[BSgenome BSgenome_Drerio_UCSC_danRer6]; };
BSgenome_Drerio_UCSC_danRer7 = derive2 { name="BSgenome.Drerio.UCSC.danRer7"; version="1.4.0"; sha256="17x3hj08jag05y8q4aziy455jy15dpwkdbh97v3byzcda0kpwbpg"; depends=[BSgenome]; };
BSgenome_Drerio_UCSC_danRer7_masked = derive2 { name="BSgenome.Drerio.UCSC.danRer7.masked"; version="1.3.99"; sha256="153cf2ni7xffi7j7dafg04v6i65gh8d21v7l9szm4c18bywvcn5z"; depends=[BSgenome BSgenome_Drerio_UCSC_danRer7]; };
BSgenome_Dvirilis_Ensembl_dvircaf1 = derive2 { name="BSgenome.Dvirilis.Ensembl.dvircaf1"; version="1.4.3"; sha256="0dwqshpx3mm9k9p3x53hc62czpvqs6v2jw5i977x0y4hfig0zv8m"; depends=[BSgenome]; };
BSgenome_Ecoli_NCBI_20080805 = derive2 { name="BSgenome.Ecoli.NCBI.20080805"; version="1.3.1000"; sha256="1l7mjyys1kaq4mbia9jamyw6sd0ij1wypwxvwy8aksan3gcfnh27"; depends=[BSgenome]; };
BSgenome_Gaculeatus_UCSC_gasAcu1 = derive2 { name="BSgenome.Gaculeatus.UCSC.gasAcu1"; version="1.4.0"; sha256="1w0jpv58kbjvjlsprn5g4nd3g6jhiyw3k6mlfnpnffcbdh27cq0k"; depends=[BSgenome]; };
BSgenome_Gaculeatus_UCSC_gasAcu1_masked = derive2 { name="BSgenome.Gaculeatus.UCSC.gasAcu1.masked"; version="1.3.99"; sha256="13g2xc6v8qlrc0a0zly4ibhzgwg5dsrx1bmw4rrwnkk652alaivx"; depends=[BSgenome BSgenome_Gaculeatus_UCSC_gasAcu1]; };
@ -51,18 +55,21 @@ in with self; {
BSgenome_Ggallus_UCSC_galGal4 = derive2 { name="BSgenome.Ggallus.UCSC.galGal4"; version="1.4.0"; sha256="1qfl046akdf43azigprc13sssgbmxdz9dmlrvy13ag8fgfkjxign"; depends=[BSgenome]; };
BSgenome_Ggallus_UCSC_galGal4_masked = derive2 { name="BSgenome.Ggallus.UCSC.galGal4.masked"; version="1.3.99"; sha256="0fvqimjf1xvgka4nw66nd0rbyb7r93v8cyw33776lhfv68ny058v"; depends=[BSgenome BSgenome_Ggallus_UCSC_galGal4]; };
BSgenome_Ggallus_UCSC_galGal5 = derive2 { name="BSgenome.Ggallus.UCSC.galGal5"; version="1.4.2"; sha256="0gi82xr2b3fn3wi608nmqp3cgjx63rm82wy24p9l0s1qqh2z3jdb"; depends=[BSgenome]; };
BSgenome_Ggallus_UCSC_galGal6 = derive2 { name="BSgenome.Ggallus.UCSC.galGal6"; version="1.4.2"; sha256="00b0awki35xkfjsvv9x1h0sykg5jbf36a37hj4spw028bkg8k7v2"; depends=[BSgenome]; };
BSgenome_Hsapiens_1000genomes_hs37d5 = derive2 { name="BSgenome.Hsapiens.1000genomes.hs37d5"; version="0.99.1"; sha256="1cg0g5fqmsvwyw2p9hp2yy4ilk21jkbbrnpgqvb5c36ihjwvc7sr"; depends=[BSgenome]; };
BSgenome_Hsapiens_NCBI_GRCh38 = derive2 { name="BSgenome.Hsapiens.NCBI.GRCh38"; version="1.3.1000"; sha256="0y75qdq578fh6420vbvsbwmdw8jvr3g06qli2h3vj3pxmjykh9c1"; depends=[BSgenome]; };
BSgenome_Hsapiens_UCSC_hg17 = derive2 { name="BSgenome.Hsapiens.UCSC.hg17"; version="1.3.1000"; sha256="1q8p0zp5xpp22znwnygl3jhc159db4q3kkpj5wfij5a6z19zs1w3"; depends=[BSgenome]; };
BSgenome_Hsapiens_UCSC_hg17_masked = derive2 { name="BSgenome.Hsapiens.UCSC.hg17.masked"; version="1.3.99"; sha256="1pg39kmbmnync0xxdbgsn6gpz78hfbzd7iffidpv8mfk734srwzn"; depends=[BSgenome BSgenome_Hsapiens_UCSC_hg17]; };
BSgenome_Hsapiens_UCSC_hg18 = derive2 { name="BSgenome.Hsapiens.UCSC.hg18"; version="1.3.1000"; sha256="1bd7hn4ksgpyhnbjb9qdqfz5cg6x5lsizbls55v9s9hnvfzq3yi6"; depends=[BSgenome]; };
BSgenome_Hsapiens_UCSC_hg18_masked = derive2 { name="BSgenome.Hsapiens.UCSC.hg18.masked"; version="1.3.99"; sha256="031sr3y95c32igk3lrrsafdm9i1zprjran8gak06arqc0hvzbfk0"; depends=[BSgenome BSgenome_Hsapiens_UCSC_hg18]; };
BSgenome_Hsapiens_UCSC_hg19 = derive2 { name="BSgenome.Hsapiens.UCSC.hg19"; version="1.4.0"; sha256="1y0nqpk8cw5a34sd9hmin3z4v7iqm6hf6l22cl81vlbxqbjibxc8"; depends=[BSgenome]; };
BSgenome_Hsapiens_UCSC_hg19_masked = derive2 { name="BSgenome.Hsapiens.UCSC.hg19.masked"; version="1.3.99"; sha256="0452pyah0kv1vsrsjbrqw4k2rm8lc2vc771dzib45gnnfz86qxrr"; depends=[BSgenome BSgenome_Hsapiens_UCSC_hg19]; };
BSgenome_Hsapiens_UCSC_hg38 = derive2 { name="BSgenome.Hsapiens.UCSC.hg38"; version="1.4.1"; sha256="1ql08pvi4vv0ynvg4qs9kysw1c7s3crkgin6zxvgzqk6fray9mvi"; depends=[BSgenome]; };
BSgenome_Hsapiens_UCSC_hg38_masked = derive2 { name="BSgenome.Hsapiens.UCSC.hg38.masked"; version="1.3.99"; sha256="0plfrhkwgpgp22mj5n704k4ml0vl6hs5wb5vzqnw3vr8qwv0bli1"; depends=[BSgenome BSgenome_Hsapiens_UCSC_hg38]; };
BSgenome_Hsapiens_UCSC_hg19 = derive2 { name="BSgenome.Hsapiens.UCSC.hg19"; version="1.4.3"; sha256="06lx7q7i52lg3vkjkqy492z9ianzgi4nhs9m1jrxjjb4hgbnbyjv"; depends=[BSgenome]; };
BSgenome_Hsapiens_UCSC_hg19_masked = derive2 { name="BSgenome.Hsapiens.UCSC.hg19.masked"; version="1.3.993"; sha256="19533ihgad67bzhavycv6z708012ylz9cw1qdfmk2b7ikf3kiaz9"; depends=[BSgenome BSgenome_Hsapiens_UCSC_hg19]; };
BSgenome_Hsapiens_UCSC_hg38 = derive2 { name="BSgenome.Hsapiens.UCSC.hg38"; version="1.4.3"; sha256="1k4ya5w0bgcqk06518ax803xfanw6x1qjzm6lsd3nplkjg5136f2"; depends=[BSgenome]; };
BSgenome_Hsapiens_UCSC_hg38_masked = derive2 { name="BSgenome.Hsapiens.UCSC.hg38.masked"; version="1.3.993"; sha256="1ncsfa5nialkzllxdj9h5c48hrcv7vrvh7wfnw32y6bqdzg4rwhs"; depends=[BSgenome BSgenome_Hsapiens_UCSC_hg38]; };
BSgenome_Mdomestica_UCSC_monDom5 = derive2 { name="BSgenome.Mdomestica.UCSC.monDom5"; version="1.4.2"; sha256="16kzb66kjpmf9j92pwh98ah5rhrnfyzdpr0rk659zham6dzga9ck"; depends=[BSgenome]; };
BSgenome_Mfascicularis_NCBI_5_0 = derive2 { name="BSgenome.Mfascicularis.NCBI.5.0"; version="1.4.2"; sha256="1lrdj7aibx4i60hpbaqgk3qir9zjs67mxdgp5jmgmw7gf2nwyn3x"; depends=[BSgenome]; };
BSgenome_Mfuro_UCSC_musFur1 = derive2 { name="BSgenome.Mfuro.UCSC.musFur1"; version="1.4.1"; sha256="0c0569a1k36sk0vzf7afhnfm0n2nwcdp3dc88s1hghpg7lwi9g9j"; depends=[BSgenome]; };
BSgenome_Mmulatta_UCSC_rheMac10 = derive2 { name="BSgenome.Mmulatta.UCSC.rheMac10"; version="1.4.2"; sha256="06ja5fn3sgk2lmfwf7m5sqcz0dq732v8y4vhc2cnbbvhpyax0mbd"; depends=[BSgenome]; };
BSgenome_Mmulatta_UCSC_rheMac2 = derive2 { name="BSgenome.Mmulatta.UCSC.rheMac2"; version="1.4.0"; sha256="15vswd1fq7a7g1dkm0wzkmclih8z373nfzjyc3zrn9l0nawdv9jj"; depends=[BSgenome]; };
BSgenome_Mmulatta_UCSC_rheMac2_masked = derive2 { name="BSgenome.Mmulatta.UCSC.rheMac2.masked"; version="1.3.99"; sha256="1j4z4iy13n4qbi9a50qw1hn8z14xz0z8hbiwhy2bb9znykkf4chd"; depends=[BSgenome BSgenome_Mmulatta_UCSC_rheMac2]; };
BSgenome_Mmulatta_UCSC_rheMac3 = derive2 { name="BSgenome.Mmulatta.UCSC.rheMac3"; version="1.4.0"; sha256="0r3v4p567rxcczwqi7zdz7pmdiffgrq83j488libdb4s0hdg5jmi"; depends=[BSgenome]; };
@ -99,8 +106,9 @@ in with self; {
BSgenome_Vvinifera_URGI_IGGP12Xv0 = derive2 { name="BSgenome.Vvinifera.URGI.IGGP12Xv0"; version="0.1"; sha256="1m8mqkiqs7291hccb8pfyf2yxpky45qr6j3d9wkvp9x3ra3h0yxf"; depends=[BSgenome]; };
BSgenome_Vvinifera_URGI_IGGP12Xv2 = derive2 { name="BSgenome.Vvinifera.URGI.IGGP12Xv2"; version="0.1"; sha256="1saavsi75gw33jphhm3qb5psyfrv850ss4cmqr4i7aw1kc0fvs1j"; depends=[BSgenome]; };
BSgenome_Vvinifera_URGI_IGGP8X = derive2 { name="BSgenome.Vvinifera.URGI.IGGP8X"; version="0.1"; sha256="0v0hi2pbbi5ynd92bvbv4bzr7bgv48kvyz62hdv7k9gh7s5pg0id"; depends=[BSgenome]; };
ChemmineDrugs = derive2 { name="ChemmineDrugs"; version="1.0.0"; sha256="0h4jxcb6vkf9ijljas7yvcx6vmrd5rpjgj202cf2jb9hx8h9497i"; depends=[BiocGenerics ChemmineR RSQLite]; };
ChemmineDrugs = derive2 { name="ChemmineDrugs"; version="1.0.2"; sha256="0l47ac6lkycmghra2cbcdcxcv47ari8xg6lxpzilvkf4n6ld6064"; depends=[BiocGenerics ChemmineR RSQLite]; };
DO_db = derive2 { name="DO.db"; version="2.9"; sha256="10bqqa124l61ivzy4mdd3z3ar9a6537qbxw23pc4y9w8a6dwnavn"; depends=[AnnotationDbi]; };
ENCODExplorerData = derive2 { name="ENCODExplorerData"; version="0.99.5"; sha256="00gfm5l8pxrfs4cw4jlw6n0cz5s31isg69k833n89800v26w3kvh"; depends=[data_table jsonlite RCurl]; };
EnsDb_Hsapiens_v75 = derive2 { name="EnsDb.Hsapiens.v75"; version="2.99.0"; sha256="0jx6rf6v0j8yr07q3c1h7s121901dc400nm6xaiv4i7kb5czjn9c"; depends=[ensembldb]; };
EnsDb_Hsapiens_v79 = derive2 { name="EnsDb.Hsapiens.v79"; version="2.99.0"; sha256="0k94iml0417m3k086d0bzd83fndyb2kn7pimsfzcdmafgy6sxwgg"; depends=[ensembldb]; };
EnsDb_Hsapiens_v86 = derive2 { name="EnsDb.Hsapiens.v86"; version="2.99.0"; sha256="1gp7xrzddpvmh2vrcp571wyy00skxgxfl39ksj4h0hm1qay0fb2m"; depends=[ensembldb]; };
@ -108,7 +116,10 @@ in with self; {
EnsDb_Mmusculus_v79 = derive2 { name="EnsDb.Mmusculus.v79"; version="2.99.0"; sha256="1zpmq7v55if6q9r0h883q9k8l70ym20b01m9hxf121wb256rl9f7"; depends=[ensembldb]; };
EnsDb_Rnorvegicus_v75 = derive2 { name="EnsDb.Rnorvegicus.v75"; version="2.99.0"; sha256="02sx9l1p67ihkn0dfzbi08cpp8x4k2mjdqn7hvzfiaibsbqp70bb"; depends=[ensembldb]; };
EnsDb_Rnorvegicus_v79 = derive2 { name="EnsDb.Rnorvegicus.v79"; version="2.99.0"; sha256="1ki2hrn0a55f3ipxny0hpgl5ld9pjkhcwmvvqwwd99f3sqbxf3br"; depends=[ensembldb]; };
EuPathDB = derive2 { name="EuPathDB"; version="1.0.0"; sha256="08yl7zx5j6ywnrdcrrsvfkkxnvhrhrcddxw0g5sv90gy55zgv86n"; depends=[AnnotationHub AnnotationHubData Biobase BiocManager Biostrings GenomeInfoDbData GenomicRanges]; };
EpiTxDb_Hs_hg38 = derive2 { name="EpiTxDb.Hs.hg38"; version="0.99.3"; sha256="0hy1kjl2apzxpmg4a6yyg8c2j5ljphmjlm1in9b8g0ny1fjw4nci"; depends=[AnnotationHub EpiTxDb]; };
EpiTxDb_Mm_mm10 = derive2 { name="EpiTxDb.Mm.mm10"; version="0.99.4"; sha256="0n0g2spy89fz1632vj9lj0b072rjbixcxnfwgf6sdzp12lhsc60z"; depends=[AnnotationHub EpiTxDb]; };
EpiTxDb_Sc_sacCer3 = derive2 { name="EpiTxDb.Sc.sacCer3"; version="0.99.3"; sha256="0fdyzxfkdi9x2hbpw1q5g0wm8qwzgbzqdqh2nampdisrbfr73amm"; depends=[AnnotationHub EpiTxDb]; };
EuPathDB = derive2 { name="EuPathDB"; version="1.0.1"; sha256="0k23f34hnvcf2ig9sic7gf7pypc2jmwymg605qym7x32bjhi6rlm"; depends=[AnnotationHub AnnotationHubData Biobase BiocManager Biostrings GenomeInfoDbData GenomicRanges]; };
FDb_FANTOM4_promoters_hg19 = derive2 { name="FDb.FANTOM4.promoters.hg19"; version="1.0.0"; sha256="04sn5x1r5fcbghzw6n1bvy0z8zyhrbk86wsqz1p5gk665vicz8rw"; depends=[AnnotationDbi Biostrings GenomicFeatures]; };
FDb_InfiniumMethylation_hg18 = derive2 { name="FDb.InfiniumMethylation.hg18"; version="2.2.0"; sha256="0vwzqzj49imjdsn8ssiwqi7qic7rqw5pbsiinyxgy7y10fn2i42a"; depends=[AnnotationDbi Biostrings GenomicFeatures org_Hs_eg_db TxDb_Hsapiens_UCSC_hg18_knownGene]; };
FDb_InfiniumMethylation_hg19 = derive2 { name="FDb.InfiniumMethylation.hg19"; version="2.2.0"; sha256="0gq90fvph6kgrpjb89nvzq6hl1k24swn19rgjh5g98l86mja6nk0"; depends=[AnnotationDbi Biostrings GenomicFeatures org_Hs_eg_db TxDb_Hsapiens_UCSC_hg19_knownGene]; };
@ -116,8 +127,9 @@ in with self; {
FDb_UCSC_snp137common_hg19 = derive2 { name="FDb.UCSC.snp137common.hg19"; version="1.0.0"; sha256="1q1r7rk29q0zlzxz6fvfy1kjfli6wxzvhvhhfnf3z4ksy5332q63"; depends=[AnnotationDbi GenomicFeatures]; };
FDb_UCSC_tRNAs = derive2 { name="FDb.UCSC.tRNAs"; version="1.0.1"; sha256="1dymdalx9fzrplxyc0fd9faa4r5jimi7zyry9k65lyz1pabpkwqz"; depends=[AnnotationDbi GenomicFeatures]; };
GGHumanMethCancerPanelv1_db = derive2 { name="GGHumanMethCancerPanelv1.db"; version="1.4.1"; sha256="0ag1pkbh4mx4aplfrrz1q4f4cl05mczq9pcsfkd1071qk51dcwvx"; depends=[AnnotationDbi AnnotationForge org_Hs_eg_db]; };
GO_db = derive2 { name="GO.db"; version="3.7.0"; sha256="0i3wcf5h3n0dawzc1hy0kv74f06j80c47n4p3g3fmrcxlhi3jpa5"; depends=[AnnotationDbi]; };
GenomeInfoDbData = derive2 { name="GenomeInfoDbData"; version="1.2.0"; sha256="0di6nlqpsyqf693k2na65ayqldih563x3zfrczpqc5q2hl5kg35c"; depends=[]; };
GO_db = derive2 { name="GO.db"; version="3.11.4"; sha256="1sfrjgf013cwsll85p1q1idc2r6qjx2shsxgv33d9mw5kai4di2k"; depends=[AnnotationDbi]; };
GenomeInfoDbData = derive2 { name="GenomeInfoDbData"; version="1.2.3"; sha256="1swaqygs0hpgrxcggwjhz9y5j9yqxb85pncsr17r3rrcaky7jpcl"; depends=[]; };
GenomicState = derive2 { name="GenomicState"; version="0.99.9"; sha256="0qpa77bsycm3y82jrxq7r27gsygb1qbhkakz3cln3jv3sfkf0aj7"; depends=[AnnotationDbi AnnotationHub bumphunter derfinder GenomeInfoDb GenomicFeatures IRanges org_Hs_eg_db rtracklayer]; };
Homo_sapiens = derive2 { name="Homo.sapiens"; version="1.3.1"; sha256="151vj7h5p1c8yd5swrchk46z469p135wk50hvkl0nhgndvy0jj01"; depends=[AnnotationDbi GenomicFeatures GO_db org_Hs_eg_db OrganismDbi TxDb_Hsapiens_UCSC_hg19_knownGene]; };
Hs6UG171_db = derive2 { name="Hs6UG171.db"; version="3.2.3"; sha256="034aady3hy8j9bm7pbl8l8h0gcfnzmpyxg9l9s1ky0pj7ryzr93a"; depends=[AnnotationDbi org_Hs_eg_db]; };
HsAgilentDesign026652_db = derive2 { name="HsAgilentDesign026652.db"; version="3.2.3"; sha256="0x6nxvzmc8k4qp382ca32y58awkxpg0b3kc7m1mz9iag6sq7c5vx"; depends=[AnnotationDbi org_Hs_eg_db]; };
@ -137,118 +149,117 @@ in with self; {
IlluminaHumanMethylationEPICanno_ilm10b4_hg19 = derive2 { name="IlluminaHumanMethylationEPICanno.ilm10b4.hg19"; version="0.6.0"; sha256="0687b4k8hwfc18qgdd9ypv1skp37jd204fszba0gmrv3dc92i09c"; depends=[minfi]; };
IlluminaHumanMethylationEPICmanifest = derive2 { name="IlluminaHumanMethylationEPICmanifest"; version="0.3.0"; sha256="0alhjda5g186z8b1nsmnpfswrlj7prdz8mkwx60wkkl6hkcnk6p3"; depends=[minfi]; };
JASPAR2018 = derive2 { name="JASPAR2018"; version="1.1.1"; sha256="1iq5b51ryah2ccdx16yyigfa2jiapcpm94l6vgvd4v7b94jjp8l7"; depends=[]; };
JASPAR2020 = derive2 { name="JASPAR2020"; version="0.99.10"; sha256="0nrp63z7q2ivv5h87f7inpp2qll2dfgj4227l4rbnzii38a2vfdr"; depends=[]; };
JazaeriMetaData_db = derive2 { name="JazaeriMetaData.db"; version="3.2.3"; sha256="04lvcmm4ybxkfwgbiwcnpyj6kpbd0gd7jz6ijlbbvv6zdgdmvykb"; depends=[AnnotationDbi org_Hs_eg_db]; };
KEGG_db = derive2 { name="KEGG.db"; version="3.2.3"; sha256="0qv9in1nmnqcbjxh0y45x33xyw9zdp4jf5hmlvcsh1pclcq4dsh2"; depends=[AnnotationDbi]; };
KEGG_db = derive2 { name="KEGG.db"; version="3.2.4"; sha256="125dksxg6jx0mh6zfl0icnjca1j7j0i3ml8fq0f4klfbcjvd2q1f"; depends=[AnnotationDbi]; };
LAPOINTE_db = derive2 { name="LAPOINTE.db"; version="3.2.3"; sha256="0960gy5p4ybs5zs6251cgc3nk5a9gsh1nh23gkbkr3gc8jddinfm"; depends=[AnnotationDbi org_Hs_eg_db]; };
LRBase_Ath_eg_db = derive2 { name="LRBase.Ath.eg.db"; version="0.99.1"; sha256="0v7zyp6mngdfrqgx0fb6lj0ara7q4ch2dahnwqjk5y9psmvi8m16"; depends=[LRBaseDbi RSQLite]; };
LRBase_Bta_eg_db = derive2 { name="LRBase.Bta.eg.db"; version="0.99.1"; sha256="14yl5d4vmm2hjrlxsflwvkw18j0kcz364b3mc3fnxzbk8phisy3l"; depends=[LRBaseDbi RSQLite]; };
LRBase_Cel_eg_db = derive2 { name="LRBase.Cel.eg.db"; version="0.99.1"; sha256="18w8ay874qjs4qgb3g1j77k2fspvvvbyy3p85wgzy1yl839ngy3b"; depends=[LRBaseDbi RSQLite]; };
LRBase_Dme_eg_db = derive2 { name="LRBase.Dme.eg.db"; version="0.99.1"; sha256="0qbc5942g57mjdlhqpnapwq58bmi5xbc0mrqbqkfbxpx881ka2v6"; depends=[LRBaseDbi RSQLite]; };
LRBase_Dre_eg_db = derive2 { name="LRBase.Dre.eg.db"; version="0.99.1"; sha256="0wpx9dg2nhw20f3vvmaqy5yip8xwg1niswspxs4jv9krd0z6h5d8"; depends=[LRBaseDbi RSQLite]; };
LRBase_Gga_eg_db = derive2 { name="LRBase.Gga.eg.db"; version="0.99.1"; sha256="0nycj3h69ca2gxxmc08zvf0jv5zylfayhd6sgzrmqz0zsr0n5fxk"; depends=[LRBaseDbi RSQLite]; };
LRBase_Hsa_eg_db = derive2 { name="LRBase.Hsa.eg.db"; version="0.99.1"; sha256="0g690d63sp5pb0i28zvi80y41n6b31mzza46invjvq9c1j2rijzd"; depends=[LRBaseDbi RSQLite]; };
LRBase_Mmu_eg_db = derive2 { name="LRBase.Mmu.eg.db"; version="0.99.1"; sha256="0kmd69a31hw8i2p8qg64m074ypa102cfa7qpyz2m7nr6gwb3ik3z"; depends=[LRBaseDbi RSQLite]; };
LRBase_Pab_eg_db = derive2 { name="LRBase.Pab.eg.db"; version="0.99.1"; sha256="0scycwpdmr6yvfyqsani1372pmyqxzvv30wsvy8hx3km7dcd4ypz"; depends=[LRBaseDbi RSQLite]; };
LRBase_Rno_eg_db = derive2 { name="LRBase.Rno.eg.db"; version="0.99.1"; sha256="1b5rzb9kpnak90fb55y380qmspd8gah3wxvsliv1lddab65m5ch3"; depends=[LRBaseDbi RSQLite]; };
LRBase_Ssc_eg_db = derive2 { name="LRBase.Ssc.eg.db"; version="0.99.1"; sha256="1p1crrh3wkinvhqmy9b1h4j9yfvwbsykhm6b0xlhn0kzdqxlizjf"; depends=[LRBaseDbi RSQLite]; };
LRBase_Xtr_eg_db = derive2 { name="LRBase.Xtr.eg.db"; version="0.99.1"; sha256="0aqzcll2ylzbbq42ns0hp7l9p6343l2qlsv5zkglla1bxdxl6m4h"; depends=[LRBaseDbi RSQLite]; };
LRBase_Ath_eg_db = derive2 { name="LRBase.Ath.eg.db"; version="1.2.0"; sha256="1y2dgmqhv0x4ydvxq6dcg5m0gzcvlzb9jq4hs3axdyy8d62i8flh"; depends=[LRBaseDbi RSQLite]; };
LRBase_Bta_eg_db = derive2 { name="LRBase.Bta.eg.db"; version="1.2.0"; sha256="04z4fmfyl1k6m3paab6ip9h015q90xpxxn5lccm03k3pcv7wf5mh"; depends=[LRBaseDbi RSQLite]; };
LRBase_Cel_eg_db = derive2 { name="LRBase.Cel.eg.db"; version="1.2.0"; sha256="1kdcm469qkvncw92c5wjlgnfc9fnqpn15nc124zv0ykpx34fd922"; depends=[LRBaseDbi RSQLite]; };
LRBase_Dme_eg_db = derive2 { name="LRBase.Dme.eg.db"; version="1.2.0"; sha256="1amsik0g0pl72jfi8v9jnqpfs8rdsrq1ybly79lyhq1rpdjicayk"; depends=[LRBaseDbi RSQLite]; };
LRBase_Dre_eg_db = derive2 { name="LRBase.Dre.eg.db"; version="1.2.0"; sha256="16c0fcw6y4nqgvwzx3v8h822dbw3cbmb8h4sd7g9zwmylibbl35g"; depends=[LRBaseDbi RSQLite]; };
LRBase_Gga_eg_db = derive2 { name="LRBase.Gga.eg.db"; version="1.2.0"; sha256="1rdamsg3gikh22sfkafacl0b8507z5hk28j1vcaxdscrwwyrc6bz"; depends=[LRBaseDbi RSQLite]; };
LRBase_Hsa_eg_db = derive2 { name="LRBase.Hsa.eg.db"; version="1.2.0"; sha256="1qdyh4i016i40zn72h1x7194x1wi8pddl6cyln658k334p60x86l"; depends=[LRBaseDbi RSQLite]; };
LRBase_Mmu_eg_db = derive2 { name="LRBase.Mmu.eg.db"; version="1.2.0"; sha256="1viw7vhy3m7b7fwkm38y7f26bzywl1n2i1cff7mp91czss26bq9s"; depends=[LRBaseDbi RSQLite]; };
LRBase_Pab_eg_db = derive2 { name="LRBase.Pab.eg.db"; version="1.2.0"; sha256="1s5i4167ygwq35j60ns4f1yf6llasxx6wad61xng5p8lgq3186nr"; depends=[LRBaseDbi RSQLite]; };
LRBase_Rno_eg_db = derive2 { name="LRBase.Rno.eg.db"; version="1.2.0"; sha256="08xnr1wlg3lkjdmjdvy2i12ki3ym7z4gr3zvyj2ghkyn0gyd73gp"; depends=[LRBaseDbi RSQLite]; };
LRBase_Ssc_eg_db = derive2 { name="LRBase.Ssc.eg.db"; version="1.2.0"; sha256="0hqns1c4xgay7aagbhl46b9zwf5hp1p33jf9f28l5mxvvc96zrbn"; depends=[LRBaseDbi RSQLite]; };
LRBase_Xtr_eg_db = derive2 { name="LRBase.Xtr.eg.db"; version="1.2.0"; sha256="0kl6f7a1fxxrchz8s5dsh2vqsa8ckigi4clpnr76qvhlcfn77hk7"; depends=[LRBaseDbi RSQLite]; };
LowMACAAnnotation = derive2 { name="LowMACAAnnotation"; version="0.99.3"; sha256="0ri301ci54s8wwkah1jccy5h44xg8yjk08j5b15qmdsm25hli4wm"; depends=[]; };
LymphoSeqDB = derive2 { name="LymphoSeqDB"; version="0.99.2"; sha256="1cdyn2imjh4zr23szndc4vwyiacxs1jsp14gil2dyq9aifa25qr7"; depends=[]; };
MafDb_1Kgenomes_phase1_GRCh38 = derive2 { name="MafDb.1Kgenomes.phase1.GRCh38"; version="3.7.0"; sha256="160whyhwjspqji6ys19qgi4y3k7z1qqzr75nhpw0yl8h1rc6rfg0"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; };
MafDb_1Kgenomes_phase1_hs37d5 = derive2 { name="MafDb.1Kgenomes.phase1.hs37d5"; version="3.7.1"; sha256="1yxhb3kysgj95wdp7v5kq3bvn9xj09ywkfm2fdrkqxmzpan7q9q5"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; };
MafDb_1Kgenomes_phase3_GRCh38 = derive2 { name="MafDb.1Kgenomes.phase3.GRCh38"; version="3.7.0"; sha256="0z0v2kld7xqk2plrwb594q3al2kxi64k5phyknnpb0hhgddl688z"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; };
MafDb_1Kgenomes_phase3_hs37d5 = derive2 { name="MafDb.1Kgenomes.phase3.hs37d5"; version="3.7.0"; sha256="0rg4vzk3ik2ikdr57fp1za37kfpci6ha0qn8wpnyf8qyc3h9q5xf"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; };
MafDb_ESP6500SI_V2_SSA137_GRCh38 = derive2 { name="MafDb.ESP6500SI.V2.SSA137.GRCh38"; version="3.7.0"; sha256="1iybhk64lqar1b8qv1rjxzf53mci9bq684m4l7zqrz8g91jx7myq"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; };
MafDb_ESP6500SI_V2_SSA137_hs37d5 = derive2 { name="MafDb.ESP6500SI.V2.SSA137.hs37d5"; version="3.7.0"; sha256="1nfcnlwcx1sr2z4icg893zv3j9c9gnhd0nbgnjrl1fh2nrl25wsd"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; };
MafDb_ExAC_r1_0_GRCh38 = derive2 { name="MafDb.ExAC.r1.0.GRCh38"; version="3.7.0"; sha256="1xs52xivxjzg14d0fr3ifb29shysxvw062c3wzb1nfmnydixcqmf"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; };
MafDb_ExAC_r1_0_hs37d5 = derive2 { name="MafDb.ExAC.r1.0.hs37d5"; version="3.7.0"; sha256="00b022hzwr0l6m9wzw76iirdq5szvi5z8a9yi2i44sydhwqsb4cy"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; };
MafDb_ExAC_r1_0_nonTCGA_GRCh38 = derive2 { name="MafDb.ExAC.r1.0.nonTCGA.GRCh38"; version="3.7.0"; sha256="1dvzzwj9dhrls8caabdcgddsk64a6q9jqcya424h8n48fkx6fpjn"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; };
MafDb_ExAC_r1_0_nonTCGA_hs37d5 = derive2 { name="MafDb.ExAC.r1.0.nonTCGA.hs37d5"; version="3.7.0"; sha256="10rn7nqrnhmhdqcygi8l3cwf1385jyy56qzqjgqyhvmi4g8dnjsn"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; };
MafDb_TOPMed_freeze5_hg19 = derive2 { name="MafDb.TOPMed.freeze5.hg19"; version="3.7.1"; sha256="0a8rgh3lkbplg3y1yl0804f55dlw7v8lcb33ygg8kg39dk60m102"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; };
MafDb_TOPMed_freeze5_hg38 = derive2 { name="MafDb.TOPMed.freeze5.hg38"; version="3.7.1"; sha256="1kxk3qqw1igkygqmj8yjl4cp99fan1w84gilh6q35nsaja0fapa8"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; };
MafDb_gnomAD_r2_0_1_GRCh38 = derive2 { name="MafDb.gnomAD.r2.0.1.GRCh38"; version="3.7.0"; sha256="0dp82x6dag4ndizvppr2g5x1v8sbj08r6n7mi98c89fn4f7nvqqw"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; };
MafDb_gnomAD_r2_0_1_hs37d5 = derive2 { name="MafDb.gnomAD.r2.0.1.hs37d5"; version="3.8.0"; sha256="0kb50g4kmj1b4xm9p8q6j1yzpv5ygxf71vqhkb7c0ajqffqbyznm"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; };
MafDb_gnomAD_r2_1_hs37d5 = derive2 { name="MafDb.gnomAD.r2.1.hs37d5"; version="3.8.0"; sha256="00ld23685xlrkx9rpgrcqaycq3zxbxqg734r99avrw8p3lmj4fvc"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; };
MafDb_gnomADex_r2_0_1_GRCh38 = derive2 { name="MafDb.gnomADex.r2.0.1.GRCh38"; version="3.7.0"; sha256="0hwyyqa4g3hp85hk4b6qfzm10yk6h20sh0f2mf09yr0hpmkjyl59"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; };
MafDb_gnomADex_r2_0_1_hs37d5 = derive2 { name="MafDb.gnomADex.r2.0.1.hs37d5"; version="3.8.0"; sha256="0xz6ayip0cdbal6gsc8wpjyg3rr1kadaddv8flw5k8ky84mckzbc"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; };
MafDb_gnomADex_r2_1_hs37d5 = derive2 { name="MafDb.gnomADex.r2.1.hs37d5"; version="3.8.0"; sha256="06vicw9z05j1pw30sw0f2nkcixc14yn3anq0g3317i3rb1kvmwid"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; };
MeSH_AOR_db = derive2 { name="MeSH.AOR.db"; version="1.11.0"; sha256="02ysykmbn1b6rv3fbq71g9lnv16gvxyvb9p9smvm0k9brb7s0q24"; depends=[MeSHDbi]; };
MeSH_Aca_eg_db = derive2 { name="MeSH.Aca.eg.db"; version="1.11.0"; sha256="13x69ki5g99hravrfdll98z2n7nghvf02v920q4g2bgjzzh68sks"; depends=[MeSHDbi]; };
MeSH_Aga_PEST_eg_db = derive2 { name="MeSH.Aga.PEST.eg.db"; version="1.11.0"; sha256="1sffv89v1vrlgy36kf7q7ixnc2iwfaa2h0dsxrg0pjmzsq669h9s"; depends=[MeSHDbi]; };
MeSH_Ame_eg_db = derive2 { name="MeSH.Ame.eg.db"; version="1.11.0"; sha256="0ssivaq31rjagw5sdjg9ai3bm73mdvdrkqz0snf3phdgxpvldqms"; depends=[MeSHDbi]; };
MeSH_Aml_eg_db = derive2 { name="MeSH.Aml.eg.db"; version="1.11.0"; sha256="0cl95vipqcjf1pb9bjzvxa4dc0d5rzac84n9f6l061vhifa2c3pn"; depends=[MeSHDbi]; };
MeSH_Ana_eg_db = derive2 { name="MeSH.Ana.eg.db"; version="1.11.0"; sha256="190h3pch16bzx0h674kwywcy3pr1y16jbzczbmmvsxg1l2j549zm"; depends=[MeSHDbi]; };
MeSH_Ani_FGSC_eg_db = derive2 { name="MeSH.Ani.FGSC.eg.db"; version="1.11.0"; sha256="0w6gq9xy1v84ksbd849jpj073s51fbhgss8wl6ax4ybxvfp22m0s"; depends=[MeSHDbi]; };
MeSH_Ath_eg_db = derive2 { name="MeSH.Ath.eg.db"; version="1.11.0"; sha256="0jdxvnhxrajhd5dr6hzfii7b1n6x874qfc8999pw8y8rwh8c4ln7"; depends=[MeSHDbi]; };
MeSH_Bfl_eg_db = derive2 { name="MeSH.Bfl.eg.db"; version="1.11.0"; sha256="0vqyanf9n9ji77zkck3vyrrhm87hx3yxiy9fpwal6a0vh31vrjb9"; depends=[MeSHDbi]; };
MeSH_Bsu_168_eg_db = derive2 { name="MeSH.Bsu.168.eg.db"; version="1.11.0"; sha256="11f9jibxf0amhixhs2pvmx6ir1530qkm9xcjrj09hwyx687bs3z8"; depends=[MeSHDbi]; };
MeSH_Bta_eg_db = derive2 { name="MeSH.Bta.eg.db"; version="1.11.0"; sha256="03nbmbnbfvpja1p9rnqy1mpamlab0fd2y4fkx456jmnl87m1zk0n"; depends=[MeSHDbi]; };
MeSH_Cal_SC5314_eg_db = derive2 { name="MeSH.Cal.SC5314.eg.db"; version="1.11.0"; sha256="0pd9gigwrckz9drh3x7n9nvvcq2q2wwmczkhhkqlpp4qhg85yp7g"; depends=[MeSHDbi]; };
MeSH_Cbr_eg_db = derive2 { name="MeSH.Cbr.eg.db"; version="1.11.0"; sha256="1rjb9ldrn2jg73p2j9mjn61ljw83bhr07yq7482lp4mglhwvqibm"; depends=[MeSHDbi]; };
MeSH_Cel_eg_db = derive2 { name="MeSH.Cel.eg.db"; version="1.11.0"; sha256="14ywqllqgynwfxyxrkw2d6r7m2n82znx9s15l62d7jb88pvaajn6"; depends=[MeSHDbi]; };
MeSH_Cfa_eg_db = derive2 { name="MeSH.Cfa.eg.db"; version="1.11.0"; sha256="0b5b5dyh99gykdp3whdz7rjz1862p3w4jigy7s1bjmhv4pm3bn2d"; depends=[MeSHDbi]; };
MeSH_Cin_eg_db = derive2 { name="MeSH.Cin.eg.db"; version="1.11.0"; sha256="1cbwqyb4ja10j0250lggbpxgpivf0xj1m7hn4l687rdidxgrmy4s"; depends=[MeSHDbi]; };
MeSH_Cja_eg_db = derive2 { name="MeSH.Cja.eg.db"; version="1.11.0"; sha256="0b5q8yclcx18f8aq45ikv7qyw0xfsksjf1fbl6fprflvzfz2cnir"; depends=[MeSHDbi]; };
MeSH_Cpo_eg_db = derive2 { name="MeSH.Cpo.eg.db"; version="1.11.0"; sha256="1rd90rzipaa480sahh7pqlv1qzj1wcx543gkshj6mcfkr6r08zci"; depends=[MeSHDbi]; };
MeSH_Cre_eg_db = derive2 { name="MeSH.Cre.eg.db"; version="1.11.0"; sha256="0xg2mi60qlg76g1zxmybcixci8nivw4ld91qxf13jybcr0mwf9xn"; depends=[MeSHDbi]; };
MeSH_Dan_eg_db = derive2 { name="MeSH.Dan.eg.db"; version="1.11.0"; sha256="0l80s6v7p2n7p17chbk6a7y5y2b02z38x034jwg3yvyfqy073r11"; depends=[MeSHDbi]; };
MeSH_Dda_3937_eg_db = derive2 { name="MeSH.Dda.3937.eg.db"; version="1.11.0"; sha256="187zq75qz7jysz8jg5k5sgvxkrpvdyyi8xlsidi774nyb7z5d96l"; depends=[MeSHDbi]; };
MeSH_Ddi_AX4_eg_db = derive2 { name="MeSH.Ddi.AX4.eg.db"; version="1.11.0"; sha256="1aicyzgw5nx6z9q339cd1iabi7a1yjswla0j94anqwh783lqrpxq"; depends=[MeSHDbi]; };
MeSH_Der_eg_db = derive2 { name="MeSH.Der.eg.db"; version="1.11.0"; sha256="03rvcxawyhckg693w2ngnk3sljgz7idha6iqyax8p8wagl2h5ipv"; depends=[MeSHDbi]; };
MeSH_Dgr_eg_db = derive2 { name="MeSH.Dgr.eg.db"; version="1.11.0"; sha256="17d3ankadjsvddfqxqm3hnqcmsr2rknkbvraq6zpdl7xw3r21yfn"; depends=[MeSHDbi]; };
MeSH_Dme_eg_db = derive2 { name="MeSH.Dme.eg.db"; version="1.11.0"; sha256="1j3wsmspg7w30y04l173pihac9xg633w8zj2scz6jnph6rgxw3p1"; depends=[MeSHDbi]; };
MeSH_Dmo_eg_db = derive2 { name="MeSH.Dmo.eg.db"; version="1.11.0"; sha256="0640jfik9qp15h5180rn1afd2kv2wh5s0nbv2zjiz6089csb2fnf"; depends=[MeSHDbi]; };
MeSH_Dpe_eg_db = derive2 { name="MeSH.Dpe.eg.db"; version="1.11.0"; sha256="1y058sma4p48fj5f8v2i79nak5892pkk7rmr3i18jv44c8246zzl"; depends=[MeSHDbi]; };
MeSH_Dre_eg_db = derive2 { name="MeSH.Dre.eg.db"; version="1.11.0"; sha256="03dybrs5zhnil83jp37hq4rh8ybvyjnqpkr2vwa7f1kd65mq33za"; depends=[MeSHDbi]; };
MeSH_Dse_eg_db = derive2 { name="MeSH.Dse.eg.db"; version="1.11.0"; sha256="032kjhsm39jck9gxlg15g4x6n4r2iyi339vm6b9v4xcays45h9hi"; depends=[MeSHDbi]; };
MeSH_Dsi_eg_db = derive2 { name="MeSH.Dsi.eg.db"; version="1.11.0"; sha256="0h60gqkc4cjkbqs8i3x6z774qq4ihp20bssi70wli6fvsiysgbly"; depends=[MeSHDbi]; };
MeSH_Dvi_eg_db = derive2 { name="MeSH.Dvi.eg.db"; version="1.11.0"; sha256="1c8rg4h6gcs4y5gxz1z66a0ma3xpg4sdp6zwzcyrq02r2vjwj6ls"; depends=[MeSHDbi]; };
MeSH_Dya_eg_db = derive2 { name="MeSH.Dya.eg.db"; version="1.11.0"; sha256="03aycm5222wkx6rh7x204rkcxnh6amghm2zpzqiy4c5a2a871y9d"; depends=[MeSHDbi]; };
MeSH_Eco_55989_eg_db = derive2 { name="MeSH.Eco.55989.eg.db"; version="1.11.0"; sha256="0qqwwa3hk8ds2nv7xndqx4z9s00524sqrpgxh690yhdczn1ridqd"; depends=[MeSHDbi]; };
MeSH_Eco_ED1a_eg_db = derive2 { name="MeSH.Eco.ED1a.eg.db"; version="1.11.0"; sha256="1v47a80lvhhbl7sqx881nx1m4pqi6mprmgd03cvk4vhrgv74ji8f"; depends=[MeSHDbi]; };
MeSH_Eco_IAI39_eg_db = derive2 { name="MeSH.Eco.IAI39.eg.db"; version="1.11.0"; sha256="0mpabfvji1y1irgm5wkbinabriwbbb6wg6a0rc4mq5vn6j8nia36"; depends=[MeSHDbi]; };
MeSH_Eco_K12_MG1655_eg_db = derive2 { name="MeSH.Eco.K12.MG1655.eg.db"; version="1.11.0"; sha256="1sb0b82ibvk2n22a88c7qkmb3wch6zcgaah54p920dih2xxx24nb"; depends=[MeSHDbi]; };
MeSH_Eco_O157_H7_Sakai_eg_db = derive2 { name="MeSH.Eco.O157.H7.Sakai.eg.db"; version="1.11.0"; sha256="1i65691h3w34kvqswfkg6klpj8gm39p6csa8da4hlbwc7q58zzpf"; depends=[MeSHDbi]; };
MeSH_Eco_UMN026_eg_db = derive2 { name="MeSH.Eco.UMN026.eg.db"; version="1.11.0"; sha256="12yrsy71g0r6w028i56kxknkb4gr34x4d6064m61023234j31j69"; depends=[MeSHDbi]; };
MeSH_Eqc_eg_db = derive2 { name="MeSH.Eqc.eg.db"; version="1.11.0"; sha256="19ihdqwlrifd6nyi1bbxnjbq7qqb535d47mm5h0f1pz2h6w6jps6"; depends=[MeSHDbi]; };
MeSH_Gga_eg_db = derive2 { name="MeSH.Gga.eg.db"; version="1.11.0"; sha256="1f2f9vqdaqi6iak6yg3rcgcpvhaz76zl4hywnlz1gi7aszxiff0k"; depends=[MeSHDbi]; };
MeSH_Gma_eg_db = derive2 { name="MeSH.Gma.eg.db"; version="1.11.0"; sha256="075hhjahc34bznvmqrlc6vnlq25c4ybsyd6ry5qmnzccpxyqhgv8"; depends=[MeSHDbi]; };
MeSH_Hsa_eg_db = derive2 { name="MeSH.Hsa.eg.db"; version="1.11.0"; sha256="0c7kb73jrr74a05jgyf903bvy92pn23aklflnl2cqqwxqjc6f9hm"; depends=[MeSHDbi]; };
MeSH_Laf_eg_db = derive2 { name="MeSH.Laf.eg.db"; version="1.11.0"; sha256="1zg7c08z6j02sg74ff1q3hnmy5bszd6g5dyr0hxxqivx28bmirya"; depends=[MeSHDbi]; };
MeSH_Lma_eg_db = derive2 { name="MeSH.Lma.eg.db"; version="1.11.0"; sha256="1p70v5bvhawsh954mmnxiy734n0z6b0mfl4j3i2g3jijwrds9f6v"; depends=[MeSHDbi]; };
MeSH_Mdo_eg_db = derive2 { name="MeSH.Mdo.eg.db"; version="1.11.0"; sha256="0997k7iwq49sf2fn88lgx5j3rhsv9g7mldsm2bpsqmw52d8j568f"; depends=[MeSHDbi]; };
MeSH_Mes_eg_db = derive2 { name="MeSH.Mes.eg.db"; version="1.11.0"; sha256="16pxwy7yycdp59j3nvz58jc8h2y251b4prpk4nn589z7pk37hw52"; depends=[MeSHDbi]; };
MeSH_Mga_eg_db = derive2 { name="MeSH.Mga.eg.db"; version="1.11.0"; sha256="0dmdfi983i2sf56b06p7q1w7n8ik3j1dkfw1x1cc207wmmns4916"; depends=[MeSHDbi]; };
MeSH_Miy_eg_db = derive2 { name="MeSH.Miy.eg.db"; version="1.11.0"; sha256="024076n31mpz2fr7dbf5di6gxn1w1gajx95065vl4555zx46i9n1"; depends=[MeSHDbi]; };
MeSH_Mml_eg_db = derive2 { name="MeSH.Mml.eg.db"; version="1.11.0"; sha256="0rbnysb12i2f1a9xz0869m5n031j60c8bxnj1cp0zxlnylamf7w0"; depends=[MeSHDbi]; };
MeSH_Mmu_eg_db = derive2 { name="MeSH.Mmu.eg.db"; version="1.11.0"; sha256="1h9jz00bgz54nknl95jf60qqgmn5iyq766sdkxn7r54h9315c9g9"; depends=[MeSHDbi]; };
MeSH_Mtr_eg_db = derive2 { name="MeSH.Mtr.eg.db"; version="1.11.0"; sha256="1b4nhix3ky4d0cm8hix9m7chcgdyskvd0h7fj3k13a4zxyxvfw9x"; depends=[MeSHDbi]; };
MeSH_Nle_eg_db = derive2 { name="MeSH.Nle.eg.db"; version="1.11.0"; sha256="16fcswjrv056g5d6ikf2g8af470djf02pyxhp5ib6gk932vl7kp0"; depends=[MeSHDbi]; };
MeSH_Oan_eg_db = derive2 { name="MeSH.Oan.eg.db"; version="1.11.0"; sha256="08cdkyvwss0cczd6j19j02950jpqhhzi79y9swqnzzh3nydb3aqj"; depends=[MeSHDbi]; };
MeSH_Ocu_eg_db = derive2 { name="MeSH.Ocu.eg.db"; version="1.11.0"; sha256="09nigd6hc3iy3s2r70ixfyj04la8cnaxhvr5i1k0adapjgf4q1mx"; depends=[MeSHDbi]; };
MeSH_Oni_eg_db = derive2 { name="MeSH.Oni.eg.db"; version="1.11.0"; sha256="1cwhbrpiznkfbkxchpddkr68jzcxzn0mvn8cy81dm0vj4x8dxjb8"; depends=[MeSHDbi]; };
MeSH_Osa_eg_db = derive2 { name="MeSH.Osa.eg.db"; version="1.11.0"; sha256="0psaqhdi4hicy5vkngkh7ig5ndsjl768n9fg36zlvqllww58kfis"; depends=[MeSHDbi]; };
MeSH_PCR_db = derive2 { name="MeSH.PCR.db"; version="1.11.0"; sha256="0jdwxkwinbnvap0mpirzcd4zgfvhsmca2r57s2lzh2i1x24hxa4c"; depends=[MeSHDbi]; };
MeSH_Pab_eg_db = derive2 { name="MeSH.Pab.eg.db"; version="1.11.0"; sha256="16qcm0d8m53dkwfbcsygbm3xj7x6hblwpa4agds5vnlkb26m48qn"; depends=[MeSHDbi]; };
MeSH_Pae_PAO1_eg_db = derive2 { name="MeSH.Pae.PAO1.eg.db"; version="1.11.0"; sha256="1w3zqynqjv79ixxnmn3khvj3p6586nq48dx00rap6vzirmhzigqv"; depends=[MeSHDbi]; };
MeSH_Pfa_3D7_eg_db = derive2 { name="MeSH.Pfa.3D7.eg.db"; version="1.11.0"; sha256="0ryxhk5g07fpnnk72q5a2847k6w509956fcxnrvwvp7f98p3z50x"; depends=[MeSHDbi]; };
MeSH_Pto_eg_db = derive2 { name="MeSH.Pto.eg.db"; version="1.11.0"; sha256="0i1772rpq95ppzxa809ms1r65d9rk5vqhcl36ndjs2lhzdydw8fz"; depends=[MeSHDbi]; };
MeSH_Ptr_eg_db = derive2 { name="MeSH.Ptr.eg.db"; version="1.11.0"; sha256="0xgi89vzhxkmqx0y84i58jkxikksqdi64r82p59ir6l1anpyvvc9"; depends=[MeSHDbi]; };
MeSH_Rno_eg_db = derive2 { name="MeSH.Rno.eg.db"; version="1.11.0"; sha256="0g0fnackq1yjaw0b3ppzbcj0sfx288wm6cv57ly69svfg1n0wlk5"; depends=[MeSHDbi]; };
MeSH_Sce_S288c_eg_db = derive2 { name="MeSH.Sce.S288c.eg.db"; version="1.11.0"; sha256="1z29d19is5lq8rqrkk1dyifgn0v2i68pbw8i7dlwnnicj2sfpynb"; depends=[MeSHDbi]; };
MeSH_Sco_A32_eg_db = derive2 { name="MeSH.Sco.A32.eg.db"; version="1.11.0"; sha256="0dcxjlpc9diz1lvrkpbrab5zjz96r837x7ij9786966a3x458xk0"; depends=[MeSHDbi]; };
MeSH_Sil_eg_db = derive2 { name="MeSH.Sil.eg.db"; version="1.11.0"; sha256="0gpj4i2mls1qkyivxy2gk3b8w9vkxnwf2b0cpmbv5bvpjcsbw47i"; depends=[MeSHDbi]; };
MeSH_Spu_eg_db = derive2 { name="MeSH.Spu.eg.db"; version="1.11.0"; sha256="14knm1h8mp5qfjbny2wwkj772x72laxgymhsa04m78mb38qhypwq"; depends=[MeSHDbi]; };
MeSH_Ssc_eg_db = derive2 { name="MeSH.Ssc.eg.db"; version="1.11.0"; sha256="0hwgkq669g99yrkbpk3pjpxbz7q0vwvkcx3rrvdk9dnjinlbcn54"; depends=[MeSHDbi]; };
MeSH_Syn_eg_db = derive2 { name="MeSH.Syn.eg.db"; version="1.11.0"; sha256="1mz986apgfd6sn62wws948yi46r87fzaszxnv450fgc42l23l0jx"; depends=[MeSHDbi]; };
MeSH_Tbr_9274_eg_db = derive2 { name="MeSH.Tbr.9274.eg.db"; version="1.11.0"; sha256="0dvz5xbx6vdmqibpq8xmpdjfvvqw7iqq3w4d350sxj5kaw2afp5s"; depends=[MeSHDbi]; };
MeSH_Tgo_ME49_eg_db = derive2 { name="MeSH.Tgo.ME49.eg.db"; version="1.11.0"; sha256="08hyvaqsvdpcizsqr53ab6bfh1fnlsj8d62pq03lpgr96rlyqi8q"; depends=[MeSHDbi]; };
MeSH_Tgu_eg_db = derive2 { name="MeSH.Tgu.eg.db"; version="1.11.0"; sha256="0mid3qmv7kxc7kn69vbhgchvrbv4fig97nw9zxsbd0rj66abzas2"; depends=[MeSHDbi]; };
MeSH_Vvi_eg_db = derive2 { name="MeSH.Vvi.eg.db"; version="1.11.0"; sha256="1pwq58mm7ripnzxcn13k1y157pjasrv30xxmrrqb4rv55nk61vbf"; depends=[MeSHDbi]; };
MeSH_Xla_eg_db = derive2 { name="MeSH.Xla.eg.db"; version="1.11.0"; sha256="0qd75lkyrs864sy3sci3bablipn9gabk24wbriis9bi0qf7hccv5"; depends=[MeSHDbi]; };
MeSH_Xtr_eg_db = derive2 { name="MeSH.Xtr.eg.db"; version="1.11.0"; sha256="0djsx876h0xz0h8jhs6yad8iqqjlr72b0fxasqgh89zpfp2hkvwd"; depends=[MeSHDbi]; };
MeSH_Zma_eg_db = derive2 { name="MeSH.Zma.eg.db"; version="1.11.0"; sha256="08b92lhq2gbvbm7y0q4zc991wi1fjhm68n03b782h2g6syczmlma"; depends=[MeSHDbi]; };
MeSH_db = derive2 { name="MeSH.db"; version="1.11.0"; sha256="1l6hynwmhb8p666q8n9dnvd0nhjy1f9nz2jg3z2p13dc5jl6syiw"; depends=[MeSHDbi]; };
MafDb_1Kgenomes_phase1_GRCh38 = derive2 { name="MafDb.1Kgenomes.phase1.GRCh38"; version="3.10.0"; sha256="057531mvxip32lyqak4hh964ms0cil29p5cch5fpjw5vbbzidrlc"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; };
MafDb_1Kgenomes_phase1_hs37d5 = derive2 { name="MafDb.1Kgenomes.phase1.hs37d5"; version="3.10.0"; sha256="0vsjik59qa36w402bcrd5z27wc9vyp4gl0ffcwskd9iwjqim0phi"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; };
MafDb_1Kgenomes_phase3_GRCh38 = derive2 { name="MafDb.1Kgenomes.phase3.GRCh38"; version="3.10.0"; sha256="0ibww7ml5cfyx8h198fgrnf13vvsxxb5spf7hcmm6z3hha6j2ij0"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; };
MafDb_1Kgenomes_phase3_hs37d5 = derive2 { name="MafDb.1Kgenomes.phase3.hs37d5"; version="3.10.0"; sha256="1c2bxgy3bpbszfsqlk262lv45x1fgqyywk9i9nax7bpahlcpp68d"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; };
MafDb_ExAC_r1_0_GRCh38 = derive2 { name="MafDb.ExAC.r1.0.GRCh38"; version="3.10.0"; sha256="02mlwkx9kal4h1q1h3c2pdragir9bh63vg1wyagmh8capf19zx5c"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; };
MafDb_ExAC_r1_0_hs37d5 = derive2 { name="MafDb.ExAC.r1.0.hs37d5"; version="3.10.0"; sha256="18czbllphsccb2hs02g6jz517ylxsvx12czwh4xz7vym6q4br0cz"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; };
MafDb_ExAC_r1_0_nonTCGA_GRCh38 = derive2 { name="MafDb.ExAC.r1.0.nonTCGA.GRCh38"; version="3.10.0"; sha256="16rsm24nlz7jdnqk1p0avn9dlxkbbjd50nja5pcg0z18m30srlya"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; };
MafDb_ExAC_r1_0_nonTCGA_hs37d5 = derive2 { name="MafDb.ExAC.r1.0.nonTCGA.hs37d5"; version="3.10.0"; sha256="1srwc9n9x0ilipqwvm95khy4w2dnn1fkxyrrlcqfwv96gl7141x5"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; };
MafDb_TOPMed_freeze5_hg19 = derive2 { name="MafDb.TOPMed.freeze5.hg19"; version="3.10.0"; sha256="1fxq5jq4g6rys909v0a4lbrcgfdk844wgihn0ary509w8ifdkxdv"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; };
MafDb_TOPMed_freeze5_hg38 = derive2 { name="MafDb.TOPMed.freeze5.hg38"; version="3.10.0"; sha256="0yd9r26l2s3ykw5d2lndnx4m1h401g7hsnkk0wywczdc1xa39y4n"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; };
MafDb_gnomAD_r2_1_GRCh38 = derive2 { name="MafDb.gnomAD.r2.1.GRCh38"; version="3.10.0"; sha256="1bshq6ncns7xdrpkkc84m4x6a1pnm3ssp02f0d23yhlkhh0h40zd"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; };
MafDb_gnomAD_r2_1_hs37d5 = derive2 { name="MafDb.gnomAD.r2.1.hs37d5"; version="3.10.0"; sha256="153dy3lx0islfdkmyik7lxp1w2yzb0bqmia673hlwi4rmvns112h"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; };
MafDb_gnomAD_r3_0_GRCh38 = derive2 { name="MafDb.gnomAD.r3.0.GRCh38"; version="3.11.0"; sha256="1zsgaxjapw78x2mdbcf31g840pdnbibyjzxd26mgnpv5nyrjbhwz"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; };
MafDb_gnomADex_r2_1_GRCh38 = derive2 { name="MafDb.gnomADex.r2.1.GRCh38"; version="3.10.0"; sha256="1v0sdjmn9z8gqn4yj4v04zycj3ngr32r04zqmkp6y41hcgdr8lxw"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; };
MafDb_gnomADex_r2_1_hs37d5 = derive2 { name="MafDb.gnomADex.r2.1.hs37d5"; version="3.10.0"; sha256="0y42ncmilijdxsgqsmskz7gff3il3fdf2kpflknmz1z9kybzaday"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; };
MafH5_gnomAD_r3_0_GRCh38 = derive2 { name="MafH5.gnomAD.r3.0.GRCh38"; version="3.11.0"; sha256="1m793ri39gjm41yfq3yglg7dxyqd2ss0i0vvivqxigff63iz8awh"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores HDF5Array IRanges rhdf5 S4Vectors]; };
MeSH_AOR_db = derive2 { name="MeSH.AOR.db"; version="1.13.0"; sha256="0l55b03072s052ji52glqpqc8x0z7d4fkf392113bskmplgcg3ny"; depends=[MeSHDbi]; };
MeSH_Aca_eg_db = derive2 { name="MeSH.Aca.eg.db"; version="1.13.0"; sha256="061bp9y592h57y0i4y6aah9vln23f1mk1yzx9fxhimnd4rzmwzl4"; depends=[MeSHDbi]; };
MeSH_Aga_PEST_eg_db = derive2 { name="MeSH.Aga.PEST.eg.db"; version="1.13.0"; sha256="10253yy1gv96x6h92xz35qhz087ma6whr5pbi69mjdfc21pzyc7a"; depends=[MeSHDbi]; };
MeSH_Ame_eg_db = derive2 { name="MeSH.Ame.eg.db"; version="1.13.0"; sha256="19aw7vq6iafhjb1n7kgbyaib2di682dia0yjc4r3cnzv7k7kv8z0"; depends=[MeSHDbi]; };
MeSH_Aml_eg_db = derive2 { name="MeSH.Aml.eg.db"; version="1.13.0"; sha256="0ljijw7p5nxvgda2jb3gf6x03y046ihxz7nl2s90rgf4s1fjciaf"; depends=[MeSHDbi]; };
MeSH_Ana_eg_db = derive2 { name="MeSH.Ana.eg.db"; version="1.13.0"; sha256="1afv8yf2yggid12id0j5v5gf5qhcdmanfanp2d13cnkzgxkr88js"; depends=[MeSHDbi]; };
MeSH_Ani_FGSC_eg_db = derive2 { name="MeSH.Ani.FGSC.eg.db"; version="1.13.0"; sha256="1amgb9gr5aa1cgggf2x5ailzm4mfq78lfqnx1yzq1ix3nh5idajf"; depends=[MeSHDbi]; };
MeSH_Ath_eg_db = derive2 { name="MeSH.Ath.eg.db"; version="1.13.0"; sha256="0byxvlwcix154qbpvpgv9zblyn1wx6npn366303v81r6x5gh4qkh"; depends=[MeSHDbi]; };
MeSH_Bfl_eg_db = derive2 { name="MeSH.Bfl.eg.db"; version="1.13.0"; sha256="1v1f7b0qyii8nakn7lhckbyqyw43101i2y0dcamp5lds8m79691d"; depends=[MeSHDbi]; };
MeSH_Bsu_168_eg_db = derive2 { name="MeSH.Bsu.168.eg.db"; version="1.13.0"; sha256="1rr4yr0n2zdkcq2xj7cyv683sgv5mnjwcylz4r8wkrdhji28zyyh"; depends=[MeSHDbi]; };
MeSH_Bta_eg_db = derive2 { name="MeSH.Bta.eg.db"; version="1.13.0"; sha256="1nz96wyw99rz2wlsa59y36ddxg3i4vz116i4sjvm3ww2q71nimmr"; depends=[MeSHDbi]; };
MeSH_Cal_SC5314_eg_db = derive2 { name="MeSH.Cal.SC5314.eg.db"; version="1.13.0"; sha256="0irsxad7s1asllwajwy1bl2frs22sgwv60fdgnslgxmngg5v6jbc"; depends=[MeSHDbi]; };
MeSH_Cbr_eg_db = derive2 { name="MeSH.Cbr.eg.db"; version="1.13.0"; sha256="0qq08f245qsq6c9g38wcbn9gnhhx2wlsas3na1n5fycr5d19qbvz"; depends=[MeSHDbi]; };
MeSH_Cel_eg_db = derive2 { name="MeSH.Cel.eg.db"; version="1.13.0"; sha256="0mjg8dinlp1qqnf2h1lpyhig9ywa9x99isyvj2z37mrbk9mh6si6"; depends=[MeSHDbi]; };
MeSH_Cfa_eg_db = derive2 { name="MeSH.Cfa.eg.db"; version="1.13.0"; sha256="1xlcn55v3hyngdqmb5a3v64ll1cmm1yd8gbxw3sbbbnwp349w2jb"; depends=[MeSHDbi]; };
MeSH_Cin_eg_db = derive2 { name="MeSH.Cin.eg.db"; version="1.13.0"; sha256="13naakq86kgkbd8cif5gi7hzag64xkp8mddrwn4hc67i1dzlfyq0"; depends=[MeSHDbi]; };
MeSH_Cja_eg_db = derive2 { name="MeSH.Cja.eg.db"; version="1.13.0"; sha256="1b4sl5qiwh0vxm1svwqwsbrz2b88jmf7s14nwhb27431ml5lya03"; depends=[MeSHDbi]; };
MeSH_Cpo_eg_db = derive2 { name="MeSH.Cpo.eg.db"; version="1.13.0"; sha256="12qak3gzbr7hpg08nmpa69h0qw0v4kdplf10ilycc8ra1nrm9s8x"; depends=[MeSHDbi]; };
MeSH_Cre_eg_db = derive2 { name="MeSH.Cre.eg.db"; version="1.13.0"; sha256="1gp33ga0gdd09flz1c9q7hf3y8si238zb6hmn1v9pqmkww5pns3g"; depends=[MeSHDbi]; };
MeSH_Dan_eg_db = derive2 { name="MeSH.Dan.eg.db"; version="1.13.0"; sha256="0v3jlfg95fgh4f5gnqz1prb2lwj1bn7ggparxqzc63j0jws0wmgp"; depends=[MeSHDbi]; };
MeSH_Dda_3937_eg_db = derive2 { name="MeSH.Dda.3937.eg.db"; version="1.12.0"; sha256="1vhg07r0yk876zlzbn86nj6g91ilrnfrj3p5q2pkrcsic0m5nwcw"; depends=[MeSHDbi]; };
MeSH_Ddi_AX4_eg_db = derive2 { name="MeSH.Ddi.AX4.eg.db"; version="1.13.0"; sha256="12kc26wsg390hzhi4x2rmnm1s38sqs4nckkvrnmv70mjabg34w49"; depends=[MeSHDbi]; };
MeSH_Der_eg_db = derive2 { name="MeSH.Der.eg.db"; version="1.13.0"; sha256="171nrhd4nqpgcaaa62gj1di2xdsy3n8pp09lsbyq4slasmcd450w"; depends=[MeSHDbi]; };
MeSH_Dgr_eg_db = derive2 { name="MeSH.Dgr.eg.db"; version="1.13.0"; sha256="15nb1pbnfkhr83q06irghi4r7la5h6dn993la3sn1f8614hcr2wd"; depends=[MeSHDbi]; };
MeSH_Dme_eg_db = derive2 { name="MeSH.Dme.eg.db"; version="1.13.0"; sha256="1jgvbp0g4armmvg2w5rpxkx8zclll5nl6j6zbq9d1w7kk4lazw83"; depends=[MeSHDbi]; };
MeSH_Dmo_eg_db = derive2 { name="MeSH.Dmo.eg.db"; version="1.13.0"; sha256="0p3p4ld74hszgvv6xd5kmd7i9glv1l4mdqigglr1sk4vig1qwg47"; depends=[MeSHDbi]; };
MeSH_Dpe_eg_db = derive2 { name="MeSH.Dpe.eg.db"; version="1.13.0"; sha256="0pbd49s4n1mar58did4amrq5h78ic54gk6fnlyicddf7xg24qsp5"; depends=[MeSHDbi]; };
MeSH_Dre_eg_db = derive2 { name="MeSH.Dre.eg.db"; version="1.13.0"; sha256="1bga7nlfkyqqxq4m9c44l6hnswqa3dfbjzbnnyh8xmyp7m91kbj3"; depends=[MeSHDbi]; };
MeSH_Dse_eg_db = derive2 { name="MeSH.Dse.eg.db"; version="1.13.0"; sha256="0vaz520r54ydbb0why68hnigd924y3vk72357cms363qs6753dij"; depends=[MeSHDbi]; };
MeSH_Dsi_eg_db = derive2 { name="MeSH.Dsi.eg.db"; version="1.13.0"; sha256="1fjdb5h3dsgxk38c1fff30knnhav9w6pdl7vqdfdhq7642c6a1y4"; depends=[MeSHDbi]; };
MeSH_Dvi_eg_db = derive2 { name="MeSH.Dvi.eg.db"; version="1.13.0"; sha256="1vqwdf8sj0qid2df0qqhxlwbccmlmw63kmhdmz49fz3hxyr081z5"; depends=[MeSHDbi]; };
MeSH_Dya_eg_db = derive2 { name="MeSH.Dya.eg.db"; version="1.13.0"; sha256="1ixn62rn6vc17ks23hn9hkfyynp3p7mf9wq3rw9wiyyzpl6xgqw0"; depends=[MeSHDbi]; };
MeSH_Eco_55989_eg_db = derive2 { name="MeSH.Eco.55989.eg.db"; version="1.13.0"; sha256="118j864y3bn386cgjbwqwvdjflk7f510yzx451w9mcbfm7af8nqh"; depends=[MeSHDbi]; };
MeSH_Eco_ED1a_eg_db = derive2 { name="MeSH.Eco.ED1a.eg.db"; version="1.13.0"; sha256="094h4w8p0h81pqz4f1ykk0285fq5cayvkv01712bi85qqvyc8vh0"; depends=[MeSHDbi]; };
MeSH_Eco_IAI39_eg_db = derive2 { name="MeSH.Eco.IAI39.eg.db"; version="1.13.0"; sha256="19xj1x0bnxk8y3n7cjihp7aa1l6vvy6d3m949zv0cs9ia8mw5lrh"; depends=[MeSHDbi]; };
MeSH_Eco_K12_MG1655_eg_db = derive2 { name="MeSH.Eco.K12.MG1655.eg.db"; version="1.13.0"; sha256="1m2zi73d23hqa7dn8ab6bm3ynjc4mngakcba5wa3fkvv972kba26"; depends=[MeSHDbi]; };
MeSH_Eco_O157_H7_Sakai_eg_db = derive2 { name="MeSH.Eco.O157.H7.Sakai.eg.db"; version="1.13.0"; sha256="0sgp5hckh3waa1bp43rsnx6hlcvjr7a6yw46m6r3jzwdfpkmbh4v"; depends=[MeSHDbi]; };
MeSH_Eco_UMN026_eg_db = derive2 { name="MeSH.Eco.UMN026.eg.db"; version="1.13.0"; sha256="17k0h1jfiqwg6396m3mnsq3v042p8rck19wdhrgdasb6vp7rnk7w"; depends=[MeSHDbi]; };
MeSH_Eqc_eg_db = derive2 { name="MeSH.Eqc.eg.db"; version="1.13.0"; sha256="0z68zs190sv1v7r0059hf5c3mcrv2hil3hx3liycck2fiwarjw8d"; depends=[MeSHDbi]; };
MeSH_Gga_eg_db = derive2 { name="MeSH.Gga.eg.db"; version="1.13.0"; sha256="0nbc8710nwjlxxcslljcfj72qlq1k64i8p4jvyddjp8fj8anca9f"; depends=[MeSHDbi]; };
MeSH_Gma_eg_db = derive2 { name="MeSH.Gma.eg.db"; version="1.13.0"; sha256="0s45w1rnz79azqkk852knicviqc6jisxnpkzmm4j6ydjqibz4xv0"; depends=[MeSHDbi]; };
MeSH_Hsa_eg_db = derive2 { name="MeSH.Hsa.eg.db"; version="1.13.0"; sha256="1azm323gqax1ffixvqqghqbbmv7gfq5jhxhn1qr07raml1z56yiw"; depends=[MeSHDbi]; };
MeSH_Laf_eg_db = derive2 { name="MeSH.Laf.eg.db"; version="1.13.0"; sha256="0aix6k1lmdd4wms4dcmhw35gsyn07cvir60wslcabsvccjxbip4i"; depends=[MeSHDbi]; };
MeSH_Lma_eg_db = derive2 { name="MeSH.Lma.eg.db"; version="1.13.0"; sha256="1fb3xhwf08h91pmb7nmkz68zwrg8ac1sk55923baa6bn9bwli2ny"; depends=[MeSHDbi]; };
MeSH_Mdo_eg_db = derive2 { name="MeSH.Mdo.eg.db"; version="1.13.0"; sha256="0py8r05ix4k6xfm3jnzkgzk59gzc1bj43271rbgsmqlyh42abgay"; depends=[MeSHDbi]; };
MeSH_Mes_eg_db = derive2 { name="MeSH.Mes.eg.db"; version="1.13.0"; sha256="01mmn4021cscnp9wfz84rxckqqfn4p98bh4g1mlgwb7wsgf5nbc9"; depends=[MeSHDbi]; };
MeSH_Mga_eg_db = derive2 { name="MeSH.Mga.eg.db"; version="1.13.0"; sha256="1h4y7iqqb4fili8k4k11z5nmgd0hq8rw7p7awjwl6w5v4n9im0fs"; depends=[MeSHDbi]; };
MeSH_Miy_eg_db = derive2 { name="MeSH.Miy.eg.db"; version="1.13.0"; sha256="03rj89bmw4j2fc9lnpwx479j5m089jcj6iisf339bzcw1rgryi56"; depends=[MeSHDbi]; };
MeSH_Mml_eg_db = derive2 { name="MeSH.Mml.eg.db"; version="1.13.0"; sha256="1r2c422w1c88w4sh3s8mqpffx10322c3j44qz4ymxgvnarxc3fkh"; depends=[MeSHDbi]; };
MeSH_Mmu_eg_db = derive2 { name="MeSH.Mmu.eg.db"; version="1.13.0"; sha256="09s2d9hjzzhlig2bnnr5wkpxgf8pj4q9hwvs4sj3ylabvlg5ak09"; depends=[MeSHDbi]; };
MeSH_Mtr_eg_db = derive2 { name="MeSH.Mtr.eg.db"; version="1.13.0"; sha256="0l0w4px7wp58rqry4xbz2qh5jc97mmw7pvc1dnhkknr6n96fcpik"; depends=[MeSHDbi]; };
MeSH_Nle_eg_db = derive2 { name="MeSH.Nle.eg.db"; version="1.13.0"; sha256="1v4jcsdww7j0rnck3r30g8p57419ai676qlawmra1w6sdflqcpj9"; depends=[MeSHDbi]; };
MeSH_Oan_eg_db = derive2 { name="MeSH.Oan.eg.db"; version="1.13.0"; sha256="0a6mxwmvsh6zcyqw83y7y1axviqrzy2kdbalh2w8xa3yn72z65ln"; depends=[MeSHDbi]; };
MeSH_Ocu_eg_db = derive2 { name="MeSH.Ocu.eg.db"; version="1.13.0"; sha256="1n197svyc3p4xf3lc5qdjnhlkiadra43bxdqisk2w60jdijnxyh0"; depends=[MeSHDbi]; };
MeSH_Oni_eg_db = derive2 { name="MeSH.Oni.eg.db"; version="1.13.0"; sha256="1h7iqb9kcxcgslm8rab4469vvay3msd3w08bxv3h0mq7q870z0r8"; depends=[MeSHDbi]; };
MeSH_Osa_eg_db = derive2 { name="MeSH.Osa.eg.db"; version="1.13.0"; sha256="0mxs9bjs0pnj9aszfdydkw2kljcixwflvwcaz94my30444c1pi9l"; depends=[MeSHDbi]; };
MeSH_PCR_db = derive2 { name="MeSH.PCR.db"; version="1.13.0"; sha256="03fcidamz9x0xgyl5fsvphc7l5v2hvr4izf6ma2g34a1l1qhs0g1"; depends=[MeSHDbi]; };
MeSH_Pab_eg_db = derive2 { name="MeSH.Pab.eg.db"; version="1.13.0"; sha256="0vyi7awyy3v851ylc95xrn5wvbprq1qq3x1ypsb31qqny940m5rf"; depends=[MeSHDbi]; };
MeSH_Pae_PAO1_eg_db = derive2 { name="MeSH.Pae.PAO1.eg.db"; version="1.13.0"; sha256="18amkwn9wglj3a5hh9b0zfd23vizmj1nfa90jz93w1adksjlky7v"; depends=[MeSHDbi]; };
MeSH_Pfa_3D7_eg_db = derive2 { name="MeSH.Pfa.3D7.eg.db"; version="1.13.0"; sha256="1yrx8dj0lx77qny0dha68lwy3x3c9d4rkb8gng3by55zgp6hghms"; depends=[MeSHDbi]; };
MeSH_Pto_eg_db = derive2 { name="MeSH.Pto.eg.db"; version="1.13.0"; sha256="18x1q7md0zvb233qw1x6qs8k55hjkh1nd1cvizs2vhsbvzfw9yjz"; depends=[MeSHDbi]; };
MeSH_Ptr_eg_db = derive2 { name="MeSH.Ptr.eg.db"; version="1.13.0"; sha256="1fqi308z4psspykj1dkq76v94641wq9mnxwj3yzd9j49c8x45294"; depends=[MeSHDbi]; };
MeSH_Rno_eg_db = derive2 { name="MeSH.Rno.eg.db"; version="1.13.0"; sha256="0kakfkkmvmlk22g1aa86grahfbvk8hainar1760r5j8zrny8dvvr"; depends=[MeSHDbi]; };
MeSH_Sce_S288c_eg_db = derive2 { name="MeSH.Sce.S288c.eg.db"; version="1.13.0"; sha256="09gzlfp958bfkvas0hxaw6r319y02sygmb7ywxvdqj41sxyv63zp"; depends=[MeSHDbi]; };
MeSH_Sco_A32_eg_db = derive2 { name="MeSH.Sco.A32.eg.db"; version="1.13.0"; sha256="0cm3352chz3qaknq0an8gfsk2xbfn0jw5rqss3lrxcq35x1qk21a"; depends=[MeSHDbi]; };
MeSH_Sil_eg_db = derive2 { name="MeSH.Sil.eg.db"; version="1.13.0"; sha256="1hpj2cr8gixqlvfhnqvr5m3m1ngfdrvavqipf38m5cnm1wlqk9ll"; depends=[MeSHDbi]; };
MeSH_Spu_eg_db = derive2 { name="MeSH.Spu.eg.db"; version="1.13.0"; sha256="1ryrr1mr7w6h8xs4f79zmnnv8j4mkjckxjk4npcdiilfb2zg1y3j"; depends=[MeSHDbi]; };
MeSH_Ssc_eg_db = derive2 { name="MeSH.Ssc.eg.db"; version="1.13.0"; sha256="10ygdjx63ajd1vsgrn2f8isvaxdf2p6yg45yqrmjv3zhbvi1aav1"; depends=[MeSHDbi]; };
MeSH_Syn_eg_db = derive2 { name="MeSH.Syn.eg.db"; version="1.13.0"; sha256="153i3ln2m8rb0445hjplnim4h8dvvmf370zglcc5ww9dcx9m93nb"; depends=[MeSHDbi]; };
MeSH_Tbr_9274_eg_db = derive2 { name="MeSH.Tbr.9274.eg.db"; version="1.13.0"; sha256="0sm2sg246w35vfv9dam40x85mdv18fpi5j1k31432chrda867rf0"; depends=[MeSHDbi]; };
MeSH_Tgo_ME49_eg_db = derive2 { name="MeSH.Tgo.ME49.eg.db"; version="1.13.0"; sha256="0xqapk2fkaj719ih818rpb1ciiblw6zr6a83y0xpwrm8y29m3qh5"; depends=[MeSHDbi]; };
MeSH_Tgu_eg_db = derive2 { name="MeSH.Tgu.eg.db"; version="1.13.0"; sha256="0zfrjhrw2jrk6yzkmjnxfqws1a2sylpz1rz2im5n3xnlk6l5d0zn"; depends=[MeSHDbi]; };
MeSH_Vvi_eg_db = derive2 { name="MeSH.Vvi.eg.db"; version="1.13.0"; sha256="0v6g4wqsph3jhxziayijqn63cjp9z4i6jpm5wk431qp9zhr3vw4w"; depends=[MeSHDbi]; };
MeSH_Xla_eg_db = derive2 { name="MeSH.Xla.eg.db"; version="1.13.0"; sha256="1v2blabzcd1vdmc47m9rfknlf4865ppvfx8p2nm9cilrwp29w1pk"; depends=[MeSHDbi]; };
MeSH_Xtr_eg_db = derive2 { name="MeSH.Xtr.eg.db"; version="1.13.0"; sha256="0ymc65z935yzz0dxvrlx1wj40zmd7192jdav3736syhq6jrwmq3d"; depends=[MeSHDbi]; };
MeSH_Zma_eg_db = derive2 { name="MeSH.Zma.eg.db"; version="1.13.0"; sha256="1vnh6y9jr03cmncyka886wq59qnbpk1d3sqryxjd3d3hyhg7jz7b"; depends=[MeSHDbi]; };
MeSH_db = derive2 { name="MeSH.db"; version="1.13.0"; sha256="1fdqzbka0bbpzphr64sjabddr1a7mrk310mzjfrwd6sll54am9q8"; depends=[MeSHDbi]; };
MmAgilentDesign026655_db = derive2 { name="MmAgilentDesign026655.db"; version="3.2.3"; sha256="00d0yjcb5id7zacx4bzdwy4q6f4qvnnx8ph4d4xz1fmcbspz2qiz"; depends=[AnnotationDbi org_Mm_eg_db]; };
MoExExonProbesetLocation = derive2 { name="MoExExonProbesetLocation"; version="1.15.0"; sha256="0bvj3bji4bwwmxjz4b57n1aqypdibdmry30rfwmlxss1hav96sl7"; depends=[AnnotationDbi]; };
Mu15v1_db = derive2 { name="Mu15v1.db"; version="3.2.3"; sha256="0qchqkbx6ybijab8qhflxj33kwksfll1d3d3917vydjac9fzw1lz"; depends=[AnnotationDbi org_Mm_eg_db]; };
@ -256,8 +267,8 @@ in with self; {
Mus_musculus = derive2 { name="Mus.musculus"; version="1.3.1"; sha256="143zdf83gbfqhy8jm9df7gzhw5q3a64jrjrxrzjf0zd76j8s8j6y"; depends=[AnnotationDbi GenomicFeatures GO_db org_Mm_eg_db OrganismDbi TxDb_Mmusculus_UCSC_mm10_knownGene]; };
Norway981_db = derive2 { name="Norway981.db"; version="3.2.3"; sha256="04ngc2hilqi9m7933mnm7jcvkxlz68vqqh5b628db575vcxql9b9"; depends=[AnnotationDbi org_Hs_eg_db]; };
OperonHumanV3_db = derive2 { name="OperonHumanV3.db"; version="3.2.3"; sha256="082gff88cwk2p50q8g9bixggacaclgqcvk6w5dc11h9fkgvd160i"; depends=[AnnotationDbi org_Hs_eg_db]; };
PANTHER_db = derive2 { name="PANTHER.db"; version="1.0.4"; sha256="1vl8anixkhcb9axlszk479yaw48bz1hhgmff41nqk8k8w4jkyn1y"; depends=[AnnotationDbi RSQLite]; };
PFAM_db = derive2 { name="PFAM.db"; version="3.7.0"; sha256="0ih3xz8vk80xzqwgv6ff3rp1a24qhwd1v1frkq1m6d981g7ymdap"; depends=[AnnotationDbi]; };
PANTHER_db = derive2 { name="PANTHER.db"; version="1.0.10"; sha256="1gaq6dnxb83gnlcc544clljgvxwjw98idbq3v6ipqqlx3rdki2xn"; depends=[AnnotationDbi AnnotationHub BiocFileCache RSQLite]; };
PFAM_db = derive2 { name="PFAM.db"; version="3.11.4"; sha256="1wkchf4hz484xld7fxzcmwc8mcbwzn83fz0hamg1mrp3x45djbmx"; depends=[AnnotationDbi]; };
POCRCannotation_db = derive2 { name="POCRCannotation.db"; version="3.2.3"; sha256="0ybvs4hrxpivdkhm0fxpib11vlxqqdk8prlyj78vj5qzyb3iy89d"; depends=[AnnotationDbi org_Hs_eg_db]; };
PartheenMetaData_db = derive2 { name="PartheenMetaData.db"; version="3.2.3"; sha256="0d37c5b7s3fgkkvg7sj7gl9ksrjk5pyyv54vkys8w3qwgsm8yrdz"; depends=[AnnotationDbi org_Hs_eg_db]; };
PolyPhen_Hsapiens_dbSNP131 = derive2 { name="PolyPhen.Hsapiens.dbSNP131"; version="1.0.2"; sha256="1kikygkli41sn3rqihz0924prmqg2264ifj29vmg1a7qccm0kf7c"; depends=[AnnotationDbi RSQLite VariantAnnotation]; };
@ -282,35 +293,41 @@ in with self; {
TxDb_Athaliana_BioMart_plantsmart22 = derive2 { name="TxDb.Athaliana.BioMart.plantsmart22"; version="3.0.1"; sha256="0j2zr4cddad7z1lxx9m9kfgyy7jajjnblpk9j8igd39ia3ixrpzc"; depends=[AnnotationDbi GenomicFeatures]; };
TxDb_Athaliana_BioMart_plantsmart25 = derive2 { name="TxDb.Athaliana.BioMart.plantsmart25"; version="3.1.3"; sha256="0a6v0l6p13zmiysi3k8dxzdlxng552qqj9rnlbdavdiidla0pvm3"; depends=[AnnotationDbi GenomicFeatures]; };
TxDb_Athaliana_BioMart_plantsmart28 = derive2 { name="TxDb.Athaliana.BioMart.plantsmart28"; version="3.2.2"; sha256="1yjyvrbx55y024lqg3b2rlf8pngqw5xi3p83j5ipan05wf0aq6ir"; depends=[AnnotationDbi GenomicFeatures]; };
TxDb_Btaurus_UCSC_bosTau8_refGene = derive2 { name="TxDb.Btaurus.UCSC.bosTau8.refGene"; version="3.4.4"; sha256="18gmx57savyvvdkgnrvmc4xj3xrakybyx4pkfmpabnqy29z6n71q"; depends=[AnnotationDbi GenomicFeatures]; };
TxDb_Celegans_UCSC_ce11_refGene = derive2 { name="TxDb.Celegans.UCSC.ce11.refGene"; version="3.4.4"; sha256="04jcx40z2380x760wbl686zvm780y38kls1js215jhmw7hff8md5"; depends=[AnnotationDbi GenomicFeatures]; };
TxDb_Btaurus_UCSC_bosTau8_refGene = derive2 { name="TxDb.Btaurus.UCSC.bosTau8.refGene"; version="3.11.0"; sha256="1cwdj80yvpp1nv21jpyixlh2d50l201g50f08n6m0dkz6g7cw3v0"; depends=[AnnotationDbi GenomicFeatures]; };
TxDb_Btaurus_UCSC_bosTau9_refGene = derive2 { name="TxDb.Btaurus.UCSC.bosTau9.refGene"; version="3.10.0"; sha256="1v7q9jaaj1n2vabjj6ij6pz0g89nqlyy4y4g65irz6cm5mvik4q9"; depends=[AnnotationDbi GenomicFeatures]; };
TxDb_Celegans_UCSC_ce11_ensGene = derive2 { name="TxDb.Celegans.UCSC.ce11.ensGene"; version="3.11.0"; sha256="1b359pb762xhw64lnj9xfn6v6d4mjfsymmp6y5m1i4rrxiyw26q4"; depends=[AnnotationDbi GenomicFeatures]; };
TxDb_Celegans_UCSC_ce11_refGene = derive2 { name="TxDb.Celegans.UCSC.ce11.refGene"; version="3.4.6"; sha256="1aq4jhn2c67wibq02l8drrjscmicbj6z35d0jksq8mwhz8k30zn6"; depends=[AnnotationDbi GenomicFeatures]; };
TxDb_Celegans_UCSC_ce6_ensGene = derive2 { name="TxDb.Celegans.UCSC.ce6.ensGene"; version="3.2.2"; sha256="1sgppva33cdy4isj2is8mfalj5gmmkpbkq9w1d83a4agcq31mi90"; depends=[AnnotationDbi GenomicFeatures]; };
TxDb_Cfamiliaris_UCSC_canFam3_refGene = derive2 { name="TxDb.Cfamiliaris.UCSC.canFam3.refGene"; version="3.4.4"; sha256="1rl7yc2csc3fs2iri0kkvpjv34jnhkzc0jhh2a3hnyvhv55lzmf0"; depends=[AnnotationDbi GenomicFeatures]; };
TxDb_Cfamiliaris_UCSC_canFam3_refGene = derive2 { name="TxDb.Cfamiliaris.UCSC.canFam3.refGene"; version="3.11.0"; sha256="0rigyddnqxb3dfrj93198j0l8s1flp051xbkmz0b55qp1cyrl5kr"; depends=[AnnotationDbi GenomicFeatures]; };
TxDb_Dmelanogaster_UCSC_dm3_ensGene = derive2 { name="TxDb.Dmelanogaster.UCSC.dm3.ensGene"; version="3.2.2"; sha256="1337x23rdmiiza83ms225kri37h16q5hw1lw0m577abcgip3d7c7"; depends=[AnnotationDbi GenomicFeatures]; };
TxDb_Dmelanogaster_UCSC_dm6_ensGene = derive2 { name="TxDb.Dmelanogaster.UCSC.dm6.ensGene"; version="3.4.4"; sha256="18nwjnkbrvrkk6g5jns3h55874hk92fdbrfyjvvxk4daw0p7gii8"; depends=[AnnotationDbi GenomicFeatures]; };
TxDb_Drerio_UCSC_danRer10_refGene = derive2 { name="TxDb.Drerio.UCSC.danRer10.refGene"; version="3.4.4"; sha256="1ck4ymlxj0fjrbgxzgdqgbyl3z4nqyc6bczw1cgwblmcv52h3cj0"; depends=[AnnotationDbi GenomicFeatures]; };
TxDb_Ggallus_UCSC_galGal4_refGene = derive2 { name="TxDb.Ggallus.UCSC.galGal4.refGene"; version="3.4.4"; sha256="1cxdrdg3pqwi0rfk5bzik05r1hvxwsva862b7cf7pfcf202dkqg5"; depends=[AnnotationDbi GenomicFeatures]; };
TxDb_Ggallus_UCSC_galGal5_refGene = derive2 { name="TxDb.Ggallus.UCSC.galGal5.refGene"; version="3.4.4"; sha256="15laq4kdm85755lk176lqsi2aryi9i85b4c1arrj4qgjkjrbylvq"; depends=[AnnotationDbi GenomicFeatures]; };
TxDb_Dmelanogaster_UCSC_dm6_ensGene = derive2 { name="TxDb.Dmelanogaster.UCSC.dm6.ensGene"; version="3.11.0"; sha256="1gpm060wmlk1dm8s7p61afa0pba70zkamfh63gzcbdai5v74rkzx"; depends=[AnnotationDbi GenomicFeatures]; };
TxDb_Drerio_UCSC_danRer10_refGene = derive2 { name="TxDb.Drerio.UCSC.danRer10.refGene"; version="3.4.6"; sha256="1isd4idvh9flvirrq760cw5lc1nwqjx0q76p9dp01wbbbsb3rfnk"; depends=[AnnotationDbi GenomicFeatures]; };
TxDb_Drerio_UCSC_danRer11_refGene = derive2 { name="TxDb.Drerio.UCSC.danRer11.refGene"; version="3.4.6"; sha256="0p5pr0fq1l9bp019w2214szf78y3nbw0p4819jcnba1v50y3336l"; depends=[AnnotationDbi GenomicFeatures]; };
TxDb_Ggallus_UCSC_galGal4_refGene = derive2 { name="TxDb.Ggallus.UCSC.galGal4.refGene"; version="3.11.0"; sha256="1wxiih08p52bmjh6ywnbndvhz45fdsd1ixx1j7k181a8xd0cw47q"; depends=[AnnotationDbi GenomicFeatures]; };
TxDb_Ggallus_UCSC_galGal5_refGene = derive2 { name="TxDb.Ggallus.UCSC.galGal5.refGene"; version="3.11.0"; sha256="1bvbbw7c96jpzg8rz9gvkq4pf74bz3nj28br747r0wsll5lk398s"; depends=[AnnotationDbi GenomicFeatures]; };
TxDb_Ggallus_UCSC_galGal6_refGene = derive2 { name="TxDb.Ggallus.UCSC.galGal6.refGene"; version="3.10.0"; sha256="0ddibdn6shlhqfmlajnq754z4vad7gi55vb5y8j89nc2k1sc5a3i"; depends=[AnnotationDbi GenomicFeatures]; };
TxDb_Hsapiens_BioMart_igis = derive2 { name="TxDb.Hsapiens.BioMart.igis"; version="2.3.2"; sha256="0590a2hkrpm33hmjg5g0gm6sig3xvc09m0q6lwmafgaajf90h6ky"; depends=[AnnotationDbi GenomicFeatures]; };
TxDb_Hsapiens_UCSC_hg18_knownGene = derive2 { name="TxDb.Hsapiens.UCSC.hg18.knownGene"; version="3.2.2"; sha256="1yk9ggclkqqfzrdp8gcqyplvif824pa7df54ck5gb1xb9q5s975w"; depends=[AnnotationDbi GenomicFeatures]; };
TxDb_Hsapiens_UCSC_hg19_knownGene = derive2 { name="TxDb.Hsapiens.UCSC.hg19.knownGene"; version="3.2.2"; sha256="1sajhcqqwazgz2lqbik7rd935i7kpnh08zxbp2ra10j72yqy4g86"; depends=[AnnotationDbi GenomicFeatures]; };
TxDb_Hsapiens_UCSC_hg19_lincRNAsTranscripts = derive2 { name="TxDb.Hsapiens.UCSC.hg19.lincRNAsTranscripts"; version="3.2.2"; sha256="0bmbp7kydvviczw8axgxq2wdlwq6fdas90jk9bg56avjq5syws2g"; depends=[AnnotationDbi GenomicFeatures]; };
TxDb_Hsapiens_UCSC_hg38_knownGene = derive2 { name="TxDb.Hsapiens.UCSC.hg38.knownGene"; version="3.4.0"; sha256="0i0xw0mcn403r911ijqdnrwg9k5bspdnjibfjvnhxq4h8vcfprn5"; depends=[AnnotationDbi GenomicFeatures]; };
TxDb_Mmulatta_UCSC_rheMac3_refGene = derive2 { name="TxDb.Mmulatta.UCSC.rheMac3.refGene"; version="3.4.4"; sha256="13nv7l71piwf0frnwplwbac82ad7vxbw31yrfnqvnd1knh7ns99x"; depends=[AnnotationDbi GenomicFeatures]; };
TxDb_Mmulatta_UCSC_rheMac8_refGene = derive2 { name="TxDb.Mmulatta.UCSC.rheMac8.refGene"; version="3.4.4"; sha256="1qgm66hnhqb3jyal8s43yri96k1xwb3vamb83894n86bh2g6nlca"; depends=[AnnotationDbi GenomicFeatures]; };
TxDb_Hsapiens_UCSC_hg38_knownGene = derive2 { name="TxDb.Hsapiens.UCSC.hg38.knownGene"; version="3.10.0"; sha256="0lqir16l8wphhpaizmvgmjzk40p90rzgqndgvbms7ickinrpg59s"; depends=[AnnotationDbi GenomicFeatures]; };
TxDb_Mmulatta_UCSC_rheMac10_refGene = derive2 { name="TxDb.Mmulatta.UCSC.rheMac10.refGene"; version="3.10.0"; sha256="1d1gvs6877649zwgja1z5x0mgci2kirbj7pzhb22xyinif3bhz26"; depends=[AnnotationDbi GenomicFeatures]; };
TxDb_Mmulatta_UCSC_rheMac3_refGene = derive2 { name="TxDb.Mmulatta.UCSC.rheMac3.refGene"; version="3.11.0"; sha256="0plhdp4rjc79rq5gm81vb7b2y1hj036mbfafm55ixf2ggahibdqy"; depends=[AnnotationDbi GenomicFeatures]; };
TxDb_Mmulatta_UCSC_rheMac8_refGene = derive2 { name="TxDb.Mmulatta.UCSC.rheMac8.refGene"; version="3.11.0"; sha256="1l6i064s8h9xp0f9n5cjs8n0q4fx1x70mmhzix006l3zicajpc7d"; depends=[AnnotationDbi GenomicFeatures]; };
TxDb_Mmusculus_UCSC_mm10_ensGene = derive2 { name="TxDb.Mmusculus.UCSC.mm10.ensGene"; version="3.4.0"; sha256="0saxi1fdiwd38sfvy1rynd3v44rbp158jv6sjqcivvaqnd84zg9s"; depends=[AnnotationDbi GenomicFeatures]; };
TxDb_Mmusculus_UCSC_mm10_knownGene = derive2 { name="TxDb.Mmusculus.UCSC.mm10.knownGene"; version="3.4.4"; sha256="01lgxc1fx5nhlpbwjd5zqghkkbmh6axd98ikx4b0spv0jdg6gf39"; depends=[AnnotationDbi GenomicFeatures]; };
TxDb_Mmusculus_UCSC_mm10_knownGene = derive2 { name="TxDb.Mmusculus.UCSC.mm10.knownGene"; version="3.10.0"; sha256="0xs9npnhbwll7p62hibs02y4ac23jchdcr25i6a7qwq1kms82qk9"; depends=[AnnotationDbi GenomicFeatures]; };
TxDb_Mmusculus_UCSC_mm9_knownGene = derive2 { name="TxDb.Mmusculus.UCSC.mm9.knownGene"; version="3.2.2"; sha256="16bjxy00363hf91ik2mqlqls86i07gia72qh92xc3l1ncch61mx2"; depends=[AnnotationDbi GenomicFeatures]; };
TxDb_Ptroglodytes_UCSC_panTro4_refGene = derive2 { name="TxDb.Ptroglodytes.UCSC.panTro4.refGene"; version="3.4.4"; sha256="12fdcs4vv4l0d3sksdq76nwwj88f8psiy84rd1jhfw8kbxqrhh8y"; depends=[AnnotationDbi GenomicFeatures]; };
TxDb_Ptroglodytes_UCSC_panTro5_refGene = derive2 { name="TxDb.Ptroglodytes.UCSC.panTro5.refGene"; version="3.4.4"; sha256="00mirzp38iqm0l0py1a7mlslnbmkfzzk1krcg6jdyr8gan2sskpi"; depends=[AnnotationDbi GenomicFeatures]; };
TxDb_Ptroglodytes_UCSC_panTro4_refGene = derive2 { name="TxDb.Ptroglodytes.UCSC.panTro4.refGene"; version="3.11.0"; sha256="0w94r2g1x9zgdbz8mkka41264q3ylf88m3rll594nn0h5g01g0yg"; depends=[AnnotationDbi GenomicFeatures]; };
TxDb_Ptroglodytes_UCSC_panTro5_refGene = derive2 { name="TxDb.Ptroglodytes.UCSC.panTro5.refGene"; version="3.11.0"; sha256="0rmmvwmh9dqvjynka89jkdg8rnmr474adxsivwbpkxj371gyby31"; depends=[AnnotationDbi GenomicFeatures]; };
TxDb_Ptroglodytes_UCSC_panTro6_refGene = derive2 { name="TxDb.Ptroglodytes.UCSC.panTro6.refGene"; version="3.10.0"; sha256="0z4lq7wy48kkxnx29zmrbmrq4qjrj3digwxkw3x54qq80nvzxiza"; depends=[AnnotationDbi GenomicFeatures]; };
TxDb_Rnorvegicus_BioMart_igis = derive2 { name="TxDb.Rnorvegicus.BioMart.igis"; version="2.3.2"; sha256="1099vkk8g3lxbgjxsm1p1m3mjj08nsw282mqxgzpnrxf7m6jll76"; depends=[AnnotationDbi GenomicFeatures]; };
TxDb_Rnorvegicus_UCSC_rn4_ensGene = derive2 { name="TxDb.Rnorvegicus.UCSC.rn4.ensGene"; version="3.2.2"; sha256="0gv8bynfxxa471ap069mjvfrb1d7a0c4w5k8hxkr4hnsm44mschm"; depends=[AnnotationDbi GenomicFeatures]; };
TxDb_Rnorvegicus_UCSC_rn5_refGene = derive2 { name="TxDb.Rnorvegicus.UCSC.rn5.refGene"; version="3.4.4"; sha256="1h9vmsp8lcr8yyvd1mjm81p8l660bjsx2kyhg3wm96izxgd4i7gn"; depends=[AnnotationDbi GenomicFeatures]; };
TxDb_Rnorvegicus_UCSC_rn6_refGene = derive2 { name="TxDb.Rnorvegicus.UCSC.rn6.refGene"; version="3.4.4"; sha256="1k4g78kh52ppr4fd5z4bwzzgw8jg6j3zi129fnny4ks6zkadhlw6"; depends=[AnnotationDbi GenomicFeatures]; };
TxDb_Rnorvegicus_UCSC_rn5_refGene = derive2 { name="TxDb.Rnorvegicus.UCSC.rn5.refGene"; version="3.11.0"; sha256="0hlh3c559m4ny3b5sfdk7f8rardai13p41fx2p9p2chd95s0j3p1"; depends=[AnnotationDbi GenomicFeatures]; };
TxDb_Rnorvegicus_UCSC_rn6_refGene = derive2 { name="TxDb.Rnorvegicus.UCSC.rn6.refGene"; version="3.4.6"; sha256="1piqli0wdq3r289is8lmijnshm8rmx7rphp2qfymlvc0jmvgs9wr"; depends=[AnnotationDbi GenomicFeatures]; };
TxDb_Scerevisiae_UCSC_sacCer2_sgdGene = derive2 { name="TxDb.Scerevisiae.UCSC.sacCer2.sgdGene"; version="3.2.2"; sha256="0l5gcwhbvzx60p9hjhd31angamb0hkgdg2avga7341j77rd5pwza"; depends=[AnnotationDbi GenomicFeatures]; };
TxDb_Scerevisiae_UCSC_sacCer3_sgdGene = derive2 { name="TxDb.Scerevisiae.UCSC.sacCer3.sgdGene"; version="3.2.2"; sha256="1sjwl7fb3l3zxxbk8gkvzxwdsind0xjj7kmh7dachm6fi17hpb3d"; depends=[AnnotationDbi GenomicFeatures]; };
TxDb_Sscrofa_UCSC_susScr11_refGene = derive2 { name="TxDb.Sscrofa.UCSC.susScr11.refGene"; version="3.4.4"; sha256="1c6kbkp6iq6zzpg6wpnbgclp1vsdhh19g220va8b61jhgcccr2c6"; depends=[AnnotationDbi GenomicFeatures]; };
TxDb_Sscrofa_UCSC_susScr3_refGene = derive2 { name="TxDb.Sscrofa.UCSC.susScr3.refGene"; version="3.4.4"; sha256="1yvjwsq9cn9kyjir53n20fbi8nyf1m64zim18w5mv05w9rn86gdl"; depends=[AnnotationDbi GenomicFeatures]; };
TxDb_Sscrofa_UCSC_susScr11_refGene = derive2 { name="TxDb.Sscrofa.UCSC.susScr11.refGene"; version="3.11.0"; sha256="1ikqammkzqdza8948jwdr18mslm59izni690r2lm04lrpmg4c6fh"; depends=[AnnotationDbi GenomicFeatures]; };
TxDb_Sscrofa_UCSC_susScr3_refGene = derive2 { name="TxDb.Sscrofa.UCSC.susScr3.refGene"; version="3.11.0"; sha256="0z1blh92w81mwv674fng5m50gzsy9pxymmy1q773h54k9qlksvy3"; depends=[AnnotationDbi GenomicFeatures]; };
XtraSNPlocs_Hsapiens_dbSNP141_GRCh38 = derive2 { name="XtraSNPlocs.Hsapiens.dbSNP141.GRCh38"; version="0.99.12"; sha256="0a27y0ngg760y5wwcja4dpd7cjd8h5zg1s2b3a1r54s21k65zny3"; depends=[BSgenome GenomeInfoDb GenomicRanges IRanges S4Vectors]; };
XtraSNPlocs_Hsapiens_dbSNP144_GRCh37 = derive2 { name="XtraSNPlocs.Hsapiens.dbSNP144.GRCh37"; version="0.99.12"; sha256="0k823fvqjmdkmd47m7wyra6jxmv8lnk2i1xl4pp0mh3zgb87hgfb"; depends=[BiocGenerics BSgenome GenomeInfoDb GenomicRanges IRanges S4Vectors]; };
XtraSNPlocs_Hsapiens_dbSNP144_GRCh38 = derive2 { name="XtraSNPlocs.Hsapiens.dbSNP144.GRCh38"; version="0.99.12"; sha256="0d4q32ij2x4726wvw06sgmivid0n94vfdmszdyh607xlcahqxa5z"; depends=[BiocGenerics BSgenome GenomeInfoDb GenomicRanges IRanges S4Vectors]; };
@ -320,22 +337,22 @@ in with self; {
agprobe = derive2 { name="agprobe"; version="2.18.0"; sha256="1vnawamcpz16na8nmlq2czfxcr325fwdnngxl65mmnbd0f4lmy3k"; depends=[AnnotationDbi]; };
alternativeSplicingEvents_hg19 = derive2 { name="alternativeSplicingEvents.hg19"; version="1.0.1"; sha256="1v714abdpzhwa450zr66s1yjpxl6lkwi3wjbwn8phn87cgf8rj7q"; depends=[AnnotationHub]; };
alternativeSplicingEvents_hg38 = derive2 { name="alternativeSplicingEvents.hg38"; version="1.0.1"; sha256="0im87mrh1n6kv84q6lm4y15lb93rih88zdpa0jms5az91lyvsf25"; depends=[AnnotationHub]; };
anopheles_db0 = derive2 { name="anopheles.db0"; version="3.7.1"; sha256="0f940ybh7kr30d9pkqhr0w2yrwsqa25yxbhzhlccn4a6a6svzcwb"; depends=[AnnotationDbi]; };
arabidopsis_db0 = derive2 { name="arabidopsis.db0"; version="3.7.1"; sha256="1d7cnhbm44dv0g6mjv76sdr8dgni34fbffzkk95rqikdqag8s9cy"; depends=[AnnotationDbi]; };
anopheles_db0 = derive2 { name="anopheles.db0"; version="3.11.2"; sha256="1f2lzva0w841655fq9f8zvaj00w9h965af2nki1b7258jwal857h"; depends=[AnnotationDbi]; };
arabidopsis_db0 = derive2 { name="arabidopsis.db0"; version="3.11.3"; sha256="1vl28gxqgl48s1aii3r0y984vdic9g8x7y17k85cgv85j45n1dv6"; depends=[AnnotationDbi]; };
ath1121501_db = derive2 { name="ath1121501.db"; version="3.2.3"; sha256="1zrf26cfhlmrb5pyfawwk4v8l1mflx8c43zsxrwkbmxzc1jnc7dv"; depends=[AnnotationDbi org_At_tair_db]; };
ath1121501cdf = derive2 { name="ath1121501cdf"; version="2.18.0"; sha256="1naq8f8dwgbmndx178nm2pw6hjx5ljx0w1wb4dfjifnl4bs5rqcc"; depends=[AnnotationDbi]; };
ath1121501probe = derive2 { name="ath1121501probe"; version="2.18.0"; sha256="0a2nd8zhp3ybis780l3rrmwcxskbl3a111g8w6m8qfwsw5vnlqg1"; depends=[AnnotationDbi]; };
barley1cdf = derive2 { name="barley1cdf"; version="2.18.0"; sha256="0rbij5cqr2sz33y5waybv85nrcgf70iwj5gk13g0xn9p1l1zxyn2"; depends=[AnnotationDbi]; };
barley1probe = derive2 { name="barley1probe"; version="2.18.0"; sha256="1kh5r748b4vkmvlfaclmrh07ypbrzgxn90liqfz1rwkabh6rfk71"; depends=[AnnotationDbi]; };
bovine_db = derive2 { name="bovine.db"; version="3.2.3"; sha256="1i8mgk60hlmvngb4c727wajix9mca9gfg0pzxrnfcjwi87rpw7fy"; depends=[AnnotationDbi org_Bt_eg_db]; };
bovine_db0 = derive2 { name="bovine.db0"; version="3.7.1"; sha256="17q8hkfips8znwnkk062m8xsvcpaf6ynpf2jjszrcm02495vbw45"; depends=[AnnotationDbi]; };
bovine_db0 = derive2 { name="bovine.db0"; version="3.11.2"; sha256="17kgw3nps8gh2i2wh10wz1zjzgz5sz5vyf28y3s206jnpsnmglss"; depends=[AnnotationDbi]; };
bovinecdf = derive2 { name="bovinecdf"; version="2.18.0"; sha256="13mf0yy0dypkm5n2ghl04xm6ayb9bn9qijqhgynksghi7s2k34mb"; depends=[AnnotationDbi]; };
bovineprobe = derive2 { name="bovineprobe"; version="2.18.0"; sha256="0i4afa5dksnir2nfrfh2cynjm59sm6vfaqa9wyag8cxg7c2nlm1i"; depends=[AnnotationDbi]; };
bsubtiliscdf = derive2 { name="bsubtiliscdf"; version="2.18.0"; sha256="1rihrjim37b49rhqr4nxga8sp67qri9xqlqc141mhbngh6cw3iyl"; depends=[AnnotationDbi]; };
bsubtilisprobe = derive2 { name="bsubtilisprobe"; version="2.18.0"; sha256="0k99hvgaswn96x4yanvr9cy8bdy69sd5q7yp6dj9synxj7s1fcw9"; depends=[AnnotationDbi]; };
cMAP = derive2 { name="cMAP"; version="1.15.1"; sha256="0pzizm27rgcaic7wsh52z30v1jwarmz4cwh1mksbygp63k54mwiv"; depends=[]; };
canine_db = derive2 { name="canine.db"; version="3.2.3"; sha256="0wbyzhk827l49yxzimvznx9z6yag5nd4djm2hddysf5nk1ndapqs"; depends=[AnnotationDbi org_Cf_eg_db]; };
canine_db0 = derive2 { name="canine.db0"; version="3.7.1"; sha256="1z691m0ap7x5sb7pbxlk8cs5s6hwvgvdbjjdxlfp8vilciwrsgwn"; depends=[AnnotationDbi]; };
canine_db0 = derive2 { name="canine.db0"; version="3.11.2"; sha256="1rlhpfj7gapjbzcya0k1cdiysxmp6r3wy1vh55j01z9v4k4lfqk9"; depends=[AnnotationDbi]; };
canine2_db = derive2 { name="canine2.db"; version="3.2.3"; sha256="1gzd2x23dkfiwnwqz9pdn5lp4l8aby525mhscn3xakw633si4dvz"; depends=[AnnotationDbi org_Cf_eg_db]; };
canine2cdf = derive2 { name="canine2cdf"; version="2.18.0"; sha256="077cmmnhjdk0vxjzm1kqf3q5kgx6chwkm59dr4s5dy019rqb6sqr"; depends=[AnnotationDbi]; };
canine2probe = derive2 { name="canine2probe"; version="2.18.0"; sha256="1l849a1dqy4kpcsxs0lvb48ag81i0f0ys0w4757rw4kp8ry59z4b"; depends=[AnnotationDbi]; };
@ -345,10 +362,10 @@ in with self; {
celeganscdf = derive2 { name="celeganscdf"; version="2.18.0"; sha256="0a6w0a48azg0i21j3aqb7fnxck3ff9w3gsi89bnlfh0zx6pknx7p"; depends=[AnnotationDbi]; };
celegansprobe = derive2 { name="celegansprobe"; version="2.18.0"; sha256="05k7si3f8pzkyb8jv0r2vkavbrqxsn4nawl92gcphfsylrwcddqb"; depends=[AnnotationDbi]; };
chicken_db = derive2 { name="chicken.db"; version="3.2.3"; sha256="1rq9afkpcpv8qi75shvnsw8di3ycai4ylv7jq9zwj51zlwlw9cpq"; depends=[AnnotationDbi org_Gg_eg_db]; };
chicken_db0 = derive2 { name="chicken.db0"; version="3.7.1"; sha256="0jib8pamnqzppk2x1i8c7szrwvhhilsxbk2x83ajzbzk3df3rvnd"; depends=[AnnotationDbi]; };
chicken_db0 = derive2 { name="chicken.db0"; version="3.11.2"; sha256="0xgj8fjcdv6xswg6y4m5lqh01s1scinijcxvmibl6sw1c3xn7g3v"; depends=[AnnotationDbi]; };
chickencdf = derive2 { name="chickencdf"; version="2.18.0"; sha256="09hhim5s9xj7n2b5rhn1svf5qly2mn0rr2v2ls25hfzyrqcbxlz1"; depends=[AnnotationDbi]; };
chickenprobe = derive2 { name="chickenprobe"; version="2.18.0"; sha256="1fdsiwfyg7fwslrr7xs3gny7sw24bzg5k1fvlyzb1477sgj0pid3"; depends=[AnnotationDbi]; };
chimp_db0 = derive2 { name="chimp.db0"; version="3.7.1"; sha256="0bgn2yjj1jg0dswn5m4n78lydlzz7qb8fxpm8pl7909xrkcd1lpw"; depends=[AnnotationDbi]; };
chimp_db0 = derive2 { name="chimp.db0"; version="3.11.2"; sha256="01lhhzmqiv5yjnnc4msiqxwx2nbg19j6dbgvph4l69a75yfs2fg7"; depends=[AnnotationDbi]; };
citruscdf = derive2 { name="citruscdf"; version="2.18.0"; sha256="1326mj1xf3k4v5iyyn46whx24qfng0x3cv6rvckdr1ycc1v887dn"; depends=[AnnotationDbi]; };
citrusprobe = derive2 { name="citrusprobe"; version="2.18.0"; sha256="0bf1wic136cxwgs4j13wsyqasnyvr0jw1hzg6qizndmy7g8hrb87"; depends=[AnnotationDbi]; };
clariomdhumanprobeset_db = derive2 { name="clariomdhumanprobeset.db"; version="8.7.0"; sha256="039bsywnim0nr8b3w6vkj4m20j0pggnm6ajjz24bnlikm9zzrs6l"; depends=[AnnotationDbi org_Hs_eg_db]; };
@ -371,14 +388,14 @@ in with self; {
ecoli2_db = derive2 { name="ecoli2.db"; version="3.2.3"; sha256="07vc5fl2zq2f65ndcldyzvwfpl65snp6ygvw658j4036lbb7cpjl"; depends=[AnnotationDbi org_EcK12_eg_db]; };
ecoli2cdf = derive2 { name="ecoli2cdf"; version="2.18.0"; sha256="1rkxrwadq9kg9685z9pg6rgc4bblkx5p3c6snsl4gv2k188dva9r"; depends=[AnnotationDbi]; };
ecoli2probe = derive2 { name="ecoli2probe"; version="2.18.0"; sha256="11q4ka0ncjapahic49xdl9919vm9frrwlqgj101krgkg262lfm8n"; depends=[AnnotationDbi]; };
ecoliK12_db0 = derive2 { name="ecoliK12.db0"; version="3.7.1"; sha256="075ngixclxh1qqgn5p1afxyx8610rfxj1ax3iqmbvqqlyq9nc9ar"; depends=[AnnotationDbi]; };
ecoliSakai_db0 = derive2 { name="ecoliSakai.db0"; version="3.7.1"; sha256="1p3lvf92l44kqn47jhgwd6nqnjl0ksnvmsj1052lrbalh5xl3rcd"; depends=[AnnotationDbi]; };
ecoliK12_db0 = derive2 { name="ecoliK12.db0"; version="3.11.2"; sha256="0rnnjh16grl9d9jsfhm6vi6898aziwvr56rp6zc7yzz913hkgwkj"; depends=[AnnotationDbi]; };
ecoliSakai_db0 = derive2 { name="ecoliSakai.db0"; version="3.11.2"; sha256="0naxgp5q6di565rpp5k04lfv6p2vw9ski7m75f2nk0ksdlpywx9f"; depends=[AnnotationDbi]; };
ecoliasv2cdf = derive2 { name="ecoliasv2cdf"; version="2.18.0"; sha256="16i6has9qgmzakcy24racc1h9j331wndv5c87qp5r1zrai61zyav"; depends=[AnnotationDbi]; };
ecoliasv2probe = derive2 { name="ecoliasv2probe"; version="2.18.0"; sha256="1hfrnal170cdigc2fmnynb75jjsiq77p4x6ws9gah558hvx87nk3"; depends=[AnnotationDbi]; };
ecolicdf = derive2 { name="ecolicdf"; version="2.18.0"; sha256="18g5prjykn356k35m131ifn128k5mhij2x26balqav0azigzjqsn"; depends=[AnnotationDbi]; };
ecoliprobe = derive2 { name="ecoliprobe"; version="2.18.0"; sha256="17g5zxfzsak7a0w51irc0w1w2i5ngdkx9db6rhv1fyp8mfjgaphd"; depends=[AnnotationDbi]; };
fitCons_UCSC_hg19 = derive2 { name="fitCons.UCSC.hg19"; version="3.7.1"; sha256="19isa4x8js0pdb4k8a11bw3bzmzv6jc4jphzrvav7piqkvrgykzx"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; };
fly_db0 = derive2 { name="fly.db0"; version="3.7.1"; sha256="0l617pksrcgb96bm25qsxlyjz7jp7hqk1sfba516l2gd2rvbp7rs"; depends=[AnnotationDbi]; };
fly_db0 = derive2 { name="fly.db0"; version="3.11.2"; sha256="19323k5pd5xa9m8cqykyig0gzwlk5wcssi1k8drbvl8f2jz384bn"; depends=[AnnotationDbi]; };
geneplast_data_string_v91 = derive2 { name="geneplast.data.string.v91"; version="0.99.6"; sha256="0mc26d0sgmpmfmqsqinqv5k6vhg0hlc8hsjkcnvf369yav224nq1"; depends=[]; };
genomewidesnp5Crlmm = derive2 { name="genomewidesnp5Crlmm"; version="1.0.6"; sha256="06dmwnjy3gb53y6nr02dmp22qzfl5d63wppazrabcqbzwimhnvp8"; depends=[]; };
genomewidesnp6Crlmm = derive2 { name="genomewidesnp6Crlmm"; version="1.0.7"; sha256="16qcxa32fmbdcv5dck0grsnqyfcqql7wpxa1l6andv9hrvabv2jx"; depends=[]; };
@ -445,14 +462,15 @@ in with self; {
hguqiagenv3_db = derive2 { name="hguqiagenv3.db"; version="3.2.3"; sha256="1ylji60m2zb8ialbl5wdrxy425sriq17z3bg8ikvc5b5gjsw6l7w"; depends=[AnnotationDbi org_Hs_eg_db]; };
hi16cod_db = derive2 { name="hi16cod.db"; version="3.4.0"; sha256="0ydi0jljx8igzrqaspr9yywv43h2zimm9fk7xc55nm6mnp5jl7kl"; depends=[AnnotationDbi org_Hs_eg_db]; };
hivprtplus2cdf = derive2 { name="hivprtplus2cdf"; version="2.18.0"; sha256="1jv4qzajikz7x4vq87wzn7hf6hx9r4c2gkjhfp93kqzwzddmigf4"; depends=[AnnotationDbi]; };
hom_At_inp_db = derive2 { name="hom.At.inp.db"; version="3.1.2"; sha256="1ka9ssjfxml9sz9k83bs6icbkkyz581svh0pwpvpifzg79qapzwi"; depends=[AnnotationDbi]; };
hom_Ce_inp_db = derive2 { name="hom.Ce.inp.db"; version="3.1.2"; sha256="1iw2xy8yfx1khxy4fkilfq6ms0m9l4q8lz4y0y50fvsh8iiygy98"; depends=[AnnotationDbi]; };
hom_Dm_inp_db = derive2 { name="hom.Dm.inp.db"; version="3.1.2"; sha256="0akg9ay7rgb3j5ckjmv4q9gvnnfhyfaad1phfr1j8zmkdr50x4kw"; depends=[AnnotationDbi]; };
hom_Dr_inp_db = derive2 { name="hom.Dr.inp.db"; version="3.1.2"; sha256="1x4iikf8b5awmg1m9x9wn2fzwsqq93l8yibrkc4r7x7dvm005yg7"; depends=[AnnotationDbi]; };
hom_Hs_inp_db = derive2 { name="hom.Hs.inp.db"; version="3.1.2"; sha256="0fixdcc80a3vb735pqafzva5cw02ygkf5pfy1ncws3f84s3p3zld"; depends=[AnnotationDbi]; };
hom_Mm_inp_db = derive2 { name="hom.Mm.inp.db"; version="3.1.2"; sha256="034b9wiis7w7zj3647s0fh1jspyfn654yf0lm5ymp65sww965cxh"; depends=[AnnotationDbi]; };
hom_Rn_inp_db = derive2 { name="hom.Rn.inp.db"; version="3.1.2"; sha256="02smfm88y72dgmj2kna9v7sbcg5dxr8b4sqgy6i8b3zw3a6776yp"; depends=[AnnotationDbi]; };
hom_Sc_inp_db = derive2 { name="hom.Sc.inp.db"; version="3.1.2"; sha256="0l9nly3k7jnf6g1qnwyw22ga1hdyjdvn3hrlway8pb9rv7279bil"; depends=[AnnotationDbi]; };
hom_At_inp_db = derive2 { name="hom.At.inp.db"; version="3.1.3"; sha256="1mb5qa01w773rz8jnpalpxb4bzk0143pxm9za1np5lbfzgw7gqrz"; depends=[AnnotationDbi]; };
hom_Ce_inp_db = derive2 { name="hom.Ce.inp.db"; version="3.1.3"; sha256="1nqgb8b27rx7avnq42fqmcs1pi3dvbmf93z797sgsrcj8gpm69r7"; depends=[AnnotationDbi]; };
hom_Dm_inp_db = derive2 { name="hom.Dm.inp.db"; version="3.1.3"; sha256="0af9nvs8x1rc30lx2b3099n42waxylchhpzv4a3xgsrrs6q84z5m"; depends=[AnnotationDbi]; };
hom_Dr_inp_db = derive2 { name="hom.Dr.inp.db"; version="3.1.3"; sha256="1qvnqfdlw5ikhpmihmwi8a8nwmsrgbp8rymrnaxi5xqj9rqlm7qd"; depends=[AnnotationDbi]; };
hom_Hs_inp_db = derive2 { name="hom.Hs.inp.db"; version="3.1.3"; sha256="11k8wi40m3ppwbjak7b7yv7flr274fxpx7c8b50l1zxm01dppydz"; depends=[AnnotationDbi]; };
hom_Mm_inp_db = derive2 { name="hom.Mm.inp.db"; version="3.1.3"; sha256="0kdgyzriyg4r19dbcvwvjcd0ziyf1l2ny8sdka7v9lnaga6pq4kn"; depends=[AnnotationDbi]; };
hom_Rn_inp_db = derive2 { name="hom.Rn.inp.db"; version="3.1.3"; sha256="00cdcfvncqw1ldq7pr2bymy5zhmxclv7xgi0kvkhhw0i263619yc"; depends=[AnnotationDbi]; };
hom_Sc_inp_db = derive2 { name="hom.Sc.inp.db"; version="3.1.3"; sha256="1v97yb19a1rl7n81q852snwrgf8spjwas74chnv87r6h355yg1n4"; depends=[AnnotationDbi]; };
hpAnnot = derive2 { name="hpAnnot"; version="1.0.1"; sha256="16isg9byqc9ghipg7626mrijcs0bngz6n6hxz3m616v21cjyingj"; depends=[]; };
hs25kresogen_db = derive2 { name="hs25kresogen.db"; version="2.5.0"; sha256="1yp25ifm3bwzkzm8vimlxw5slini7drhvmh5ggh0z80sfrjyndyf"; depends=[AnnotationDbi org_Hs_eg_db]; };
hspeccdf = derive2 { name="hspeccdf"; version="0.99.1"; sha256="07azl9zpg552ic7li14p6n09ba3jbqqclwffjfpd2vc249x0n4fw"; depends=[AnnotationDbi]; };
hta20probeset_db = derive2 { name="hta20probeset.db"; version="8.7.0"; sha256="12m58w0av2b806w75df7spg72d0v7mr7vlhsgdc9h221r0g06vgx"; depends=[AnnotationDbi org_Hs_eg_db]; };
@ -509,7 +527,7 @@ in with self; {
hugene20sttranscriptcluster_db = derive2 { name="hugene20sttranscriptcluster.db"; version="8.7.0"; sha256="0ba3yvizj9ya61rr9ik2hdxhy0q67908x16n58jjjfq8wf96h7sp"; depends=[AnnotationDbi org_Hs_eg_db]; };
hugene21stprobeset_db = derive2 { name="hugene21stprobeset.db"; version="8.7.0"; sha256="0chkxxpfl696qqiai3i30ylpsihyicbs0hbcni6nmnhfz9k5800g"; depends=[AnnotationDbi org_Hs_eg_db]; };
hugene21sttranscriptcluster_db = derive2 { name="hugene21sttranscriptcluster.db"; version="8.7.0"; sha256="0wk2lg74zkgxh6frmikhk4bxndiyvc1j7mhvz65w8fxfqiwfyf5i"; depends=[AnnotationDbi org_Hs_eg_db]; };
human_db0 = derive2 { name="human.db0"; version="3.7.1"; sha256="1vikw70n828prccs1vlnw3f4rwp5lsp5cb02f56hih4n3mapky9f"; depends=[AnnotationDbi]; };
human_db0 = derive2 { name="human.db0"; version="3.11.2"; sha256="1219w285fjpws76bv8q1a6c9qv8rkfyaqqfnx0vgf0nds75msc5y"; depends=[AnnotationDbi]; };
human1mduov3bCrlmm = derive2 { name="human1mduov3bCrlmm"; version="1.0.4"; sha256="1p7qpzk6svafgdafljhh4k0z7pcs78qmwwfd80r0a1yhkssmp0v9"; depends=[]; };
human1mv1cCrlmm = derive2 { name="human1mv1cCrlmm"; version="1.0.3"; sha256="1qlph3qrjv52ddzlj8pwa93zzh70x4mbdrdr7q9pan427lpck9gx"; depends=[]; };
human370quadv3cCrlmm = derive2 { name="human370quadv3cCrlmm"; version="1.0.3"; sha256="1chjx9vsmqz2whslw1l7jn7nfn7zx6pcjfmqqm9mh81i74rzrdik"; depends=[]; };
@ -547,7 +565,7 @@ in with self; {
m20kcod_db = derive2 { name="m20kcod.db"; version="3.4.0"; sha256="1p2sm5j4b50iqzwcb984qrh74c3hf6yml7b8mvxlhhhvxz4iy1np"; depends=[AnnotationDbi org_Mm_eg_db]; };
maizecdf = derive2 { name="maizecdf"; version="2.18.0"; sha256="0yfz5gjhsq4wz6j63s1b1hxjz03gsmrlfs2cdc8smq6azp3zdid4"; depends=[AnnotationDbi]; };
maizeprobe = derive2 { name="maizeprobe"; version="2.18.0"; sha256="01h5dv5i0zaqlphkii9ipxy9wswv1srgprrpr5vmi01c9d98qsk0"; depends=[AnnotationDbi]; };
malaria_db0 = derive2 { name="malaria.db0"; version="3.7.1"; sha256="1ljk5xfshp96pibw9k1yb5cl664iashb9rhc1y1bjalyidraznk7"; depends=[AnnotationDbi]; };
malaria_db0 = derive2 { name="malaria.db0"; version="3.11.2"; sha256="01825x7r26a6gp8lhd239gdrg8jxnfsl5cdffj1z0d03s4wbjnv0"; depends=[AnnotationDbi]; };
medicagocdf = derive2 { name="medicagocdf"; version="2.18.0"; sha256="1clz679cc887x98c6jk93cphijkbg5r2nd9idrj5901yvh6p9n5q"; depends=[AnnotationDbi]; };
medicagoprobe = derive2 { name="medicagoprobe"; version="2.18.0"; sha256="0w6j1pfkvb3npc8srpjifq2ywnqxhc9q090jqzmkx22x36cw9cl5"; depends=[AnnotationDbi]; };
mgu74a_db = derive2 { name="mgu74a.db"; version="3.2.3"; sha256="0xd2gbvry061409kiwq99i13641g8x6m9kbgg4yr0x6m9dh7hxa8"; depends=[AnnotationDbi org_Mm_eg_db]; };
@ -601,7 +619,7 @@ in with self; {
mogene20sttranscriptcluster_db = derive2 { name="mogene20sttranscriptcluster.db"; version="8.7.0"; sha256="1s7cdjglrc9qqf3gsmhsyycfa0h5qrbk28i4z3z4mb9g6242r1r4"; depends=[AnnotationDbi org_Mm_eg_db]; };
mogene21stprobeset_db = derive2 { name="mogene21stprobeset.db"; version="8.7.0"; sha256="0l8y2zbhykzqs9hbjhj1cys1mzdjhmi4rjv4l3v0sv5969h6sl96"; depends=[AnnotationDbi org_Mm_eg_db]; };
mogene21sttranscriptcluster_db = derive2 { name="mogene21sttranscriptcluster.db"; version="8.7.0"; sha256="1mkw3997mqr7ssa60zpwhlyajda51smcrnlnxwif78g99yj0nrxb"; depends=[AnnotationDbi org_Mm_eg_db]; };
mouse_db0 = derive2 { name="mouse.db0"; version="3.7.1"; sha256="1fyawqxf1m6cnl6p41q1bqb75k59n8ixn3kw8gf4kq34cldl0h9k"; depends=[AnnotationDbi]; };
mouse_db0 = derive2 { name="mouse.db0"; version="3.11.2"; sha256="0cwacdipbw6j1nxwjgjryqw81vwixcgnrymhva498g22nid8j3vk"; depends=[AnnotationDbi]; };
mouse4302_db = derive2 { name="mouse4302.db"; version="3.2.3"; sha256="1wdgqawqzkr39xwl32cap4ksr59p7r7i83g82h1ss4q3lm58gxpm"; depends=[AnnotationDbi org_Mm_eg_db]; };
mouse4302cdf = derive2 { name="mouse4302cdf"; version="2.18.0"; sha256="1mpyma4x8zfs2fmmx57xw4cfs2cf9lhw71nc3icl72d7vmwidswc"; depends=[AnnotationDbi]; };
mouse4302frmavecs = derive2 { name="mouse4302frmavecs"; version="1.5.0"; sha256="04clwkfz1gqqwrnqbavkka3hv480w6vi6c4q947qqnhw8j5jjp7s"; depends=[]; };
@ -638,25 +656,26 @@ in with self; {
nugomm1a520177cdf = derive2 { name="nugomm1a520177cdf"; version="3.4.0"; sha256="0skd5b76si0vydzk5qhg4f1a1j655alxflm9sqci8fi8safwj96a"; depends=[AnnotationDbi]; };
nugomm1a520177probe = derive2 { name="nugomm1a520177probe"; version="3.4.0"; sha256="1n70k0mhv146983myjgk1cgkr9rmmcpqdv8wpkcr320qcvgf9bn7"; depends=[AnnotationDbi]; };
oligoData = derive2 { name="oligoData"; version="1.8.0"; sha256="1d1yfms3jv2c4s255xnh8yxwijrj35skw3nxds7l46y88lg3qn8y"; depends=[oligo]; };
org_Ag_eg_db = derive2 { name="org.Ag.eg.db"; version="3.7.0"; sha256="101xvx62y1y2kbiv9j427879zhjindm1hzb9iscinmf10lwhyj8q"; depends=[AnnotationDbi]; };
org_At_tair_db = derive2 { name="org.At.tair.db"; version="3.7.0"; sha256="0i5dv4lc8dh27ipf37wk84y75fmnbja0bbllzbchb459c9bpwcf9"; depends=[AnnotationDbi]; };
org_Bt_eg_db = derive2 { name="org.Bt.eg.db"; version="3.7.0"; sha256="0vdfgh2yrawz8bbszgxl5vvq6iqvn25p5l01j7zhlmx035jcbfak"; depends=[AnnotationDbi]; };
org_Ce_eg_db = derive2 { name="org.Ce.eg.db"; version="3.7.0"; sha256="1w5br1ss4ha8wv4v2saj7cmbjc2jw0dyj2f2y269l078z31wcnaz"; depends=[AnnotationDbi]; };
org_Cf_eg_db = derive2 { name="org.Cf.eg.db"; version="3.7.0"; sha256="1y3kda375f327bv31cfp470546hvcdw5a8bl3z5h1dm6c556z7cl"; depends=[AnnotationDbi]; };
org_Dm_eg_db = derive2 { name="org.Dm.eg.db"; version="3.7.0"; sha256="1pqjrzlyg72bjpy8zsxvaglc7jsv176bnyi87xdajmkvsgxpm7b3"; depends=[AnnotationDbi]; };
org_Dr_eg_db = derive2 { name="org.Dr.eg.db"; version="3.7.0"; sha256="1xs5wsbcpy0iwbjyiv7fax57djqc529ai5fk1qfsdcvlja3cpglx"; depends=[AnnotationDbi]; };
org_EcK12_eg_db = derive2 { name="org.EcK12.eg.db"; version="3.7.0"; sha256="0ii3k9b0rr6bkb16m108if9liinw7md4mgh8fz4yd4gh8a7zcli7"; depends=[AnnotationDbi]; };
org_EcSakai_eg_db = derive2 { name="org.EcSakai.eg.db"; version="3.7.0"; sha256="1zcqbr4sds24mcggg71g4j6v0wp7fri75d1l0bhp0x245b9k5vnw"; depends=[AnnotationDbi]; };
org_Gg_eg_db = derive2 { name="org.Gg.eg.db"; version="3.7.0"; sha256="0lyzznrnyyw9lsdp58a0sc5jw2lrccsv44dvrza2ix8mx46gplis"; depends=[AnnotationDbi]; };
org_Hs_eg_db = derive2 { name="org.Hs.eg.db"; version="3.7.0"; sha256="1qxz9l80yg3qdqszs6dsscp7lrpfi1bgd0pxh9j7q34vprzwhdim"; depends=[AnnotationDbi]; };
org_Mm_eg_db = derive2 { name="org.Mm.eg.db"; version="3.7.0"; sha256="1i3nvrd3wjigf1rmgxq1p5xxc3p8v02h5gwi62s30rkrsyjjfjxx"; depends=[AnnotationDbi]; };
org_Mmu_eg_db = derive2 { name="org.Mmu.eg.db"; version="3.7.0"; sha256="1c6mwknyf8cq824qm3cax0a2l3wd2h9dw6pylhwm0x7viz2xf2iz"; depends=[AnnotationDbi]; };
org_Pf_plasmo_db = derive2 { name="org.Pf.plasmo.db"; version="3.7.0"; sha256="0s3ibaqvjw3sg1j22pfgzw1gcb9pv9b8a4livj9ph73jqhx03r5i"; depends=[AnnotationDbi]; };
org_Pt_eg_db = derive2 { name="org.Pt.eg.db"; version="3.7.0"; sha256="1n9qd34gjkjgbbz07h6ibzgbq9id81z6ni01vmaki3554gmfk3dl"; depends=[AnnotationDbi]; };
org_Rn_eg_db = derive2 { name="org.Rn.eg.db"; version="3.7.0"; sha256="10293py12jar1ab3s1b872c5gxpw9d2d5sxk4iq5g38i0gcf5gsc"; depends=[AnnotationDbi]; };
org_Sc_sgd_db = derive2 { name="org.Sc.sgd.db"; version="3.7.0"; sha256="0dwaw9v4c1d5wr6skaf97s013wqwqm31bybhggm1fm59aa6mkdwv"; depends=[AnnotationDbi]; };
org_Ss_eg_db = derive2 { name="org.Ss.eg.db"; version="3.7.0"; sha256="1s5zizma3ba00z8q1k9h4fajxwj3f2jg1034rfwqlhsscwrhv5ih"; depends=[AnnotationDbi]; };
org_Xl_eg_db = derive2 { name="org.Xl.eg.db"; version="3.7.0"; sha256="002i6aacrirvyzi14r26fgr6cqc0bfwn0wg83sbligp2dwqm0bb4"; depends=[AnnotationDbi]; };
org_Ag_eg_db = derive2 { name="org.Ag.eg.db"; version="3.11.4"; sha256="1nl54mxhfggbsyd05jz6pn7g9arb6ikv05dibhwba3vhf57kny8i"; depends=[AnnotationDbi]; };
org_At_tair_db = derive2 { name="org.At.tair.db"; version="3.11.4"; sha256="1yhrnssmdjlh3hgiqii4j0bnvpp9bs1z9vi1qm7v2cj820pn7mck"; depends=[AnnotationDbi]; };
org_Bt_eg_db = derive2 { name="org.Bt.eg.db"; version="3.11.4"; sha256="1ypfb1ny0s23mz8958cvbglf4dgqackw4ljw3zhx5nb4ad3r2r5i"; depends=[AnnotationDbi]; };
org_Ce_eg_db = derive2 { name="org.Ce.eg.db"; version="3.11.4"; sha256="1ay2sv4hbiw2g7qy9m1pmpb8n9xhfjj7y9sdcf5sii8j7yjk8yy0"; depends=[AnnotationDbi]; };
org_Cf_eg_db = derive2 { name="org.Cf.eg.db"; version="3.11.4"; sha256="1z43kn96mq8km31ihcjhswnd67v31f2v0ksb65vhhhc3qxfgxs6c"; depends=[AnnotationDbi]; };
org_Dm_eg_db = derive2 { name="org.Dm.eg.db"; version="3.11.4"; sha256="0sn75clknjpii8h2lw9nn7psswcxn5g3gy1kqafbgsy9bp63zycc"; depends=[AnnotationDbi]; };
org_Dr_eg_db = derive2 { name="org.Dr.eg.db"; version="3.11.4"; sha256="0s1gp827h1m99xwmr372d846gaw3y2dwa2hdarp63621jyyh6d8z"; depends=[AnnotationDbi]; };
org_EcK12_eg_db = derive2 { name="org.EcK12.eg.db"; version="3.11.4"; sha256="0gx64w3fwf8h3mdnfwhsfylf12lp4iam4mhlr3mcc81dwgzf67dr"; depends=[AnnotationDbi]; };
org_EcSakai_eg_db = derive2 { name="org.EcSakai.eg.db"; version="3.11.4"; sha256="1nri5cxi619iblhczz637crgarqxncvap2672fgb8snwrzqvdsrp"; depends=[AnnotationDbi]; };
org_Gg_eg_db = derive2 { name="org.Gg.eg.db"; version="3.11.4"; sha256="1p8bid5nqr9ihl1cyq1i8chpwx5mvdx7610qjwj7in22l2ribbi4"; depends=[AnnotationDbi]; };
org_Hs_eg_db = derive2 { name="org.Hs.eg.db"; version="3.11.4"; sha256="0mg2098sss1d2gwdx72qssc5xpl4p7smfdry508hfpm4f1dr91k0"; depends=[AnnotationDbi]; };
org_Mm_eg_db = derive2 { name="org.Mm.eg.db"; version="3.11.4"; sha256="1sss35risk2gzb5yn3j4x2dz4pl98mw0z131a0p1318a0srspihj"; depends=[AnnotationDbi]; };
org_Mmu_eg_db = derive2 { name="org.Mmu.eg.db"; version="3.11.4"; sha256="0z4mddwixk4dwb3jp31knqyxg50vcnp1wch6d5mzblg6jmwbc4w7"; depends=[AnnotationDbi]; };
org_Mxanthus_db = derive2 { name="org.Mxanthus.db"; version="1.0.27"; sha256="1jqwsdjz1d8fwqhq26lavb2kq739ddlb8khsh4b096vhnwv3dxg5"; depends=[AnnotationDbi AnnotationHub BiocFileCache BiocStyle]; };
org_Pf_plasmo_db = derive2 { name="org.Pf.plasmo.db"; version="3.11.4"; sha256="1bp2bp4b2kmfia7wvr4gjncwc2n5ya0y2wv5p6lad6c7yz4f67c3"; depends=[AnnotationDbi]; };
org_Pt_eg_db = derive2 { name="org.Pt.eg.db"; version="3.11.4"; sha256="1xhzdkbml9l5qnmhkfn5kfbjqn5fqjhnh14z8ldy4c7v3cwxdid0"; depends=[AnnotationDbi]; };
org_Rn_eg_db = derive2 { name="org.Rn.eg.db"; version="3.11.4"; sha256="0bp46dc5md7vw9j0y2cim6zlvwkgcbhaiqxl89d6xalj0q9wjqmn"; depends=[AnnotationDbi]; };
org_Sc_sgd_db = derive2 { name="org.Sc.sgd.db"; version="3.11.4"; sha256="0cj5050n86nw85p0h960qnhq82a94xs14zf67k3qwqqv49x8hvaz"; depends=[AnnotationDbi]; };
org_Ss_eg_db = derive2 { name="org.Ss.eg.db"; version="3.11.4"; sha256="02k6gg9537d7nmb9pjmz6ss82j9nbmiamckaynv002vlkkxg9lps"; depends=[AnnotationDbi]; };
org_Xl_eg_db = derive2 { name="org.Xl.eg.db"; version="3.11.4"; sha256="0qjf6zv00k0ial9c3vszb4nf6i11qqjmg9njfp9rkla9c73pihwf"; depends=[AnnotationDbi]; };
paeg1acdf = derive2 { name="paeg1acdf"; version="2.18.0"; sha256="127pgxxp5wp3hgmafbzdzsk4gqnllq1m1gcsfyzkvpkvmbn4aa9n"; depends=[AnnotationDbi]; };
paeg1aprobe = derive2 { name="paeg1aprobe"; version="2.18.0"; sha256="0hbyd402wf9nzy2g93nhnf2zsi9jvhgfk0llxlyfk0kqxs0y4byy"; depends=[AnnotationDbi]; };
pd_081229_hg18_promoter_medip_hx1 = derive2 { name="pd.081229.hg18.promoter.medip.hx1"; version="0.99.4"; sha256="1h4925dmw0vfsnhllg55gswq3sxfmx9rcjzifdvgs9y27399psrr"; depends=[Biostrings DBI IRanges oligo oligoClasses RSQLite]; };
@ -832,8 +851,9 @@ in with self; {
pedbarrayv9_db = derive2 { name="pedbarrayv9.db"; version="3.2.3"; sha256="0x9m9m4nmdhc0j5244avmlfwljcpw0sh44l1b00cx05swi3vmjlp"; depends=[AnnotationDbi org_Hs_eg_db]; };
phastCons100way_UCSC_hg19 = derive2 { name="phastCons100way.UCSC.hg19"; version="3.7.2"; sha256="1jmc4k4zgkx5vr2plnidnd9bidlwlb0kr7mjg60cqjw7dq7jl1fa"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; };
phastCons100way_UCSC_hg38 = derive2 { name="phastCons100way.UCSC.hg38"; version="3.7.1"; sha256="0dka39rvx4d3wbcjypcgvc19s6cnxkkfywa4irv23kpibq1sjyv0"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; };
phastCons30way_UCSC_hg38 = derive2 { name="phastCons30way.UCSC.hg38"; version="3.11.1"; sha256="0g7mn3wa9l9hpks828n82rads1ls5mjgh6dfgk3iw1nrl0ylws4v"; depends=[AnnotationHub GenomicScores]; };
phastCons7way_UCSC_hg38 = derive2 { name="phastCons7way.UCSC.hg38"; version="3.7.1"; sha256="105isdrb3nsy30wd8yy9vrrv8b7c8izc11xqqixg6rcriacd0rl0"; depends=[BSgenome GenomeInfoDb GenomicRanges GenomicScores IRanges S4Vectors]; };
pig_db0 = derive2 { name="pig.db0"; version="3.7.1"; sha256="06hwggby003y64mhrk4b48zxnh3csqi5hm9y42iccz17qs7j1jmi"; depends=[AnnotationDbi]; };
pig_db0 = derive2 { name="pig.db0"; version="3.11.2"; sha256="12pidwjb2wjzcz72m8jcp8spr6nkxfhkl75qr5b062pyw4mkrp6r"; depends=[AnnotationDbi]; };
plasmodiumanophelescdf = derive2 { name="plasmodiumanophelescdf"; version="2.18.0"; sha256="1vs36091djinn3g6rjhmy9xfdyi58365zbcjc9mf50adnp2i5fq9"; depends=[AnnotationDbi]; };
plasmodiumanophelesprobe = derive2 { name="plasmodiumanophelesprobe"; version="2.18.0"; sha256="03hfq51nrpmx8ihc48jiih6bk99irrgal9x7i7mgcv8xd508gcsy"; depends=[AnnotationDbi]; };
poplarcdf = derive2 { name="poplarcdf"; version="2.18.0"; sha256="0j28czs936j2wgwp63qbwl1mjcflcrx7ir88jzxkkw7411ch1gl1"; depends=[AnnotationDbi]; };
@ -862,14 +882,15 @@ in with self; {
ragene20sttranscriptcluster_db = derive2 { name="ragene20sttranscriptcluster.db"; version="8.7.0"; sha256="135cgn92raa6f9yiw4k25rn04rpg5mdnf969l66x4s1jcc0rwscq"; depends=[AnnotationDbi org_Rn_eg_db]; };
ragene21stprobeset_db = derive2 { name="ragene21stprobeset.db"; version="8.7.0"; sha256="0lp4prymrm3cp8yq1hba9bylw22hcvlx7piqpvjx51hj79yrwdig"; depends=[AnnotationDbi org_Rn_eg_db]; };
ragene21sttranscriptcluster_db = derive2 { name="ragene21sttranscriptcluster.db"; version="8.7.0"; sha256="1b7s2r4w1yy2v3srs6n931zc64qf58nq4apmq2ag5nx50wspima1"; depends=[AnnotationDbi org_Rn_eg_db]; };
rat_db0 = derive2 { name="rat.db0"; version="3.7.1"; sha256="1k7vx0iihb5sgaicrxbv33fi7kjwqfskbwn37aj769nqxq66fx8h"; depends=[AnnotationDbi]; };
rat_db0 = derive2 { name="rat.db0"; version="3.11.2"; sha256="0v7agg9rx4fifqp7p95lxh0fkwx891w043p0qqqpfksvrbshx13y"; depends=[AnnotationDbi]; };
rat2302_db = derive2 { name="rat2302.db"; version="3.2.3"; sha256="0vj4vkx091m34xqjh6gv6m2iqszvn5rq3kvnpyq3fin5v42wrsr1"; depends=[AnnotationDbi org_Rn_eg_db]; };
rat2302cdf = derive2 { name="rat2302cdf"; version="2.18.0"; sha256="1748rc6yypd7y8wgr1qg632pcsxx0fkxjz6b3z4fhblgdllhy9wk"; depends=[AnnotationDbi]; };
rat2302frmavecs = derive2 { name="rat2302frmavecs"; version="0.99.11"; sha256="0qy5hf86lrkn20yg6d46kcw9fjc0qhsbzbyavaj1v2zl34xvr1ii"; depends=[affy frma]; };
rat2302probe = derive2 { name="rat2302probe"; version="2.18.0"; sha256="1zwjgbcb9d4ib6z1iyjz8x11lq0b5gqs08y6j3idb5wf3i2p521v"; depends=[AnnotationDbi]; };
ratCHRLOC = derive2 { name="ratCHRLOC"; version="2.1.6"; sha256="0mgk6lwvvdwjzjh4r1q1q6nfnx4vqx9iy6gmbrb9f31jf30hqnsb"; depends=[]; };
rattoxfxcdf = derive2 { name="rattoxfxcdf"; version="2.18.0"; sha256="0q84lfaxnnj2zbm5q8xswa1md15fjj4i0djnqr835ixzn7px4yqn"; depends=[AnnotationDbi]; };
rattoxfxprobe = derive2 { name="rattoxfxprobe"; version="2.18.0"; sha256="1kp159553rkcn9yh6x3yph3yjz2ja21wi9j5ax03qnhwlsl1x8ik"; depends=[AnnotationDbi]; };
reactome_db = derive2 { name="reactome.db"; version="1.66.0"; sha256="18kh68sx9825bi92904xcygjh9jsbxyhsp4ghw1wh160na65gy3v"; depends=[AnnotationDbi]; };
reactome_db = derive2 { name="reactome.db"; version="1.70.0"; sha256="05wc4fp0faq6h3kq5rwafnips043as31yq11mrjngfxvf5i10srg"; depends=[AnnotationDbi]; };
rgu34a_db = derive2 { name="rgu34a.db"; version="3.2.3"; sha256="1s2sd5bqlj4qhamhrnb9byxn8nc7z265mqy7zzkgxcd6a2k472vp"; depends=[AnnotationDbi org_Rn_eg_db]; };
rgu34acdf = derive2 { name="rgu34acdf"; version="2.18.0"; sha256="08z9f16xp1m2mwl9vlmbffxl4zyyl8cgzf6wp66rrm32lvl0nbwq"; depends=[AnnotationDbi]; };
rgu34aprobe = derive2 { name="rgu34aprobe"; version="2.18.0"; sha256="1gjxyq9128jgv3ic386f84rajgf3wz7yi2dja80y0ff4m0a48dlh"; depends=[AnnotationDbi]; };
@ -883,7 +904,7 @@ in with self; {
rgug4105a_db = derive2 { name="rgug4105a.db"; version="3.2.3"; sha256="0lq8k95qm0q7j65nf16p3f09dn9zs87n3k561wxrgi2lb0pf6j40"; depends=[AnnotationDbi org_Rn_eg_db]; };
rgug4130a_db = derive2 { name="rgug4130a.db"; version="3.2.3"; sha256="0zlcn9spw23bj3px9z1l2f5afn09zbr6rv0nbd2h6dd12wrvy1zk"; depends=[AnnotationDbi org_Rn_eg_db]; };
rgug4131a_db = derive2 { name="rgug4131a.db"; version="3.2.3"; sha256="1r272jf9cflf1yf4bznp4d59h7bd7adh1i3rf890h5ffc0xzf5cq"; depends=[AnnotationDbi org_Rn_eg_db]; };
rhesus_db0 = derive2 { name="rhesus.db0"; version="3.7.1"; sha256="1k695lwbwznk4i03dqpfyk0nx4s9n1qlgh9ccfxjy591lraj7b4j"; depends=[AnnotationDbi]; };
rhesus_db0 = derive2 { name="rhesus.db0"; version="3.11.2"; sha256="06vq8zzy5kxp9winq2vxw5b803dbhb4sh057k9rl2jy32vmblm45"; depends=[AnnotationDbi]; };
rhesuscdf = derive2 { name="rhesuscdf"; version="2.18.0"; sha256="0q2alkxm80wkzaf0q80df27q30qkswybavz05x6ywsihbs9h0nb8"; depends=[AnnotationDbi]; };
rhesusprobe = derive2 { name="rhesusprobe"; version="2.18.0"; sha256="0fd8pvwvpcmx41k80nbccjxllh39fvjf7l9dr8facisl1x7gsfil"; depends=[AnnotationDbi]; };
ri16cod_db = derive2 { name="ri16cod.db"; version="3.4.0"; sha256="1xz533vxjdyxx1wkks0kgk6b90sxs44iqcsvyds0xcm573bx8c6q"; depends=[AnnotationDbi org_Rn_eg_db]; };
@ -922,8 +943,8 @@ in with self; {
vitisviniferaprobe = derive2 { name="vitisviniferaprobe"; version="2.18.0"; sha256="1ggz1s37dwvrkhj4vx2civyhap7bgqsshy33lk14z4fjsayfi39a"; depends=[AnnotationDbi]; };
wheatcdf = derive2 { name="wheatcdf"; version="2.18.0"; sha256="1gmbrdilqvm54h6nkb1cm01ki8aipiywd4qj8gpwlm2hqrimr8kr"; depends=[AnnotationDbi]; };
wheatprobe = derive2 { name="wheatprobe"; version="2.18.0"; sha256="1fifi3pvzdrg356idwz0kx7qlf5mssdxlyvwpn3cjgw0z7n7cnw8"; depends=[AnnotationDbi]; };
worm_db0 = derive2 { name="worm.db0"; version="3.7.1"; sha256="0p5rzmkars7kl4y4mlq6jbmgp1mdfw3jcnvhl50dnpqc7h28y4xf"; depends=[AnnotationDbi]; };
xenopus_db0 = derive2 { name="xenopus.db0"; version="3.7.1"; sha256="067vs7b2slmragqqnfpgy6m187cz1rx9r5agizrjycndzdzkpy3k"; depends=[AnnotationDbi]; };
worm_db0 = derive2 { name="worm.db0"; version="3.11.2"; sha256="0w124pn96yvl0ksb0bncwxdhfzcg491s60rfla3gr17pfg1h2klv"; depends=[AnnotationDbi]; };
xenopus_db0 = derive2 { name="xenopus.db0"; version="3.11.2"; sha256="1l9pi5ayrkrq5gswms33z3ldip3kj2bn5pj6nmy1dzx9i4d0llnr"; depends=[AnnotationDbi]; };
xenopuslaeviscdf = derive2 { name="xenopuslaeviscdf"; version="2.18.0"; sha256="1bcz1hr7gxw6ac4qvw0giph6hfcf5i9b11s274ypq512qc1d32iq"; depends=[AnnotationDbi]; };
xenopuslaevisprobe = derive2 { name="xenopuslaevisprobe"; version="2.18.0"; sha256="0prb14zn2gvgxq8w0y21x1ng51cn3bgjhkppf7zkmnq1xkzvq0pw"; depends=[AnnotationDbi]; };
xlaevis_db = derive2 { name="xlaevis.db"; version="3.2.3"; sha256="0cdi71c8pflb8n4yfxc0wmfi51w6z0dlz7nw5hv0hkx547v79d53"; depends=[AnnotationDbi org_Xl_eg_db]; };
@ -935,7 +956,7 @@ in with self; {
ye6100subbcdf = derive2 { name="ye6100subbcdf"; version="2.18.0"; sha256="1169hv56981b915rlr5w5sn6ppyjd8as7f4k1hbjzadrdrl3glwp"; depends=[AnnotationDbi]; };
ye6100subccdf = derive2 { name="ye6100subccdf"; version="2.18.0"; sha256="0mhr4zd33gfvvivc17k7fb6nvmhq6h3q0xbx2zl09zd6qk09kizm"; depends=[AnnotationDbi]; };
ye6100subdcdf = derive2 { name="ye6100subdcdf"; version="2.18.0"; sha256="11b1fflgc34lrj4yf1p7way5n83cm9c7znsbxpzlwddwyy8qib30"; depends=[AnnotationDbi]; };
yeast_db0 = derive2 { name="yeast.db0"; version="3.7.1"; sha256="1shjbflvlxipiyapwd6jpqs9mp8nyr3j63wcpnaznmxv0z5k0fw8"; depends=[AnnotationDbi]; };
yeast_db0 = derive2 { name="yeast.db0"; version="3.11.2"; sha256="1wbywd8lbbgndhyy0nwdxc91cq5s90q67q6wpdikzc5m7px3v4qx"; depends=[AnnotationDbi]; };
yeast2_db = derive2 { name="yeast2.db"; version="3.2.3"; sha256="1xns0129ifklipbardybkjyxfwnlklavq0k6s15wk2iwk7vxa33s"; depends=[AnnotationDbi org_Sc_sgd_db]; };
yeast2cdf = derive2 { name="yeast2cdf"; version="2.18.0"; sha256="0c68val9x8bfnv4xx0vag9dxwsx5q8dzbj0dpha3nshh12jw48w9"; depends=[AnnotationDbi]; };
yeast2probe = derive2 { name="yeast2probe"; version="2.18.0"; sha256="125nif693qcmxc0nnnz917f9avggcdr8g9rfvx2qdc54a2l7vdb7"; depends=[AnnotationDbi]; };
@ -944,7 +965,7 @@ in with self; {
ygs98frmavecs = derive2 { name="ygs98frmavecs"; version="1.3.0"; sha256="1xrm1209xnknwvad7nvg1a0mbxz15z12yd4x5bia3cq03zcmzf9m"; depends=[]; };
ygs98probe = derive2 { name="ygs98probe"; version="2.18.0"; sha256="0awf6z4j2vb2jk9a9j2r512yd3m31660y68pasa9mp488m270a3q"; depends=[AnnotationDbi]; };
zebrafish_db = derive2 { name="zebrafish.db"; version="3.2.3"; sha256="1n6p04hlm5c32fnficx294s7n7izy5460avagw8hx1g5xryhdzqk"; depends=[AnnotationDbi org_Dr_eg_db]; };
zebrafish_db0 = derive2 { name="zebrafish.db0"; version="3.7.1"; sha256="1x9s6sxxgijjnrvg4fggnqhv10zwsfw6hy1qa93rjmpgqpr7ad20"; depends=[AnnotationDbi]; };
zebrafish_db0 = derive2 { name="zebrafish.db0"; version="3.11.2"; sha256="1lvkxhql6rm3bs2pszk0d6ib8xjrhqmgznn9lnpn0v2lw42ld3vf"; depends=[AnnotationDbi]; };
zebrafishcdf = derive2 { name="zebrafishcdf"; version="2.18.0"; sha256="0sq1xqhblbilvaiabhqyl9gxdj3jg576vgq8v0cls1zvvx0isrx0"; depends=[AnnotationDbi]; };
zebrafishprobe = derive2 { name="zebrafishprobe"; version="2.18.0"; sha256="1pb8z2rdhq11hq391xyi236scyafbp56kbhhwsnha36yygz5drw0"; depends=[AnnotationDbi]; };
}

750
third_party/nixpkgs/pkgs/development/r-modules/bioc-experiment-packages.nix generated vendored
View file

@ -4,363 +4,397 @@
# Rscript generate-r-packages.R bioc-experiment >new && mv new bioc-experiment-packages.nix
{ self, derive }:
let derive2 = derive { biocVersion = "3.8"; };
let derive2 = derive { biocVersion = "3.11"; };
in with self; {
ABAData = derive2 { name="ABAData"; version="1.11.0"; sha256="0ihr0av55kfg36igb1dn5q132q4gnyaf041xqi4rw7n67525qdap"; depends=[]; };
ALL = derive2 { name="ALL"; version="1.23.0"; sha256="1m3bx001qngwx0h64kv187q7bsxm22prfm1npbjrfzhg4vjn8rnf"; depends=[Biobase]; };
ALLMLL = derive2 { name="ALLMLL"; version="1.21.0"; sha256="14pwfwndrapk1h824hw6dyxlkicxqylx56kky9zg8q0qfm5w1ygf"; depends=[affy]; };
ARRmData = derive2 { name="ARRmData"; version="1.17.0"; sha256="1y6lld8ijxw2g1qxs1bzvjppwfax6yv1ww18axn9553ibjznis7b"; depends=[]; };
ASICSdata = derive2 { name="ASICSdata"; version="1.1.0"; sha256="050ihbi20chjd5gvyf5jcmjhb1kvdvz80nh5aw1yp8ydfgdnqqwg"; depends=[]; };
Affyhgu133A2Expr = derive2 { name="Affyhgu133A2Expr"; version="1.17.0"; sha256="1zcai5p4vgpmdv4zdnrqkdszg6wiq6ajj4vbas4hcyp5yglfby3h"; depends=[]; };
Affyhgu133Plus2Expr = derive2 { name="Affyhgu133Plus2Expr"; version="1.15.0"; sha256="144wb8sniifglqdryfvpnxx7hv1v2c6djqzbk4mq4lkrp64a251n"; depends=[]; };
Affyhgu133aExpr = derive2 { name="Affyhgu133aExpr"; version="1.19.0"; sha256="0glp22hqblylqc9n8jcx19k2p7ld9ykdnvqgr7nbipsvm4zgnkn1"; depends=[]; };
AffymetrixDataTestFiles = derive2 { name="AffymetrixDataTestFiles"; version="0.19.0"; sha256="0nf3260aqz4831q8i83nqlcf5hq9b988ly5rhrwyb8mv2ncs0z9k"; depends=[]; };
Affymoe4302Expr = derive2 { name="Affymoe4302Expr"; version="1.19.0"; sha256="05w1w7fqvhf2xi2d0d5rzigv3sriwy5jxak7j8bvmbwnx31inv5k"; depends=[]; };
AmpAffyExample = derive2 { name="AmpAffyExample"; version="1.21.0"; sha256="1k1qzxakbavm10bd0ybs1gk97w1y825iqvwimn0cr128qw2xxkyj"; depends=[affy]; };
AneuFinderData = derive2 { name="AneuFinderData"; version="1.9.0"; sha256="0m3pvsdd2y1947zl582791bsip95j41fc6g9gbin3cg51y7lb6xr"; depends=[]; };
AshkenazimSonChr21 = derive2 { name="AshkenazimSonChr21"; version="1.11.0"; sha256="08r5430gqsmkbh4n49ac2fl0m24zmqjnc9yxppw5mr0d4n5l26y5"; depends=[]; };
AssessORFData = derive2 { name="AssessORFData"; version="0.99.2"; sha256="0yi2vxzg21nkqlywcpv6n2vzksl77cvkc42ii9p7gy9kpv56553k"; depends=[DECIPHER]; };
BeadArrayUseCases = derive2 { name="BeadArrayUseCases"; version="1.19.1"; sha256="08c7aqnh4wnhnalrvchcyhy5vmxq5xkq26pmp9xjn2x4zwf4156y"; depends=[beadarray GEOquery limma]; };
BloodCancerMultiOmics2017 = derive2 { name="BloodCancerMultiOmics2017"; version="1.1.4"; sha256="1hh1l134cmbcmyc40fwfrwrbx6qyiv9a3bz8hp9vbdf1vslhcnpk"; depends=[beeswarm Biobase DESeq2 devtools dplyr ggdendro ggplot2 glmnet gtable ipflasso RColorBrewer reshape2 scales SummarizedExperiment survival tibble]; };
CCl4 = derive2 { name="CCl4"; version="1.19.0"; sha256="1j4q7mm4lwi3rcf0y6zj36xc6n7c8y6l8iv9ac4avbgvr1rvlxaq"; depends=[Biobase limma]; };
CLL = derive2 { name="CLL"; version="1.21.0"; sha256="103lmn87zw73sx30ln6g4382ydpi97b1zsm7www8bwlnw6zx7k7g"; depends=[affy Biobase]; };
CLLmethylation = derive2 { name="CLLmethylation"; version="1.1.1"; sha256="1vbvxb3bnwx4ngxkk6vrhshcfyrv0fvs3vhlqk0j9q1mhxg8p3a9"; depends=[ExperimentHub SummarizedExperiment]; };
COHCAPanno = derive2 { name="COHCAPanno"; version="1.17.0"; sha256="199xz5qwp06kr3smr25vx2w25hmzf7qbpaw18aj7bvccsdsyvky9"; depends=[]; };
CONFESSdata = derive2 { name="CONFESSdata"; version="1.9.0"; sha256="091ydgxqldrcr3b73pqyk6555yyclnnr4yizi0kknqasx33sb802"; depends=[]; };
COPDSexualDimorphism_data = derive2 { name="COPDSexualDimorphism.data"; version="1.17.0"; sha256="1pgfqrp6cx94marm96swqq8c9nr00xdmlf62hvmacqwspsajbnya"; depends=[]; };
COSMIC_67 = derive2 { name="COSMIC.67"; version="1.17.0"; sha256="0qd0xbc8hy25hyy8bilim2w5inhwz88rypbqc8vjlg54r2yl12nh"; depends=[GenomicRanges SummarizedExperiment VariantAnnotation]; };
CRCL18 = derive2 { name="CRCL18"; version="1.1.0"; sha256="1hxh7fldfy2v9sii5clwi9i568dcc742nd4da0048p4pm87qxcsv"; depends=[Biobase]; };
CardinalWorkflows = derive2 { name="CardinalWorkflows"; version="1.13.0"; sha256="1rjp3ybc0yx8sjqp4ahadgymlld2l2hn3dxxvpng06qpp5jch0zq"; depends=[Cardinal]; };
CellMapperData = derive2 { name="CellMapperData"; version="1.7.0"; sha256="0zjssdm2z7i6bcp781x9lz09dmh5krvvxg5a0la79dj5vvs72cjp"; depends=[CellMapper ExperimentHub]; };
ChAMPdata = derive2 { name="ChAMPdata"; version="2.13.0"; sha256="1xa5lcxf7npb8mykqpx84vpjavl9xzwl24nlsaaw3gk75cfrhpkx"; depends=[BiocGenerics GenomicRanges]; };
ChIC_data = derive2 { name="ChIC.data"; version="1.1.4"; sha256="0s8nm65kwk2cbs8g66zc46q31nd66fdm0kk0d6gxl6zhv0p3d8dv"; depends=[caret]; };
ChIPXpressData = derive2 { name="ChIPXpressData"; version="1.19.0"; sha256="1f32hzqgpiclby25223ksp63xlhdk7d52sf2xc97hpjig0571630"; depends=[bigmemory]; };
ChIPexoQualExample = derive2 { name="ChIPexoQualExample"; version="1.5.0"; sha256="0y2s4hw7hbfspy1hjsqkaw72pm26k911699k6sw4jhvjh7mkvjbf"; depends=[]; };
ChimpHumanBrainData = derive2 { name="ChimpHumanBrainData"; version="1.19.0"; sha256="1i2aj1vxak6b53mpcd36q2xwgpddllqpqz3wii7rrsa9mg2gaaza"; depends=[affy hexbin limma qvalue statmod]; };
ConnectivityMap = derive2 { name="ConnectivityMap"; version="1.17.0"; sha256="1zz0vq192jfnp494mp61xmkxyd94bbh9xs268jd7ynnlpjp9phsx"; depends=[]; };
CopyNeutralIMA = derive2 { name="CopyNeutralIMA"; version="0.99.14"; sha256="1lvdacdazpp071grc75gjxmhwjzkm22lhwzjvf6baclq9qfjgqp2"; depends=[ExperimentHub Rdpack]; };
CopyhelpeR = derive2 { name="CopyhelpeR"; version="1.13.1"; sha256="014jissvpkj2d0sz3r1dr5c5qs29hbvs9jvm8bl86mld8ff3nlkc"; depends=[]; };
DAPARdata = derive2 { name="DAPARdata"; version="1.11.4"; sha256="06qwja8qkbix6ial81yv1q3bxrdmqrgridina094p1xrxbfrn5sb"; depends=[knitr MSnbase]; };
DLBCL = derive2 { name="DLBCL"; version="1.21.0"; sha256="0advvjkd6skynjjnz4s9mdnh0l9l2zhn4n9x0kg23dmsg4r8vqm7"; depends=[Biobase]; };
DMRcatedata = derive2 { name="DMRcatedata"; version="1.17.0"; sha256="1a669jjvkjjklbh2kxrv3y2clfps067w6w19y1yr2a8wc7crbl4a"; depends=[GenomicRanges]; };
DREAM4 = derive2 { name="DREAM4"; version="1.17.0"; sha256="0s3y3wgg487p5fswbin4237mrm9kzbq12a84jiixhql1j2ysbhcs"; depends=[SummarizedExperiment]; };
DeSousa2013 = derive2 { name="DeSousa2013"; version="1.17.2"; sha256="1xz1l83my34kwr4wk6vq3q5yzd3i0ky5qm44wx65f4d92hn7k3v5"; depends=[affy AnnotationDbi Biobase cluster ConsensusClusterPlus frma frmaTools gplots hgu133plus2_db hgu133plus2frmavecs pamr rgl ROCR siggenes survival sva]; };
DmelSGI = derive2 { name="DmelSGI"; version="1.13.1"; sha256="0v25rb5myhki1vvmmzyhpa8n0vv623zj6lh26a10iq4i5bvda9c5"; depends=[abind gplots igraph knitr limma rhdf5 TSP]; };
DonaPLLP2013 = derive2 { name="DonaPLLP2013"; version="1.19.1"; sha256="1sbhq0m67v5swyafrn74cjz4h3r6d1qmn2skkz3xwjgm70qpbjrb"; depends=[EBImage]; };
DrugVsDiseasedata = derive2 { name="DrugVsDiseasedata"; version="1.17.0"; sha256="05xykgmiakw6n8f1b86wbyjzs9v6b7qz8119pwvbfjgncgwqmcx9"; depends=[]; };
DuoClustering2018 = derive2 { name="DuoClustering2018"; version="0.99.2"; sha256="0f4ps36wd1yll9w4zkx6n4kz0svqfajmb11a5c51b55572siq203"; depends=[dplyr ExperimentHub ggplot2 ggthemes magrittr mclust purrr reshape2 tidyr viridis]; };
DvDdata = derive2 { name="DvDdata"; version="1.17.0"; sha256="0x5crrym68rw2r9nmb33j1n1f5rxpj5rzn8b5j403ikxywfwxblh"; depends=[]; };
EGSEAdata = derive2 { name="EGSEAdata"; version="1.9.0"; sha256="1bmxm535h9ilnpbm196rf40543kh1yf5ldqxilhiyx5k0qaaihmz"; depends=[]; };
ELMER_data = derive2 { name="ELMER.data"; version="2.5.5"; sha256="192jdmxl17m8s1r95c2lizh2r5zpazvx0az8xj22dva0mrazql9c"; depends=[GenomicRanges]; };
EatonEtAlChIPseq = derive2 { name="EatonEtAlChIPseq"; version="0.19.0"; sha256="0w3bcssqpbzgb03ld9j9jv57bvn8yfpkglhb4minbkqbhslv4j52"; depends=[GenomicRanges rtracklayer ShortRead]; };
FANTOM3and4CAGE = derive2 { name="FANTOM3and4CAGE"; version="1.17.0"; sha256="0iz0f467d2wh5cly3cf2y7kkrv8pwihsccf6zsdrqpq4a1ijiml7"; depends=[]; };
FIs = derive2 { name="FIs"; version="1.9.0"; sha256="135r3vc8rdjrhl0a6s85052mzranlxd5jkiwxbymsjg6mglsjyvh"; depends=[]; };
Fletcher2013a = derive2 { name="Fletcher2013a"; version="1.17.0"; sha256="05kvsbr46yjpkdnn7rwxhj3wnlrgz92fgg35b8i781131vpy4lzh"; depends=[Biobase gplots limma VennDiagram]; };
Fletcher2013b = derive2 { name="Fletcher2013b"; version="1.17.0"; sha256="1rfsb49fcn127nzykwndzp7gapd36j3r01dvvhn87w6ryy9yc98c"; depends=[Fletcher2013a igraph RColorBrewer RedeR RTN]; };
FlowSorted_Blood_450k = derive2 { name="FlowSorted.Blood.450k"; version="1.19.0"; sha256="0ngh5zwikm83rzv9aykhxijf7nj345nnak2207jn4frdq8qahh3l"; depends=[minfi]; };
FlowSorted_Blood_EPIC = derive2 { name="FlowSorted.Blood.EPIC"; version="0.99.37"; sha256="1kfh6x69r3vc7v3in1q1n8frbsha5z8gmds7dcgy39wvry16c6lm"; depends=[ExperimentHub genefilter IlluminaHumanMethylationEPICanno_ilm10b4_hg19 minfi nlme quadprog S4Vectors SummarizedExperiment]; };
FlowSorted_CordBlood_450k = derive2 { name="FlowSorted.CordBlood.450k"; version="1.9.0"; sha256="1ib9g4zy3zwk7m6hl9ggi030qwrjch9jnip6d7a4b27cjzlf0sdq"; depends=[minfi]; };
FlowSorted_CordBloodNorway_450k = derive2 { name="FlowSorted.CordBloodNorway.450k"; version="1.7.0"; sha256="04i701nl8w8sdc85z1y8gzg076n3znnd9fkp35a7pq7sczkfih90"; depends=[minfi]; };
FlowSorted_DLPFC_450k = derive2 { name="FlowSorted.DLPFC.450k"; version="1.17.0"; sha256="1d9xq8ha0p1injk8l16vggfkzk7xlsgaqb227gvl6xc49q8dmh5m"; depends=[minfi]; };
FunciSNP_data = derive2 { name="FunciSNP.data"; version="1.17.0"; sha256="1vp55zd2ifamxm248jskvf2y29cgjyx98jw41h2pbly31qxq4h49"; depends=[IRanges rtracklayer]; };
GGdata = derive2 { name="GGdata"; version="1.19.0"; sha256="0mr6l11bgg8ncga9ivwdps6jp6zbcjs5jxvcpf834qaj92h63mrg"; depends=[AnnotationDbi Biobase GGBase illuminaHumanv1_db snpStats]; };
GIGSEAdata = derive2 { name="GIGSEAdata"; version="0.99.11"; sha256="1rn6dmji5ja1p83gai18bcmdc9vi0fm4pq4yk7wdsbv6p334cqlq"; depends=[]; };
GSBenchMark = derive2 { name="GSBenchMark"; version="1.1.0"; sha256="1a9hlgcz9m36gzkmxkq4i308hsm617hmsxmwq09yd5cxq8dl80g4"; depends=[]; };
GSE62944 = derive2 { name="GSE62944"; version="1.9.0"; sha256="1s28rkr5nm91vnl6cx0gifib4nw70gs8bhmv003f9kbpiq420i8k"; depends=[Biobase GEOquery]; };
GSVAdata = derive2 { name="GSVAdata"; version="1.17.0"; sha256="1gjc9psmx0i25bwki6l74d8jg3mrvfzjdnxs5bhbqnzab6fzdfh0"; depends=[Biobase GSEABase hgu95a_db]; };
GWASdata = derive2 { name="GWASdata"; version="1.19.0"; sha256="0i09njrq0fzwvzj6lqsa7kdnwi35lm7z0akywh0mr87i6dlqj8sq"; depends=[GWASTools]; };
GeuvadisTranscriptExpr = derive2 { name="GeuvadisTranscriptExpr"; version="1.9.0"; sha256="1h6ghr75h1i87lbarsganiw6mgjyiha4zv4hbjdjljc464s11b0d"; depends=[]; };
HD2013SGI = derive2 { name="HD2013SGI"; version="1.21.1"; sha256="1m3q08m21vim5j520wgiwszrp6nnkrsfqf6wac8cyzw1qs3cp1s6"; depends=[EBImage geneplotter gplots limma LSD RColorBrewer splots vcd]; };
HDCytoData = derive2 { name="HDCytoData"; version="1.1.2"; sha256="1ay7r0aya0b6rxwscg3lwzlgl9iaj9ykii52lmzpxx40yc6szpnv"; depends=[ExperimentHub flowCore SummarizedExperiment]; };
HEEBOdata = derive2 { name="HEEBOdata"; version="1.19.0"; sha256="1z8qb5xrzadg6fxg8cx04dpad3qiab5m8vhgdqw4xs8xdaqd4g1m"; depends=[]; };
HIVcDNAvantWout03 = derive2 { name="HIVcDNAvantWout03"; version="1.21.0"; sha256="0pgb0r6zp6v0wq16c5zjxzjjwb6cjjp3cn8jnh4p91rwf43za4rh"; depends=[]; };
HMP16SData = derive2 { name="HMP16SData"; version="1.1.4"; sha256="0qjqf7ipczv3rs4r4l5ynagi46ksb98b8mylgvbclrqp7ny2wcbq"; depends=[AnnotationHub assertthat dplyr ExperimentHub kableExtra knitr magrittr readr S4Vectors SummarizedExperiment tibble]; };
HSMMSingleCell = derive2 { name="HSMMSingleCell"; version="1.1.0"; sha256="0fl3r3sdnnn3s9h5sn0bmgpi0hj965cwgca51qkwcvll4rjamyq2"; depends=[]; };
HarmanData = derive2 { name="HarmanData"; version="1.9.0"; sha256="1c6avjny0fasj99q0a2dm8p3h68jalcglx51b90fnyjgvqgx3h2g"; depends=[]; };
HarmonizedTCGAData = derive2 { name="HarmonizedTCGAData"; version="1.3.0"; sha256="07fvdf6kzipa42r5dmmld7p2chbi074d248da0xmlm8lm1i0wkc9"; depends=[ExperimentHub]; };
HelloRangesData = derive2 { name="HelloRangesData"; version="1.7.0"; sha256="05yr2mklxwfij6yzmhpk83mlrq7zfcn8finf2m4lrvdbdzl1bkki"; depends=[]; };
HiCDataHumanIMR90 = derive2 { name="HiCDataHumanIMR90"; version="1.1.0"; sha256="0nmd7iqa6cg74xvz1a2x9ahyzs3kwd4fnhz5nkh62sgndj1pv62l"; depends=[]; };
HiCDataLymphoblast = derive2 { name="HiCDataLymphoblast"; version="1.17.0"; sha256="0hjhlq7vx71lwv37vidwlb819hm617dx7g39hgf20ggccmp310rh"; depends=[]; };
Hiiragi2013 = derive2 { name="Hiiragi2013"; version="1.17.0"; sha256="17mnwnpsam62mc8bqdwjfh9fiayasbkx1gd3bbp0k82w3az9yzbf"; depends=[affy Biobase boot clue cluster genefilter geneplotter gplots gtools KEGGREST lattice latticeExtra MASS mouse4302_db RColorBrewer xtable]; };
HumanAffyData = derive2 { name="HumanAffyData"; version="1.7.0"; sha256="02hp2a7h0ivzdfql3vsrvxrn4answlr7hrhw5azdjw8jh895dd1j"; depends=[Biobase ExperimentHub]; };
IHWpaper = derive2 { name="IHWpaper"; version="1.9.6"; sha256="19fg4ca9hhlh4as0nyd3qkkgqphghgvlcs57279pl42nphzz1hw0"; depends=[Biobase BiocGenerics BiocParallel cowplot DESeq2 dplyr fdrtool genefilter ggplot2 IHW qvalue Rcpp SummarizedExperiment]; };
ITALICSData = derive2 { name="ITALICSData"; version="2.19.0"; sha256="0i09g3dj3rz0yr4n35g9fhc5df957i928vbinsx2bl3jsj7xrf6f"; depends=[]; };
Illumina450ProbeVariants_db = derive2 { name="Illumina450ProbeVariants.db"; version="1.17.0"; sha256="1y219yqipskv3mzf7g75rmzwsp5sq2r9cqacbpyc2gk28z6dfnix"; depends=[]; };
IlluminaDataTestFiles = derive2 { name="IlluminaDataTestFiles"; version="1.19.0"; sha256="0b6zhvkhpjhz9wr3cfcvyy16l1kvd6aq9p58y78ql9rgpbhz7dcz"; depends=[]; };
Iyer517 = derive2 { name="Iyer517"; version="1.23.0"; sha256="0986lrh1w5c1y3rlc0rx06046h0nw8cdqp1mbsddllpibnbj4ii3"; depends=[Biobase]; };
JASPAR2014 = derive2 { name="JASPAR2014"; version="1.17.0"; sha256="13hrxj4q2r9bdzwnl0qm5ap92051483876rwq73bz6hy5xg73abx"; depends=[Biostrings]; };
JASPAR2016 = derive2 { name="JASPAR2016"; version="1.9.0"; sha256="1gx14sjv9v5705h1763p5js37jrvvlkiqdm7nrawjs4n6y4cpsdf"; depends=[]; };
JctSeqData = derive2 { name="JctSeqData"; version="1.11.0"; sha256="1zrnmvs1mmg07s5fi8m5yqb975kb1nkx98j0shpk9xi5jdbf7x0d"; depends=[]; };
KEGGandMetacoreDzPathwaysGEO = derive2 { name="KEGGandMetacoreDzPathwaysGEO"; version="1.1.0"; sha256="1d4qg0svrmfc6v7dhgxbsn0xfhyplizfh113n26z64y97nfhc21p"; depends=[Biobase BiocGenerics]; };
KEGGdzPathwaysGEO = derive2 { name="KEGGdzPathwaysGEO"; version="1.19.0"; sha256="0w2a3yjp5xhbxq0vhzyka8sx17a095ddnpm4jhac65s6zmndgqr3"; depends=[Biobase BiocGenerics]; };
KOdata = derive2 { name="KOdata"; version="1.7.0"; sha256="0grvn2pc38zv133v60hvjh1jx9dsbrwxrz9c6fb977z1rznrkzz8"; depends=[]; };
LiebermanAidenHiC2009 = derive2 { name="LiebermanAidenHiC2009"; version="0.19.0"; sha256="1i6rl8mziv8apxxa2hlmsg6ramq4aasbg9nxj963lsk9b6gnrzlf"; depends=[IRanges KernSmooth]; };
ListerEtAlBSseq = derive2 { name="ListerEtAlBSseq"; version="1.13.0"; sha256="1p3f67zdihy5prbgqm27bdpnz3gmag3jnya0y7gxaqn3lkdd1vns"; depends=[methylPipe]; };
LungCancerACvsSCCGEO = derive2 { name="LungCancerACvsSCCGEO"; version="1.17.0"; sha256="0rgbx36c4hdjc67jsmhrbzyhk3ib8vgmif2g131rly2057zs43f2"; depends=[]; };
LungCancerLines = derive2 { name="LungCancerLines"; version="0.19.0"; sha256="11yycm8l0ykkb22h9rppaqrkvyyphz7q8k5zgha06c4h0lcf9zqi"; depends=[Rsamtools]; };
M3DExampleData = derive2 { name="M3DExampleData"; version="1.7.0"; sha256="0iaaxz3k7kw2qfaq5c7nx8jbyy4lg3csvsgnci7aknm4iqdgzc7v"; depends=[]; };
MAQCsubset = derive2 { name="MAQCsubset"; version="1.19.0"; sha256="1c9gng9mr56h0pqc6xsr489d8m6xixg1iyw6ivdjdm38yg9l5q8h"; depends=[affy Biobase lumi]; };
MAQCsubsetAFX = derive2 { name="MAQCsubsetAFX"; version="1.19.0"; sha256="1901vmaq8k8ip508w3s37bdvrhzbd1f36zgz4z7i2f93464yh188"; depends=[affy Biobase]; };
MAQCsubsetILM = derive2 { name="MAQCsubsetILM"; version="1.19.0"; sha256="1qknpl7k22rbn3v5m4jqs0xiiw2n8wz32qbqsdy13300ynwlvvkn"; depends=[Biobase lumi]; };
MEDIPSData = derive2 { name="MEDIPSData"; version="1.17.0"; sha256="0pazyx7xsvxsv36yhhxjbiyfdmd19ifrbbbfj685hgdx0mpiz8qa"; depends=[]; };
MEEBOdata = derive2 { name="MEEBOdata"; version="1.19.0"; sha256="1naapb5mskfr482lfs5z1ya2bbsz3jwcpm3mm15dhrxl7rrd7z98"; depends=[]; };
MIGSAdata = derive2 { name="MIGSAdata"; version="1.5.0"; sha256="15v3gva9xprr24fv3p49lvwgnh56g9x3nj2qqdd410i1avwn6j8n"; depends=[]; };
MMDiffBamSubset = derive2 { name="MMDiffBamSubset"; version="1.17.0"; sha256="1bjkdyf0knkdbzdmlas81dhnm5k7yslq6km3yzffrvn1kssml47i"; depends=[]; };
MSBdata = derive2 { name="MSBdata"; version="0.99.1"; sha256="1bgzzrynb4066xps7wagawb2pjd64qab7n9il2znsidfprm03bxj"; depends=[]; };
MSstatsBioData = derive2 { name="MSstatsBioData"; version="1.3.0"; sha256="10i3gg9fbhcj6fz4fz1jzmqmabdf9c39ys8yp40qs60glv9gj3qa"; depends=[]; };
MUGAExampleData = derive2 { name="MUGAExampleData"; version="1.1.0"; sha256="18y2ljddzk0g7cn5v8cpc151mrdfzhvj0ah4c988lmc6xlqcyjsv"; depends=[]; };
MetaGxBreast = derive2 { name="MetaGxBreast"; version="1.1.1"; sha256="1lzqv8alxccmfp6s4ylyam9ljwga9p9q5ndnhsljnfiyw820md78"; depends=[AnnotationHub Biobase ExperimentHub impute lattice]; };
MetaGxOvarian = derive2 { name="MetaGxOvarian"; version="1.1.1"; sha256="1djqlmms5a24g8n6mimp4fib3h6qd17p1cl9anzmvl3zscz23p8y"; depends=[AnnotationHub Biobase ExperimentHub impute lattice]; };
MetaGxPancreas = derive2 { name="MetaGxPancreas"; version="1.1.1"; sha256="17vjfnlxrkmdxifmbpfq81zqzzpdhkm5s1aagcnrhgzkv9prszms"; depends=[AnnotationHub Biobase ExperimentHub impute lattice]; };
MethylAidData = derive2 { name="MethylAidData"; version="1.13.0"; sha256="157qvzvw8hhw25qnzv7xax3vzmq38bw4fp0k34jfwgq944srv0h5"; depends=[MethylAid]; };
Mulder2012 = derive2 { name="Mulder2012"; version="0.21.1"; sha256="1ypxdys24g8k98jd50sldqggy28fmjy1cq7gc3pxa10rww6g9h57"; depends=[HTSanalyzeR igraph KEGG_db MASS org_Hs_eg_db PANR pvclust RedeR]; };
NCIgraphData = derive2 { name="NCIgraphData"; version="1.17.0"; sha256="090s04iwbnhdbgprcy15hl596vmgq8x97v34w2xvmsdld5b8z58d"; depends=[]; };
NGScopyData = derive2 { name="NGScopyData"; version="1.1.0"; sha256="13dlsznbg3kk7pi0gdzwnh9i3qdk538qh4rnjbpxr6iw61hwl0zd"; depends=[]; };
Neve2006 = derive2 { name="Neve2006"; version="0.19.0"; sha256="0fn77ic133wfdjrnh5vdk95rwx51nigfmznb7i94n8h5hddmpnbc"; depends=[annotate Biobase hgu133a_db]; };
OMICsPCAdata = derive2 { name="OMICsPCAdata"; version="0.99.11"; sha256="1w38ii5wsaiar4lbn5428pyinzg07zvw4c7fac6a3nx70mhpnxn5"; depends=[MultiAssayExperiment]; };
OnassisJavaLibs = derive2 { name="OnassisJavaLibs"; version="1.3.0"; sha256="0ih472qrzx183pyk0k8agwybn5bycx3hx1j2amjkp42p7hml4iqj"; depends=[rJava]; };
PCHiCdata = derive2 { name="PCHiCdata"; version="1.9.0"; sha256="19cmbyhsi84pi89fy623f7r5yld7qifnqfpvwcb3n7ads5idq1qm"; depends=[Chicago]; };
PGPC = derive2 { name="PGPC"; version="1.9.0"; sha256="10z8r98lp92dh14wpf2hs5n3jzw9y3dw6mf5ssx469368hhaypma"; depends=[ChemmineR EBImage geneplotter ggplot2 gplots imageHTS limma plyr RColorBrewer reshape2 SearchTrees splots]; };
PREDAsampledata = derive2 { name="PREDAsampledata"; version="0.21.0"; sha256="1h7x57vvplxbmsxwalgnkbxwnl91qnfyrn1j6cwyak9pzh58aqh0"; depends=[affy annotate Biobase PREDA]; };
PWMEnrich_Dmelanogaster_background = derive2 { name="PWMEnrich.Dmelanogaster.background"; version="4.15.0"; sha256="1gq65gl4dkas9nl3k31k7xjwdry5c2bgj841w1llbb48wy9w06d8"; depends=[PWMEnrich]; };
PWMEnrich_Hsapiens_background = derive2 { name="PWMEnrich.Hsapiens.background"; version="4.15.0"; sha256="1ryrrw0fdi7bmw8h7pdi02yq9y39dkl0vppyf4ycasnbyn14ddrv"; depends=[PWMEnrich]; };
PWMEnrich_Mmusculus_background = derive2 { name="PWMEnrich.Mmusculus.background"; version="4.15.0"; sha256="1py3rsnd4s9x7r2mhzsp7hqaflg3ip2fgq3cf10f136fdrfcbf1k"; depends=[PWMEnrich]; };
PasillaTranscriptExpr = derive2 { name="PasillaTranscriptExpr"; version="1.9.0"; sha256="1lkqz0kp1jfsi1bvkqhvlqapp658qfm7b1p9kiwk9qakfl0nm7x6"; depends=[]; };
PathNetData = derive2 { name="PathNetData"; version="1.17.0"; sha256="02wdp23y583p9sinhaqkv6lxp836m6kh7na8b2wv6qajanibzhl1"; depends=[]; };
ProData = derive2 { name="ProData"; version="1.19.0"; sha256="0idv9icfzr52k96gij5mlyqyd48mjwka7jg1nhawiaj7g4c005yc"; depends=[Biobase]; };
PtH2O2lipids = derive2 { name="PtH2O2lipids"; version="1.7.1"; sha256="1ypwwrk643shfng4nqs7jpy25058ni2fqq4jhx2yc1j73bx8k834"; depends=[CAMERA LOBSTAHS xcms]; };
QDNAseq_hg19 = derive2 { name="QDNAseq.hg19"; version="1.11.0"; sha256="134mzg2r3bpzcpag5vf2fq8g0xczb5qxyvqqcjzqw654mbafgczr"; depends=[QDNAseq]; };
QDNAseq_mm10 = derive2 { name="QDNAseq.mm10"; version="1.11.0"; sha256="1j5qzwbc7a9h9hlda6c6f53pm6vqm4kdja4z144j4snyac88xclm"; depends=[QDNAseq]; };
QUBICdata = derive2 { name="QUBICdata"; version="1.9.0"; sha256="1r1wcmd7s17gm5q682siy8ld65w6ylch9jamqjlbp8qiqqvfmzdd"; depends=[]; };
RGMQLlib = derive2 { name="RGMQLlib"; version="1.1.0"; sha256="0ijyjgqnap1zmfh6jf4gz9xjiwyzzhyyghvydh6rwkyys46ci8zl"; depends=[]; };
RIPSeekerData = derive2 { name="RIPSeekerData"; version="1.17.0"; sha256="11hrk3cf86jgc7vf14wlyarar2vsnjs0i9wyzvmk76draq9frg30"; depends=[RIPSeeker]; };
RITANdata = derive2 { name="RITANdata"; version="1.5.0"; sha256="0yn8nfvni9h4k9ngzccsqgbjrjvql5gp3haqyg9x334sjsi212c8"; depends=[]; };
RMassBankData = derive2 { name="RMassBankData"; version="1.19.0"; sha256="172x6x7fnzjczi76ibmscbb51l8185lqgiypyyvlisp145mxssdn"; depends=[]; };
RNASeqRData = derive2 { name="RNASeqRData"; version="0.99.8"; sha256="0mfgfmbngx87h9ymbqcdabla5rb26p1kh4rvp3g307rp3hraivcp"; depends=[]; };
RNAinteractMAPK = derive2 { name="RNAinteractMAPK"; version="1.19.1"; sha256="1c90s1vjp4w065zldlzrn64qakwnhfg3s6w3ddmx6hynbrc8lk8j"; depends=[fields gdata genefilter MASS RNAinteract sparseLDA]; };
RNAseqData_HNRNPC_bam_chr14 = derive2 { name="RNAseqData.HNRNPC.bam.chr14"; version="0.19.0"; sha256="0z1b986jvinzh3c1yl9q8wa66wgq8hp8rjbs23glxna77znvkp87"; depends=[]; };
RRBSdata = derive2 { name="RRBSdata"; version="1.1.0"; sha256="18xm228jlpvv5z5r5k3nyjnnmizsyg5lkml4kdrkw8mv7gljgcyb"; depends=[BiSeq]; };
RTCGA_CNV = derive2 { name="RTCGA.CNV"; version="1.9.2"; sha256="19lwjkzs0wrvrgm5a81wq2qcqv2xa1irfnqbv6yrx9c3g3sk6zqi"; depends=[RTCGA]; };
RTCGA_PANCAN12 = derive2 { name="RTCGA.PANCAN12"; version="1.9.2"; sha256="1ain3wscy6n1jjcb8wajpn9h7flhppih01mjjv6y3dxyyiqqchim"; depends=[RTCGA]; };
RTCGA_RPPA = derive2 { name="RTCGA.RPPA"; version="1.9.2"; sha256="0fisrp4mgl035lcwg4pj1zcrmfafsc0kgc6788h9nx9b1vh6s7w9"; depends=[RTCGA]; };
RTCGA_clinical = derive2 { name="RTCGA.clinical"; version="20151101.11.0"; sha256="1y63vnj59sv73zcrnwqd4ikdjx45y9sqb2pj1lnsrhvfbmjazi5z"; depends=[RTCGA]; };
RTCGA_mRNA = derive2 { name="RTCGA.mRNA"; version="1.9.2"; sha256="1bb9b83y3f9012gnr19c2wacj1fkqvbqnymdv3qyc2pn6qhzid93"; depends=[RTCGA]; };
RTCGA_methylation = derive2 { name="RTCGA.methylation"; version="1.9.2"; sha256="1a97cdwm7rn9mipw3v904r4j4ay6p26rv3f8lx2znhz5hg44gnaq"; depends=[RTCGA]; };
RTCGA_miRNASeq = derive2 { name="RTCGA.miRNASeq"; version="1.9.2"; sha256="1lkywq2nvpil8wi8nv73hfxs3hsi71d85n9if7ra4c6ib3frwiwb"; depends=[RTCGA]; };
RTCGA_mutations = derive2 { name="RTCGA.mutations"; version="20151101.11.0"; sha256="1wyiz22rw400hiqqnw41mqpvy8bbj1vxwx3v4vnz6x81drv2sc1n"; depends=[RTCGA]; };
RTCGA_rnaseq = derive2 { name="RTCGA.rnaseq"; version="20151101.11.0"; sha256="0z2k651pd0m9lxl3n62xf41xhk65n33cgf7d5zfwd03hbc07d0gq"; depends=[RTCGA]; };
RUVnormalizeData = derive2 { name="RUVnormalizeData"; version="1.1.0"; sha256="002q9rc6d0cr6gip9irlafi67ds4jlvxfnil2if30aw4h6l4apkn"; depends=[Biobase]; };
RcisTarget_hg19_motifDBs_cisbpOnly_500bp = derive2 { name="RcisTarget.hg19.motifDBs.cisbpOnly.500bp"; version="1.1.1"; sha256="08p1r5vpz92i7nmgdjsp0i5wzypb46lsdnlykci21nzf9ip12mc9"; depends=[data_table]; };
RegParallel = derive2 { name="RegParallel"; version="0.99.9"; sha256="0n0qyiz2bqw5wi35f8rszrx668dl6hqw054lqakb2dpfpjlzz57y"; depends=[arm data_table doParallel foreach iterators MASS stringr survival]; };
RforProteomics = derive2 { name="RforProteomics"; version="1.19.4"; sha256="1mm1cfsazajkhaim4grz2zi7ar4x2ljn5vq4rlv20gra3d4b82ca"; depends=[BiocManager biocViews MSnbase R_utils shiny]; };
RnBeads_hg19 = derive2 { name="RnBeads.hg19"; version="1.13.1"; sha256="1l3za4hbrg38p9sh38qsj17hgg03cbgqga4zg0c4lcipifrpbbfj"; depends=[GenomicRanges]; };
RnBeads_hg38 = derive2 { name="RnBeads.hg38"; version="1.13.0"; sha256="1wyy4m3p40i12hlwvz9ixqps8i4d5703gl0pcgl4i2485d78yv9v"; depends=[GenomicRanges]; };
RnBeads_mm10 = derive2 { name="RnBeads.mm10"; version="1.13.0"; sha256="1kjvy1v0dbdm959cmsf2d5mnrbnisjpff12wl5gn44n2cg7bb65g"; depends=[GenomicRanges]; };
RnBeads_mm9 = derive2 { name="RnBeads.mm9"; version="1.13.0"; sha256="1s1iy8x1x53ny1pyfgwwkiwc3jpjhdkcd9vpwyv2ix5g22jf8ag7"; depends=[GenomicRanges]; };
RnBeads_rn5 = derive2 { name="RnBeads.rn5"; version="1.13.0"; sha256="1pp9y94rdk5wwapc4jbvs35x1z2agv4xvzxy3fl3h7hp22gaqr9p"; depends=[GenomicRanges]; };
RnaSeqSampleSizeData = derive2 { name="RnaSeqSampleSizeData"; version="1.13.1"; sha256="1cqannbgpr0s9qr1cx4d23rwjy6k63x25khdr7qx5939chz0r21a"; depends=[edgeR]; };
SCLCBam = derive2 { name="SCLCBam"; version="1.13.1"; sha256="1b6da5i20w7w08jv3s2xdpp71qf7y1nxyv3qj3fz5jkw2aavds5f"; depends=[]; };
SNAData = derive2 { name="SNAData"; version="1.27.0"; sha256="182pramjd14g1p0aawcjrv51xlyqkp9mhm84v3gnd9gnmkb69b31"; depends=[graph]; };
SNAGEEdata = derive2 { name="SNAGEEdata"; version="1.17.0"; sha256="15l23gw5ckxgr6pscl07jqwb1lz58g5893wnlzz4zpk3sd46d2p6"; depends=[]; };
SNPhoodData = derive2 { name="SNPhoodData"; version="1.11.0"; sha256="1zm0zhf2987hls15b47jv6krn1cc8kp6jm64k4wqhp4dsjxwbaqd"; depends=[]; };
SVM2CRMdata = derive2 { name="SVM2CRMdata"; version="1.13.0"; sha256="0qhkhnxrcy5i7cs4cl5axc8y9dbzhzfl00c17qp9r4bf8292xf1d"; depends=[]; };
Single_mTEC_Transcriptomes = derive2 { name="Single.mTEC.Transcriptomes"; version="1.9.0"; sha256="1xnsilyjls3s048kl1jwqcs6sb4r33khga0z2zipsgk6aqnx81cc"; depends=[]; };
SomatiCAData = derive2 { name="SomatiCAData"; version="1.19.0"; sha256="0aj84aljp7ih849qnyhmsibnsvg7cshj7xah67xhn5grzwk7v9hi"; depends=[]; };
SomaticCancerAlterations = derive2 { name="SomaticCancerAlterations"; version="1.17.0"; sha256="0bprp4cddjf9zlhv38q5y08zrzizqaxj4338wbzjq1ypnjyip2qj"; depends=[exomeCopy GenomicRanges IRanges S4Vectors stringr]; };
SpikeIn = derive2 { name="SpikeIn"; version="1.23.0"; sha256="1yjlljcy1wnxkxrcxaw26f96vkyvhqh9zq52l9s8d7gnrsfj44ak"; depends=[affy]; };
SpikeInSubset = derive2 { name="SpikeInSubset"; version="1.21.0"; sha256="1z6fbq2z2ry2v3sv48n20c07bi96gb1nfg81g5ylh4q7w79g8lvf"; depends=[affy Biobase]; };
TBX20BamSubset = derive2 { name="TBX20BamSubset"; version="1.17.0"; sha256="15521vpi6h1ydl8vw43h0plrgy7baj5bprzg8rs50yxgkphh9nns"; depends=[Rsamtools xtable]; };
TCGAMethylation450k = derive2 { name="TCGAMethylation450k"; version="1.17.0"; sha256="090y4vyipnlxxg78yxva7q5y81gawfpmkgjrsqiqr1smfalvx9yw"; depends=[]; };
TCGAWorkflowData = derive2 { name="TCGAWorkflowData"; version="1.5.0"; sha256="0kbab7fjy7waq5r6k2w0c8x811xd62v39p17acd5gk8gbw9gy919"; depends=[SummarizedExperiment]; };
TCGAbiolinksGUI_data = derive2 { name="TCGAbiolinksGUI.data"; version="1.1.1"; sha256="0lg2xmf9crcd3328sikjynicrapm32ffq8ay9p0r484rx0m5yvbp"; depends=[]; };
TCGAcrcmRNA = derive2 { name="TCGAcrcmRNA"; version="1.1.0"; sha256="160gj5q4n08l3llfqd0iim2054v8jd3a2pvvd7454amangnrrjd1"; depends=[Biobase]; };
TCGAcrcmiRNA = derive2 { name="TCGAcrcmiRNA"; version="1.1.0"; sha256="1njy5ab0a8p97gi8ci0bad1byl5k42a5shjrss8z9k3a0n9jzpxm"; depends=[Biobase]; };
TENxBrainData = derive2 { name="TENxBrainData"; version="1.1.2"; sha256="1m4cajmp1h5mahlxbvyfvslqq3yfbcy8k46m5p0b73phvnw44846"; depends=[AnnotationHub ExperimentHub HDF5Array SingleCellExperiment]; };
TENxPBMCData = derive2 { name="TENxPBMCData"; version="0.99.3"; sha256="00xjm8xr5f1dzghmr6p3mcjcir6a81gd99kgzznj5k90assggr45"; depends=[AnnotationHub ExperimentHub HDF5Array SingleCellExperiment]; };
TabulaMurisData = derive2 { name="TabulaMurisData"; version="0.99.2"; sha256="185y3cxdkgj4gl4ai0nc0684nz357qscfsah559wdvvvqny25dmk"; depends=[ExperimentHub]; };
TargetScoreData = derive2 { name="TargetScoreData"; version="1.17.0"; sha256="12bmw3qmkw9blmr5ikgx0qyfv1x6hda8d41fiy8gsb74fa4nifsv"; depends=[]; };
TargetSearchData = derive2 { name="TargetSearchData"; version="1.19.1"; sha256="1hwfqsz1rivqq14x5z9d8nphxajfxhm70mgbi0pjzlzsravg487w"; depends=[]; };
TimerQuant = derive2 { name="TimerQuant"; version="1.11.0"; sha256="1a49jaxgjhwl756a7wijswa90z03fz61ffp6w5h00v9qfzgnyf79"; depends=[deSolve dplyr ggplot2 gridExtra locfit shiny]; };
VariantToolsData = derive2 { name="VariantToolsData"; version="1.5.0"; sha256="1kkz3zvba4mc237pxwj6z0c2jvbrgfaz3n5vm55bz6j47aas3i4j"; depends=[BiocGenerics GenomicRanges VariantAnnotation]; };
WES_1KG_WUGSC = derive2 { name="WES.1KG.WUGSC"; version="1.13.0"; sha256="0f3llqwkc5d4av47871d45lfqghmncww9g5rgf58pydrnw7n93xv"; depends=[]; };
XhybCasneuf = derive2 { name="XhybCasneuf"; version="1.19.0"; sha256="1kac43fvng1pwa8hlbivd8pxan7agp9csp0nmh062x4kwamny3hm"; depends=[affy ath1121501cdf RColorBrewer tinesath1cdf]; };
affycompData = derive2 { name="affycompData"; version="1.19.0"; sha256="14ss2b854dj36rzhx1z854r5hkxy0yqzlm5k0690gn5bwlah6rk6"; depends=[affycomp Biobase]; };
affydata = derive2 { name="affydata"; version="1.29.0"; sha256="0sv5q59xfvlyk97ihki5sqdzy9nldjccxiscx3ii1xpp4xk44i3c"; depends=[affy]; };
airway = derive2 { name="airway"; version="1.1.0"; sha256="0daywdjalqbqx6gxrg4fwiasa62h9jh8ibg9kh0vrd35mdazh7b4"; depends=[SummarizedExperiment]; };
allenpvc = derive2 { name="allenpvc"; version="0.99.2"; sha256="04f6y2zk7c8prk22yl15qp9xf81dickn2ida8b5jdhzby6a4p1d1"; depends=[AnnotationHub ExperimentHub SingleCellExperiment]; };
alpineData = derive2 { name="alpineData"; version="1.7.1"; sha256="1gdj474nc2s92i2m1f02ganr5vsv93315mk3dqdyyk05xr9banbw"; depends=[AnnotationHub ExperimentHub GenomicAlignments]; };
antiProfilesData = derive2 { name="antiProfilesData"; version="1.17.0"; sha256="0wyjfc02wm5x5d61fs6cs7g3s0j4aibpqkdiwx0d8cbbkl38ih3f"; depends=[Biobase]; };
aracne_networks = derive2 { name="aracne.networks"; version="1.7.0"; sha256="1acngnqvg7vl402yfcw65rqs27a7sncl1xfz2893abfli2ccpbzx"; depends=[viper]; };
bcellViper = derive2 { name="bcellViper"; version="1.17.0"; sha256="0rzzj4pla57z9825jcs2kx177xrcqfnh7jai41m8dwfxln6ccz25"; depends=[Biobase]; };
beadarrayExampleData = derive2 { name="beadarrayExampleData"; version="1.19.0"; sha256="13g7p6jrg9qa43zv8nhkgfz2pq7b3v6chgqmydyyz25q6jy28iqp"; depends=[beadarray Biobase]; };
beta7 = derive2 { name="beta7"; version="1.19.0"; sha256="1gd1l8rh73k27sm1cjfy9rmsplrkji3zhzrzcldjmaaixl5nfjql"; depends=[marray]; };
biotmleData = derive2 { name="biotmleData"; version="1.5.0"; sha256="0ccx398761qdnnsrjwrrg6qjrq01fv88999f2llyq9gpd3f43lgs"; depends=[]; };
bladderbatch = derive2 { name="bladderbatch"; version="1.19.0"; sha256="0n9vwbj8cii67rhxvb1ps72k99rv251zcdr4w3r1jkbvcd61nvh0"; depends=[Biobase]; };
blimaTestingData = derive2 { name="blimaTestingData"; version="1.1.0"; sha256="0r51zz7kh16zgadr2vzgrm5fywfs03mk2jk5qywb27agqbw5y40s"; depends=[]; };
brainImageRdata = derive2 { name="brainImageRdata"; version="0.99.6"; sha256="0wbj8y1qskc23gqdwc815racv7kqplmh1v12y5y094fcgs6cq62p"; depends=[ExperimentHub]; };
breakpointRdata = derive2 { name="breakpointRdata"; version="0.99.2"; sha256="13mfnd2ms1fnk6zmyz8l10qw8xhfmb8qjyc2r7hn1qmap6ld578f"; depends=[]; };
breastCancerMAINZ = derive2 { name="breastCancerMAINZ"; version="1.19.0"; sha256="0pn48n81vx2wq425q5wnga6n32apgajk0bwq78ri983plh7ik2b1"; depends=[]; };
breastCancerNKI = derive2 { name="breastCancerNKI"; version="1.19.0"; sha256="0b6z16m6kqkd8rfrdvjp6p4fbqs78s25fbiswnw0k8jzvz5yw5x7"; depends=[]; };
breastCancerTRANSBIG = derive2 { name="breastCancerTRANSBIG"; version="1.19.0"; sha256="0slagz3x2q1qykvjcfnh7k3ggpn2g34j4iqvnv7j3mdcc085hn1d"; depends=[]; };
breastCancerUNT = derive2 { name="breastCancerUNT"; version="1.19.0"; sha256="0470r0i59phz2rcnmi0sb2hvw87nvm5dq6s4dj6s6z5mn85g8hd4"; depends=[]; };
breastCancerUPP = derive2 { name="breastCancerUPP"; version="1.19.0"; sha256="0qgz0dsds0xd8d6assqd0715zfyk2y92251m3zq108ndqh5gn4bm"; depends=[]; };
breastCancerVDX = derive2 { name="breastCancerVDX"; version="1.19.0"; sha256="0ma62g72md7is365pbnqbdskacxqvvcnc65jzv8b7g1dwvayswp6"; depends=[]; };
brgedata = derive2 { name="brgedata"; version="1.3.0"; sha256="0w9h12ns984h6k5zhz2x9ria4fa1wxp3k04f6qg5k1zw20v4q2d6"; depends=[Biobase SummarizedExperiment]; };
bronchialIL13 = derive2 { name="bronchialIL13"; version="1.19.0"; sha256="1jg9jz03ab3fki6g293c0jclk8cfpj9qb6yzzskdpcz99xmhs2xv"; depends=[affy]; };
bsseqData = derive2 { name="bsseqData"; version="0.19.1"; sha256="0gqwyx0l0xmd2aa46shq4kr11nfi1imj2pwfjc9026r47af5b84h"; depends=[bsseq]; };
cMap2data = derive2 { name="cMap2data"; version="1.17.0"; sha256="11973w3gjz0qayxacx41mlbf4ji345js8jgjkn2aba0ahnyzb6vw"; depends=[]; };
cancerdata = derive2 { name="cancerdata"; version="1.19.0"; sha256="02zi60lh6jsg6hlyyq6wzg9lzxjr8m9418kywlk3x3c6kkgkrh69"; depends=[Biobase]; };
ccTutorial = derive2 { name="ccTutorial"; version="1.19.3"; sha256="1bghwfpdm2xzh6w1z2pinv9wxy3f5vx8aabyl5vj9smfmplgcmxx"; depends=[affy Biobase Ringo topGO]; };
ccdata = derive2 { name="ccdata"; version="1.7.0"; sha256="1vdsldxl1xnjdi9ai346a1zx9jp6kw33884vwwy86xmj7799j3y1"; depends=[]; };
celarefData = derive2 { name="celarefData"; version="0.99.0"; sha256="118rdgkz4vlhk5n5c683sl28xsjqds6m08w3nfsw8z7ki6kng9sx"; depends=[]; };
ceu1kg = derive2 { name="ceu1kg"; version="0.19.0"; sha256="0vs60mflfc1pnc7s725wsyq2jrj44jrvxwzpw4bhlj0qbs602s8l"; depends=[Biobase GGBase GGtools]; };
ceu1kgv = derive2 { name="ceu1kgv"; version="0.23.0"; sha256="10jnbc8y386racq3ac1hf1dp76wvzlfm8p66c94pk3f2m0w45psv"; depends=[Biobase GGBase]; };
ceuhm3 = derive2 { name="ceuhm3"; version="0.19.0"; sha256="1qdp85ps5xrlx1pl769j91aig2rgxcix4pdzrsa249nyyq1avdym"; depends=[Biobase GGBase GGtools]; };
cgdv17 = derive2 { name="cgdv17"; version="0.19.0"; sha256="1n67nx1har6mswv5p2cb1xfrawkkhzrzxy7fpc6091yy3ypw1s5w"; depends=[Biobase BiocGenerics GenomicRanges IRanges S4Vectors VariantAnnotation]; };
charmData = derive2 { name="charmData"; version="1.17.0"; sha256="0hgac6z9k3frw648479jf8m6n2wlljhln7n8y13lbsdv5wakln87"; depends=[charm pd_charm_hg18_example]; };
chipenrich_data = derive2 { name="chipenrich.data"; version="2.5.0"; sha256="0j9zdc0xrxi7vjyl3dzkvr8g24cxc1kcvw52vplrd5njyyka5vw1"; depends=[AnnotationDbi BiocGenerics GenomeInfoDb GenomicRanges IRanges readr rtracklayer S4Vectors]; };
chromstaRData = derive2 { name="chromstaRData"; version="1.7.0"; sha256="0arxcqr1yrs00i7a8xncprixzm8lc8ljrbh371ckjdr7641g63gq"; depends=[]; };
cnvGSAdata = derive2 { name="cnvGSAdata"; version="1.17.0"; sha256="1inxvj6sfl7n3cxzswkllbjbjwz0rm803hkycy4wxcsq7416sj21"; depends=[cnvGSA]; };
colonCA = derive2 { name="colonCA"; version="1.23.0"; sha256="1mm0zb003izia6j502n4m91vad6iz3ymf8nn4f9wlj20di66fvx6"; depends=[Biobase]; };
curatedBladderData = derive2 { name="curatedBladderData"; version="1.17.0"; sha256="14xwq55g83pvwyxm7kl6hq9c4j2bd6vp63afir619d5binl6i7ln"; depends=[affy]; };
curatedBreastData = derive2 { name="curatedBreastData"; version="2.9.0"; sha256="024sx3am50vsaaixmj8gfp3f905rf7g7qyn47sdakpv6sx48k1zl"; depends=[Biobase BiocStyle ggplot2 impute XML]; };
curatedCRCData = derive2 { name="curatedCRCData"; version="2.13.0"; sha256="1f6m6sllbxzca27lwyvav2d4si65w7fs9mh4mksw2sn8n8x5452v"; depends=[BiocGenerics nlme]; };
curatedMetagenomicData = derive2 { name="curatedMetagenomicData"; version="1.11.5"; sha256="1rcznh6h7vrwicf545jfxabrjwqf1npxqpp6hdfnf5bylkfrc1d9"; depends=[AnnotationHub Biobase dplyr ExperimentHub magrittr S4Vectors tidyr]; };
curatedOvarianData = derive2 { name="curatedOvarianData"; version="1.19.0"; sha256="0yvc1kpy4ql2sd467dggi6kpwxrvvqyasr0mgc61s1snmakvm06y"; depends=[affy BiocGenerics]; };
curatedTCGAData = derive2 { name="curatedTCGAData"; version="1.3.5"; sha256="01m4kld5cp0ff5wlwk2wln15vyjxgahzbk3xkzlg81yvs67ai2vr"; depends=[AnnotationHub ExperimentHub MultiAssayExperiment S4Vectors]; };
davidTiling = derive2 { name="davidTiling"; version="1.21.0"; sha256="18ivz1z0il8s9sk6c5mzgipsbs8xswbq7swwm422ji1yp75lkd9p"; depends=[Biobase GO_db tilingArray]; };
derfinderData = derive2 { name="derfinderData"; version="1.99.0"; sha256="1dv6j91c9xs19pynza54gs127qqf5xk66rwin6rby0dcv58ng6s4"; depends=[]; };
diffloopdata = derive2 { name="diffloopdata"; version="1.9.0"; sha256="12a5338djyhg94q7wdahij4c9dnrx5qx04a1g9304wpk5z6cmxni"; depends=[]; };
diggitdata = derive2 { name="diggitdata"; version="1.13.0"; sha256="09b1mk68mg3jqf63c54xdh805vd79hbnnh02rf6qb3pq6w9b6z64"; depends=[Biobase viper]; };
dressCheck = derive2 { name="dressCheck"; version="0.19.0"; sha256="0k3h5i86345xx0d31qim1d1aw25axwy48hiq717fbnz2mpwsggj7"; depends=[Biobase]; };
dsQTL = derive2 { name="dsQTL"; version="0.19.0"; sha256="0lwgnkvzpipqnzfh3vlqgk568ys1bqjyfih97c7vb8mn57i100fz"; depends=[Biobase GGBase SummarizedExperiment]; };
dyebiasexamples = derive2 { name="dyebiasexamples"; version="1.21.0"; sha256="0k99wgjm4a7mjs76p48mwfp2y17xn4r2bral2c1hbyj2y4bl1ycz"; depends=[GEOquery marray]; };
ecoliLeucine = derive2 { name="ecoliLeucine"; version="1.21.0"; sha256="1pbindvfhr7lf01r0kncp23f6jxlwmkd362mix2gw2g006a83y4f"; depends=[affy ecolicdf]; };
estrogen = derive2 { name="estrogen"; version="1.27.0"; sha256="1m0q2k6p6ydp7ykqwi9a079knxmp14xlrpcwncklsapibcvyz8lr"; depends=[]; };
etec16s = derive2 { name="etec16s"; version="1.9.0"; sha256="0ljn90gf4sm7615xw25dil15kgf81gl0hvbp24snx4nbflnhns4q"; depends=[Biobase metagenomeSeq]; };
faahKO = derive2 { name="faahKO"; version="1.21.0"; sha256="19dxcf3yfgy8h8xn76h7x2ihvgy90923a28j3b2k972r84zzy7gk"; depends=[xcms]; };
fabiaData = derive2 { name="fabiaData"; version="1.19.0"; sha256="104c70pp9cnkx3y2mm6yxj4vj6k2mqrhw1n2cibhxnnqnl2lnwnr"; depends=[Biobase]; };
facopy_annot = derive2 { name="facopy.annot"; version="1.1.0"; sha256="0snc9v8jy3dnxidk7g9lppxcp35flgdgp132sap8qkh6d1qc2rwd"; depends=[]; };
facsDorit = derive2 { name="facsDorit"; version="1.23.0"; sha256="0xxdz1xfb661pnrqji6vxsmmr90h1v1i195k9gb4dll6hwbq0n11"; depends=[prada]; };
ffpeExampleData = derive2 { name="ffpeExampleData"; version="1.19.0"; sha256="0jjaj492k4akc30yvr4q8y31wdi152iq5s3pl5i10sl9xrbg80hj"; depends=[lumi]; };
fibroEset = derive2 { name="fibroEset"; version="1.23.0"; sha256="1g22av8zj4nq9prnps7zgrzvva9d5a6h016llg0brpf9qjpg58p3"; depends=[Biobase]; };
fission = derive2 { name="fission"; version="1.1.0"; sha256="04rwbx0dd6fjyg76jw62vimllq40lb432bzmpf051x9gjqfyx0v2"; depends=[SummarizedExperiment]; };
flowFitExampleData = derive2 { name="flowFitExampleData"; version="1.17.0"; sha256="1ahg5g9ypxbhm7jrsbq1hjk5r5fmgvirawfd2xqfiaw5x9pkmrai"; depends=[flowCore]; };
flowPloidyData = derive2 { name="flowPloidyData"; version="1.7.0"; sha256="0f3cnq2s215a6wrz2cbp90219smvhr4zsvl02wbd40xb8902zhdc"; depends=[]; };
flowQBData = derive2 { name="flowQBData"; version="1.7.0"; sha256="1xla98i06j1qi2w88x1v8agvqcljzwxfcxakw0fl6phwl07hz9na"; depends=[]; };
flowWorkspaceData = derive2 { name="flowWorkspaceData"; version="2.17.0"; sha256="058q46w84jd7rf50pn26fiyh1n312jvxbcdrm5i2mmzg358hrr6y"; depends=[]; };
frmaExampleData = derive2 { name="frmaExampleData"; version="1.17.0"; sha256="10lr219ghj409himn3g080s5saln3k355x9jhrk9fx69r8g127d7"; depends=[]; };
furrowSeg = derive2 { name="furrowSeg"; version="1.9.0"; sha256="1a4gwrbqliz3cwn9iqwsn27qhmq9l3rh9k59ca94vsjmkrqx7bjk"; depends=[abind dplyr EBImage locfit tiff]; };
gageData = derive2 { name="gageData"; version="2.19.0"; sha256="1zrps414095nkc49f90a7f8zy224ll60dm6b46sfkajd35bprafj"; depends=[]; };
gaschYHS = derive2 { name="gaschYHS"; version="1.19.0"; sha256="0alxcrnk8kyjrs73idgihwvz42hbn4d6laayl849rzcna1fp48sp"; depends=[Biobase]; };
gatingMLData = derive2 { name="gatingMLData"; version="2.21.0"; sha256="16gwgign7bq4yccq36wav2w8xl193c6aca6bgh9l8fv0z0rdgxnv"; depends=[]; };
gcspikelite = derive2 { name="gcspikelite"; version="1.19.0"; sha256="197lx2a6jlsrv5bg3ih28maikyb8jk91krifk80xys3yfhp9dhyb"; depends=[]; };
geneLenDataBase = derive2 { name="geneLenDataBase"; version="1.17.0"; sha256="0qxdhn5is2d47iv01z7in8gd3s2dzrgir8s8j4611f7sgy9s9px4"; depends=[GenomicFeatures rtracklayer]; };
genomationData = derive2 { name="genomationData"; version="1.13.0"; sha256="02fq74q6vkraivdrka8l0hascvsxg2ys6p40774vjhrhrcvmnfkm"; depends=[]; };
geuvPack = derive2 { name="geuvPack"; version="1.13.0"; sha256="07h53q19zg89rvzjk3aqgp52gynlxg5frxm5h2q3q5ihidp118cr"; depends=[SummarizedExperiment]; };
geuvStore2 = derive2 { name="geuvStore2"; version="1.11.0"; sha256="1ggac70x9pblbnzm6wg6rpmbgrkf802b2vgnfah1516grx0dwrkd"; depends=[BatchJobs GenomicRanges gQTLBase]; };
golubEsets = derive2 { name="golubEsets"; version="1.23.0"; sha256="1h45rwz6z4wgibbyafv8946vfs303km7ixcradml4ymbpwibp4ib"; depends=[Biobase]; };
grndata = derive2 { name="grndata"; version="1.13.0"; sha256="1ybgk5nf9nqrmw4mchpf183zyik6szzsm2cxh619fv27f0i3hjzk"; depends=[]; };
gskb = derive2 { name="gskb"; version="1.13.1"; sha256="1jpl7vm2r28bf70mv2sy0dkdn6yn27w96ja2a0yynbpd509v8fwg"; depends=[]; };
h5vcData = derive2 { name="h5vcData"; version="2.1.0"; sha256="036bvqd8glpk2armbv42wxv28k6rqg301l7i04wp85d94ipgn6yk"; depends=[]; };
hapmap100khind = derive2 { name="hapmap100khind"; version="1.23.0"; sha256="07r1nsl92awkkw41midkb9iv4c93my7c222li2f4mym8hn4ahn8p"; depends=[]; };
hapmap100kxba = derive2 { name="hapmap100kxba"; version="1.23.0"; sha256="0dvb3b2ls7g66vsv9qzl29kkjmdd6mwrhqxzj0a1d7qnkg48kgy1"; depends=[]; };
hapmap500knsp = derive2 { name="hapmap500knsp"; version="1.23.0"; sha256="0jqyvd1khz84l1qw31xk2szb9ycsp76yrs1h81ahg64sslygnfg0"; depends=[]; };
hapmap500ksty = derive2 { name="hapmap500ksty"; version="1.23.0"; sha256="128p97qmp7br5vwmn934akkh0h4xgirpzc4q7kaxh3w211rch7rm"; depends=[]; };
hapmapsnp5 = derive2 { name="hapmapsnp5"; version="1.23.0"; sha256="0a1n93nin8hpqh0qswbl9phlwgllam0xxpa2qxr63dyd5k1liwz6"; depends=[]; };
hapmapsnp6 = derive2 { name="hapmapsnp6"; version="1.23.0"; sha256="1m17r4va3vbiml0avlb7xp2qhh82vig934h3gpmz9190hy6ikds4"; depends=[]; };
harbChIP = derive2 { name="harbChIP"; version="1.19.0"; sha256="1566kxfblk6z4dia4f3gl3v0dsz8lx343nlflbp2wfb6gd314dl6"; depends=[Biobase Biostrings IRanges]; };
healthyFlowData = derive2 { name="healthyFlowData"; version="1.19.0"; sha256="052kvg8gvfbqc4fpr8np1q9li7f52daq1rndpg7zmc5zn4nqjzrn"; depends=[flowCore]; };
hgu133abarcodevecs = derive2 { name="hgu133abarcodevecs"; version="1.19.0"; sha256="1c113f0aj51mdvdizi6m2wmm0v7zxsa3pkp3bjq2426v449qr3ls"; depends=[]; };
hgu133plus2CellScore = derive2 { name="hgu133plus2CellScore"; version="1.1.1"; sha256="1h1n76j6l0nqqf18a5w5c8vmjd579jdh2ix84j70s30nkzbyxhyw"; depends=[Biobase]; };
hgu133plus2barcodevecs = derive2 { name="hgu133plus2barcodevecs"; version="1.19.0"; sha256="005llh7vpfc01qbq1wnq1nribqgh1kj7mw0rz59dsmr92czm7lbi"; depends=[]; };
hgu2beta7 = derive2 { name="hgu2beta7"; version="1.21.0"; sha256="1d80nxbf8ffmh7ipvxw2smvhgq4xvjhnhmwpwmkwn30yghrm46wj"; depends=[]; };
hmyriB36 = derive2 { name="hmyriB36"; version="1.17.0"; sha256="1s1gsysv8wsk9fzd34fjw2rp6jk8nysg1wd6dhay5mqphv92abkh"; depends=[Biobase GGBase]; };
humanStemCell = derive2 { name="humanStemCell"; version="0.21.0"; sha256="02y71ydwlygn6yickjx3gjsmrhp6dnvqk5319is70gwd214466r1"; depends=[Biobase hgu133plus2_db]; };
iontreeData = derive2 { name="iontreeData"; version="1.17.2"; sha256="1y3jawc5rs1fhv90yygkjghp1ir4zw540hi2ncml4lm003d42ghq"; depends=[]; };
kidpack = derive2 { name="kidpack"; version="1.23.0"; sha256="1ib24nbvqgids10k1glvpswavnv0qd14nvx9bw13bk09vndagkyi"; depends=[Biobase]; };
leeBamViews = derive2 { name="leeBamViews"; version="1.17.0"; sha256="1mldlpdpnivfi60rnsbz7466jf9ssyfgb2xv9ipwc8nlmszd6g45"; depends=[Biobase BSgenome GenomicAlignments GenomicRanges Rsamtools]; };
leukemiasEset = derive2 { name="leukemiasEset"; version="1.17.0"; sha256="15c31vzfn83pfjj8bmvg4sl0hynlvaz2wcg3fzlxmlpbf6b5rqd7"; depends=[Biobase]; };
lumiBarnes = derive2 { name="lumiBarnes"; version="1.21.0"; sha256="043w39jdc35pgblprh2p4crpxcix39ya9kg3g4q8dcajasr13dag"; depends=[Biobase lumi]; };
lungExpression = derive2 { name="lungExpression"; version="0.19.0"; sha256="1rbbkjv3vjrk6d22k7msnq124y47a8pb4vdf388f1a8j9403jfpi"; depends=[Biobase]; };
lydata = derive2 { name="lydata"; version="1.7.0"; sha256="0lq17l0klsn081m2nd9hrx50nxksvf7186drby66qvq6bhw3vhms"; depends=[]; };
mAPKLData = derive2 { name="mAPKLData"; version="1.13.0"; sha256="1h4x00a7rziqm3cqkddpp7ahrb36045yq71lskdjyp43k066jplw"; depends=[]; };
mCSEAdata = derive2 { name="mCSEAdata"; version="1.1.0"; sha256="0rcfyk6mwlxgkk7q40djbcbd4kx4vyy79h6dxb37zd7mpzxj03nx"; depends=[]; };
mammaPrintData = derive2 { name="mammaPrintData"; version="1.17.2"; sha256="0015cz3czxzzrx7ba8lqr1a5i4nh1mns114br660y9d32j1nsw0f"; depends=[]; };
maqcExpression4plex = derive2 { name="maqcExpression4plex"; version="1.25.0"; sha256="14m82492wb7jmqwjllnqak9rivyky1prcqgp1yn0g05c406fj0r9"; depends=[]; };
mcsurvdata = derive2 { name="mcsurvdata"; version="0.99.4"; sha256="0kv2gq9vr0z2sg8v7mv0ky66gvwf2hbaisw2g02a81bzhjvyjky8"; depends=[AnnotationHub Biobase ExperimentHub]; };
metaMSdata = derive2 { name="metaMSdata"; version="1.17.0"; sha256="0j6h0s75w50jp3lcfs5cilqaqhhinlfn9c6zlpki6906fj1q6dxx"; depends=[]; };
methyvimData = derive2 { name="methyvimData"; version="1.3.0"; sha256="0jacj9jyqs5x11xds6bindab6q96br95r37dxmgxw5gxl9lcn6ql"; depends=[minfi]; };
miRNATarget = derive2 { name="miRNATarget"; version="1.19.0"; sha256="05x4vl8x2brm3bj04kddzcqjnm72jw29prmcwr1ildbaadmzh3fg"; depends=[Biobase]; };
miRcompData = derive2 { name="miRcompData"; version="1.11.0"; sha256="1qgzplmv16anh7c760nf51fh671z0lmxqmkn0qfmj55d54gfgfmh"; depends=[]; };
microRNAome = derive2 { name="microRNAome"; version="1.3.0"; sha256="0hbs64bhd129cq098y5ijf6q2nvn2w382d29isws92q1ln12r36b"; depends=[SummarizedExperiment]; };
minfiData = derive2 { name="minfiData"; version="0.27.0"; sha256="1h7mb52p73bw66rxwjjfmaan6scs9pc6rj2f9wb5hx9hddwz5xy4"; depends=[IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest minfi]; };
minfiDataEPIC = derive2 { name="minfiDataEPIC"; version="1.7.0"; sha256="119sr9yb82dlcjgddlqwzgn72c7zghz26kzdda48s9zxlf31f9yp"; depends=[IlluminaHumanMethylationEPICanno_ilm10b2_hg19 IlluminaHumanMethylationEPICmanifest minfi]; };
minionSummaryData = derive2 { name="minionSummaryData"; version="1.11.0"; sha256="1i5ilakb9a4w7zf4zwymmpxyqn8s4y7295gdw2spgafgny0ayvag"; depends=[]; };
mitoODEdata = derive2 { name="mitoODEdata"; version="1.17.0"; sha256="1pabl518xj88hlpfdqsbg2178ac2in11ma3y0syvq7wr2nqdqj6s"; depends=[]; };
mosaicsExample = derive2 { name="mosaicsExample"; version="1.19.0"; sha256="17xvlaxlw6jn7w81dyg74n84nny6apaxv8b7qbv7gcyil3h2xr7f"; depends=[]; };
mouse4302barcodevecs = derive2 { name="mouse4302barcodevecs"; version="1.19.0"; sha256="1y7vkiqp4mkf16mpl5yl1jzmh1fv67d6k4i8qfi1lm68q2av9ggv"; depends=[]; };
msPurityData = derive2 { name="msPurityData"; version="1.9.0"; sha256="0z7gs75bci301mhhp9j8lxpivjns2bmr51vsz04d4k308j19w1wv"; depends=[]; };
msd16s = derive2 { name="msd16s"; version="1.1.0"; sha256="09zjzad3blq6i1m6fnkfjpllnvjn9vlrlc075gcm2gpwcx4w775a"; depends=[Biobase metagenomeSeq]; };
msdata = derive2 { name="msdata"; version="0.21.0"; sha256="1srm1djnzfrj6klzxm2s721glk75lakb2428arqn3bm8vzvqw5vy"; depends=[]; };
msqc1 = derive2 { name="msqc1"; version="1.9.1"; sha256="041fz9md3q95p1cwc7bcqam2z555sin2ib7ryssp79hp8iibx50g"; depends=[lattice]; };
mtbls2 = derive2 { name="mtbls2"; version="1.11.0"; sha256="1ismd5yp3vgj1cqp4y92gy5z856bs6sy3fgbigjjba2rrb3m4k1z"; depends=[]; };
mvoutData = derive2 { name="mvoutData"; version="1.17.0"; sha256="13kakn04xrngx9m80m1gqwdx3f75qixy6h9y0jvh16jk49kdnxcd"; depends=[affy Biobase lumi]; };
pRolocdata = derive2 { name="pRolocdata"; version="1.19.5"; sha256="0gci5k1wxmnwy76nhnpjm9hysxpzjz29xw8j8srp96zn1bskaayi"; depends=[Biobase MSnbase]; };
parathyroidSE = derive2 { name="parathyroidSE"; version="1.19.0"; sha256="1dmnm348yxa9p6lnia4iiil1s4jkxj1n83frhml06brnqymbb9wn"; depends=[SummarizedExperiment]; };
pasilla = derive2 { name="pasilla"; version="1.9.0"; sha256="09rzh3w8nki9gqsk3pznk867ipg7s7imz7ma67cl0rh8pz2vg05i"; depends=[]; };
pasillaBamSubset = derive2 { name="pasillaBamSubset"; version="0.19.0"; sha256="0d2b4qav1m0whr7gwn2h2962qd72i3fc0y9c36k6nxr7jyfmv1jj"; depends=[]; };
pathprintGEOData = derive2 { name="pathprintGEOData"; version="1.11.0"; sha256="1s5nilgzs1kgdjaqyq7warfg672qvd14m61bdvl0g12bkab61sv8"; depends=[]; };
pcaGoPromoter_Hs_hg19 = derive2 { name="pcaGoPromoter.Hs.hg19"; version="1.17.0"; sha256="0wwd5cc8ywi5181q8hrxw6jx6pxyrfayfdpw7jzp3nkj8x222d31"; depends=[]; };
pcaGoPromoter_Mm_mm9 = derive2 { name="pcaGoPromoter.Mm.mm9"; version="1.17.0"; sha256="0g5y5nsi99dsx6n1zfjlc6vi4ikmv2l1ba6sbdid9019k79v4495"; depends=[]; };
pcaGoPromoter_Rn_rn4 = derive2 { name="pcaGoPromoter.Rn.rn4"; version="1.17.0"; sha256="1qz6saflpsa9naj536k7ciqks95hb6l1z2v6srclqq7b45465h1b"; depends=[]; };
pcxnData = derive2 { name="pcxnData"; version="2.3.0"; sha256="1whw0wrfq1dfbxpfcz9z749dh27fadxmwp3dln945qh0nrjli6zc"; depends=[]; };
pd_atdschip_tiling = derive2 { name="pd.atdschip.tiling"; version="0.19.0"; sha256="1rfp34332p0fbx9yfb87rlhwwzjy1pm3zf372pvhv1r7qm8w3dyh"; depends=[Biostrings DBI IRanges oligo oligoClasses RSQLite S4Vectors]; };
pepDat = derive2 { name="pepDat"; version="1.1.0"; sha256="0yqlsdzjqwdvjfy7p6rls2xy5bph75pivkvizj575pmagdviv882"; depends=[GenomicRanges]; };
plasFIA = derive2 { name="plasFIA"; version="1.9.0"; sha256="0ivyvrx2wmr9wsi852h3fdkbc8qrxhx1gf21aiazlygz3x796fml"; depends=[proFIA]; };
ppiData = derive2 { name="ppiData"; version="0.19.0"; sha256="0hglfcyzlz7j090qylilqxx9jhivk3ipkq6q0zn2grydrj0g0xib"; depends=[AnnotationDbi graph]; };
prebsdata = derive2 { name="prebsdata"; version="1.17.0"; sha256="1jccx76j7xqbl4660f0akh6bnvhcvpn1wkn2hchbv9w1s9ywy9pi"; depends=[]; };
prostateCancerCamcap = derive2 { name="prostateCancerCamcap"; version="1.9.0"; sha256="0wqm9wbqz15ls55mzvd6kfssix02pn2qaymin6s0b6w2imji85np"; depends=[Biobase]; };
prostateCancerGrasso = derive2 { name="prostateCancerGrasso"; version="1.9.0"; sha256="19r3gb718gll5fx03q1q0471r7fx25iix7ncff6v54pp4lvnjk9q"; depends=[Biobase]; };
prostateCancerStockholm = derive2 { name="prostateCancerStockholm"; version="1.9.0"; sha256="1y9pzi3w2k3fj6lnmlhzh5dvazb7vkqvchm1a6fi3lj3wdqv12lw"; depends=[Biobase]; };
prostateCancerTaylor = derive2 { name="prostateCancerTaylor"; version="1.9.0"; sha256="0pclqc7qzypwd4jvld3dmy43fc5hram1lzcfbdnp4vj8r86mw7il"; depends=[Biobase]; };
prostateCancerVarambally = derive2 { name="prostateCancerVarambally"; version="1.9.0"; sha256="02vg37vllda3yvw6lq7xggil6l3n7v4y37s2cqixqrrmnczzqb2z"; depends=[Biobase]; };
pumadata = derive2 { name="pumadata"; version="2.17.0"; sha256="0ag7kv1k9jaj943l0szxlk2qfx5mlpspwsrnnyxxcpi3s8r8nyn4"; depends=[affy Biobase oligo puma]; };
qPLEXdata = derive2 { name="qPLEXdata"; version="0.99.1"; sha256="05v19rlbskvy15504ys8x3s2hhbdzwnyz3dwjas6h0b7rs3d51p7"; depends=[dplyr knitr MSnbase qPLEXanalyzer]; };
rRDPData = derive2 { name="rRDPData"; version="1.1.0"; sha256="16xk33bry0203sr79lzs89pwzbqds29894fc2hjr9qs624wrzvnk"; depends=[rRDP]; };
rcellminerData = derive2 { name="rcellminerData"; version="2.3.1"; sha256="1i149vpfm873nzykbxf93rkrmyjshri5xi7awmxf60yiwacbafkk"; depends=[Biobase]; };
restfulSEData = derive2 { name="restfulSEData"; version="1.3.0"; sha256="01vbzdx354qpl58lznn9938jn93rf9nikwjfmy1w33z5cmirc7ad"; depends=[ExperimentHub SummarizedExperiment]; };
rheumaticConditionWOLLBOLD = derive2 { name="rheumaticConditionWOLLBOLD"; version="1.19.0"; sha256="1bcn3s36w3asb2di8851wg67dpx3rwalw9php1sklzrbh2f7jazs"; depends=[]; };
sampleClassifierData = derive2 { name="sampleClassifierData"; version="1.5.0"; sha256="06p4cq30diwx5flxc31lw3k6z66y6villf99qq99f4ab5x3gad94"; depends=[SummarizedExperiment]; };
scRNAseq = derive2 { name="scRNAseq"; version="1.7.0"; sha256="15cxr52qakxhsbjnm8vl33qlwbvl3lghkrk4l2v0dih4mw4g65nb"; depends=[SummarizedExperiment]; };
seq2pathway_data = derive2 { name="seq2pathway.data"; version="1.13.0"; sha256="0z9dspkjvjn20q542bjq7xyc7fpy76y3ic01h14cvql42m0vhl53"; depends=[]; };
seqCNA_annot = derive2 { name="seqCNA.annot"; version="1.17.0"; sha256="0hz9vf8fplqm3gfrfiiirm0w6g9x6bjq7l96275aizbx3g6a80kb"; depends=[]; };
seqc = derive2 { name="seqc"; version="1.15.2"; sha256="1bc4ibhb7wr08c794m1ljy3hz4fy0vikavg7g7y6l3rjfvlns7lk"; depends=[Biobase]; };
serumStimulation = derive2 { name="serumStimulation"; version="1.17.0"; sha256="153zq6qpk02mkk31v5sl129j50wiw9n8c7n28f39w0mzg93yjyv5"; depends=[]; };
sesameData = derive2 { name="sesameData"; version="0.99.5"; sha256="0y2xkxrbj5fla75rq4iysa5ckmvv6fnbi06nk372n0gyvi0v5w8d"; depends=[AnnotationHub curl ExperimentHub]; };
seventyGeneData = derive2 { name="seventyGeneData"; version="1.17.3"; sha256="1aq5pzj70alv4kmi79kdyc9v0441gvfgibzf5j06zh6b2bc409x6"; depends=[]; };
shinyMethylData = derive2 { name="shinyMethylData"; version="1.1.0"; sha256="1qd8193vvs22x8hfy70ih2m5gx4s46hd0fas9ann198vv4rhygxz"; depends=[]; };
simpIntLists = derive2 { name="simpIntLists"; version="1.17.0"; sha256="1cgr86ibyz4xmhsrmrr0qx8f1xhclw7q4mrrbr5znvy4nvhbzpz6"; depends=[]; };
stemHypoxia = derive2 { name="stemHypoxia"; version="1.17.0"; sha256="076h70m11z178q1v58rbb1731nskck64sr4w29x1jby8h87rqkvk"; depends=[]; };
stjudem = derive2 { name="stjudem"; version="1.21.0"; sha256="1ccr0zcqwffizqbd624j980kn40hmic2497mj2ws19chwqxaz24j"; depends=[]; };
synapterdata = derive2 { name="synapterdata"; version="1.19.0"; sha256="1yppixbw3pxsaag1zfsd39p78d5l8702ysxxjgnmi50ak0lrwb2w"; depends=[synapter]; };
systemPipeRdata = derive2 { name="systemPipeRdata"; version="1.9.4"; sha256="0k8nybycswz78l0v61nidnirw3i9k41f1150ssglxyhqsvxpn8xd"; depends=[BiocGenerics]; };
tcgaWGBSData_hg19 = derive2 { name="tcgaWGBSData.hg19"; version="0.99.3"; sha256="16p36sailxw14f051c3k89gz2i9blky0vx961s36mmnd5sqn6skn"; depends=[bsseq ExperimentHub knitr]; };
tinesath1cdf = derive2 { name="tinesath1cdf"; version="1.19.0"; sha256="0mpj8j8s9380lf830b862k2rj1mpfa3vflkai5bacwnx9i3dbmnz"; depends=[]; };
tinesath1probe = derive2 { name="tinesath1probe"; version="1.19.0"; sha256="07fyj1vdpzkz8iw6d9bqxgi4482rvq0r945p3rxa5a0cvwcsh1xi"; depends=[AnnotationDbi]; };
tissueTreg = derive2 { name="tissueTreg"; version="1.1.0"; sha256="1whm1a9r5bmrdzqchv7qzgnxnclq1qbzqjv0p6f6d6y7mw3rr6f6"; depends=[]; };
tofsimsData = derive2 { name="tofsimsData"; version="1.9.0"; sha256="17pwxdik4phg1cc10ycp2j38n63l1rfna8pzz16j05858ig24lif"; depends=[]; };
topdownrdata = derive2 { name="topdownrdata"; version="1.3.0"; sha256="095mhjpni166p351k50y0605gb3ydsrhdnf8i92w6q84qnl9dapw"; depends=[topdownr]; };
tweeDEseqCountData = derive2 { name="tweeDEseqCountData"; version="1.19.0"; sha256="1gby12vp7b88h3g86r5r01lj86chs30q505qijv3zq769px7fd2g"; depends=[Biobase]; };
tximportData = derive2 { name="tximportData"; version="1.9.2"; sha256="0j7nwkfrvli8wx3jvrfn1qygvzyzvmzlp5vq529ssqf6mka8i2r3"; depends=[]; };
vulcandata = derive2 { name="vulcandata"; version="1.3.1"; sha256="1jgiryn6cpmbipaif5d5yhwrl692hc6nac5abjip31l0rqmf4qig"; depends=[]; };
waveTilingData = derive2 { name="waveTilingData"; version="1.17.0"; sha256="1w0wvnk4r7vvg9xvqmpmwzbp1sr7plg214d6wgdwgmp9bm785vxf"; depends=[]; };
yeastCC = derive2 { name="yeastCC"; version="1.21.0"; sha256="1kbhbqcab7p3p160xvgwka8gfhxnjl05p9hxb7jjixi4yr30dzvj"; depends=[Biobase]; };
yeastExpData = derive2 { name="yeastExpData"; version="0.27.0"; sha256="13vz99brk9bb10swlrisiiwilyjn6pl1z3arw47sahm7grw4sgpc"; depends=[graph]; };
yeastGSData = derive2 { name="yeastGSData"; version="0.19.0"; sha256="06gnrh6kll5rmdvhigrf7blyyap6dz517gkhx2ljvlbwwz1hd35l"; depends=[]; };
yeastNagalakshmi = derive2 { name="yeastNagalakshmi"; version="1.17.0"; sha256="0xq65383vmh1jnfxnfhrzfdhr5s0qzy0xb844d8lvmsn77mq7jpr"; depends=[]; };
yeastRNASeq = derive2 { name="yeastRNASeq"; version="0.19.0"; sha256="0sy72a0dvqq75hg599nfq6rv9frjwmvzqyissksa4dpbm8n3q086"; depends=[]; };
yri1kgv = derive2 { name="yri1kgv"; version="0.23.0"; sha256="08i7iz0shrhh3pnn88x3fnkpqrics4nq43fcwzkk1582j1spg8yr"; depends=[Biobase GGBase]; };
yriMulti = derive2 { name="yriMulti"; version="0.11.0"; sha256="0gsr2y94hfmjmpz37y7q80wnkhlz8q028qn7dwm15a5rvzvs8ccv"; depends=[dsQTL GenomeInfoDb GenomicFiles GenomicRanges geuvPack gQTLBase Homo_sapiens MultiAssayExperiment SummarizedExperiment VariantAnnotation]; };
zebrafishRNASeq = derive2 { name="zebrafishRNASeq"; version="1.1.0"; sha256="1sfdzs0s0jjrm36v016zf4xbw2rl2gfibzbzvgj7vark30f8w960"; depends=[]; };
ABAData = derive2 { name="ABAData"; version="1.18.0"; sha256="08lzn9342smxr4vidy81rszgcbipk7l8a336g4iym4bc9fa6sspb"; depends=[]; };
ALL = derive2 { name="ALL"; version="1.30.0"; sha256="1gr0r2g6is475bcz7y1h00wr1sklky1d061mc70i7hf1fgdp1a0z"; depends=[Biobase]; };
ALLMLL = derive2 { name="ALLMLL"; version="1.28.0"; sha256="09ly5gas0nw92ibyf1ngcvz78yn4dn3jc321y61jmmchxipb1kjm"; depends=[affy]; };
ARRmData = derive2 { name="ARRmData"; version="1.24.0"; sha256="121x37fnbhplza8ndj04zy04841c5mz2zkfh7645k4sq2qqk4zyg"; depends=[]; };
ASICSdata = derive2 { name="ASICSdata"; version="1.8.0"; sha256="1xg0gbdv8pkbpy0939fxfgbkdmpqzzqbfc14smyr6qjbw7zpbr4k"; depends=[]; };
Affyhgu133A2Expr = derive2 { name="Affyhgu133A2Expr"; version="1.24.0"; sha256="1l03mk6pdz28dzyfid5whn08qkxyfh2dp6b23rsl60ycgb9y41nx"; depends=[]; };
Affyhgu133Plus2Expr = derive2 { name="Affyhgu133Plus2Expr"; version="1.22.0"; sha256="0kkvf5mq223y0drl9xbi7rxxq4v03380mq7ddwpx76jz9vac9gz2"; depends=[]; };
Affyhgu133aExpr = derive2 { name="Affyhgu133aExpr"; version="1.26.0"; sha256="03xpcc9x0rdzndrdb73917iqhs2xfn4x3ixa4bjj048zvbdm4b0y"; depends=[]; };
AffymetrixDataTestFiles = derive2 { name="AffymetrixDataTestFiles"; version="0.26.0"; sha256="18c5ydx45gf16fdimn9bzz6z1w3x41kvcsv9b1hclj0bxsym863k"; depends=[]; };
Affymoe4302Expr = derive2 { name="Affymoe4302Expr"; version="1.26.0"; sha256="14pcmka5ifpmv54mg78gggk8f900absdmwpm0y2qxpv4k19fqr0m"; depends=[]; };
AmpAffyExample = derive2 { name="AmpAffyExample"; version="1.28.0"; sha256="0s079zxd4ik20z5l9zl27zmaxxy0wmc9w4c892mqr1qk8cdp4i74"; depends=[affy]; };
AneuFinderData = derive2 { name="AneuFinderData"; version="1.16.0"; sha256="19nfx345k8hlllfrhs71bvbnzg3lhr9p9lg4z5lr73kqpxfgx1jc"; depends=[]; };
AshkenazimSonChr21 = derive2 { name="AshkenazimSonChr21"; version="1.18.0"; sha256="0ajzzvpamzk6cpdx5js2ccbhk44wmagl3jxr2h48x3p9cklnjb9l"; depends=[]; };
AssessORFData = derive2 { name="AssessORFData"; version="1.6.0"; sha256="1qcv3a8pv3kzdhi2bns7j4jn9mrgfpjh2mrc6q7y1lmgqi53knq8"; depends=[DECIPHER]; };
BeadArrayUseCases = derive2 { name="BeadArrayUseCases"; version="1.26.0"; sha256="1lncaw5hh42rx3f145f5d7a9sngnr8ssrip9jbi3c6qgd3g5xiir"; depends=[beadarray GEOquery limma]; };
BloodCancerMultiOmics2017 = derive2 { name="BloodCancerMultiOmics2017"; version="1.8.0"; sha256="0vlgihw522dlkky0jpb01agxyqq394w2gahacihzlc22dc83iz6d"; depends=[beeswarm Biobase DESeq2 devtools dplyr ggdendro ggplot2 glmnet gtable ipflasso RColorBrewer reshape2 scales SummarizedExperiment survival tibble]; };
CCl4 = derive2 { name="CCl4"; version="1.26.0"; sha256="1p0jly4v6mck2gnfy09alk57fvrvls5184p7vknn70fcjq02ivbf"; depends=[Biobase limma]; };
CLL = derive2 { name="CLL"; version="1.28.0"; sha256="0cbrm1hr9rvv2qjdxzjy99d5jbspwiyva9zmfy8nqb1kz17nkrh1"; depends=[affy Biobase]; };
CLLmethylation = derive2 { name="CLLmethylation"; version="1.8.0"; sha256="0r5q9j8cb7s29dpf3nd5hg7wl07rnfzk1mxmrh2hkkslzawrwrpy"; depends=[ExperimentHub SummarizedExperiment]; };
COHCAPanno = derive2 { name="COHCAPanno"; version="1.24.0"; sha256="1ay0xh3i13aqp0lisczm8jhvk13ld34jx2vc8jvjdzsxpfv5x7v0"; depends=[]; };
CONFESSdata = derive2 { name="CONFESSdata"; version="1.16.0"; sha256="0fqmxz5jbv6jygbmq95bdyfxcyri6djsscdaxbxkfv2vq3wml1ig"; depends=[]; };
COPDSexualDimorphism_data = derive2 { name="COPDSexualDimorphism.data"; version="1.24.0"; sha256="0pxkmq2xrq4ka7i5rnfvklilddj65m87f04ivh9xv0j19w51rxfn"; depends=[]; };
COSMIC_67 = derive2 { name="COSMIC.67"; version="1.24.0"; sha256="1a9ciia5g6w34k5mlnssn8r97v1v2bv9qmar4aklif5rnhkwr7mx"; depends=[GenomicRanges SummarizedExperiment VariantAnnotation]; };
CRCL18 = derive2 { name="CRCL18"; version="1.8.0"; sha256="1mcmbpi9wl5cln1wj30m5gkvfdj74kij32vfvvjvl38kw1jc4zyk"; depends=[Biobase]; };
CardinalWorkflows = derive2 { name="CardinalWorkflows"; version="1.20.0"; sha256="13465kiz3v8vyb80374lj0awfb5kw1z0rixin46nbi9j1jfsysmi"; depends=[Cardinal]; };
CellMapperData = derive2 { name="CellMapperData"; version="1.14.0"; sha256="1wc3ck21xdqcrv85jhfh07yvlhkw22xc567lj7yv8vzy0j68gvyv"; depends=[CellMapper ExperimentHub]; };
ChAMPdata = derive2 { name="ChAMPdata"; version="2.20.0"; sha256="135z6wkrmsg9bwj27by6x5850bpnwzncxvia1x8ggwqxnis0fl9c"; depends=[BiocGenerics GenomicRanges]; };
ChIC_data = derive2 { name="ChIC.data"; version="1.8.0"; sha256="0lx1yfimxg032hapdx6i6n11fjv1dmcd5a9d7id1h9cgm2qydq1w"; depends=[caret]; };
ChIPXpressData = derive2 { name="ChIPXpressData"; version="1.26.0"; sha256="0dzxdha2fay07rc7m5wj8aiggmn7qfifjy11ydqql4sfxw7l4wp1"; depends=[bigmemory]; };
ChIPexoQualExample = derive2 { name="ChIPexoQualExample"; version="1.12.0"; sha256="1yzy0y40ahw5p8ia0r3r5ns4an2n9m91zb9ypc25cjasgwpqca77"; depends=[]; };
ChimpHumanBrainData = derive2 { name="ChimpHumanBrainData"; version="1.26.0"; sha256="1bd119mh0r6m07ni2fb14dyambdzx5yfpy33n9r6f1mkcb39j4gp"; depends=[affy hexbin limma qvalue statmod]; };
CluMSIDdata = derive2 { name="CluMSIDdata"; version="1.4.0"; sha256="0j8xb2izl0gxwib0srk5bj4gdavi0czp4hwg2w61z7xgdpgqra33"; depends=[]; };
ConnectivityMap = derive2 { name="ConnectivityMap"; version="1.24.0"; sha256="0agb5xm7fm8cs9lj5yn9zr006zdhyzhz5q4gc920ksaqn9c238nf"; depends=[]; };
CopyNeutralIMA = derive2 { name="CopyNeutralIMA"; version="1.6.0"; sha256="0adly63fqnq600if81x0wivv792n6s33a65gjfkfjwvhi9n5lwbr"; depends=[ExperimentHub Rdpack]; };
CopyhelpeR = derive2 { name="CopyhelpeR"; version="1.20.0"; sha256="07i403mxx1zr7j7bkgmigl0s7ijr6wfnci1x56z9qy0jrrd21zpc"; depends=[]; };
DAPARdata = derive2 { name="DAPARdata"; version="1.18.0"; sha256="1vnb08lzzm5x23j8slw939al6shb83zv85y6wzyfil2szic51xr0"; depends=[knitr MSnbase]; };
DLBCL = derive2 { name="DLBCL"; version="1.28.0"; sha256="0d2jv5yni681a3rb39qgc1n8klr0lbwilkrkvd9wv0qq7glv9ba1"; depends=[Biobase]; };
DMRcatedata = derive2 { name="DMRcatedata"; version="2.6.0"; sha256="17k4cgpqkl47i2cp0c4nh22sz1w54pal16dkvzvrm0vzcvzxiwrv"; depends=[ExperimentHub GenomicFeatures Gviz IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylationEPICanno_ilm10b4_hg19 plyr readxl rtracklayer]; };
DREAM4 = derive2 { name="DREAM4"; version="1.24.0"; sha256="1dxsyzv5y4ivsg078j2m3zvv4h7c8rhk59gf3ndr8lcwp6a7xsim"; depends=[SummarizedExperiment]; };
DeSousa2013 = derive2 { name="DeSousa2013"; version="1.24.0"; sha256="1svjk5kcjhy23b1i5345y6j3mzdv8lxl4bzm60dcghz4inzbay5y"; depends=[affy AnnotationDbi Biobase cluster ConsensusClusterPlus frma frmaTools gplots hgu133plus2_db hgu133plus2frmavecs pamr rgl ROCR siggenes survival sva]; };
DmelSGI = derive2 { name="DmelSGI"; version="1.20.0"; sha256="0r1006as1vnwpzf42ps5ca2xbppfb8dcckkiwcajj1lv3g7265kn"; depends=[abind gplots igraph knitr limma rhdf5 TSP]; };
DonaPLLP2013 = derive2 { name="DonaPLLP2013"; version="1.26.0"; sha256="008msb4785ghcg0gqyxf999l58j89cvxbkci4n1z6lnjf2gdvl6v"; depends=[EBImage]; };
DrugVsDiseasedata = derive2 { name="DrugVsDiseasedata"; version="1.24.0"; sha256="05qc92cwkfwc7s68f81nd05xyl890m0w0w31n7pz8r3vxf9x09cy"; depends=[]; };
DuoClustering2018 = derive2 { name="DuoClustering2018"; version="1.6.0"; sha256="1gw99mgjmjv1fq7qg0g60r3x4zk0gp4d2zlm9p81avrz8gifyglr"; depends=[dplyr ExperimentHub ggplot2 ggthemes magrittr mclust purrr reshape2 tidyr viridis]; };
DvDdata = derive2 { name="DvDdata"; version="1.24.0"; sha256="1z5ijx56iygk0qbi2sb4r4rk42m3pblnig0mc8fh51mrqf6c4f6y"; depends=[]; };
EGSEAdata = derive2 { name="EGSEAdata"; version="1.16.0"; sha256="1drkhw0a463b1bdpn0r3yg57i1ll076c334ikjvc2bd191d3ilnd"; depends=[]; };
ELMER_data = derive2 { name="ELMER.data"; version="2.12.0"; sha256="098hdvcl340jhy1vf5rcv28bvi6bk6pfwblck7xsmhdshl9x41mg"; depends=[GenomicRanges]; };
EatonEtAlChIPseq = derive2 { name="EatonEtAlChIPseq"; version="0.26.0"; sha256="06bp5549iisaagl00xnjr6bhpgvkiybjgnwsf8i2fqs55dyvrbba"; depends=[GenomicRanges rtracklayer ShortRead]; };
FANTOM3and4CAGE = derive2 { name="FANTOM3and4CAGE"; version="1.24.0"; sha256="11arnks0p6c6rx929w3h878imxlslla8xnd44lqgzhal73n22ks2"; depends=[]; };
FIs = derive2 { name="FIs"; version="1.16.0"; sha256="0r6zrgrd8222rr4vk95gxanzjmdbj48rdc1wy3ld1h6rdjb8szyl"; depends=[]; };
Fletcher2013a = derive2 { name="Fletcher2013a"; version="1.24.0"; sha256="0hlqnsxcv6jbnswwyqfnxdgw7g2dygxcv81brlnrrw4whb3v12mj"; depends=[Biobase gplots limma VennDiagram]; };
Fletcher2013b = derive2 { name="Fletcher2013b"; version="1.24.0"; sha256="16mynpadclsciw7zayp3lgahzg1mhi186wjn160dzd2sasz5syw4"; depends=[Fletcher2013a igraph RColorBrewer RedeR RTN]; };
FlowSorted_Blood_450k = derive2 { name="FlowSorted.Blood.450k"; version="1.26.0"; sha256="0dlhr5dagddw399w64jx01pfbhzx6j2rldpqrpxa03n1fjr5qfaa"; depends=[minfi]; };
FlowSorted_Blood_EPIC = derive2 { name="FlowSorted.Blood.EPIC"; version="1.6.1"; sha256="1hkw1mg60wf64lrq3h26x2zp0mvhriai9d46mirmkfng4y8ka4xy"; depends=[ExperimentHub genefilter IlluminaHumanMethylationEPICanno_ilm10b4_hg19 minfi nlme quadprog S4Vectors SummarizedExperiment]; };
FlowSorted_CordBlood_450k = derive2 { name="FlowSorted.CordBlood.450k"; version="1.16.0"; sha256="1j1hl33vydrhgii0fam66nywycg80hi845hndhcv5i9l5siiiwbl"; depends=[minfi]; };
FlowSorted_CordBloodCombined_450k = derive2 { name="FlowSorted.CordBloodCombined.450k"; version="1.4.1"; sha256="0xyji58czc2y0snrydgn23q4z80zabda67jfaqjpwz0zpjh0hwzm"; depends=[ExperimentHub FlowSorted_Blood_EPIC IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylationEPICanno_ilm10b4_hg19 minfi SummarizedExperiment]; };
FlowSorted_CordBloodNorway_450k = derive2 { name="FlowSorted.CordBloodNorway.450k"; version="1.14.0"; sha256="1b2h5r4pv4z8v3cb2sw0wg45rb54gqswrmvk4jvwwzypfdd6cvfw"; depends=[minfi]; };
FlowSorted_DLPFC_450k = derive2 { name="FlowSorted.DLPFC.450k"; version="1.24.0"; sha256="09305nfvwn4n4xzvjwcyiwq49xhgajgmr7r86yypmx643r86rwai"; depends=[minfi]; };
FunciSNP_data = derive2 { name="FunciSNP.data"; version="1.21.0"; sha256="0kcgvfks2y9jiljl9a2s13ryljv92q2h656jfjkqmfw0zrlxx244"; depends=[IRanges rtracklayer]; };
GGdata = derive2 { name="GGdata"; version="1.26.0"; sha256="03klh3yczfba83yh7350jwn1dqq1bi8lgx9h1bqilhc36plz14k5"; depends=[AnnotationDbi Biobase GGBase illuminaHumanv1_db snpStats]; };
GIGSEAdata = derive2 { name="GIGSEAdata"; version="1.6.0"; sha256="02pjidn3sz6z6zy8p8wp5nmin5cmjglddq035bbxzxbx6npb7mxk"; depends=[]; };
GSBenchMark = derive2 { name="GSBenchMark"; version="1.8.0"; sha256="1cwgrfyjjz5l33qcya2vd9c2d89ma8053yz1yv5z1pvrfagdanli"; depends=[]; };
GSE62944 = derive2 { name="GSE62944"; version="1.16.0"; sha256="0s5nf9qi940qx8vsmybva0v4yphg4s0nm8if0p2ipw4ignkayf09"; depends=[Biobase GEOquery]; };
GSVAdata = derive2 { name="GSVAdata"; version="1.24.0"; sha256="17z2b7waggy4xv3bx92yhv53sgc4w7im5rq3mygdb91p1swqsgmc"; depends=[Biobase GSEABase hgu95a_db]; };
GWASdata = derive2 { name="GWASdata"; version="1.26.0"; sha256="0az9vxafbdjm01ysz4zid8iglgddl81kfxg70zgrx6sal47kc4lz"; depends=[GWASTools]; };
GeuvadisTranscriptExpr = derive2 { name="GeuvadisTranscriptExpr"; version="1.16.0"; sha256="0df0231l3cpdf2n2bcm6wjs7nmbl96h4rajicba03r1a92ii0v6b"; depends=[]; };
HCAData = derive2 { name="HCAData"; version="1.4.0"; sha256="16w6707dhw260m0f1n7nxf4k3g18qn3l7nmg9wqkdiwlczwhx8rz"; depends=[AnnotationHub ExperimentHub HDF5Array SingleCellExperiment]; };
HD2013SGI = derive2 { name="HD2013SGI"; version="1.28.0"; sha256="0ygz008dmhhd2sr2qpvqcha7jr5k3mr64w25pbjil2gx2lqz8lbw"; depends=[EBImage geneplotter gplots limma LSD RColorBrewer splots vcd]; };
HDCytoData = derive2 { name="HDCytoData"; version="1.8.0"; sha256="1kj4hkl814a69pz9m2ifim14nwr3w6sw6mhwiv7y4ifv4hbvyd01"; depends=[ExperimentHub flowCore SummarizedExperiment]; };
HEEBOdata = derive2 { name="HEEBOdata"; version="1.26.0"; sha256="0mh6v6g24jm966d0nsrwcv52km72qi8jal6ann6qfa0qwvcbhr6m"; depends=[]; };
HIVcDNAvantWout03 = derive2 { name="HIVcDNAvantWout03"; version="1.28.0"; sha256="0gxmg00xaafq3yz9zqqsyn19p3n8rlmy6q623xzssn7nvgggffsi"; depends=[]; };
HMP16SData = derive2 { name="HMP16SData"; version="1.8.2"; sha256="1hfh9k9782irs2d7yp427x9x85mn4d6axvil9n7pa8a0s8b1f013"; depends=[AnnotationHub assertthat dplyr ExperimentHub kableExtra knitr magrittr readr S4Vectors stringr SummarizedExperiment tibble]; };
HMP2Data = derive2 { name="HMP2Data"; version="1.1.0"; sha256="1vlq98g07vx4vx59mrclw3cimwvdxn60r510jfjnlb5nky1pasnj"; depends=[AnnotationHub assertthat data_table dplyr ExperimentHub kableExtra knitr magrittr MultiAssayExperiment phyloseq readr S4Vectors SummarizedExperiment]; };
HSMMSingleCell = derive2 { name="HSMMSingleCell"; version="1.8.0"; sha256="1d28ca12m0qc83f3jpd9n4h1d71vgfix7q770hg84aljx9xifmmc"; depends=[]; };
HarmanData = derive2 { name="HarmanData"; version="1.16.0"; sha256="0snci97jrgk98yyjjbfm9659fq2iiabfpdx08iriv0lgf1k674zz"; depends=[]; };
HarmonizedTCGAData = derive2 { name="HarmonizedTCGAData"; version="1.10.0"; sha256="09xacn52wxgm31l9vjbbba19f975b8dwxhxv2bfjy61q73qsfxnj"; depends=[ExperimentHub]; };
HelloRangesData = derive2 { name="HelloRangesData"; version="1.14.0"; sha256="1gx94wps1cb0ma0gsmnw9vcb03wv7f9m4kjmaiwj1p3awmvjlzlp"; depends=[]; };
HiCDataHumanIMR90 = derive2 { name="HiCDataHumanIMR90"; version="1.8.0"; sha256="02fsfq716vfxcwczzdrarwqmmy739mxsrdhr13zvprppa2jw9mji"; depends=[]; };
HiCDataLymphoblast = derive2 { name="HiCDataLymphoblast"; version="1.24.0"; sha256="1sr250gypp2wyi12jq0k72w3galbi3sq00pgsq34habngr1ladzp"; depends=[]; };
HighlyReplicatedRNASeq = derive2 { name="HighlyReplicatedRNASeq"; version="1.0.0"; sha256="04wr6phglmms6s8dnpr03kdq3dba8vipx5w3qp8fkiha3f9b3pdi"; depends=[ExperimentHub S4Vectors SummarizedExperiment]; };
Hiiragi2013 = derive2 { name="Hiiragi2013"; version="1.24.0"; sha256="14hqlkyz4xp1jmhgmfy76dw5f3la2xcsz6pzdr7jn525bwmh4np3"; depends=[affy Biobase boot clue cluster genefilter geneplotter gplots gtools KEGGREST lattice latticeExtra MASS mouse4302_db RColorBrewer xtable]; };
HumanAffyData = derive2 { name="HumanAffyData"; version="1.14.0"; sha256="0jgg1xlf699q89bx7scpibr905vi77yk59290b724y2qrimjg4na"; depends=[Biobase ExperimentHub]; };
IHWpaper = derive2 { name="IHWpaper"; version="1.16.1"; sha256="0jfvx364zf5kbl5l8iff48ng9732d8c598n0b2yzz9glkja5w3wb"; depends=[Biobase BiocGenerics BiocParallel cowplot DESeq2 dplyr fdrtool genefilter ggplot2 IHW qvalue Rcpp SummarizedExperiment]; };
ITALICSData = derive2 { name="ITALICSData"; version="2.26.0"; sha256="0s4b2j78ni8nwnzh7xlj1aacq522awvlp20isrx25nhnmnq3nbjn"; depends=[]; };
Illumina450ProbeVariants_db = derive2 { name="Illumina450ProbeVariants.db"; version="1.24.0"; sha256="1gmk5mknbqp3h21cqqqrhglpnm5f04ifliv46bns1k2rndx1d68c"; depends=[]; };
IlluminaDataTestFiles = derive2 { name="IlluminaDataTestFiles"; version="1.26.0"; sha256="0v6y52azp4a2x356kq2hqisnn581jhvyi02av4zjnxvr3h6qbh7j"; depends=[]; };
Iyer517 = derive2 { name="Iyer517"; version="1.30.0"; sha256="0nrjbr9qnqnsmbn3i0kn9zg0m216f7xjm4jwpnlpcwacsz3x355r"; depends=[Biobase]; };
JASPAR2014 = derive2 { name="JASPAR2014"; version="1.24.0"; sha256="1scrv91vy9i1fh2r15qkr1f0j78v211y366271ivwbf1r361npdn"; depends=[Biostrings]; };
JASPAR2016 = derive2 { name="JASPAR2016"; version="1.16.0"; sha256="18sna9lly7yvgn317lpvgv2b4xm1cdv7lwcrvr3cf47mbwh7sj08"; depends=[]; };
JctSeqData = derive2 { name="JctSeqData"; version="1.18.0"; sha256="096g9z3kmivn1vhgrz7blba0w5fchcivxd6zr132q24f9qciggyk"; depends=[]; };
KEGGandMetacoreDzPathwaysGEO = derive2 { name="KEGGandMetacoreDzPathwaysGEO"; version="1.8.0"; sha256="05a6lf3vxlzy91d90mmbnzl2kk30g2z3ql96n404hiplq0gp888j"; depends=[Biobase BiocGenerics]; };
KEGGdzPathwaysGEO = derive2 { name="KEGGdzPathwaysGEO"; version="1.26.0"; sha256="1brsghk3883f257v41kxqx7xmf6rmcvmhzlwx8527i7nnyk5yfp9"; depends=[Biobase BiocGenerics]; };
KOdata = derive2 { name="KOdata"; version="1.14.0"; sha256="0wyaccdm6sj8qlzqdg44q45icnflnwrkajjav2pbpfi6wf055xna"; depends=[]; };
LiebermanAidenHiC2009 = derive2 { name="LiebermanAidenHiC2009"; version="0.26.0"; sha256="0c4bv2dq153mg2a5rjshcmsbjl0jjx8ic6b8w6bjymqj823r73d7"; depends=[IRanges KernSmooth]; };
ListerEtAlBSseq = derive2 { name="ListerEtAlBSseq"; version="1.20.0"; sha256="1vklgv9ajsdmzmrqz1iah3bf19x91y8nzxxbfh4lbiw8si2c2rfr"; depends=[methylPipe]; };
LungCancerACvsSCCGEO = derive2 { name="LungCancerACvsSCCGEO"; version="1.24.0"; sha256="0w27kpa8a96sb94wvp801yll2g0cwyvkpfizfgxfrcd9grznwcmm"; depends=[]; };
LungCancerLines = derive2 { name="LungCancerLines"; version="0.26.0"; sha256="0baapfr8w4718qh4kfx8x8jfi4qaif4blzl27g76zyqcm801y13m"; depends=[Rsamtools]; };
M3DExampleData = derive2 { name="M3DExampleData"; version="1.14.0"; sha256="1l42jqdi25g3w08aiivs3swbk48sipfhc9ddpal4fimylr453w9h"; depends=[]; };
MAQCsubset = derive2 { name="MAQCsubset"; version="1.26.0"; sha256="1lwzcy6ln722ixrcrrvhardkxpqsjyrlyfqpsj5za3m23mxln9hl"; depends=[affy Biobase lumi]; };
MAQCsubsetAFX = derive2 { name="MAQCsubsetAFX"; version="1.26.0"; sha256="1g2abaij70wqsxs49cirayx2w9za4x6bq0c6c1q7y14ii9a8sj0p"; depends=[affy Biobase]; };
MAQCsubsetILM = derive2 { name="MAQCsubsetILM"; version="1.26.0"; sha256="0dm00hr7p3dgyhcj6s4cgcx8pjv366fix5pr0arfm0zgl4gby1p4"; depends=[Biobase lumi]; };
MEDIPSData = derive2 { name="MEDIPSData"; version="1.24.0"; sha256="17cv7nis0dlj4qvvp114akywq79my0z5dhn13mm2yz8x492s7dy4"; depends=[]; };
MEEBOdata = derive2 { name="MEEBOdata"; version="1.26.0"; sha256="0rcw9ashljvdf1jsn6kyc36vrz3a8fsphmvabxc4b0plzx05brsv"; depends=[]; };
MIGSAdata = derive2 { name="MIGSAdata"; version="1.12.0"; sha256="1mib6nibcxkjsf9hvf3q2sw6kbzyikfh6a663wf6awl0s876jlq1"; depends=[]; };
MMAPPR2data = derive2 { name="MMAPPR2data"; version="1.2.0"; sha256="0fczp8mbn4g7s1kfnw5bq7h4rydpwqg9nsad0vyafcn4vcpy05zg"; depends=[Rsamtools]; };
MMDiffBamSubset = derive2 { name="MMDiffBamSubset"; version="1.24.0"; sha256="118wxhj8gdprwkk8mr72d9sz3gx6lcz50s41yq6hkjcghpvpkba0"; depends=[]; };
MOFAdata = derive2 { name="MOFAdata"; version="1.4.0"; sha256="0z52zmhwvdvdk2ngq31c8v98lmy531ygvl29nsaj9sxhjkj7m7cl"; depends=[]; };
MSMB = derive2 { name="MSMB"; version="1.6.0"; sha256="0wbn9mn0aiqfm5g4qrbypz8yprz3wn6162nv398zpgz3c671380y"; depends=[]; };
MSstatsBioData = derive2 { name="MSstatsBioData"; version="1.10.0"; sha256="1np673w9ga64djlxkbazkdbl9ng8fm5s3s660i61iblgkv808n3c"; depends=[]; };
MTseekerData = derive2 { name="MTseekerData"; version="1.6.0"; sha256="0hi3347c9sk89zmr6s07ny4s03q9v2iy0ycz7cl3jf9dwdm4kiy1"; depends=[GenomeInfoDb GenomicFeatures GenomicRanges Homo_sapiens IRanges VariantAnnotation]; };
MUGAExampleData = derive2 { name="MUGAExampleData"; version="1.8.0"; sha256="1yhnkbdac4nb70w1lv7j2hhzcpsd7c6860pcjf0mkahvh1w6fb3s"; depends=[]; };
MetaGxBreast = derive2 { name="MetaGxBreast"; version="1.8.0"; sha256="0pksmm6wh8p6jqvv7r4yfwdbgpzjfjjcck61907dckbkq1s5jpsk"; depends=[AnnotationHub Biobase ExperimentHub impute lattice SummarizedExperiment]; };
MetaGxOvarian = derive2 { name="MetaGxOvarian"; version="1.8.0"; sha256="0xx86g0x20r4x5p9ab9p2qyzsnjflg3cslfhgywcagr9k5ydbgbs"; depends=[AnnotationHub Biobase ExperimentHub impute lattice SummarizedExperiment]; };
MetaGxPancreas = derive2 { name="MetaGxPancreas"; version="1.8.0"; sha256="08skv2gyiwrbqyigfcbdnajb5945lv0f6q9sydkkiwm2kgikipqx"; depends=[AnnotationHub Biobase ExperimentHub impute lattice SummarizedExperiment]; };
MethylAidData = derive2 { name="MethylAidData"; version="1.20.0"; sha256="1mvw87x8qd63jkh32kb1vnpwh7lyvs4pdiiyvalsvlm6xrz4izgh"; depends=[MethylAid]; };
MouseGastrulationData = derive2 { name="MouseGastrulationData"; version="1.2.0"; sha256="1658qxjr2i5i1iwvcn74xasiysa0mq0d3y7j0536dq5dqb639262"; depends=[BiocGenerics ExperimentHub S4Vectors SingleCellExperiment SummarizedExperiment]; };
NCIgraphData = derive2 { name="NCIgraphData"; version="1.24.0"; sha256="00v5sip4q08hvwsl32yflsvqwkm5cldcp2ys639rgjcyy2ygyyl1"; depends=[]; };
NGScopyData = derive2 { name="NGScopyData"; version="1.8.0"; sha256="0lm0kkk0pqxqbwyiv61irljbhkqcamyl96fzp5xx8kzvzqjvgnkq"; depends=[]; };
NestLink = derive2 { name="NestLink"; version="1.4.0"; sha256="1scfix1qlih2fvp1ib6j833m833328phr49q750v9w06sxgq8qii"; depends=[AnnotationHub Biostrings ExperimentHub gplots protViz ShortRead]; };
Neve2006 = derive2 { name="Neve2006"; version="0.26.0"; sha256="1xq35758qpwyy6wcniw2pdiv4bl3i9kawgzg2zlspkf14m4kxsyq"; depends=[annotate Biobase hgu133a_db]; };
OMICsPCAdata = derive2 { name="OMICsPCAdata"; version="1.6.0"; sha256="1jjxk97g58m1jly0sn99js6zgaamj1zidp3p6pjcipdr30gfgmin"; depends=[MultiAssayExperiment]; };
OnassisJavaLibs = derive2 { name="OnassisJavaLibs"; version="1.10.0"; sha256="1xpj66ab743nw486ixp6ijv59xy2g5jb07aafynpbn87mjq4f4yj"; depends=[rJava]; };
PCHiCdata = derive2 { name="PCHiCdata"; version="1.16.0"; sha256="0cvg4mmpnkbicm2n678b31ji8gg828af2s2i3191dz2h1smg0938"; depends=[Chicago]; };
PREDAsampledata = derive2 { name="PREDAsampledata"; version="0.28.0"; sha256="1f4xnk11i5pgckglkrc4fp80x07aw318a0kr2lgdm9xm54ilvdn5"; depends=[affy annotate Biobase PREDA]; };
PWMEnrich_Dmelanogaster_background = derive2 { name="PWMEnrich.Dmelanogaster.background"; version="4.22.0"; sha256="0djlc83x67822fph717xx8lcx6qblpqvvb7ja5910fl3flqbf0w6"; depends=[PWMEnrich]; };
PWMEnrich_Hsapiens_background = derive2 { name="PWMEnrich.Hsapiens.background"; version="4.22.0"; sha256="1hgy7zjd057gxdxibi111nyzpsawkxs5a9jsrpxdrz378l0vg2b5"; depends=[PWMEnrich]; };
PWMEnrich_Mmusculus_background = derive2 { name="PWMEnrich.Mmusculus.background"; version="4.22.0"; sha256="1hp0n6790i6rhwx4x2kvf9bs0lwyx6jd394jf6rly889yysl7zyl"; depends=[PWMEnrich]; };
PasillaTranscriptExpr = derive2 { name="PasillaTranscriptExpr"; version="1.16.0"; sha256="1ml9fcpcah0w9rk0mmymjcsp16vnz60dry2r4bjxfi73m0qbr5l9"; depends=[]; };
PathNetData = derive2 { name="PathNetData"; version="1.24.0"; sha256="1hb1gq35h4rnhzm00dk77la3y7imqhp9qg15akag5cx30pn4dqmz"; depends=[]; };
PepsNMRData = derive2 { name="PepsNMRData"; version="1.6.0"; sha256="1j2z4ks355c2vnm6m0bk1b3yq73mi1pp9z7j39jll4arv7kmrm3g"; depends=[]; };
PhyloProfileData = derive2 { name="PhyloProfileData"; version="1.2.0"; sha256="1cn3y9mcrrh0yq2bsks16w3c041f5pir40zar86f25br7bw7kbas"; depends=[Biostrings ExperimentHub]; };
ProData = derive2 { name="ProData"; version="1.26.0"; sha256="0vs4ybckr0bk7hcl1y2afp1rd1h0nya281pjs65dc4pcw6qhv32w"; depends=[Biobase]; };
PtH2O2lipids = derive2 { name="PtH2O2lipids"; version="1.14.0"; sha256="04h5gidmi0vwhs8vlg7kvijz938dk8ljf33r4xr84axvjlh3wh7w"; depends=[CAMERA LOBSTAHS xcms]; };
QDNAseq_hg19 = derive2 { name="QDNAseq.hg19"; version="1.18.0"; sha256="05p10rm93625lh0gv6wvfdvvqz526q35p4mgih6d1mgm90kx099v"; depends=[QDNAseq]; };
QDNAseq_mm10 = derive2 { name="QDNAseq.mm10"; version="1.18.0"; sha256="0jpdvd9s2g2fi4wdmbriz18spngbhny66v2b417mcjjlm4vqssv9"; depends=[QDNAseq]; };
QUBICdata = derive2 { name="QUBICdata"; version="1.16.0"; sha256="1ya6r7fggwpfk8g7cv1f6x4aaarl5m625ch1rx6hw2mrjwazjgkb"; depends=[]; };
RGMQLlib = derive2 { name="RGMQLlib"; version="1.8.0"; sha256="099gi4aykzkl4p0gs7w655rhrvyb295x2038szwbl7k0801ffjnd"; depends=[]; };
RIPSeekerData = derive2 { name="RIPSeekerData"; version="1.24.0"; sha256="019jfgv6pk93cwkgq4wpq850ff7269s793vdg91amwpbq4z4ff2i"; depends=[]; };
RITANdata = derive2 { name="RITANdata"; version="1.12.0"; sha256="16ysc6aaqb6y7prckbbbshl5g41hill43gp273j9mhgn9yqrd66s"; depends=[]; };
RMassBankData = derive2 { name="RMassBankData"; version="1.26.0"; sha256="1v9by52hzncm54zw7rwjpw91anmbwaihkmh0qih44jh1l0zv3il8"; depends=[]; };
RNASeqRData = derive2 { name="RNASeqRData"; version="1.6.0"; sha256="14g6ylmi3r4iv30sxdv4kl8c2fvkwng4z5b60dsiwm276ywd3ggs"; depends=[]; };
RNAinteractMAPK = derive2 { name="RNAinteractMAPK"; version="1.25.0"; sha256="0a8yki07p27bv6zhsys2l8yyx21742kb9pnvz0rhf3ynh3bdapd6"; depends=[fields gdata genefilter MASS RNAinteract sparseLDA]; };
RNAmodR_Data = derive2 { name="RNAmodR.Data"; version="1.2.0"; sha256="1kzqw9jfjccviz7gaw19rkha3a8k1x9wmmdf8wlnbpfwv6f58m74"; depends=[ExperimentHub ExperimentHubData]; };
RNAseqData_HNRNPC_bam_chr14 = derive2 { name="RNAseqData.HNRNPC.bam.chr14"; version="0.26.0"; sha256="0hc6kj732wvbg245zip12g7h04pj30wi8abkg00fdnqgrmd7l6d0"; depends=[]; };
RRBSdata = derive2 { name="RRBSdata"; version="1.8.0"; sha256="1aa374gmq6hv59qxsnsgigivaa56062g7byykag0vnwy907s3jpm"; depends=[BiSeq]; };
RTCGA_CNV = derive2 { name="RTCGA.CNV"; version="1.16.0"; sha256="0yzq8h34c5v1hrwm944nz2iafzra2gqw94d3adz4q1vaggrv4n8d"; depends=[RTCGA]; };
RTCGA_PANCAN12 = derive2 { name="RTCGA.PANCAN12"; version="1.16.0"; sha256="05fz5zy0y7g0ixv400z1cxrlwhqw6dhnyx5j5mnxw7d2w3zwwndg"; depends=[RTCGA]; };
RTCGA_RPPA = derive2 { name="RTCGA.RPPA"; version="1.16.0"; sha256="18vgrvfbcsa20jyaxyi645ipg1ybfvgdnjq3d6dfg0n06fvxslnd"; depends=[RTCGA]; };
RTCGA_clinical = derive2 { name="RTCGA.clinical"; version="20151101.18.0"; sha256="1p5a2667hrp0c5ip9lkil9g1ql5538g513n7x6ns9yjgxrlplmww"; depends=[RTCGA]; };
RTCGA_mRNA = derive2 { name="RTCGA.mRNA"; version="1.16.0"; sha256="0s0l7z2bvjhifqzllc6r57pki9pfn6kmzsk219xmjalc91i4p7id"; depends=[RTCGA]; };
RTCGA_methylation = derive2 { name="RTCGA.methylation"; version="1.16.0"; sha256="1z1vxcahxzxygy5l86bcx48a3bfk22c6w8dlp12sdwkj9qx4rsd9"; depends=[RTCGA]; };
RTCGA_miRNASeq = derive2 { name="RTCGA.miRNASeq"; version="1.16.0"; sha256="15bmd2208nj4hbqivqq7fi3fggbip0y15q5nf9dncvglrfk80yjs"; depends=[RTCGA]; };
RTCGA_mutations = derive2 { name="RTCGA.mutations"; version="20151101.18.0"; sha256="0klm1gxl45f8ipwisv0y72cicv55mffwd90y3m8vlacxhan4v6my"; depends=[RTCGA]; };
RTCGA_rnaseq = derive2 { name="RTCGA.rnaseq"; version="20151101.18.0"; sha256="0iyn91f2dblnyd3xpp6xlq2cnkd2imw87h985qxs5v8nb2xar0wq"; depends=[RTCGA]; };
RUVnormalizeData = derive2 { name="RUVnormalizeData"; version="1.8.0"; sha256="12rffpfgradgv9dgiv7gi7rbiyx8fy01fv993qqv7dnz2wpzy8zc"; depends=[Biobase]; };
RcisTarget_hg19_motifDBs_cisbpOnly_500bp = derive2 { name="RcisTarget.hg19.motifDBs.cisbpOnly.500bp"; version="1.8.0"; sha256="0flqmdg4wxyr5mv71rhks4jcbya8d0v8qz6iqa6c2qabmrl4sflx"; depends=[data_table]; };
ReactomeGSA_data = derive2 { name="ReactomeGSA.data"; version="1.2.0"; sha256="08v9prz162rf5i01lwv60k6k8skx2qxmpw4z8g6w5n67d5ap1wls"; depends=[edgeR limma ReactomeGSA Seurat]; };
RegParallel = derive2 { name="RegParallel"; version="1.6.0"; sha256="1b3x8547cwv38wzfqrvkh9jrmzamn7wfm1sk2nk3i0xrhqh6jqaf"; depends=[arm data_table doParallel foreach iterators stringr survival]; };
RforProteomics = derive2 { name="RforProteomics"; version="1.26.0"; sha256="1javba8cqjnczprvd2lk36xy9yr2cxyj69gapqi4x1h0z274hjz9"; depends=[BiocManager biocViews MSnbase R_utils shiny]; };
RnBeads_hg19 = derive2 { name="RnBeads.hg19"; version="1.20.0"; sha256="12g0fnmcv5lk0v96zrfzk594krrsrma8svwqv28lg6b1fvkaggcg"; depends=[GenomicRanges]; };
RnBeads_hg38 = derive2 { name="RnBeads.hg38"; version="1.20.0"; sha256="18p8lfn2m5m5f79nyfzvp47ipgdfxqzsf1hlsgn4jsl7k1dn4gby"; depends=[GenomicRanges]; };
RnBeads_mm10 = derive2 { name="RnBeads.mm10"; version="1.20.0"; sha256="1wn05pycjx3waa4327g4krr3ih91rfh6v8r70wj7d536lc4zgvvs"; depends=[GenomicRanges]; };
RnBeads_mm9 = derive2 { name="RnBeads.mm9"; version="1.20.0"; sha256="1006k83ck6mvh1awczzd3bpkprl9611faicxxaxy7mghg15xn9s2"; depends=[GenomicRanges]; };
RnBeads_rn5 = derive2 { name="RnBeads.rn5"; version="1.20.0"; sha256="1l4jgs7rvjbdyrnh8ax8yaqbz6nd3mxq6sagc0jx6g64imc0rr49"; depends=[GenomicRanges]; };
RnaSeqSampleSizeData = derive2 { name="RnaSeqSampleSizeData"; version="1.20.0"; sha256="0ylrg1zlzp7k54n2yhnxm222h671ci9p9bfllkp66rjyjrrb4kpk"; depends=[edgeR]; };
SBGNview_data = derive2 { name="SBGNview.data"; version="1.2.0"; sha256="114fq1pqlc29ydl0gvwcbnls7lb4bzx5gc0bz8plm2r5a46dqr1k"; depends=[knitr rmarkdown]; };
SCLCBam = derive2 { name="SCLCBam"; version="1.20.0"; sha256="17xmaazysshijcdpchk6aab99kdiinyw2mb7r7v3w1043yl3a6dj"; depends=[]; };
SNAData = derive2 { name="SNAData"; version="1.34.0"; sha256="0fi6zdhfhdxgimm3pdn6d1q1bjk13nw1nnc7gmvlk1a4nd3j8g86"; depends=[graph]; };
SNAGEEdata = derive2 { name="SNAGEEdata"; version="1.24.0"; sha256="09z76j2cdqnxn6bs0sazhayfk9a7qr2j5x678hnqqpwr255jr8w3"; depends=[]; };
SNPhoodData = derive2 { name="SNPhoodData"; version="1.18.0"; sha256="1abiqn5p1cr4wrzakpvqirhj40g9airav1vi0n568832mqclsdwk"; depends=[]; };
SVM2CRMdata = derive2 { name="SVM2CRMdata"; version="1.20.0"; sha256="172hgkh6s4lj9hdh5wr6k12w2nr60g2q5ra0r5d06vs96ha8cwzl"; depends=[]; };
Single_mTEC_Transcriptomes = derive2 { name="Single.mTEC.Transcriptomes"; version="1.16.0"; sha256="1liw2d0x1yf7jdizarb98f5jaw0a721qqhxgbva7923rmn9bh05q"; depends=[]; };
SingleCellMultiModal = derive2 { name="SingleCellMultiModal"; version="1.0.0"; sha256="17hxan83zzya08csandpa0xrhla0wkhii8mc19yrlzqbnl5r5v1g"; depends=[AnnotationHub BiocFileCache ExperimentHub MultiAssayExperiment rappdirs]; };
SomatiCAData = derive2 { name="SomatiCAData"; version="1.26.0"; sha256="1sz2qdn23dnr5hbif6yv0r19b7db9v5vs9sqrjj0nid93lqxmzqy"; depends=[]; };
SomaticCancerAlterations = derive2 { name="SomaticCancerAlterations"; version="1.24.0"; sha256="1innxq39svlrw8v3qnnr3crf49jmj7pvymbh3bp14hhx12ylrvk5"; depends=[exomeCopy GenomicRanges IRanges S4Vectors stringr]; };
SpikeIn = derive2 { name="SpikeIn"; version="1.30.0"; sha256="0xnb93q0wrd41x2lgmcraphz27v5ric9qn1cs2459f83hsl3ngj2"; depends=[affy]; };
SpikeInSubset = derive2 { name="SpikeInSubset"; version="1.28.0"; sha256="0a42i0kixgxixr1fbm0vnzl08yhaxl2zrxkq9pvwsid6sjxnzbbg"; depends=[affy Biobase]; };
TBX20BamSubset = derive2 { name="TBX20BamSubset"; version="1.24.0"; sha256="0h5rpwzqwa982m32kasyaj676hpd4pv0n4wba328m9shwcx0zlqi"; depends=[Rsamtools xtable]; };
TCGAMethylation450k = derive2 { name="TCGAMethylation450k"; version="1.24.0"; sha256="18z3pn5x00kdhg085ai7r592n6gpbaib6g1i3q1859v82hnn8k3l"; depends=[]; };
TCGAWorkflowData = derive2 { name="TCGAWorkflowData"; version="1.12.0"; sha256="1185s7dmdn3xhdip1q2vilqhvckqszywsrfk47yrqaacc0mbnbgk"; depends=[SummarizedExperiment]; };
TCGAbiolinksGUI_data = derive2 { name="TCGAbiolinksGUI.data"; version="1.8.0"; sha256="060kxhrw00c3mj2fdp49zws7dz9wqc2p96zv1ikvnccqfd7f2ps8"; depends=[]; };
TCGAcrcmRNA = derive2 { name="TCGAcrcmRNA"; version="1.8.0"; sha256="0jyhk5arr73pvcvqfra9rvm7pwhbgr67ls9nszkm8jxhb8jvzv5l"; depends=[Biobase]; };
TCGAcrcmiRNA = derive2 { name="TCGAcrcmiRNA"; version="1.8.0"; sha256="1a7kawwihqvh06p3l9yfv9d05rv1nwh8vfpmm6553ddmxpkfmfa3"; depends=[Biobase]; };
TENxBUSData = derive2 { name="TENxBUSData"; version="1.2.1"; sha256="0cg1xii1zfilw64nkvfs0gsgys3aabnvkhhbkfdvqahp2ayhi7lb"; depends=[AnnotationHub BiocGenerics ExperimentHub]; };
TENxBrainData = derive2 { name="TENxBrainData"; version="1.8.0"; sha256="1mx07z95s29d02j0imqmvhf9v15j8qplggp233k3c6dgxlxbd8rg"; depends=[AnnotationHub ExperimentHub HDF5Array SingleCellExperiment]; };
TENxPBMCData = derive2 { name="TENxPBMCData"; version="1.6.0"; sha256="1ivps0sbw59ha8vha1wnnz92srnvp1pvybysi4fjb7w08xs0iyif"; depends=[AnnotationHub ExperimentHub HDF5Array SingleCellExperiment]; };
TabulaMurisData = derive2 { name="TabulaMurisData"; version="1.6.0"; sha256="1nnwm0irg6qy8jkldw42w3yvk9jmpy0gm4ymiw127wv6kfvqcb67"; depends=[ExperimentHub]; };
TargetScoreData = derive2 { name="TargetScoreData"; version="1.24.0"; sha256="1p554n42c8vsva09mwcvvvgr0xbmyyayv3shq3dr9lbh6q3k9vwi"; depends=[]; };
TargetSearchData = derive2 { name="TargetSearchData"; version="1.26.0"; sha256="16dai2fg0m6mya001i7m2z8bg6sf3ny3lqwpdlkm3panxh3w29v0"; depends=[]; };
TimerQuant = derive2 { name="TimerQuant"; version="1.18.0"; sha256="06qr5byggasym0k9hv5f992swf59951hg2z9p9d1gkvjgp5i8hl0"; depends=[deSolve dplyr ggplot2 gridExtra locfit shiny]; };
VariantToolsData = derive2 { name="VariantToolsData"; version="1.12.0"; sha256="0jj2gwyxj8rsw2wcz0s7zniry9kylch4mzi1y31mhh18f3wwc36i"; depends=[BiocGenerics GenomicRanges VariantAnnotation]; };
WES_1KG_WUGSC = derive2 { name="WES.1KG.WUGSC"; version="1.20.0"; sha256="0g6ykbx3kyf4misa2k7wsikdfjxk8lachfkhc22iz7xlglnlmw0p"; depends=[]; };
WGSmapp = derive2 { name="WGSmapp"; version="1.0.0"; sha256="0y3ar2mrsqbryd5m3nampfc6jz11ilnfgfkydz1nwr01kblngzak"; depends=[GenomicRanges]; };
XhybCasneuf = derive2 { name="XhybCasneuf"; version="1.26.0"; sha256="106wdzm446yzcnxgkfpm1mfcmn1glbwal9ha2bdn9blmhks2bj2x"; depends=[affy ath1121501cdf RColorBrewer tinesath1cdf]; };
adductData = derive2 { name="adductData"; version="1.4.0"; sha256="1s807spkvzmhqcjcdv2njydip3z3d0zk1h3cp860qyqni90q754w"; depends=[AnnotationHub ExperimentHub]; };
affycompData = derive2 { name="affycompData"; version="1.26.0"; sha256="0sjhvh1sf2l6ik1qa679mkj2flw5gn1ysnmbph9806368s42yb2s"; depends=[affycomp Biobase]; };
affydata = derive2 { name="affydata"; version="1.36.0"; sha256="1dnf6a04q05sxm2ki53nhk2jg4w7k8i40faligckai0nr2xikp8l"; depends=[affy]; };
airway = derive2 { name="airway"; version="1.8.0"; sha256="1h93izcpw2lqljaw158bw8n1mqkxrblrsz5nwiix4ssksx062daa"; depends=[SummarizedExperiment]; };
alpineData = derive2 { name="alpineData"; version="1.14.0"; sha256="1rzafq05m4fymwdzl5i5i0svpq4f36gg1wpcdcslrpxc7pc47izx"; depends=[AnnotationHub ExperimentHub GenomicAlignments]; };
antiProfilesData = derive2 { name="antiProfilesData"; version="1.24.0"; sha256="1rrw4s2nzyqf6fryl356nn0928lqrd0igknqjsv1v05iqkimr81j"; depends=[Biobase]; };
aracne_networks = derive2 { name="aracne.networks"; version="1.14.0"; sha256="1463x7qn32vhv3sglz6zdg5ld4fna6f6sgbggrljj5965ad836vq"; depends=[viper]; };
bcellViper = derive2 { name="bcellViper"; version="1.24.0"; sha256="15sjqfxggvh937c4w7rw7wnywb5876809kj4amv7vi0sg868jiv0"; depends=[Biobase]; };
beadarrayExampleData = derive2 { name="beadarrayExampleData"; version="1.26.0"; sha256="1r678xrzb6i6j8fr75b2pf9vns9w4kwicg9kf513a7a83b075n4k"; depends=[beadarray Biobase]; };
benchmarkfdrData2019 = derive2 { name="benchmarkfdrData2019"; version="1.2.0"; sha256="0yjvb8qih0fpp93pf5w3ilrpsm1vzqhmcjhb1sqd7875jpas9a4d"; depends=[ExperimentHub SummarizedExperiment]; };
beta7 = derive2 { name="beta7"; version="1.26.0"; sha256="1nf8wds7mksjyyrfvvs3q501mm5van7jbsfxyna27bv0dmbcv49c"; depends=[marray]; };
biotmleData = derive2 { name="biotmleData"; version="1.12.0"; sha256="1bdn1j4f6cfpncbgnzmrgb1jnffn5pxjznj8nyjdzyapgz6gy4d9"; depends=[]; };
biscuiteerData = derive2 { name="biscuiteerData"; version="1.2.0"; sha256="0dd4kym1gxkjlf1s4lcjsxikvanzbnvqphxin9zb3j99wi7h98f8"; depends=[AnnotationHub curl ExperimentHub]; };
bladderbatch = derive2 { name="bladderbatch"; version="1.26.0"; sha256="1xlqi32a5b84m31xn9x8sgrsdprylk8w2prbdn2y2lj75vyqislw"; depends=[Biobase]; };
blimaTestingData = derive2 { name="blimaTestingData"; version="1.8.0"; sha256="1ibpmbyhnliiwllwdpysl1897c93l98zdi4283174r6q1w9iwnwk"; depends=[]; };
bodymapRat = derive2 { name="bodymapRat"; version="1.4.0"; sha256="1dfrm68ysqm4z90zrvxas1mf53anfrk6mji9823088lj8haabxvn"; depends=[ExperimentHub SummarizedExperiment]; };
brainImageRdata = derive2 { name="brainImageRdata"; version="1.6.0"; sha256="0146rn8hmnmvfbnmqwr20wx76k3m6qii5rsqdqmcf420zhdfasnv"; depends=[ExperimentHub]; };
breakpointRdata = derive2 { name="breakpointRdata"; version="1.6.0"; sha256="0s96amrb0z4zz1xg3dd2wf9yir3g9xlj43sbfgcffa02hr2lvql0"; depends=[]; };
breastCancerMAINZ = derive2 { name="breastCancerMAINZ"; version="1.26.0"; sha256="1bi9522c64yngil2153qsd5la6lmn41992vlzpcadq79c2gdm5sz"; depends=[]; };
breastCancerNKI = derive2 { name="breastCancerNKI"; version="1.26.0"; sha256="0lkwgp8qwd869bc7wz5vx11fjk48516waf5d5r79ch7qzic50yqa"; depends=[]; };
breastCancerTRANSBIG = derive2 { name="breastCancerTRANSBIG"; version="1.26.0"; sha256="189q6qggq08mcvj0ail7vilsiyirxwkvwhfwwrzms6lg9bdav0a5"; depends=[]; };
breastCancerUNT = derive2 { name="breastCancerUNT"; version="1.26.0"; sha256="1s6zdhdnrigfnhyjajb9m1hsi3ggg7rs3wvyfxhzdbg5v9jwlkgx"; depends=[]; };
breastCancerUPP = derive2 { name="breastCancerUPP"; version="1.26.0"; sha256="1ax8czbxh7kid1kb1p6skkiprqm1pjpyijnci4sp6pvldna5ksm9"; depends=[]; };
breastCancerVDX = derive2 { name="breastCancerVDX"; version="1.26.0"; sha256="0a147jqwkwxlcf4id75i0wpz3mp9ynhvpmyw6kq7ksagk05zv2iy"; depends=[]; };
brgedata = derive2 { name="brgedata"; version="1.10.0"; sha256="1asi6867lp17gh3j6dg1d11mgk9mkym4s00hpfscp9zlayzqaahp"; depends=[Biobase SummarizedExperiment]; };
bronchialIL13 = derive2 { name="bronchialIL13"; version="1.26.0"; sha256="11im58z1fahy2r832r00wymjbf03hbafslzc5hicd53jgscviks0"; depends=[affy]; };
bsseqData = derive2 { name="bsseqData"; version="0.26.0"; sha256="0nzfk1q35hh2k2wcsfsyvhr8n5b7rzvgqpk4ysakm7x0n3yllvr1"; depends=[bsseq]; };
cMap2data = derive2 { name="cMap2data"; version="1.24.0"; sha256="02m7r1ixmwr119xx58j7xdmrac8banm833hg1q2jclzlxqkby1iq"; depends=[]; };
cancerdata = derive2 { name="cancerdata"; version="1.26.0"; sha256="1l0vdrfxi452p79f40gkj88ikmlb0d764hz9iyfz5gcqimn4ziiw"; depends=[Biobase]; };
ccTutorial = derive2 { name="ccTutorial"; version="1.26.0"; sha256="13b7b2h0viyyrhqfr9marjpy9svbqvnfkz0hfxizg267106kvdpr"; depends=[affy Biobase Ringo topGO]; };
ccdata = derive2 { name="ccdata"; version="1.14.0"; sha256="16hzrzrq61rn0946rv7ikk5b2xy2vc7s67jsv5wlvj19s58z5ki9"; depends=[]; };
celarefData = derive2 { name="celarefData"; version="1.6.0"; sha256="0j7w6z56snrvlxpp5f47s71pmfk5xbp9fjl5sdkvas04979004if"; depends=[]; };
ceu1kg = derive2 { name="ceu1kg"; version="0.26.0"; sha256="0ll5chmqcdlj99pqiy5mdlj46igb7xkvqj8hn32m4rxx60wjkki1"; depends=[Biobase GGBase GGtools]; };
ceu1kgv = derive2 { name="ceu1kgv"; version="0.30.0"; sha256="0hrspymdgmck1nack5bc9lpkdcbp2mmh4w64xmyppw2znzknwd62"; depends=[Biobase GGBase]; };
ceuhm3 = derive2 { name="ceuhm3"; version="0.26.0"; sha256="17gkhk8z1hd6grsbqf4m7s4avnl7jn3zpmg4zh5fz6s890k0w6p8"; depends=[Biobase GGBase GGtools]; };
cgdv17 = derive2 { name="cgdv17"; version="0.26.0"; sha256="0vlv33kpimlpms14c027z2h5fwavwkdk0sz4yr4wk3mr0sdcblyv"; depends=[Biobase BiocGenerics GenomicRanges IRanges S4Vectors VariantAnnotation]; };
chipenrich_data = derive2 { name="chipenrich.data"; version="2.12.0"; sha256="1ni6lrd5pr2pz6wkf7f8b9vzsiahnn266y21rnxgr2avvdmbzn46"; depends=[AnnotationDbi BiocGenerics GenomeInfoDb GenomicRanges IRanges readr rtracklayer S4Vectors]; };
chipseqDBData = derive2 { name="chipseqDBData"; version="1.4.0"; sha256="0q5d20zhr0zdba18afbladrw4qn5vifkdpxi10xg3a50b3i0x5y2"; depends=[AnnotationHub ExperimentHub S4Vectors]; };
chromstaRData = derive2 { name="chromstaRData"; version="1.14.0"; sha256="0if9qiclyyf1jzf3fvj2kn9qs3xisi7py0vy24qqxp3wfahmnd1r"; depends=[]; };
cnvGSAdata = derive2 { name="cnvGSAdata"; version="1.24.0"; sha256="03xi5zxrmcwpnacay0j5v9fw4m3jndifyxnpc6dbv5vs64yilnqp"; depends=[cnvGSA]; };
colonCA = derive2 { name="colonCA"; version="1.30.0"; sha256="0m039gz0qic38zpmmjahbfn5yqh76win0pn2492gpr79z7jglspw"; depends=[Biobase]; };
curatedAdipoArray = derive2 { name="curatedAdipoArray"; version="1.0.0"; sha256="062nkhxscs7kvdy9aa0l6ygpjchjvjr65myabdbpn1kd6ixbhk00"; depends=[]; };
curatedAdipoChIP = derive2 { name="curatedAdipoChIP"; version="1.4.0"; sha256="1sqg4wjmr17fyv94z3gyvxvvjjpys8y89k5ihmlk6l8v995vk1wd"; depends=[ExperimentHub SummarizedExperiment]; };
curatedAdipoRNA = derive2 { name="curatedAdipoRNA"; version="1.4.0"; sha256="1arjh69ag7n8gqzpl61i9ibn0gkdl002a8rkczvp20w4fdzlz02l"; depends=[SummarizedExperiment]; };
curatedBladderData = derive2 { name="curatedBladderData"; version="1.24.0"; sha256="0j4gssv9wd5rzsx4pbhsjciy5fc87b9hhg8cia6cliyy33fg21gz"; depends=[affy]; };
curatedBreastData = derive2 { name="curatedBreastData"; version="2.16.0"; sha256="0sahjrgq9b77xki5l51pz25ky2g13m31q7b3jc6jvggz9xmx9vyy"; depends=[Biobase BiocStyle ggplot2 impute XML]; };
curatedCRCData = derive2 { name="curatedCRCData"; version="2.20.0"; sha256="0bcfa5w6sqabz35npl2vmrj35ymgciiqkcgjhplm0ngimsm9f0wn"; depends=[BiocGenerics nlme]; };
curatedMetagenomicData = derive2 { name="curatedMetagenomicData"; version="1.18.2"; sha256="02m06scv1wxvh858bpxwlvwz4lf0qmvd8246axx65d2ln5fkvrc9"; depends=[AnnotationHub Biobase dplyr ExperimentHub magrittr S4Vectors tidyr]; };
curatedOvarianData = derive2 { name="curatedOvarianData"; version="1.26.0"; sha256="0wvpbagh9v1lyc9rsvymzy38r18g23yajvis1pj0rl7wa0zk2p4x"; depends=[affy BiocGenerics]; };
curatedTCGAData = derive2 { name="curatedTCGAData"; version="1.10.0"; sha256="0f8ariq3c0xh3w1gcfp8vgmkmlx3ybfry215flq01cc523pgrka7"; depends=[AnnotationHub ExperimentHub HDF5Array MultiAssayExperiment S4Vectors SummarizedExperiment]; };
davidTiling = derive2 { name="davidTiling"; version="1.28.0"; sha256="0cqkz6rlkk2a3fsaa736s731lb3mdvpqzd6ywff2l1wkdza7n3ha"; depends=[Biobase GO_db tilingArray]; };
depmap = derive2 { name="depmap"; version="1.2.0"; sha256="0ymdfkddrl3rbini83528x2ah8lvlvy0ard9m303dkpg5b90axim"; depends=[AnnotationHub dplyr ExperimentHub]; };
derfinderData = derive2 { name="derfinderData"; version="2.6.0"; sha256="1kbdwwdn7ykrdm36bqd8hnj0rw9ikcnxwg0w1xdc5caqmxsg1w8h"; depends=[]; };
diffloopdata = derive2 { name="diffloopdata"; version="1.16.0"; sha256="03rl0ffl9103zi3mk028l79vhlpnlybx0hnl8x9fsxnqkx1rkj32"; depends=[]; };
diggitdata = derive2 { name="diggitdata"; version="1.20.0"; sha256="0wb6g9q5m2cjnxnpz2aralridmsdmd70lp1iwszdl6qc2634c2bc"; depends=[Biobase viper]; };
dorothea = derive2 { name="dorothea"; version="1.0.0"; sha256="0c8bp0fxqf2kwi196al34a4pc78y6v0lchrjw0jn29cbihs2yjax"; depends=[bcellViper dplyr magrittr]; };
dressCheck = derive2 { name="dressCheck"; version="0.26.0"; sha256="0sa5d4isv3ni6bdq1i2yskycq357272flj2wbravy4zi7xrsk7iw"; depends=[Biobase]; };
dsQTL = derive2 { name="dsQTL"; version="0.26.0"; sha256="1pkwppfkfacf8xxmdflckql8x2n6abvfdvwly1va69288ibxy1xf"; depends=[Biobase GGBase SummarizedExperiment]; };
dyebiasexamples = derive2 { name="dyebiasexamples"; version="1.28.0"; sha256="1l8628150dic4l48r8gqasxpil6552d3h9imysvznkq13j5j48wa"; depends=[GEOquery marray]; };
ecoliLeucine = derive2 { name="ecoliLeucine"; version="1.28.0"; sha256="14wwfbpdcd6ghv57hv5rfci9y3sgk0lvl2w9flss625bz50bil6c"; depends=[affy ecolicdf]; };
estrogen = derive2 { name="estrogen"; version="1.34.0"; sha256="1iqzw2ldmg4hqlwf94b8jczj83mix2znp6widjkfq5509wygq2dh"; depends=[]; };
etec16s = derive2 { name="etec16s"; version="1.16.0"; sha256="0b714kg0chq2kf7x16j6kaaqfmr5lka030dx2k0r8fr6318h5h3i"; depends=[Biobase metagenomeSeq]; };
faahKO = derive2 { name="faahKO"; version="1.28.0"; sha256="180viida7hd5xqm7h1n0chcpmpd8d5rjrkbjqpk2m2dzsqip9v36"; depends=[xcms]; };
fabiaData = derive2 { name="fabiaData"; version="1.26.0"; sha256="13ips2phn9r1y3c4lqcpcrwkh37b9b4rpikmnyyafcvs30283vad"; depends=[Biobase]; };
facsDorit = derive2 { name="facsDorit"; version="1.30.0"; sha256="1s46wk9rzzn89qvi4bz9ayb5swysg1y9rnwyqrfirq3s8wlx6bqv"; depends=[prada]; };
ffpeExampleData = derive2 { name="ffpeExampleData"; version="1.26.0"; sha256="03sxg8vhvqq96hljv115ngz4arbnjkgz7z1fgzzqckv98v699ah3"; depends=[lumi]; };
fibroEset = derive2 { name="fibroEset"; version="1.30.0"; sha256="0v0d0v31yrsakln1kq72c1imlyh3hvi6y76qr1v2bsxn607kjab2"; depends=[Biobase]; };
fission = derive2 { name="fission"; version="1.8.0"; sha256="0f20h8bx9gsz93lzfk18558r7nrdk0kakjv7kc2imz2g9sk97wki"; depends=[SummarizedExperiment]; };
flowFitExampleData = derive2 { name="flowFitExampleData"; version="1.24.0"; sha256="1n4aix1s0aq8va0b22s4crhj0v7gv4yw42qfq51sk3r4ym05nixp"; depends=[flowCore]; };
flowPloidyData = derive2 { name="flowPloidyData"; version="1.14.0"; sha256="1rqa38p3gwackzac2zjligbckplnqm6vrva0qny68c33kzpkrlay"; depends=[]; };
flowWorkspaceData = derive2 { name="flowWorkspaceData"; version="3.0.0"; sha256="0nwbscj298jdnv8wn8863jpj3hps1p2ndfxr5h4dgsjn0bn4cfm1"; depends=[]; };
frmaExampleData = derive2 { name="frmaExampleData"; version="1.24.0"; sha256="12yfl9qx9n59skfavzlbdfxd1xjwlwf1q3ssbj6fs0c0dvfpfwhn"; depends=[]; };
furrowSeg = derive2 { name="furrowSeg"; version="1.16.0"; sha256="02y8npnh9b5dbykivhvncd50kq0wvca04jljqynlby1qdvd3ywxj"; depends=[abind dplyr EBImage locfit tiff]; };
gageData = derive2 { name="gageData"; version="2.26.0"; sha256="13l6hb7a0aqvdgd3lxq8zslw1srgvk9xkyf0r8qc4jygyrk1hcsv"; depends=[]; };
gaschYHS = derive2 { name="gaschYHS"; version="1.26.0"; sha256="05zc0iddwzbzai29mhp0gh8an30dz9yb24p0kgi1f9ma05w2qvbm"; depends=[Biobase]; };
gatingMLData = derive2 { name="gatingMLData"; version="2.28.0"; sha256="0bbyn9sx51hnsklyqy6p3x0wsaj05pgsmaqfnskadg4gmisds0v9"; depends=[]; };
gcspikelite = derive2 { name="gcspikelite"; version="1.26.0"; sha256="11bfn34l8fw0jsl9vy2cvv9nk5ha6ribwksr0lqmiv3k78x4vnlq"; depends=[]; };
geneLenDataBase = derive2 { name="geneLenDataBase"; version="1.24.0"; sha256="19d85x6wqwrbh3hv61qynxy0g7n9y07jr127n9h3rjhh49h0i10k"; depends=[GenomicFeatures rtracklayer]; };
genomationData = derive2 { name="genomationData"; version="1.20.0"; sha256="109z4sd82w0r5ncw46y4s53r9m666pc55ih79sifglbr3c8g6gp4"; depends=[]; };
geuvPack = derive2 { name="geuvPack"; version="1.20.0"; sha256="194r713sd5bhkbn3wfqfzh8a65q13b9jphgn8yxylnpk7vhqfiki"; depends=[SummarizedExperiment]; };
geuvStore2 = derive2 { name="geuvStore2"; version="1.18.0"; sha256="0m6jsgh2jd926v5q436affk3bb4smxmagpa23aghzlm997vz936h"; depends=[BatchJobs GenomicRanges gQTLBase]; };
golubEsets = derive2 { name="golubEsets"; version="1.30.0"; sha256="1xqi93b0hvmm9hfmwfzhgjz8sixs6zgb6ii1pv50892r804644d1"; depends=[Biobase]; };
gpaExample = derive2 { name="gpaExample"; version="1.0.0"; sha256="1cgp4a02rq8afijg8gib628vvvcj9285f9x6ww1njrggs4x8s0i6"; depends=[]; };
grndata = derive2 { name="grndata"; version="1.20.0"; sha256="1lk8pbqsgqpa2fxdz0inihifi5g8cgbziqclkghj4f0c0f8nv5rz"; depends=[]; };
gskb = derive2 { name="gskb"; version="1.20.0"; sha256="1awjyghsxsdjhnb14dx8wk7j4lggqlpbvm9gsdk7jr16kjfj0wi0"; depends=[]; };
h5vcData = derive2 { name="h5vcData"; version="2.8.0"; sha256="18bp4gydmlikbkjbyzj3kcqbb6srajlxfdzx0z50lvjgfy8ix18d"; depends=[]; };
hapmap100khind = derive2 { name="hapmap100khind"; version="1.30.0"; sha256="0lmz6a10m4bszj0phihkq0m90agvvvlvan40ay2awig060dl0cip"; depends=[]; };
hapmap100kxba = derive2 { name="hapmap100kxba"; version="1.30.0"; sha256="0wqv1x4ip2d93r1wl420vpc034xk2qn7fksgk8mbq2lfzbnc48gm"; depends=[]; };
hapmap500knsp = derive2 { name="hapmap500knsp"; version="1.30.0"; sha256="01pddayc866c9mw7mb74nihym1cq4dgiz86liw2i3qk9n9yilv7f"; depends=[]; };
hapmap500ksty = derive2 { name="hapmap500ksty"; version="1.30.0"; sha256="05qbicnp3p36gi8dpjmvv71xv7cf7zf6avkg5mw9y8cfd9bqmng0"; depends=[]; };
hapmapsnp5 = derive2 { name="hapmapsnp5"; version="1.30.0"; sha256="0q84yxfvspqnk3ak8fxpa7ibld1bmyg7vp8gdrwdjdp6f1xkmk83"; depends=[]; };
hapmapsnp6 = derive2 { name="hapmapsnp6"; version="1.30.0"; sha256="0y5y1g4j434q9dl0893sm80z15rphhda1x1dxywi9z9y689y19dh"; depends=[]; };
harbChIP = derive2 { name="harbChIP"; version="1.26.0"; sha256="1hqh721di5fxzhpj9a0iljzprzxlyg76z6pxgyfslmc7bccxmld7"; depends=[Biobase Biostrings IRanges]; };
healthyFlowData = derive2 { name="healthyFlowData"; version="1.26.0"; sha256="1w7w36phhplm5qvm0s1mb7hzgw2yb5bhpkj8mdkwj623763nqxwx"; depends=[flowCore]; };
hgu133abarcodevecs = derive2 { name="hgu133abarcodevecs"; version="1.26.0"; sha256="0kvki0fz5nmwf729mx4r7a94cmg0s14qndp20z19mpcxrdp2whqs"; depends=[]; };
hgu133plus2CellScore = derive2 { name="hgu133plus2CellScore"; version="1.8.0"; sha256="174vl57gciqc4awpbkkma0dx4cv7i5cy6g18403yz5sci8xp2qyv"; depends=[Biobase]; };
hgu133plus2barcodevecs = derive2 { name="hgu133plus2barcodevecs"; version="1.26.0"; sha256="0diy6ljvhb0mwfhj3dphk868pxz7s33mq6mwjylayh4imhpakxrz"; depends=[]; };
hgu2beta7 = derive2 { name="hgu2beta7"; version="1.28.0"; sha256="0f4kd2zmy1apxl8b7axjkcwc5l8x0nf9d5c688cszlnxlh8np4gb"; depends=[]; };
hmyriB36 = derive2 { name="hmyriB36"; version="1.24.0"; sha256="1gh0jhnlljnbzsqrvz4ssrbsv572fivwkg78dkiqrbrx9vjab6g7"; depends=[Biobase GGBase]; };
humanStemCell = derive2 { name="humanStemCell"; version="0.28.0"; sha256="0fsa92p8z8df3db8chpld22c9yn78cwdn72n47fy5l51caw0v6z9"; depends=[Biobase hgu133plus2_db]; };
kidpack = derive2 { name="kidpack"; version="1.30.0"; sha256="0kpa3q9plvskynlww6fnk6mv34z5p900wgx8hxkgdknxmx5ihswn"; depends=[Biobase]; };
leeBamViews = derive2 { name="leeBamViews"; version="1.24.0"; sha256="0l6cyf4a1b93pqlhlvi98yhdjby4rfcmdxvrrn8fpy5w8mjwmv4x"; depends=[Biobase BSgenome GenomicAlignments GenomicRanges IRanges Rsamtools S4Vectors]; };
leukemiasEset = derive2 { name="leukemiasEset"; version="1.24.0"; sha256="05jw1l8bky88hc2gkrs032a51p07kfcwplfw2s4qn14qm90cq680"; depends=[Biobase]; };
lumiBarnes = derive2 { name="lumiBarnes"; version="1.28.0"; sha256="1k17yy1hy0x5v8ywv4w6vd1kzx0z9mcn0c26sk2qzzmcr2hnx7xj"; depends=[Biobase lumi]; };
lungExpression = derive2 { name="lungExpression"; version="0.26.0"; sha256="0ryidn0kyxj5ms3yzhln9jizx3vpmxb1x60hr11v3435pw1ihra1"; depends=[Biobase]; };
lydata = derive2 { name="lydata"; version="1.14.0"; sha256="1hcgkvgbs6rmj1a874hs4j3wdq9gc4pmfg4i6fhik4ykjv5r583j"; depends=[]; };
mAPKLData = derive2 { name="mAPKLData"; version="1.20.0"; sha256="1psg6jsvlkna1dc5pjzkzy4g3cvxxl0fwzgpbfmhd4wjms4v42xa"; depends=[]; };
mCSEAdata = derive2 { name="mCSEAdata"; version="1.8.0"; sha256="1yspzyl3cg4i6x42vi9bk0cb74sxcb001pvm3hl3kcz52pqbabdm"; depends=[]; };
macrophage = derive2 { name="macrophage"; version="1.4.0"; sha256="0q9k2xbp7g1cixain59p244afnhia5ps52fdsnsyc6ca380vhrks"; depends=[]; };
mammaPrintData = derive2 { name="mammaPrintData"; version="1.24.0"; sha256="1k2v131sqnglffp9w1s76g4i246xghw59l6rbgzq0k6ala58dyzi"; depends=[]; };
maqcExpression4plex = derive2 { name="maqcExpression4plex"; version="1.32.0"; sha256="01015f7f1fa56pfy78c9zjxszc379rsqjxkbhwx6bzr1d0pvfq0c"; depends=[]; };
mcsurvdata = derive2 { name="mcsurvdata"; version="1.6.0"; sha256="04c7z4nal5brgjc3ap3ycgyfws6saxkxdzid2rqzb1h13zk42ahb"; depends=[AnnotationHub Biobase ExperimentHub]; };
metaMSdata = derive2 { name="metaMSdata"; version="1.24.0"; sha256="0ha2sl75xk8xf3d6cw5hdiqad0ymiva3maq0cn3c5mgv083dj6xr"; depends=[]; };
methyvimData = derive2 { name="methyvimData"; version="1.10.0"; sha256="0jxpahqxsbnk3spmc4nm31kxxyvai62mlh2ihfkfcslmrccf1k5a"; depends=[minfi]; };
miRNATarget = derive2 { name="miRNATarget"; version="1.26.0"; sha256="12bp0s6djpp262l1vlyg9sn01yzydz7b0hf183wmnr8568n91dln"; depends=[Biobase]; };
miRcompData = derive2 { name="miRcompData"; version="1.18.0"; sha256="1jw46vwibiggwdi36a164ib1v04hibrxyxp63qsmqxn38rz7g8fs"; depends=[]; };
microRNAome = derive2 { name="microRNAome"; version="1.10.0"; sha256="16v2p376v8aawb31ss6mmcf1mip0hyj3740jd6r8w3dvkvjs877p"; depends=[SummarizedExperiment]; };
minfiData = derive2 { name="minfiData"; version="0.34.0"; sha256="0qcky2k39amjdincb3d29x8xf6sm2vn7643vvkx0jpbfqv5pn9cz"; depends=[IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest minfi]; };
minfiDataEPIC = derive2 { name="minfiDataEPIC"; version="1.14.0"; sha256="0c7i4830x41wgg0qj3nal6s6am0wnpr3hgyb8i14fip0168xdyfp"; depends=[IlluminaHumanMethylationEPICanno_ilm10b2_hg19 IlluminaHumanMethylationEPICmanifest minfi]; };
minionSummaryData = derive2 { name="minionSummaryData"; version="1.18.0"; sha256="01j2wh9bl8v4xm8gsv620f6idrwpycs81kxgq4n4y9padqm12d1a"; depends=[]; };
mitoODEdata = derive2 { name="mitoODEdata"; version="1.24.1"; sha256="1nsf0ydpb9gwsl8907srgscsaicpcvashy9x4akadlblk5f1sm6w"; depends=[]; };
mosaicsExample = derive2 { name="mosaicsExample"; version="1.26.0"; sha256="094nvpimnz8i6qscbzzx63zkq3vwh4bahd9wh37jc66m33nx6xna"; depends=[]; };
mouse4302barcodevecs = derive2 { name="mouse4302barcodevecs"; version="1.26.0"; sha256="1ni7pz1417a05dzwh51212g8dza828wd2gbvzxjdwamlsadqzq7v"; depends=[]; };
msPurityData = derive2 { name="msPurityData"; version="1.16.0"; sha256="1vv4cifbr3rc13xrjfb0vbrkrinr2kwci8xcyjzwcbpch849izai"; depends=[]; };
msd16s = derive2 { name="msd16s"; version="1.8.0"; sha256="0cwyd01mxy4h8irgg7r98b66f2cgnir9yh7zdbplrd4jrm3kdjjk"; depends=[Biobase metagenomeSeq]; };
msdata = derive2 { name="msdata"; version="0.28.0"; sha256="1grhjfb7bchvm6y9yx7hj9ssj8jsyhgvl1imr8zpx4zmsryvsy8m"; depends=[]; };
msqc1 = derive2 { name="msqc1"; version="1.16.0"; sha256="0qfyds4wvbw3c7zhwnmq24cx9jxrlsvzh4mnks09md70vliwbiy9"; depends=[lattice]; };
mtbls2 = derive2 { name="mtbls2"; version="1.18.0"; sha256="0fnz9i66y7y9zksxkjqnrk8p4pq5vdv8bnkpr03imsr4jdbvr882"; depends=[]; };
muscData = derive2 { name="muscData"; version="1.2.0"; sha256="1w3r42al6nl2hi6dkg8mp9kxpif15nrhap65b3mnlpncf5nd8ck4"; depends=[ExperimentHub SingleCellExperiment]; };
mvoutData = derive2 { name="mvoutData"; version="1.24.0"; sha256="0kb0kj1cklyc7z0kx4vm8s16sp0xcichdwdadjq9r8yckxwy9qfv"; depends=[affy Biobase lumi]; };
nanotubes = derive2 { name="nanotubes"; version="1.4.0"; sha256="0dyxi22c5mzk97v8rg5mlwi9ikcd2x178s5phzkpnbzd0sl3n0yf"; depends=[]; };
netDx_examples = derive2 { name="netDx.examples"; version="0.99.3"; sha256="0m9wq6a0i0rjx5jchkgbpl6aypsvcnzl7mnqqzvqzk7p1jf3gc0f"; depends=[]; };
oct4 = derive2 { name="oct4"; version="1.4.0"; sha256="1xy1gv42b8z3bbghzakfr4y6kqccy3n7x8r0b6r9nznji1qx5n4h"; depends=[]; };
optimalFlowData = derive2 { name="optimalFlowData"; version="1.0.0"; sha256="0akka98nq5jk16k9472lnwjj6bgygng71x2l29ihykzn1ml9wyrp"; depends=[]; };
pRolocdata = derive2 { name="pRolocdata"; version="1.26.0"; sha256="16w75i2bj4qjidzxx1gnlsxc68iv4kp3sj61c1r1lli4dzbcss7z"; depends=[Biobase MSnbase]; };
parathyroidSE = derive2 { name="parathyroidSE"; version="1.26.0"; sha256="1bd6cmpfsk4216drziflki4i3ys7jl2bb0jbsc4727zawxa9xqh8"; depends=[SummarizedExperiment]; };
pasilla = derive2 { name="pasilla"; version="1.16.0"; sha256="08limpq4hjri0d7s7sb0m4zhla4gaswmk0hmrnpq0i3bpdw3cp5c"; depends=[]; };
pasillaBamSubset = derive2 { name="pasillaBamSubset"; version="0.26.0"; sha256="1rb67ba9lhavmg4ffc5vy37fl7a47c8zq0y9h3ra7wx10hgrwxgs"; depends=[]; };
pathprintGEOData = derive2 { name="pathprintGEOData"; version="1.18.0"; sha256="07zahrfaw6jdb5yc33pj07shc1x5ddvszxvd9228iizhjcy0sp2m"; depends=[]; };
pcaGoPromoter_Hs_hg19 = derive2 { name="pcaGoPromoter.Hs.hg19"; version="1.24.0"; sha256="1vgxwfwrx8ar32r9axbvs22vvswq0hx1xmxg4y03i4l49jjam0id"; depends=[]; };
pcaGoPromoter_Mm_mm9 = derive2 { name="pcaGoPromoter.Mm.mm9"; version="1.24.0"; sha256="0vvrs29v8vgiph6dp0zwny9z1wyak34pafmnmcsilki9nv62amrp"; depends=[]; };
pcaGoPromoter_Rn_rn4 = derive2 { name="pcaGoPromoter.Rn.rn4"; version="1.24.0"; sha256="1mqykfd8xkd254pa18n94z2ypk1rvh4g7sx54igz0kv7d0hc2rca"; depends=[]; };
pcxnData = derive2 { name="pcxnData"; version="2.10.0"; sha256="0dsagapcrad7k5ar48rg43vslxvrw1rwlfz135sgqvy81c97df1f"; depends=[]; };
pd_atdschip_tiling = derive2 { name="pd.atdschip.tiling"; version="0.26.0"; sha256="1hd8qy82ks584z504m8r3gq4dxi19k8qw1d8vlfd8k6iis6wa82f"; depends=[Biostrings DBI IRanges oligo oligoClasses RSQLite S4Vectors]; };
pepDat = derive2 { name="pepDat"; version="1.8.0"; sha256="1fmrgma2xl2v6g3nda6kiizgw6lxfh0bi9vfqyarg08mj2m7yipy"; depends=[GenomicRanges]; };
plasFIA = derive2 { name="plasFIA"; version="1.16.0"; sha256="0bnwappr5n0db0595swl4f35cd31j3a2kzp1xmyddxm3xwr364ps"; depends=[proFIA]; };
ppiData = derive2 { name="ppiData"; version="0.26.0"; sha256="13ks4rpm25bnbhqyfqqw27af6px0jwr2mn16fid3j4lg7dr5c0qs"; depends=[AnnotationDbi graph]; };
prebsdata = derive2 { name="prebsdata"; version="1.24.0"; sha256="0i7szry1chh8x7p1xynnzc9m917z7p0w031a6b5f6ffcih6p3g8s"; depends=[]; };
prostateCancerCamcap = derive2 { name="prostateCancerCamcap"; version="1.16.0"; sha256="0mw6hna1avp7ihbyw75z157g7ssxwbigglhvcx52aj37bnlw82r2"; depends=[Biobase]; };
prostateCancerGrasso = derive2 { name="prostateCancerGrasso"; version="1.16.0"; sha256="1kv8a53gkibr320xq5h26v7ilw5pjqcrsp2h18wqaw0cyi3s0wn8"; depends=[Biobase]; };
prostateCancerStockholm = derive2 { name="prostateCancerStockholm"; version="1.16.0"; sha256="10cbzs3azz4hxpxhjaf4mgqpwf3b46b60arm2z2fyf5hgmxvh1ly"; depends=[Biobase]; };
prostateCancerTaylor = derive2 { name="prostateCancerTaylor"; version="1.16.0"; sha256="14axk66vb1kkis27qg8nnq1ssdxxlqazvz574vjxrs31pwlawpiv"; depends=[Biobase]; };
prostateCancerVarambally = derive2 { name="prostateCancerVarambally"; version="1.16.0"; sha256="0cib5p853rz5j3l9x752h62fsyrvv1i61v6nnacrmbzi4k9b1w68"; depends=[Biobase]; };
pumadata = derive2 { name="pumadata"; version="2.24.0"; sha256="1jal8j50z6lc9qvydnlsklvghp2zc24zk3g2lbsn0k1ahrsxhx3q"; depends=[Biobase oligo puma]; };
pwrEWAS_data = derive2 { name="pwrEWAS.data"; version="1.2.0"; sha256="02aq2sqilz11sknbwkdfca7gw95i4x5mf2n477kzn09dhiplq1l9"; depends=[ExperimentHub]; };
qPLEXdata = derive2 { name="qPLEXdata"; version="1.6.0"; sha256="16jzij7cmiagxb0cp2pyna8s424kx3gz55b6v2qsssm9apy77bg3"; depends=[dplyr knitr MSnbase qPLEXanalyzer]; };
rRDPData = derive2 { name="rRDPData"; version="1.8.0"; sha256="09n5289fk5mq1q9skfzmg4rxq66l68k5rv72pz256p7k5xslxx2y"; depends=[rRDP]; };
rcellminerData = derive2 { name="rcellminerData"; version="2.10.0"; sha256="0v8aj14pwjm60rvnk9nsp02m3vavhn6l49ny0k0rmdrq79bvyymn"; depends=[Biobase]; };
restfulSEData = derive2 { name="restfulSEData"; version="1.10.0"; sha256="0l4qamp6x2g5k2bix0mlxpv344yqzz3ap80zdw4b2jgdlq9gvfgg"; depends=[ExperimentHub SummarizedExperiment]; };
rheumaticConditionWOLLBOLD = derive2 { name="rheumaticConditionWOLLBOLD"; version="1.26.0"; sha256="1bsv8i3xapkpga04388598slqqjwpkh9nh3vy9q4ibj14wnmcf0w"; depends=[]; };
sampleClassifierData = derive2 { name="sampleClassifierData"; version="1.12.0"; sha256="1v5qi6fh86snfpw4q0lqi0sznfdqv5d95a07bsdqf3g4p6saalxd"; depends=[SummarizedExperiment]; };
scRNAseq = derive2 { name="scRNAseq"; version="2.2.0"; sha256="0hcxwaf0y7in611bnl1lawnklwy6f71g6p8ci7s7s1anzm421dqx"; depends=[BiocGenerics ExperimentHub GenomicRanges S4Vectors SingleCellExperiment SummarizedExperiment]; };
scTHI_data = derive2 { name="scTHI.data"; version="1.0.0"; sha256="0wpjlyipp9d50k0mrvmgffcwxc7k3fai736scvch0pa0g6kk2pg0"; depends=[]; };
seq2pathway_data = derive2 { name="seq2pathway.data"; version="1.20.0"; sha256="12sqw6wi65g33can65blcdb0wf8qn91p49sxyiprq9wa5bbkmk2b"; depends=[]; };
seqCNA_annot = derive2 { name="seqCNA.annot"; version="1.24.0"; sha256="1y16cfrrfsn30fp4vxmlk348zlrq5m2k6kidi00gayd49l0q99g7"; depends=[]; };
seqc = derive2 { name="seqc"; version="1.22.0"; sha256="0b9aqj9mxkxdbgrc0i010nizpl6gvna2dla817135z7zzdqic8lw"; depends=[Biobase]; };
serumStimulation = derive2 { name="serumStimulation"; version="1.24.0"; sha256="0qx21q874k6vg8i7kwhajlhvrb6z4xlmrzrs0asd180f2vx2g2w2"; depends=[]; };
sesameData = derive2 { name="sesameData"; version="1.6.0"; sha256="0fyiwd2sfqdyb1msm4clz8lwbxlw4dfl83kkj25xmp5hh2dh915a"; depends=[AnnotationHub curl ExperimentHub]; };
seventyGeneData = derive2 { name="seventyGeneData"; version="1.24.0"; sha256="1rla88mcnpl0w3k0szbhzzkbc786fq67vqyqwv2aq9f4nssjw95k"; depends=[]; };
shinyMethylData = derive2 { name="shinyMethylData"; version="1.8.0"; sha256="19wfry1xx7kvl5mrmn4pv4amlv035nl73ni58qa6s5kwxzklpavn"; depends=[]; };
signatureSearchData = derive2 { name="signatureSearchData"; version="1.2.1"; sha256="0q5p2g3im5nyngpdfdvk4xm1fp064cgavjrx7pf1q2fkijc3m07a"; depends=[affy Biobase dplyr ExperimentHub limma magrittr R_utils rhdf5 signatureSearch]; };
simpIntLists = derive2 { name="simpIntLists"; version="1.24.0"; sha256="1sxscydcd43xlyxr4rn3rmjc9hmwvqzrqw40ihmkva0ld8r635n1"; depends=[]; };
spatialLIBD = derive2 { name="spatialLIBD"; version="1.0.0"; sha256="0yx12mcrmb2g6sjnk1ajclnc0z3i2aps2snw85gyanaad5l1igq5"; depends=[AnnotationHub benchmarkme cowplot DT ExperimentHub fields ggplot2 golem IRanges plotly png Polychrome RColorBrewer S4Vectors scater sessioninfo shiny shinyWidgets SingleCellExperiment SummarizedExperiment viridisLite]; };
spqnData = derive2 { name="spqnData"; version="1.0.0"; sha256="19sisn5l3nvz2nr400jgz5clcj0iygk17xhpsjqgswi9p43a3k9z"; depends=[SummarizedExperiment]; };
stemHypoxia = derive2 { name="stemHypoxia"; version="1.24.0"; sha256="03kzrmdlixi31k6jfjhcn4dkm5g16rbd315ws4pqilpdwhgmrlff"; depends=[]; };
stjudem = derive2 { name="stjudem"; version="1.28.0"; sha256="07cbpxzc78asjm41rx5nl4gyzczp7j293ih86ins31r65grwjwm3"; depends=[]; };
synapterdata = derive2 { name="synapterdata"; version="1.26.0"; sha256="0a1k831pw0sl0blr1iy5is0s06sw4kadb30prd0h2l2z8s6ldarm"; depends=[synapter]; };
systemPipeRdata = derive2 { name="systemPipeRdata"; version="1.16.1"; sha256="1rjh7ki3kczfx2f5vfrmbd6gwjm0f4dpm845x79fxy4k4sfb9zq2"; depends=[BiocGenerics devtools]; };
tartare = derive2 { name="tartare"; version="1.2.0"; sha256="0v4s0xbxqrv8syihn1ahcrak8gsyklxl3xnzfy4dmqz6bzarpcgd"; depends=[AnnotationHub ExperimentHub]; };
tcgaWGBSData_hg19 = derive2 { name="tcgaWGBSData.hg19"; version="1.6.0"; sha256="06f4xi2lh8idv7h5hmrmlha71k0dxc4s07apc2lj27l2wpm5dp85"; depends=[bsseq ExperimentHub knitr]; };
tinesath1cdf = derive2 { name="tinesath1cdf"; version="1.26.0"; sha256="04f3wy2k884vxyij1yrivxb6jymkh2j7byh0qzmkq2gs9k2lbrka"; depends=[]; };
tinesath1probe = derive2 { name="tinesath1probe"; version="1.26.0"; sha256="05rbyhcqp5czcnhz6rw6jii212ggpixgclik5bq0j8418mgvq4rs"; depends=[AnnotationDbi]; };
tissueTreg = derive2 { name="tissueTreg"; version="1.8.0"; sha256="1qgn9c14hy6n79rdyzhj1baqf3wkmmc8nwdfg2aw65ccf3fr8mkb"; depends=[]; };
tofsimsData = derive2 { name="tofsimsData"; version="1.16.0"; sha256="0wi2963il55fjmcs5r6bwhi73h96dv3j706fq42x2z9053y5vn92"; depends=[]; };
topdownrdata = derive2 { name="topdownrdata"; version="1.10.0"; sha256="0afjn3jawalnrfd0aqa2lm56q4j5c42ah2lfrb7k6bl0a731x0yn"; depends=[topdownr]; };
tweeDEseqCountData = derive2 { name="tweeDEseqCountData"; version="1.26.0"; sha256="1iszm7cqx30d1nnl1l7xlqvn18kvgb6q4d1cspjnd1l8x2cf6h3d"; depends=[Biobase]; };
tximportData = derive2 { name="tximportData"; version="1.16.0"; sha256="0vscg9qz6hf20sbaghsza1gkcch4vm0h93wwxhmsm9vnb0j9y06n"; depends=[]; };
vulcandata = derive2 { name="vulcandata"; version="1.10.0"; sha256="1zah7palpk8b0r9nfivcf5w2sjvr27vgvazswbcs53shm056ry75"; depends=[]; };
waveTilingData = derive2 { name="waveTilingData"; version="1.24.0"; sha256="0vx702xi32a4735pygya406wqk7ypn363mp3agb1cby0bh6p72qk"; depends=[]; };
yeastCC = derive2 { name="yeastCC"; version="1.28.0"; sha256="1sfw59kv88mp1wf9rrib477xf9krw0crs3sikg8zpki1c2v06ihm"; depends=[Biobase]; };
yeastExpData = derive2 { name="yeastExpData"; version="0.34.0"; sha256="00bf71za2m03njy3a0sh78x1b690nh07z6g52s52hgv35fihapk7"; depends=[graph]; };
yeastGSData = derive2 { name="yeastGSData"; version="0.26.0"; sha256="109zl3n5cs2dmdwkgh34sqsghb6kywpg4mgr7qqf0iaisdcydix1"; depends=[]; };
yeastNagalakshmi = derive2 { name="yeastNagalakshmi"; version="1.24.0"; sha256="0066r4hk0fgidg0q09fq4lldkm2d889z7xjg0zlfmnhnn7jv68hf"; depends=[]; };
yeastRNASeq = derive2 { name="yeastRNASeq"; version="0.26.0"; sha256="0pvkrgwca7aqk833jp0d0dnz1kjhzl7zabbkaszqb659aq985z8m"; depends=[]; };
yri1kgv = derive2 { name="yri1kgv"; version="0.30.0"; sha256="1bhw9gnr8291gyrg8bak2nzzgqgfgxvxwlcjd3v8w0a87qjrlsih"; depends=[Biobase GGBase]; };
yriMulti = derive2 { name="yriMulti"; version="0.18.0"; sha256="049armafqigkw7b8yfi9lfy2wggib0sx42w0bi9qaq4f9lhdf6ia"; depends=[dsQTL GenomeInfoDb GenomicFiles GenomicRanges geuvPack gQTLBase Homo_sapiens MultiAssayExperiment SummarizedExperiment VariantAnnotation]; };
zebrafishRNASeq = derive2 { name="zebrafishRNASeq"; version="1.8.0"; sha256="0bz043yz0v78z7lildrcap9gwlqp550yclbax3lmydmkimic3hgq"; depends=[]; };
}

3516
third_party/nixpkgs/pkgs/development/r-modules/bioc-packages.nix generated vendored
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File diff suppressed because it is too large Load diff

6259
third_party/nixpkgs/pkgs/development/r-modules/cran-packages.nix generated vendored
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File diff suppressed because it is too large Load diff

45
third_party/nixpkgs/pkgs/development/r-modules/default.nix vendored
View file

@ -230,7 +230,6 @@ let
};
packagesWithNativeBuildInputs = {
abn = [ pkgs.gsl_1 ];
adimpro = [ pkgs.imagemagick ];
animation = [ pkgs.which ];
audio = [ pkgs.portaudio ];
@ -281,7 +280,6 @@ let
ncdf4 = [ pkgs.netcdf ];
nloptr = [ pkgs.nlopt pkgs.pkgconfig ];
odbc = [ pkgs.unixODBC ];
outbreaker = [ pkgs.gsl_1 ];
pander = [ pkgs.pandoc pkgs.which ];
pbdMPI = [ pkgs.openmpi ];
pbdNCDF4 = [ pkgs.netcdf ];
@ -293,8 +291,6 @@ let
png = [ pkgs.libpng.dev ];
proj4 = [ pkgs.proj ];
protolite = [ pkgs.protobuf ];
qtbase = [ pkgs.qt4 ];
qtpaint = [ pkgs.qt4 ];
R2SWF = [ pkgs.zlib pkgs.libpng pkgs.freetype.dev ];
RAppArmor = [ pkgs.libapparmor ];
rapportools = [ pkgs.which ];
@ -307,13 +303,12 @@ let
reprex = [ pkgs.which ];
rgdal = [ pkgs.proj.dev pkgs.gdal ];
rgeos = [ pkgs.geos ];
rggobi = [ pkgs.ggobi pkgs.gtk2.dev pkgs.libxml2.dev ];
Rglpk = [ pkgs.glpk ];
RGtk2 = [ pkgs.gtk2.dev ];
rhdf5 = [ pkgs.zlib ];
Rhdf5lib = [ pkgs.zlib ];
Rhpc = [ pkgs.zlib pkgs.bzip2.dev pkgs.icu pkgs.lzma.dev pkgs.openmpi pkgs.pcre.dev ];
Rhtslib = [ pkgs.zlib.dev pkgs.automake pkgs.autoconf ];
Rhtslib = [ pkgs.zlib.dev pkgs.automake pkgs.autoconf pkgs.bzip2.dev pkgs.lzma.dev pkgs.curl.dev ];
rjags = [ pkgs.jags ];
rJava = [ pkgs.zlib pkgs.bzip2.dev pkgs.icu pkgs.lzma.dev pkgs.pcre.dev pkgs.jdk pkgs.libzip ];
Rlibeemd = [ pkgs.gsl_1 ];
@ -353,7 +348,6 @@ let
TAQMNGR = [ pkgs.zlib.dev ];
tesseract = [ pkgs.tesseract pkgs.leptonica ];
tiff = [ pkgs.libtiff.dev ];
TKF = [ pkgs.gsl_1 ];
tkrplot = [ pkgs.xorg.libX11 pkgs.tk.dev ];
topicmodels = [ pkgs.gsl_1 ];
udunits2 = [ pkgs.udunits pkgs.expat ];
@ -371,10 +365,10 @@ let
gmapR = [ pkgs.zlib.dev ];
Rsubread = [ pkgs.zlib.dev ];
XVector = [ pkgs.zlib.dev ];
Rsamtools = [ pkgs.zlib.dev ];
Rsamtools = [ pkgs.zlib.dev pkgs.curl.dev ];
rtracklayer = [ pkgs.zlib.dev ];
affyio = [ pkgs.zlib.dev ];
VariantAnnotation = [ pkgs.zlib.dev ];
VariantAnnotation = [ pkgs.zlib.dev pkgs.curl.dev ];
snpStats = [ pkgs.zlib.dev ];
};
@ -391,12 +385,9 @@ let
pbdZMQ = lib.optionals stdenv.isDarwin [ pkgs.darwin.binutils ];
RMark = [ pkgs.which ];
RPushbullet = [ pkgs.which ];
qtpaint = [ pkgs.cmake ];
qtbase = [ pkgs.cmake pkgs.perl ];
RcppEigen = [ pkgs.libiconv ];
RCurl = [ pkgs.curl.dev ];
R2SWF = [ pkgs.pkgconfig ];
rggobi = [ pkgs.pkgconfig ];
rgl = [ pkgs.libGLU pkgs.libGLU.dev pkgs.libGL pkgs.xlibsWrapper ];
RGtk2 = [ pkgs.pkgconfig ];
RProtoBuf = [ pkgs.pkgconfig ];
@ -458,9 +449,7 @@ let
"AnthropMMD"
"aplpack"
"asbio"
"AtelieR"
"BAT"
"bayesDem"
"BCA"
"betapart"
"BiodiversityR"
@ -495,7 +484,6 @@ let
"dynBiplotGUI"
"EasyqpcR"
"EcoVirtual"
"ENiRG"
"exactLoglinTest"
"fat2Lpoly"
"fbati"
@ -505,7 +493,6 @@ let
"FFD"
"fgui"
"fisheyeR"
"fit4NM"
"forams"
"forensim"
"FreeSortR"
@ -518,15 +505,12 @@ let
"GGEBiplotGUI"
"gnm"
"GPCSIV"
"GrammR"
"GrapheR"
"GroupSeq"
"gsubfn"
"GUniFrac"
"gWidgets2RGtk2"
"gWidgets2tcltk"
"gWidgetsRGtk2"
"gWidgetstcltk"
"HH"
"HiveR"
"ic50"
@ -542,14 +526,10 @@ let
"LS2Wstat"
"MareyMap"
"memgene"
"MergeGUI"
"metacom"
"Meth27QC"
"MetSizeR"
"MicroStrategyR"
"migui"
"miniGUI"
"MissingDataGUI"
"mixsep"
"MplusAutomation"
"mpmcorrelogram"
@ -567,7 +547,6 @@ let
"pez"
"phylotools"
"picante"
"PKgraph"
"plotSEMM"
"plsRbeta"
"plsRglm"
@ -578,8 +557,6 @@ let
"prefmod"
"PrevMap"
"ProbForecastGOP"
"qtbase"
"qtpaint"
"r4ss"
"RandomFields"
"rareNMtests"
@ -598,7 +575,6 @@ let
"RcmdrPlugin_KMggplot2"
"RcmdrPlugin_lfstat"
"RcmdrPlugin_MA"
"RcmdrPlugin_mosaic"
"RcmdrPlugin_MPAStats"
"RcmdrPlugin_orloca"
"RcmdrPlugin_plotByGroup"
@ -616,16 +592,12 @@ let
"RcmdrPlugin_UCA"
"recluster"
"relimp"
"RenextGUI"
"reshapeGUI"
"rgl"
"RHRV"
"rich"
"RNCEP"
"RQDA"
"RSDA"
"RSurvey"
"RunuranGUI"
"simba"
"Simile"
"SimpleTable"
@ -662,13 +634,13 @@ let
"vegan"
"vegan3d"
"vegclust"
"WMCapacity"
"x12GUI"
];
packagesToSkipCheck = [
"Rmpi" # tries to run MPI processes
"pbdMPI" # tries to run MPI processes
"data_table" # fails to rename shared library before check
];
# Packages which cannot be installed due to lack of dependencies or other reasons.
@ -723,8 +695,9 @@ let
});
data_table = old.data_table.overrideDerivation (attrs: {
NIX_CFLAGS_COMPILE = attrs.NIX_CFLAGS_COMPILE
+ lib.optionalString stdenv.isDarwin " -fopenmp";
NIX_CFLAGS_COMPILE = attrs.NIX_CFLAGS_COMPILE + " -fopenmp";
patchPhase = "patchShebangs configure";
postInstall = "mv $out/library/data.table/libs/{data.table,datatable}.so";
});
ModelMetrics = old.ModelMetrics.overrideDerivation (attrs: {
@ -772,10 +745,6 @@ let
'';
});
qtbase = old.qtbase.overrideDerivation (attrs: {
patches = [ ./patches/qtbase.patch ];
});
Rmpi = old.Rmpi.overrideDerivation (attrs: {
configureFlags = [
"--with-Rmpi-type=OPENMPI"

2
third_party/nixpkgs/pkgs/development/r-modules/generate-r-packages.R vendored
View file

@ -3,7 +3,7 @@ library(data.table)
library(parallel)
cl <- makeCluster(10)
biocVersion <- 3.8
biocVersion <- 3.11
snapshotDate <- Sys.Date()-1
mirrorUrls <- list( bioc=paste0("http://bioconductor.statistik.tu-dortmund.de/packages/", biocVersion, "/bioc/src/contrib/")

23
third_party/nixpkgs/pkgs/development/tools/aws-sam-cli/default.nix vendored
View file

@ -7,14 +7,6 @@
let
py = python.override {
packageOverrides = self: super: {
aws-sam-translator = super.aws-sam-translator.overridePythonAttrs (oldAttrs: rec {
version = "1.25.0";
src = oldAttrs.src.override {
inherit version;
sha256 = "08756yl5lpqgrpr80f2b6bdcgygr37l6q1yygklcg9hz4yfpccav";
};
});
flask = super.flask.overridePythonAttrs (oldAttrs: rec {
version = "1.0.2";
src = oldAttrs.src.override {
@ -39,11 +31,11 @@ with py.pkgs;
buildPythonApplication rec {
pname = "aws-sam-cli";
version = "1.0.0rc1";
version = "1.6.2";
src = fetchPypi {
inherit pname version;
sha256 = "011b334gdvd9lhqia8c952q3cmzj99vik680180nbp0qh2xw6zpf";
sha256 = "0scnymhhiiqrs2j0jaypxgq2wg1qf1w8f55qfay0b3nf51y6mh8y";
};
# Tests are not included in the PyPI package
@ -75,12 +67,13 @@ buildPythonApplication rec {
# fix over-restrictive version bounds
postPatch = ''
substituteInPlace requirements/base.txt \
--replace "boto3~=1.13.0, >=1.13.0" "boto3~=1.14.3" \
--replace "serverlessrepo==0.1.9" "serverlessrepo~=0.1.9" \
--replace "python-dateutil~=2.6, <2.8.1" "python-dateutil~=2.6" \
--replace "boto3~=1.14.0, >=1.14.23" "boto3~=1.14" \
--replace "docker~=4.2.0" "docker~=4.3.1" \
--replace "jmespath~=0.9.5" "jmespath~=0.10.0" \
--replace "tomlkit==0.5.8" "tomlkit~=0.7.0" \
--replace "requests==2.23.0" "requests~=2.24"
--replace "python-dateutil~=2.6, <2.8.1" "python-dateutil~=2.6" \
--replace "requests==2.23.0" "requests~=2.24" \
--replace "serverlessrepo==0.1.9" "serverlessrepo~=0.1.9" \
--replace "tomlkit==0.5.8" "tomlkit~=0.7.0"
'';
meta = with lib; {

4
third_party/nixpkgs/pkgs/development/tools/go-protobuf/default.nix vendored
View file

@ -2,13 +2,13 @@
buildGoModule rec {
pname = "go-protobuf";
version = "1.4.2";
version = "1.4.3";
src = fetchFromGitHub {
owner = "golang";
repo = "protobuf";
rev = "v${version}";
sha256 = "0m5z81im4nsyfgarjhppayk4hqnrwswr3nix9mj8pff8x9jvcjqw";
sha256 = "1kf1d7xmyjvy0z6j5czp6nqyvj9zrk6liv6znif08927xqfrzyln";
};
vendorSha256 = "04w9vhkrwb2zfqk73xmhignjyvjqmz1j93slkqp7v8jj2dhyla54";

6
third_party/nixpkgs/pkgs/development/tools/rust/bindgen/default.nix vendored
View file

@ -3,7 +3,7 @@
rustPlatform.buildRustPackage rec {
pname = "rust-bindgen";
version = "0.54.1";
version = "0.55.1";
RUSTFLAGS = "--cap-lints warn"; # probably OK to remove after update
@ -11,10 +11,10 @@ rustPlatform.buildRustPackage rec {
owner = "rust-lang";
repo = pname;
rev = "v${version}";
sha256 = "116np72w6agsi94xa1bdn6h7sa9gd522h358zlixk9xrhrx7yfn3";
sha256 = "0cbc78zrhda4adza88g05sy04chixqay2ylgdjgmf13h607hp3kn";
};
cargoSha256 = "12a7bd2579jcnkss073v5w5w68fxwvhq6c6ndjy8vp78wg83qich";
cargoSha256 = "1dv1ywdy701bnc2jv5jq0hnpal1snlizaj9w6k1wxyrp9szjd48w";
libclang = llvmPackages.libclang.lib; #for substituteAll

29
third_party/nixpkgs/pkgs/games/quakespasm/vulkan.nix vendored
View file

@ -1,4 +1,4 @@
{ stdenv, SDL2, fetchFromGitHub, makeWrapper, gzip, libvorbis, libmad, vulkan-headers, vulkan-loader }:
{ stdenv, fetchpatch, fetchFromGitHub, makeWrapper, SDL2, gzip, libvorbis, libmad, vulkan-headers, vulkan-loader }:
stdenv.mkDerivation rec {
pname = "vkquake";
@ -11,14 +11,28 @@ stdenv.mkDerivation rec {
sha256 = "1ry861pk3z02hy7i0yi3xwmd1zma802qzcnlm09w6pslayd9rwbf";
};
# patches and patchFlags can be deleted with the next release
patches = [
(fetchpatch {
url = "https://github.com/Novum/vkQuake/commit/a869a22d9b51c68e57646fa20e4c40fc6db36760.patch";
sha256 = "sha256-ea5lcXTTlJZnuOdF1W+GCYvVgj/gW10tDNyTgfl3Kfs=";
})
];
patchFlags = "-p2";
sourceRoot = "source/Quake";
nativeBuildInputs = [
makeWrapper vulkan-headers
makeWrapper
vulkan-headers
];
buildInputs = [
gzip SDL2 libvorbis libmad vulkan-loader
gzip
SDL2
libvorbis
libmad
vulkan-loader
];
buildFlags = [ "DO_USERDIRS=1" ];
@ -30,12 +44,13 @@ stdenv.mkDerivation rec {
makeFlags = [ "prefix=$(out) bindir=$(out)/bin" ];
postFixup = ''
wrapProgram $out/bin/vkquake --prefix LD_LIBRARY_PATH : ${vulkan-loader}/lib
wrapProgram $out/bin/vkquake \
--prefix LD_LIBRARY_PATH : ${vulkan-loader}/lib
'';
enableParallelBuilding = true;
meta = {
meta = with stdenv.lib; {
description = "Vulkan Quake port based on QuakeSpasm";
homepage = src.meta.homepage;
longDescription = ''
@ -47,7 +62,7 @@ stdenv.mkDerivation rec {
specialization constants, CPU/GPU parallelism and memory pooling.
'';
platforms = stdenv.lib.platforms.linux;
maintainers = [ stdenv.lib.maintainers.gnidorah ];
platforms = platforms.linux;
maintainers = with maintainers; [ gnidorah ];
};
}

6
third_party/nixpkgs/pkgs/misc/vim-plugins/vim-utils.nix vendored
View file

@ -183,7 +183,7 @@ let
rtpPath = "share/vim-plugins";
vimrcFile = {
vimrcContent = {
packages ? null,
vam ? null,
pathogen ? null,
@ -338,7 +338,7 @@ let
filetype indent plugin on | syn on
'');
in writeText "vimrc" ''
in ''
" configuration generated by NIX
set nocompatible
@ -351,11 +351,13 @@ let
${customRC}
'';
vimrcFile = settings: writeText "vimrc" (vimrcContent settings);
in
rec {
inherit vimrcFile;
inherit vimrcContent;
# shell script with custom name passing [-u vimrc] [-U gvimrc] to vim
vimWithRC = {

56
third_party/nixpkgs/pkgs/os-specific/linux/raspberrypi-eeprom/default.nix vendored Normal file
View file

@ -0,0 +1,56 @@
{ stdenvNoCC, lib, fetchFromGitHub, makeWrapper
, python3, binutils-unwrapped, findutils, kmod, pciutils, raspberrypi-tools
}:
stdenvNoCC.mkDerivation {
pname = "raspberrypi-eeprom";
version = "unstable-2020-10-05";
src = fetchFromGitHub {
owner = "raspberrypi";
repo = "rpi-eeprom";
rev = "718820bcebd21d4a619fa262d9b9cf3acbf110f8";
sha256 = "1277jsiyv34dqpandva8kxy1s0y5ql344pl9gk84avzp1mqjnv4g";
};
buildInputs = [ python3 ];
nativeBuildInputs = [ makeWrapper ];
postPatch = ''
# Don't try to verify md5 signatures from /var/lib/dpkg and
# fix path to the configuration.
substituteInPlace rpi-eeprom-update \
--replace 'IGNORE_DPKG_CHECKSUMS=$LOCAL_MODE' 'IGNORE_DPKG_CHECKSUMS=1' \
--replace '/etc/default' '/etc'
'';
installPhase = ''
mkdir -p $out/bin $out/share/rpi-eeprom
cp rpi-eeprom-config rpi-eeprom-update $out/bin
cp -r firmware/{beta,critical,old,stable} $out/share/rpi-eeprom
cp -r firmware/vl805 $out/bin
'';
fixupPhase = ''
patchShebangs $out/bin
wrapProgram $out/bin/rpi-eeprom-update \
--set FIRMWARE_ROOT $out/share/rpi-eeprom \
${lib.optionalString stdenvNoCC.isAarch64 "--set VCMAILBOX ${raspberrypi-tools}/bin/vcmailbox"} \
--prefix PATH : "${lib.makeBinPath ([
binutils-unwrapped
findutils
kmod
pciutils
(placeholder "out")
] ++ lib.optionals stdenvNoCC.isAarch64 [
raspberrypi-tools
])}"
'';
meta = with lib; {
description = "Installation scripts and binaries for the closed sourced Raspberry Pi 4 EEPROMs";
homepage = "https://www.raspberrypi.org/documentation/hardware/raspberrypi/booteeprom.md";
license = with licenses; [ bsd3 unfreeRedistributableFirmware ];
maintainers = with maintainers; [ das_j ];
};
}

4
third_party/nixpkgs/pkgs/servers/mpd/default.nix vendored
View file

@ -116,13 +116,13 @@ let
in stdenv.mkDerivation rec {
pname = "mpd";
version = "0.22";
version = "0.22.1";
src = fetchFromGitHub {
owner = "MusicPlayerDaemon";
repo = "MPD";
rev = "v${version}";
sha256 = "1lsi4fgrarabkahfhf5zbmppg7jba7m362gxyqhv54hmqprl1qff";
sha256 = "16cdmr5w1ikz4ih1nwxnynfdf8qiz4k8bak1sazkkhyavzl3jrl4";
};
buildInputs = [

4
third_party/nixpkgs/pkgs/tools/admin/lxd/default.nix vendored
View file

@ -18,13 +18,13 @@ let
in
buildGoPackage rec {
pname = "lxd";
version = "4.6";
version = "4.7";
goPackagePath = "github.com/lxc/lxd";
src = fetchurl {
url = "https://github.com/lxc/lxd/releases/download/${pname}-${version}/${pname}-${version}.tar.gz";
sha256 = "011fsyafmpis6j0aq7vwd56m2mcb9v3rn4f246ms5nx6zgmga0ip";
sha256 = "1v95cnbs54gzyhzflwb8x0ykja202nll5p48l2nra7cpdsk4a5q1";
};
postPatch = ''

2
third_party/nixpkgs/pkgs/tools/misc/tlp/default.nix vendored
View file

@ -87,8 +87,8 @@
smartmontools
systemd
utillinux
x86_energy_perf_policy
] ++ lib.optional enableRDW networkmanager
++ lib.optional (lib.any (lib.meta.platformMatch stdenv.hostPlatform) x86_energy_perf_policy.meta.platforms) x86_energy_perf_policy
);
in
''

6
third_party/nixpkgs/pkgs/tools/security/aws-okta/default.nix vendored
View file

@ -2,7 +2,7 @@
buildGoPackage rec {
pname = "aws-okta";
version = "1.0.4";
version = "1.0.5";
goPackagePath = "github.com/segmentio/aws-okta";
@ -10,7 +10,7 @@ buildGoPackage rec {
owner = "segmentio";
repo = "aws-okta";
rev = "v${version}";
sha256 = "0a7xccnv0x0a6sydif0rvkdbw4jy9gjijajip1ac6m70l20dhl1v";
sha256 = "1xd73j6rbbdrnzj0m8dqwcvn62cz6bygdpxsx8g7117qbdzz2lj1";
};
buildFlags = [ "--tags" "release" ];
@ -24,7 +24,7 @@ buildGoPackage rec {
inherit version;
description = "aws-vault like tool for Okta authentication";
license = licenses.mit;
maintainers = [maintainers.imalsogreg];
maintainers = with maintainers; [imalsogreg Chili-Man];
homepage = "https://github.com/segmentio/aws-okta";
downloadPage = "https://github.com/segmentio/aws-okta";
};

15
third_party/nixpkgs/pkgs/tools/security/opensc/default.nix vendored
View file

@ -16,6 +16,21 @@ stdenv.mkDerivation rec {
sha256 = "0mg8qmhww3li1isfgvn5hang1hq58zra057ilvgci88csfziv5lv";
};
patches = [
(fetchpatch {
# https://nvd.nist.gov/vuln/detail/CVE-2020-26570
name = "CVE-2020-26570.patch";
url = "https://github.com/OpenSC/OpenSC/commit/6903aebfddc466d966c7b865fae34572bf3ed23e.patch";
sha256 = "sha256-aB9iCVcdp9zFhZiSv5A399Ttj7NUHRVgXr0EfmMwKN4=";
})
(fetchpatch {
# https://nvd.nist.gov/vuln/detail/CVE-2020-26572
name = "CVE-2020-26572.patch";
url = "https://github.com/OpenSC/OpenSC/commit/9d294de90d1cc66956389856e60b6944b27b4817.patch";
sha256 = "sha256-gKJaR5K+NaXh4NeTkGpzHzHCdpt6n54Hnt1GAq0tA9o=";
})
];
nativeBuildInputs = [ pkgconfig autoreconfHook ];
buildInputs = [
zlib readline openssl libassuan

2
third_party/nixpkgs/pkgs/top-level/aliases.nix vendored
View file

@ -666,7 +666,7 @@ mapAliases ({
xpraGtk3 = xpra; # added 2018-09-13
xv = xxv; # added 2020-02-22
youtubeDL = youtube-dl; # added 2014-10-26
ytop = throw "Abandoned by upstream. Consider switching to bottom instead";
ytop = throw "ytop has been abandoned by upstream. Consider switching to bottom instead";
zdfmediathk = mediathekview; # added 2019-01-19
gnome_user_docs = gnome-user-docs; # added 2019-11-20
# spidermonkey is not ABI upwards-ompatible, so only allow this for nix-shell

4
third_party/nixpkgs/pkgs/top-level/all-packages.nix vendored
View file

@ -7373,7 +7373,7 @@ in
inherit (darwin.apple_sdk.frameworks) CoreFoundation Cocoa;
tex = texlive.combined.scheme-small;
extraFonts = true;
} else callPackage ../applications/editors/texmacs {
} else libsForQt5.callPackage ../applications/editors/texmacs {
tex = texlive.combined.scheme-small;
extraFonts = true;
};
@ -18529,6 +18529,8 @@ in
raspberrypifw = callPackage ../os-specific/linux/firmware/raspberrypi {};
raspberrypiWirelessFirmware = callPackage ../os-specific/linux/firmware/raspberrypi-wireless { };
raspberrypi-eeprom = callPackage ../os-specific/linux/raspberrypi-eeprom {};
raspberrypi-tools = callPackage ../os-specific/linux/firmware/raspberrypi/tools.nix {};
regionset = callPackage ../os-specific/linux/regionset { };

20
third_party/nixpkgs/pkgs/top-level/ocaml-packages.nix vendored
View file

@ -1048,26 +1048,11 @@ let
buildOcamlJane = callPackage ../development/ocaml-modules/janestreet/buildOcamlJane.nix {};
ppx_core =
if lib.versionOlder "4.03" ocaml.version
then janeStreet.ppx_core
else callPackage ../development/ocaml-modules/janestreet/ppx-core.nix {};
ppx_optcomp =
if lib.versionOlder "4.03" ocaml.version
then janeStreet.ppx_optcomp
else callPackage ../development/ocaml-modules/janestreet/ppx-optcomp.nix {};
ppx_driver =
if lib.versionOlder "4.03" ocaml.version
then janeStreet.ppx_driver
else callPackage ../development/ocaml-modules/janestreet/ppx-driver.nix {};
ppx_type_conv =
if lib.versionOlder "4.03" ocaml.version
then janeStreet.ppx_type_conv
else callPackage ../development/ocaml-modules/janestreet/ppx-type-conv.nix {};
ppx_compare =
if lib.versionOlder "4.03" ocaml.version
then janeStreet.ppx_compare
@ -1113,11 +1098,6 @@ let
then janeStreet.ppx_enumerate
else callPackage ../development/ocaml-modules/janestreet/ppx-enumerate.nix {};
ppx_fail =
if lib.versionOlder "4.03" ocaml.version
then janeStreet.ppx_fail
else callPackage ../development/ocaml-modules/janestreet/ppx-fail.nix {};
ppx_fields_conv =
if lib.versionOlder "4.03" ocaml.version
then janeStreet.ppx_fields_conv

6
third_party/nixpkgs/pkgs/top-level/perl-packages.nix vendored
View file

@ -8288,10 +8288,10 @@ let
Future = buildPerlModule {
pname = "Future";
version = "0.45";
version = "0.46";
src = fetchurl {
url = "mirror://cpan/authors/id/P/PE/PEVANS/Future-0.45.tar.gz";
sha256 = "1h5609wd1m774h8brgm5vinz6pfmdszp2ms6ybxlyhs0p5msp36f";
url = "mirror://cpan/authors/id/P/PE/PEVANS/Future-0.46.tar.gz";
sha256 = "0zx4cabzz5zyzvyvc7mvl0cc7zkslp0jnxsv41yii76dal8blcbq";
};
buildInputs = [ TestFatal TestIdentity TestRefcount ];
meta = {