{ stdenv , fetchFromGitHub , fetchpatch , runtimeShell }: # This file is responsible for fetching the sage source and adding necessary patches. # It does not actually build anything, it just copies the patched sources to $out. # This is done because multiple derivations rely on these sources and they should # all get the same sources with the same patches applied. let # Fetch a diff between `base` and `rev` on sage's git server. # Used to fetch trac tickets by setting the `base` to the last release and the # `rev` to the last commit of the ticket. fetchSageDiff = { base, name, rev, sha256, ...}@args: ( fetchpatch ({ inherit name sha256; url = "https://git.sagemath.org/sage.git/patch?id2=${base}&id=${rev}"; # We don't care about sage's own build system (which builds all its dependencies). # Exclude build system changes to avoid conflicts. excludes = [ "build/*" ]; } // builtins.removeAttrs args [ "rev" "base" "sha256" ]) ); in stdenv.mkDerivation rec { version = "9.3.rc4"; pname = "sage-src"; src = fetchFromGitHub { owner = "sagemath"; repo = "sage"; rev = version; sha256 = "sha256-LDY07By2j6JagkgT9zeDJ93+m2/oXXEnDRTDzmR8ftk="; }; # Patches needed because of particularities of nix or the way this is packaged. # The goal is to upstream all of them and get rid of this list. nixPatches = [ # Make sure py2/py3 tests are only run when their expected context (all "sage" # tests) are also run. That is necessary to test dochtml individually. See # https://trac.sagemath.org/ticket/26110 for an upstream discussion. # TODO: Determine if it is still necessary. ./patches/Only-test-py2-py3-optional-tests-when-all-of-sage-is.patch # Fixes a potential race condition which can lead to transient doctest failures. ./patches/fix-ecl-race.patch # Not necessary since library location is set explicitly # https://trac.sagemath.org/ticket/27660#ticket ./patches/do-not-test-find-library.patch # Parallelize docubuild using subprocesses, fixing an isolation issue. See # https://groups.google.com/forum/#!topic/sage-packaging/YGOm8tkADrE ./patches/sphinx-docbuild-subprocesses.patch ]; # Since sage unfortunately does not release bugfix releases, packagers must # fix those bugs themselves. This is for critical bugfixes, where "critical" # == "causes (transient) doctest failures / somebody complained". bugfixPatches = [ # To help debug the transient error in # https://trac.sagemath.org/ticket/23087 when it next occurs. ./patches/configurationpy-error-verbose.patch ]; # Patches needed because of package updates. We could just pin the versions of # dependencies, but that would lead to rebuilds, confusion and the burdons of # maintaining multiple versions of dependencies. Instead we try to make sage # compatible with never dependency versions when possible. All these changes # should come from or be proposed to upstream. This list will probably never # be empty since dependencies update all the time. packageUpgradePatches = [ # After updating smypow to (https://trac.sagemath.org/ticket/3360) we can # now set the cache dir to be withing the .sage directory. This is not # strictly necessary, but keeps us from littering in the user's HOME. ./patches/sympow-cache.patch # ignore a deprecation warning for usage of `cmp` in the attrs library in the doctests ./patches/ignore-cmp-deprecation.patch ]; patches = nixPatches ++ bugfixPatches ++ packageUpgradePatches; postPatch = '' # Make sure sage can at least be imported without setting any environment # variables. It won't be close to feature complete though. sed -i \ "s|var(\"SAGE_ROOT\".*|var(\"SAGE_ROOT\", \"$out\")|" \ src/sage/env.py # src/doc/en/reference/spkg/conf.py expects index.rst in its directory, # a list of external packages in the sage distribution (build/pkgs) # generated by the bootstrap script (which we don't run). this is not # relevant for other distributions, so remove it. rm src/doc/en/reference/spkg/conf.py sed -i "/spkg/d" src/doc/en/reference/index.rst # the bootstrap script also generates installation instructions for # arch, debian, fedora, cygwin and homebrew using data from build/pkgs. # we don't run the bootstrap script, so disable including the generated # files. docbuilding fails otherwise. sed -i "/literalinclude/d" src/doc/en/installation/source.rst ''; buildPhase = "# do nothing"; installPhase = '' cp -r . "$out" ''; }