{ lib , ase , buildPythonPackage , cython , datamodeldict , fetchFromGitHub , matplotlib , numericalunits , numpy , pandas , phonopy , potentials , pymatgen , pytest , pytestCheckHook , pythonOlder , pythonAtLeast , requests , scipy , setuptools , toolz , xmltodict , pythonRelaxDepsHook }: buildPythonPackage rec { version = "1.4.6"; pname = "atomman"; format = "pyproject"; disabled = pythonOlder "3.7"; src = fetchFromGitHub { owner = "usnistgov"; repo = "atomman"; rev = "v${version}"; hash = "sha256-tcsxtFbBdMC6+ixzqhnR+5UNwcQmnPQSvuyNA2IYelI="; }; nativeBuildInputs = [ setuptools pythonRelaxDepsHook ]; propagatedBuildInputs = [ cython datamodeldict matplotlib numericalunits numpy pandas potentials requests scipy toolz xmltodict ]; pythonRelaxDeps = [ "potentials" ]; preCheck = '' # By default, pytestCheckHook imports atomman from the current directory # instead of from where `pip` installs it and fails due to missing Cython # modules. Fix this by removing atomman from the current directory. # rm -r atomman ''; nativeCheckInputs = [ ase phonopy pymatgen pytest pytestCheckHook ]; disabledTests = [ "test_unique_shifts_prototype" # needs network access to download database files ]; pythonImportsCheck = [ "atomman" ]; meta = with lib; { description = "Atomistic Manipulation Toolkit"; homepage = "https://github.com/usnistgov/atomman/"; license = licenses.mit; maintainers = with maintainers; [ ]; }; }