{ lib, buildPythonPackage, pythonOlder, fetchFromGitHub, pytestCheckHook, future, numpy, pillow, scipy, scikit-learn, scikit-image, threadpoolctl, }: buildPythonPackage rec { pname = "batchgenerators"; version = "0.25"; format = "setuptools"; disabled = pythonOlder "3.7"; src = fetchFromGitHub { owner = "MIC-DKFZ"; repo = pname; rev = "v${version}"; hash = "sha256-L2mWH2t8PN9o1M67KDdl1Tj2ZZ02MY4icsJY2VNrj3A="; }; propagatedBuildInputs = [ future numpy pillow scipy scikit-learn scikit-image threadpoolctl ]; # see https://github.com/MIC-DKFZ/batchgenerators/pull/78 postPatch = '' substituteInPlace setup.py \ --replace '"unittest2",' "" ''; nativeCheckInputs = [ pytestCheckHook ]; # see https://github.com/MIC-DKFZ/batchgenerators/pull/78 disabledTestPaths = [ "tests/test_axis_mirroring.py" ]; pythonImportsCheck = [ "batchgenerators" "batchgenerators.augmentations" "batchgenerators.dataloading" "batchgenerators.datasets" "batchgenerators.transforms" "batchgenerators.utilities" ]; meta = with lib; { description = "2D and 3D image data augmentation for deep learning"; homepage = "https://github.com/MIC-DKFZ/batchgenerators"; license = licenses.asl20; maintainers = with maintainers; [ bcdarwin ]; }; }