{ stdenv , lib , buildPythonPackage , fetchPypi # build-system , cython , gfortran , numpy , oldest-supported-numpy , scipy , setuptools # native dependencies , glibcLocales , llvmPackages , pytestCheckHook , pytest-xdist , pillow , joblib , threadpoolctl , pythonOlder }: buildPythonPackage rec { pname = "scikit-learn"; version = "1.3.2"; pyproject = true; disabled = pythonOlder "3.6"; src = fetchPypi { inherit pname version; hash = "sha256-ovVMdqzMFaNL+5Bm5selbB5yNd2ldiuZB5IzC1LM+wU="; }; buildInputs = [ pillow glibcLocales ] ++ lib.optionals stdenv.cc.isClang [ llvmPackages.openmp ]; nativeBuildInputs = [ cython gfortran numpy oldest-supported-numpy scipy setuptools ]; propagatedBuildInputs = [ joblib numpy numpy.blas scipy threadpoolctl ]; nativeCheckInputs = [ pytestCheckHook pytest-xdist ]; env.LC_ALL="en_US.UTF-8"; preBuild = '' export SKLEARN_BUILD_PARALLEL=$NIX_BUILD_CORES ''; doCheck = !stdenv.isAarch64; disabledTests = [ # Skip test_feature_importance_regression - does web fetch "test_feature_importance_regression" # failing on macos "check_regressors_train" "check_classifiers_train" "xfail_ignored_in_check_estimator" ] ++ lib.optionals (stdenv.isDarwin) [ "test_graphical_lasso" ]; pytestFlagsArray = [ # verbose build outputs needed to debug hard-to-reproduce hydra failures "-v" "--pyargs" "sklearn" # NuSVC memmap tests causes segmentation faults in certain environments # (e.g. Hydra Darwin machines) related to a long-standing joblib issue # (https://github.com/joblib/joblib/issues/563). See also: # https://github.com/scikit-learn/scikit-learn/issues/17582 # Since we are overriding '-k' we need to include the 'disabledTests' from above manually. "-k" "'not (NuSVC and memmap) ${toString (lib.forEach disabledTests (t: "and not ${t}"))}'" ]; preCheck = '' cd $TMPDIR export HOME=$TMPDIR export OMP_NUM_THREADS=1 ''; pythonImportsCheck = [ "sklearn" ]; meta = with lib; { description = "A set of python modules for machine learning and data mining"; changelog = let major = versions.major version; minor = versions.minor version; dashVer = replaceStrings ["."] ["-"] version; in "https://scikit-learn.org/stable/whats_new/v${major}.${minor}.html#version-${dashVer}"; homepage = "https://scikit-learn.org"; license = licenses.bsd3; maintainers = with maintainers; [ davhau ]; }; }