{ lib, buildPythonPackage, fetchPypi, glibcLocales, importlib-metadata, numpy, pytestCheckHook, pythonOlder, setuptools, setuptools-scm, }: buildPythonPackage rec { pname = "pyfaidx"; version = "0.8.1.2"; pyproject = true; disabled = pythonOlder "3.7"; src = fetchPypi { inherit pname version; hash = "sha256-2EUkcEVbHnePk5aUR9uOok3rRiTHxAdpUWRZy2+HvDM="; }; build-system = [ setuptools setuptools-scm ]; dependencies = [ importlib-metadata ]; nativeCheckInputs = [ glibcLocales numpy pytestCheckHook ]; disabledTestPaths = [ # FileNotFoundError: [Errno 2] No such file or directory: 'data/genes.fasta.gz' "tests/test_Fasta_bgzip.py" ]; pythonImportsCheck = [ "pyfaidx" ]; meta = with lib; { description = "Python classes for indexing, retrieval, and in-place modification of FASTA files using a samtools compatible index"; homepage = "https://github.com/mdshw5/pyfaidx"; changelog = "https://github.com/mdshw5/pyfaidx/releases/tag/v${version}"; license = licenses.bsd3; maintainers = with maintainers; [ jbedo ]; mainProgram = "faidx"; }; }