{ lib, stdenv, pythonOlder, buildPythonPackage, fetchFromGitHub, setuptools-scm, gmt, numpy, netcdf4, pandas, packaging, xarray, pytest-mpl, ipython, ghostscript, pytestCheckHook, }: buildPythonPackage rec { pname = "pygmt"; version = "0.11.0"; pyproject = true; disabled = pythonOlder "3.9"; src = fetchFromGitHub { owner = "GenericMappingTools"; repo = "pygmt"; rev = "refs/tags/v${version}"; hash = "sha256-DbewB/lP44bpNSQ4ht7n0coS2Ml7qmEU4CP91p5YtZg="; }; postPatch = '' substituteInPlace pygmt/clib/loading.py \ --replace "env.get(\"GMT_LIBRARY_PATH\", \"\")" "env.get(\"GMT_LIBRARY_PATH\", \"${gmt}/lib\")" ''; nativeBuildInputs = [ setuptools-scm ]; propagatedBuildInputs = [ numpy netcdf4 pandas packaging xarray ]; nativeCheckInputs = [ pytestCheckHook pytest-mpl ghostscript ipython ]; # The *entire* test suite requires network access doCheck = false; postBuild = '' export HOME=$TMP ''; pythonImportsCheck = [ "pygmt" ]; meta = with lib; { description = "Python interface for the Generic Mapping Tools"; homepage = "https://github.com/GenericMappingTools/pygmt"; license = licenses.bsd3; changelog = "https://github.com/GenericMappingTools/pygmt/releases/tag/v${version}"; # pygmt.exceptions.GMTCLibNotFoundError: Error loading the GMT shared library '/nix/store/r3xnnqgl89vrnq0kzxx0bmjwzks45mz8-gmt-6.1.1/lib/libgmt.dylib' broken = stdenv.hostPlatform.isDarwin; maintainers = with maintainers; [ sikmir ]; }; }