{ lib, fetchFromGitHub, buildPythonPackage, pythonOlder, numpy, cython, zlib, python-lzo, nose, }: buildPythonPackage rec { pname = "bx-python"; version = "0.11.0"; format = "setuptools"; disabled = pythonOlder "3.8"; src = fetchFromGitHub { owner = "bxlab"; repo = "bx-python"; rev = "refs/tags/v${version}"; hash = "sha256-evhxh/cCZFSK6EgMu7fC9/ZrPd2S1fZz89ItGYrHQck="; }; nativeBuildInputs = [ cython ]; buildInputs = [ zlib ]; propagatedBuildInputs = [ numpy python-lzo ]; nativeCheckInputs = [ nose ]; postInstall = '' cp -r scripts/* $out/bin # This is a small hack; the test suite uses the scripts which need to # be patched. Linking the patched scripts in $out back to the # working directory allows the tests to run rm -rf scripts ln -s $out/bin scripts ''; meta = with lib; { description = "Tools for manipulating biological data, particularly multiple sequence alignments"; homepage = "https://github.com/bxlab/bx-python"; changelog = "https://github.com/bxlab/bx-python/releases/tag/v${version}"; license = licenses.mit; maintainers = with maintainers; [ jbedo ]; platforms = [ "x86_64-linux" ]; }; }