70 lines
1.4 KiB
Nix
70 lines
1.4 KiB
Nix
{
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lib,
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buildPythonPackage,
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fetchPypi,
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pythonOlder,
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pytestCheckHook,
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matplotlib,
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nibabel,
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numpy,
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pydicom,
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pymedio,
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scikit-fuzzy,
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scikit-image,
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scikit-learn,
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scipy,
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simpleitk,
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statsmodels,
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}:
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buildPythonPackage rec {
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pname = "intensity-normalization";
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version = "2.2.4";
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format = "setuptools";
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disabled = pythonOlder "3.6";
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src = fetchPypi {
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pname = "intensity_normalization";
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inherit version;
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hash = "sha256-s/trDIRoqLFj3NO+iv3E+AEB4grBAHDlEL6+TCdsgmg=";
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};
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postPatch = ''
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substituteInPlace setup.cfg --replace "!=3.10.*," "" --replace "!=3.11.*" ""
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substituteInPlace setup.cfg --replace "pytest-runner" ""
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'';
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pythonRelaxDeps = [ "nibabel" ];
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propagatedBuildInputs = [
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matplotlib
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nibabel
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numpy
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pydicom
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pymedio
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scikit-fuzzy
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scikit-image
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scikit-learn
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scipy
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simpleitk
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statsmodels
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];
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nativeCheckInputs = [ pytestCheckHook ];
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pytestFlagsArray = [ "tests" ];
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pythonImportsCheck = [
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"intensity_normalization"
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"intensity_normalization.normalize"
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"intensity_normalization.plot"
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"intensity_normalization.util"
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];
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meta = with lib; {
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homepage = "https://github.com/jcreinhold/intensity-normalization";
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description = "MRI intensity normalization tools";
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maintainers = with maintainers; [ bcdarwin ];
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license = licenses.asl20;
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};
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}
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