31 lines
914 B
Nix
31 lines
914 B
Nix
{ stdenv, buildDunePackage, fetchFromGitHub, ppx_deriving
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, alcotest, angstrom-unix, biocaml, gnuplot, gsl, lacaml, menhir, owl, printbox }:
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buildDunePackage rec {
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pname = "phylogenetics";
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version = "unstable-2020-11-23";
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useDune2 = true;
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src = fetchFromGitHub {
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owner = "biocaml";
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repo = pname;
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rev = "e6e10efa0a3a8fd61bf4ab69e91a09549cc1ded6";
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sha256 = "0pmypzp0rvlpzm8zpbcfkphwnhrpyfwfv44kshvx2f8nslmksh8c";
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};
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minimumOCamlVersion = "4.08"; # e.g., uses Float.min
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checkInputs = [ alcotest ];
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buildInputs = [ menhir ];
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propagatedBuildInputs = [ angstrom-unix biocaml gnuplot gsl lacaml owl ppx_deriving printbox ];
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doCheck = false; # many tests require bppsuite
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meta = with stdenv.lib; {
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inherit (src.meta) homepage;
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description = "Bioinformatics library for Ocaml";
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maintainers = [ maintainers.bcdarwin ];
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license = licenses.cecill-b;
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};
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}
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