39 lines
1,006 B
Nix
39 lines
1,006 B
Nix
{ stdenv, fetchFromGitHub, zlib, blas, lapack, darwin}:
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stdenv.mkDerivation rec {
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pname = "plink-ng";
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version = "1.90b3";
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src = fetchFromGitHub {
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owner = "chrchang";
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repo = "plink-ng";
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rev = "v${version}";
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sha256 = "1zhffjbwpd50dxywccbnv1rxy9njwz73l4awc5j7i28rgj3davcq";
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};
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buildInputs = [ zlib ] ++ (if stdenv.isDarwin then [ darwin.apple_sdk.frameworks.Accelerate ] else [ blas lapack ]) ;
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preBuild = ''
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sed -i 's|zlib-1.2.8/zlib.h|zlib.h|g' *.c *.h
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${if stdenv.cc.isClang then "sed -i 's|g++|clang++|g' Makefile.std" else ""}
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makeFlagsArray+=(
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ZLIB=-lz
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BLASFLAGS="-lblas -lcblas -llapack"
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);
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'';
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makefile = "Makefile.std";
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installPhase = ''
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mkdir -p $out/bin
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cp plink $out/bin
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'';
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meta = {
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description = "A comprehensive update to the PLINK association analysis toolset";
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homepage = "https://www.cog-genomics.org/plink2";
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license = stdenv.lib.licenses.gpl3;
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platforms = stdenv.lib.platforms.linux;
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};
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}
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