56 lines
1.4 KiB
Nix
56 lines
1.4 KiB
Nix
{
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lib,
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stdenv,
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fetchFromGitHub,
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cmake,
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pkg-config,
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bzip2,
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libxml2,
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swig,
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python ? null,
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withPython ? false,
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}:
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stdenv.mkDerivation (attrs: {
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pname = "libsbml";
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version = "5.20.4";
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src = fetchFromGitHub {
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owner = "sbmlteam";
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repo = "libsbml";
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rev = "v${attrs.version}";
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hash = "sha256-qWTN033YU4iWzt+mXQaP5W/6IF5nebF4PwNVkyL8wTg=";
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};
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nativeBuildInputs = [
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cmake
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pkg-config
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swig
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] ++ lib.optional withPython python.pkgs.pythonImportsCheckHook;
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buildInputs = [
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bzip2.dev
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libxml2
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] ++ lib.optional withPython python;
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# libSBML doesn't always make use of pkg-config
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cmakeFlags = [
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"-DLIBXML_INCLUDE_DIR=${lib.getDev libxml2}/include/libxml2"
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"-DLIBXML_LIBRARY=${lib.getLib libxml2}/lib/libxml2${stdenv.hostPlatform.extensions.sharedLibrary}"
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"-DPKG_CONFIG_EXECUTABLE=${lib.getBin pkg-config}/bin/pkg-config"
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"-DSWIG_EXECUTABLE=${lib.getBin swig}/bin/swig"
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] ++ lib.optional withPython "-DWITH_PYTHON=ON";
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postInstall = lib.optional withPython ''
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mv $out/${python.sitePackages}/libsbml/libsbml.py $out/${python.sitePackages}/libsbml/__init__.py
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'';
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pythonImportsCheck = [ "libsbml" ];
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meta = with lib; {
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description = "Library for manipulating Systems Biology Markup Language (SBML)";
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homepage = "https://github.com/sbmlteam/libsbml";
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license = licenses.lgpl21Only;
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maintainers = [ maintainers.kupac ];
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platforms = platforms.all;
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};
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})
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