541 lines
16 KiB
Nix
541 lines
16 KiB
Nix
{ stdenv, bazel_5, buildBazelPackage, isPy3k, lib, fetchFromGitHub, symlinkJoin
|
|
, addOpenGLRunpath, fetchpatch, patchelfUnstable
|
|
# Python deps
|
|
, buildPythonPackage, pythonOlder, python
|
|
# Python libraries
|
|
, numpy, tensorboard, absl-py
|
|
, packaging, setuptools, wheel, keras, keras-preprocessing, google-pasta
|
|
, opt-einsum, astunparse, h5py
|
|
, termcolor, grpcio, six, wrapt, protobuf-python, tensorflow-estimator-bin
|
|
, dill, flatbuffers-python, portpicker, tblib, typing-extensions
|
|
# Common deps
|
|
, git, pybind11, which, binutils, glibcLocales, cython, perl, coreutils
|
|
# Common libraries
|
|
, jemalloc, mpi, gast, grpc, sqlite, boringssl, jsoncpp, nsync
|
|
, curl, snappy, flatbuffers-core, lmdb-core, icu, double-conversion, libpng, libjpeg_turbo, giflib, protobuf-core
|
|
# Upstream by default includes cuda support since tensorflow 1.15. We could do
|
|
# that in nix as well. It would make some things easier and less confusing, but
|
|
# it would also make the default tensorflow package unfree. See
|
|
# https://groups.google.com/a/tensorflow.org/forum/#!topic/developers/iRCt5m4qUz0
|
|
, cudaSupport ? false, cudaPackages ? {}
|
|
, mklSupport ? false, mkl ? null
|
|
, tensorboardSupport ? true
|
|
# XLA without CUDA is broken
|
|
, xlaSupport ? cudaSupport
|
|
, sse42Support ? stdenv.hostPlatform.sse4_2Support
|
|
, avx2Support ? stdenv.hostPlatform.avx2Support
|
|
, fmaSupport ? stdenv.hostPlatform.fmaSupport
|
|
# Darwin deps
|
|
, Foundation, Security, cctools, llvmPackages_11
|
|
}:
|
|
|
|
let
|
|
inherit (cudaPackages) cudatoolkit cudaFlags cudnn nccl;
|
|
in
|
|
|
|
assert cudaSupport -> cudatoolkit != null
|
|
&& cudnn != null;
|
|
|
|
# unsupported combination
|
|
assert ! (stdenv.isDarwin && cudaSupport);
|
|
|
|
assert mklSupport -> mkl != null;
|
|
|
|
let
|
|
withTensorboard = (pythonOlder "3.6") || tensorboardSupport;
|
|
|
|
cudatoolkit_joined = symlinkJoin {
|
|
name = "${cudatoolkit.name}-merged";
|
|
paths = [
|
|
cudatoolkit.lib
|
|
cudatoolkit.out
|
|
] ++ lib.optionals (lib.versionOlder cudatoolkit.version "11") [
|
|
# for some reason some of the required libs are in the targets/x86_64-linux
|
|
# directory; not sure why but this works around it
|
|
"${cudatoolkit}/targets/${stdenv.system}"
|
|
];
|
|
};
|
|
|
|
cudatoolkit_cc_joined = symlinkJoin {
|
|
name = "${cudatoolkit.cc.name}-merged";
|
|
paths = [
|
|
cudatoolkit.cc
|
|
binutils.bintools # for ar, dwp, nm, objcopy, objdump, strip
|
|
];
|
|
};
|
|
|
|
# Needed for _some_ system libraries, grep INCLUDEDIR.
|
|
includes_joined = symlinkJoin {
|
|
name = "tensorflow-deps-merged";
|
|
paths = [
|
|
jsoncpp
|
|
];
|
|
};
|
|
|
|
tfFeature = x: if x then "1" else "0";
|
|
|
|
version = "2.11.0";
|
|
variant = if cudaSupport then "-gpu" else "";
|
|
pname = "tensorflow${variant}";
|
|
|
|
pythonEnv = python.withPackages (_:
|
|
[ # python deps needed during wheel build time (not runtime, see the buildPythonPackage part for that)
|
|
# This list can likely be shortened, but each trial takes multiple hours so won't bother for now.
|
|
absl-py
|
|
astunparse
|
|
dill
|
|
flatbuffers-python
|
|
gast
|
|
google-pasta
|
|
grpcio
|
|
h5py
|
|
keras-preprocessing
|
|
numpy
|
|
opt-einsum
|
|
packaging
|
|
protobuf-python
|
|
setuptools
|
|
six
|
|
tblib
|
|
tensorboard
|
|
tensorflow-estimator-bin
|
|
termcolor
|
|
typing-extensions
|
|
wheel
|
|
wrapt
|
|
]);
|
|
|
|
rules_cc_darwin_patched = stdenv.mkDerivation {
|
|
name = "rules_cc-${pname}-${version}";
|
|
|
|
src = _bazel-build.deps;
|
|
|
|
prePatch = "pushd rules_cc";
|
|
patches = [
|
|
# https://github.com/bazelbuild/rules_cc/issues/122
|
|
(fetchpatch {
|
|
name = "tensorflow-rules_cc-libtool-path.patch";
|
|
url = "https://github.com/bazelbuild/rules_cc/commit/8c427ab30bf213630dc3bce9d2e9a0e29d1787db.diff";
|
|
sha256 = "sha256-C4v6HY5+jm0ACUZ58gBPVejCYCZfuzYKlHZ0m2qDHCk=";
|
|
})
|
|
|
|
# https://github.com/bazelbuild/rules_cc/pull/124
|
|
(fetchpatch {
|
|
name = "tensorflow-rules_cc-install_name_tool-path.patch";
|
|
url = "https://github.com/bazelbuild/rules_cc/commit/156497dc89100db8a3f57b23c63724759d431d05.diff";
|
|
sha256 = "sha256-NES1KeQmMiUJQVoV6dS4YGRxxkZEjOpFSCyOq9HZYO0=";
|
|
})
|
|
];
|
|
postPatch = "popd";
|
|
|
|
dontConfigure = true;
|
|
dontBuild = true;
|
|
|
|
installPhase = ''
|
|
runHook preInstall
|
|
|
|
mv rules_cc/ "$out"
|
|
|
|
runHook postInstall
|
|
'';
|
|
};
|
|
llvm-raw_darwin_patched = stdenv.mkDerivation {
|
|
name = "llvm-raw-${pname}-${version}";
|
|
|
|
src = _bazel-build.deps;
|
|
|
|
prePatch = "pushd llvm-raw";
|
|
patches = [
|
|
# Fix a vendored config.h that requires the 10.13 SDK
|
|
./llvm_bazel_fix_macos_10_12_sdk.patch
|
|
];
|
|
postPatch = ''
|
|
touch {BUILD,WORKSPACE}
|
|
popd
|
|
'';
|
|
|
|
dontConfigure = true;
|
|
dontBuild = true;
|
|
|
|
installPhase = ''
|
|
runHook preInstall
|
|
|
|
mv llvm-raw/ "$out"
|
|
|
|
runHook postInstall
|
|
'';
|
|
};
|
|
bazel-build = if stdenv.isDarwin then _bazel-build.overrideAttrs (prev: {
|
|
bazelFlags = prev.bazelFlags ++ [
|
|
"--override_repository=rules_cc=${rules_cc_darwin_patched}"
|
|
"--override_repository=llvm-raw=${llvm-raw_darwin_patched}"
|
|
];
|
|
preBuild = ''
|
|
export AR="${cctools}/bin/libtool"
|
|
'';
|
|
}) else _bazel-build;
|
|
|
|
_bazel-build = (buildBazelPackage.override (lib.optionalAttrs stdenv.isDarwin {
|
|
# clang 7 fails to emit a symbol for
|
|
# __ZN4llvm11SmallPtrSetIPKNS_10AllocaInstELj8EED1Ev in any of the
|
|
# translation units, so the build fails at link time
|
|
stdenv = llvmPackages_11.stdenv;
|
|
})) {
|
|
name = "${pname}-${version}";
|
|
bazel = bazel_5;
|
|
|
|
src = fetchFromGitHub {
|
|
owner = "tensorflow";
|
|
repo = "tensorflow";
|
|
rev = "refs/tags/v${version}";
|
|
hash = "sha256-OYh61/83yv+ycivylfdS8yFUIUAk8euAPvmfjPzldGs=";
|
|
};
|
|
|
|
# On update, it can be useful to steal the changes from gentoo
|
|
# https://gitweb.gentoo.org/repo/gentoo.git/tree/sci-libs/tensorflow
|
|
|
|
nativeBuildInputs = [
|
|
which pythonEnv cython perl protobuf-core
|
|
] ++ lib.optional cudaSupport addOpenGLRunpath;
|
|
|
|
buildInputs = [
|
|
jemalloc
|
|
mpi
|
|
glibcLocales
|
|
git
|
|
|
|
# libs taken from system through the TF_SYS_LIBS mechanism
|
|
boringssl
|
|
curl
|
|
double-conversion
|
|
flatbuffers-core
|
|
giflib
|
|
grpc
|
|
icu
|
|
jsoncpp
|
|
libjpeg_turbo
|
|
libpng
|
|
lmdb-core
|
|
pybind11
|
|
snappy
|
|
sqlite
|
|
] ++ lib.optionals cudaSupport [
|
|
cudatoolkit
|
|
cudnn
|
|
] ++ lib.optionals mklSupport [
|
|
mkl
|
|
] ++ lib.optionals stdenv.isDarwin [
|
|
Foundation
|
|
Security
|
|
] ++ lib.optionals (!stdenv.isDarwin) [
|
|
nsync
|
|
];
|
|
|
|
# arbitrarily set to the current latest bazel version, overly careful
|
|
TF_IGNORE_MAX_BAZEL_VERSION = true;
|
|
|
|
LIBTOOL = lib.optionalString stdenv.isDarwin "${cctools}/bin/libtool";
|
|
|
|
# Take as many libraries from the system as possible. Keep in sync with
|
|
# list of valid syslibs in
|
|
# https://github.com/tensorflow/tensorflow/blob/master/third_party/systemlibs/syslibs_configure.bzl
|
|
TF_SYSTEM_LIBS = lib.concatStringsSep "," ([
|
|
"absl_py"
|
|
"astor_archive"
|
|
"astunparse_archive"
|
|
"boringssl"
|
|
# Not packaged in nixpkgs
|
|
# "com_github_googleapis_googleapis"
|
|
# "com_github_googlecloudplatform_google_cloud_cpp"
|
|
"com_github_grpc_grpc"
|
|
"com_google_protobuf"
|
|
# Fails with the error: external/org_tensorflow/tensorflow/core/profiler/utils/tf_op_utils.cc:46:49: error: no matching function for call to 're2::RE2::FullMatch(absl::lts_2020_02_25::string_view&, re2::RE2&)'
|
|
# "com_googlesource_code_re2"
|
|
"curl"
|
|
"cython"
|
|
"dill_archive"
|
|
"double_conversion"
|
|
"flatbuffers"
|
|
"functools32_archive"
|
|
"gast_archive"
|
|
"gif"
|
|
"hwloc"
|
|
"icu"
|
|
"jsoncpp_git"
|
|
"libjpeg_turbo"
|
|
"lmdb"
|
|
"nasm"
|
|
"opt_einsum_archive"
|
|
"org_sqlite"
|
|
"pasta"
|
|
"png"
|
|
"pybind11"
|
|
"six_archive"
|
|
"snappy"
|
|
"tblib_archive"
|
|
"termcolor_archive"
|
|
"typing_extensions_archive"
|
|
"wrapt"
|
|
"zlib"
|
|
] ++ lib.optionals (!stdenv.isDarwin) [
|
|
"nsync" # fails to build on darwin
|
|
]);
|
|
|
|
INCLUDEDIR = "${includes_joined}/include";
|
|
|
|
# This is needed for the Nix-provided protobuf dependency to work,
|
|
# as otherwise the rule `link_proto_files` tries to create the links
|
|
# to `/usr/include/...` which results in build failures.
|
|
PROTOBUF_INCLUDE_PATH = "${protobuf-core}/include";
|
|
|
|
PYTHON_BIN_PATH = pythonEnv.interpreter;
|
|
|
|
TF_NEED_GCP = true;
|
|
TF_NEED_HDFS = true;
|
|
TF_ENABLE_XLA = tfFeature xlaSupport;
|
|
|
|
CC_OPT_FLAGS = " ";
|
|
|
|
# https://github.com/tensorflow/tensorflow/issues/14454
|
|
TF_NEED_MPI = tfFeature cudaSupport;
|
|
|
|
TF_NEED_CUDA = tfFeature cudaSupport;
|
|
TF_CUDA_PATHS = lib.optionalString cudaSupport "${cudatoolkit_joined},${cudnn},${nccl}";
|
|
GCC_HOST_COMPILER_PREFIX = lib.optionalString cudaSupport "${cudatoolkit_cc_joined}/bin";
|
|
GCC_HOST_COMPILER_PATH = lib.optionalString cudaSupport "${cudatoolkit_cc_joined}/bin/gcc";
|
|
TF_CUDA_COMPUTE_CAPABILITIES = builtins.concatStringsSep "," cudaFlags.cudaRealArchs;
|
|
|
|
postPatch = ''
|
|
# bazel 3.3 should work just as well as bazel 3.1
|
|
rm -f .bazelversion
|
|
patchShebangs .
|
|
'' + lib.optionalString (stdenv.hostPlatform.system == "x86_64-darwin") ''
|
|
cat ${./com_google_absl_fix_macos.patch} >> third_party/absl/com_google_absl_fix_mac_and_nvcc_build.patch
|
|
'' + lib.optionalString (!withTensorboard) ''
|
|
# Tensorboard pulls in a bunch of dependencies, some of which may
|
|
# include security vulnerabilities. So we make it optional.
|
|
# https://github.com/tensorflow/tensorflow/issues/20280#issuecomment-400230560
|
|
sed -i '/tensorboard ~=/d' tensorflow/tools/pip_package/setup.py
|
|
'';
|
|
|
|
# https://github.com/tensorflow/tensorflow/pull/39470
|
|
NIX_CFLAGS_COMPILE = [ "-Wno-stringop-truncation" ];
|
|
|
|
preConfigure = let
|
|
opt_flags = []
|
|
++ lib.optionals sse42Support ["-msse4.2"]
|
|
++ lib.optionals avx2Support ["-mavx2"]
|
|
++ lib.optionals fmaSupport ["-mfma"];
|
|
in ''
|
|
patchShebangs configure
|
|
|
|
# dummy ldconfig
|
|
mkdir dummy-ldconfig
|
|
echo "#!${stdenv.shell}" > dummy-ldconfig/ldconfig
|
|
chmod +x dummy-ldconfig/ldconfig
|
|
export PATH="$PWD/dummy-ldconfig:$PATH"
|
|
|
|
export PYTHON_LIB_PATH="$NIX_BUILD_TOP/site-packages"
|
|
export CC_OPT_FLAGS="${lib.concatStringsSep " " opt_flags}"
|
|
mkdir -p "$PYTHON_LIB_PATH"
|
|
|
|
# To avoid mixing Python 2 and Python 3
|
|
unset PYTHONPATH
|
|
'';
|
|
|
|
configurePhase = ''
|
|
runHook preConfigure
|
|
./configure
|
|
runHook postConfigure
|
|
'';
|
|
|
|
hardeningDisable = [ "format" ];
|
|
|
|
bazelBuildFlags = [
|
|
"--config=opt" # optimize using the flags set in the configure phase
|
|
]
|
|
++ lib.optionals stdenv.cc.isClang [
|
|
"--cxxopt=-x" "--cxxopt=c++"
|
|
"--host_cxxopt=-x" "--host_cxxopt=c++"
|
|
|
|
# workaround for https://github.com/bazelbuild/bazel/issues/15359
|
|
"--spawn_strategy=sandboxed"
|
|
]
|
|
++ lib.optionals (mklSupport) [ "--config=mkl" ];
|
|
|
|
bazelTarget = "//tensorflow/tools/pip_package:build_pip_package //tensorflow/tools/lib_package:libtensorflow";
|
|
|
|
removeRulesCC = false;
|
|
# Without this Bazel complaints about sandbox violations.
|
|
dontAddBazelOpts = true;
|
|
|
|
fetchAttrs = {
|
|
sha256 = {
|
|
x86_64-linux = if cudaSupport
|
|
then "sha256-/wB9EpaDPg3TrD9qggdA4vPgzvmaKc6dDnLjoYTJC5o="
|
|
else "sha256-QgOaUaq0V5HG9BOv9nEw8OTSlzINNFvbnyP8Vx+r9Xw=";
|
|
aarch64-linux = "sha256-zjnRtTG1j9cZTbP0Xnk2o/zWTNsP8T0n4Ai8IiAT3PE=";
|
|
x86_64-darwin = "sha256-RBLox9rzBKcZMm4NwnT7vQ/EjapWQJkqxuQ0LIdaM1E=";
|
|
aarch64-darwin = "sha256-BRzh79lYvMHsUMk8BEYDLHTpnmeZ9+0lrDtj4XI1YY4=";
|
|
}.${stdenv.hostPlatform.system} or (throw "unsupported system ${stdenv.hostPlatform.system}");
|
|
};
|
|
|
|
buildAttrs = {
|
|
outputs = [ "out" "python" ];
|
|
|
|
preBuild = ''
|
|
patchShebangs .
|
|
'';
|
|
|
|
installPhase = ''
|
|
mkdir -p "$out"
|
|
tar -xf bazel-bin/tensorflow/tools/lib_package/libtensorflow.tar.gz -C "$out"
|
|
# Write pkgconfig file.
|
|
mkdir "$out/lib/pkgconfig"
|
|
cat > "$out/lib/pkgconfig/tensorflow.pc" << EOF
|
|
Name: TensorFlow
|
|
Version: ${version}
|
|
Description: Library for computation using data flow graphs for scalable machine learning
|
|
Requires:
|
|
Libs: -L$out/lib -ltensorflow
|
|
Cflags: -I$out/include/tensorflow
|
|
EOF
|
|
|
|
# build the source code, then copy it to $python (build_pip_package
|
|
# actually builds a symlink farm so we must dereference them).
|
|
bazel-bin/tensorflow/tools/pip_package/build_pip_package --src "$PWD/dist"
|
|
cp -Lr "$PWD/dist" "$python"
|
|
'';
|
|
|
|
postFixup = lib.optionalString cudaSupport ''
|
|
find $out -type f \( -name '*.so' -or -name '*.so.*' \) | while read lib; do
|
|
addOpenGLRunpath "$lib"
|
|
done
|
|
'';
|
|
|
|
requiredSystemFeatures = [
|
|
"big-parallel"
|
|
];
|
|
};
|
|
|
|
meta = with lib; {
|
|
changelog = "https://github.com/tensorflow/tensorflow/releases/tag/v${version}";
|
|
description = "Computation using data flow graphs for scalable machine learning";
|
|
homepage = "http://tensorflow.org";
|
|
license = licenses.asl20;
|
|
maintainers = with maintainers; [ jyp abbradar ];
|
|
platforms = with platforms; linux ++ darwin;
|
|
broken = !(xlaSupport -> cudaSupport);
|
|
} // lib.optionalAttrs stdenv.isDarwin {
|
|
timeout = 86400; # 24 hours
|
|
maxSilent = 14400; # 4h, double the default of 7200s
|
|
};
|
|
};
|
|
|
|
in buildPythonPackage {
|
|
inherit version pname;
|
|
disabled = !isPy3k;
|
|
|
|
src = bazel-build.python;
|
|
|
|
# Adjust dependency requirements:
|
|
# - Drop tensorflow-io dependency until we get it to build
|
|
# - Relax flatbuffers and gast version requirements
|
|
# - The purpose of python3Packages.libclang is not clear at the moment and we don't have it packaged yet
|
|
# - keras and tensorlow-io-gcs-filesystem will be considered as optional for now.
|
|
postPatch = ''
|
|
sed -i setup.py \
|
|
-e '/tensorflow-io-gcs-filesystem/,+1d' \
|
|
-e "s/'flatbuffers[^']*',/'flatbuffers',/" \
|
|
-e "s/'gast[^']*',/'gast',/" \
|
|
-e "/'libclang[^']*',/d" \
|
|
-e "/'keras[^']*')\?,/d" \
|
|
-e "/'tensorflow-io-gcs-filesystem[^']*',/d" \
|
|
-e "s/'protobuf[^']*',/'protobuf',/" \
|
|
'';
|
|
|
|
# Upstream has a pip hack that results in bin/tensorboard being in both tensorflow
|
|
# and the propagated input tensorboard, which causes environment collisions.
|
|
# Another possibility would be to have tensorboard only in the buildInputs
|
|
# https://github.com/tensorflow/tensorflow/blob/v1.7.1/tensorflow/tools/pip_package/setup.py#L79
|
|
postInstall = ''
|
|
rm $out/bin/tensorboard
|
|
'';
|
|
|
|
setupPyGlobalFlags = [ "--project_name ${pname}" ];
|
|
|
|
# tensorflow/tools/pip_package/setup.py
|
|
propagatedBuildInputs = [
|
|
absl-py
|
|
astunparse
|
|
flatbuffers-python
|
|
gast
|
|
google-pasta
|
|
grpcio
|
|
h5py
|
|
keras-preprocessing
|
|
numpy
|
|
opt-einsum
|
|
packaging
|
|
protobuf-python
|
|
six
|
|
tensorflow-estimator-bin
|
|
termcolor
|
|
typing-extensions
|
|
wrapt
|
|
] ++ lib.optionals withTensorboard [
|
|
tensorboard
|
|
];
|
|
|
|
# remove patchelfUnstable once patchelf 0.14 with https://github.com/NixOS/patchelf/pull/256 becomes the default
|
|
nativeBuildInputs = lib.optionals cudaSupport [ addOpenGLRunpath patchelfUnstable ];
|
|
|
|
postFixup = lib.optionalString cudaSupport ''
|
|
find $out -type f \( -name '*.so' -or -name '*.so.*' \) | while read lib; do
|
|
addOpenGLRunpath "$lib"
|
|
|
|
patchelf --set-rpath "${cudatoolkit}/lib:${cudatoolkit.lib}/lib:${cudnn}/lib:${nccl}/lib:$(patchelf --print-rpath "$lib")" "$lib"
|
|
done
|
|
'';
|
|
|
|
# Actual tests are slow and impure.
|
|
# TODO try to run them anyway
|
|
# TODO better test (files in tensorflow/tools/ci_build/builds/*test)
|
|
# TEST_PACKAGES in tensorflow/tools/pip_package/setup.py
|
|
nativeCheckInputs = [
|
|
dill
|
|
keras
|
|
portpicker
|
|
tblib
|
|
];
|
|
checkPhase = ''
|
|
${python.interpreter} <<EOF
|
|
# A simple "Hello world"
|
|
import tensorflow as tf
|
|
hello = tf.constant("Hello, world!")
|
|
tf.print(hello)
|
|
|
|
# Fit a simple model to random data
|
|
import numpy as np
|
|
np.random.seed(0)
|
|
tf.random.set_seed(0)
|
|
model = tf.keras.models.Sequential([
|
|
tf.keras.layers.Dense(1, activation="linear")
|
|
])
|
|
model.compile(optimizer="sgd", loss="mse")
|
|
|
|
x = np.random.uniform(size=(1,1))
|
|
y = np.random.uniform(size=(1,))
|
|
model.fit(x, y, epochs=1)
|
|
EOF
|
|
'';
|
|
# Regression test for #77626 removed because not more `tensorflow.contrib`.
|
|
|
|
passthru = {
|
|
inherit cudaPackages;
|
|
deps = bazel-build.deps;
|
|
libtensorflow = bazel-build.out;
|
|
};
|
|
|
|
inherit (bazel-build) meta;
|
|
}
|