depot/third_party/nixpkgs/pkgs/applications/science/biology/bowtie2/default.nix
Default email 3e2acf8aff Project import generated by Copybara.
GitOrigin-RevId: d42cd445dde587e9a993cd9434cb43da07c4c5de
2021-05-20 18:08:51 -05:00

26 lines
717 B
Nix

{ lib, stdenv, fetchFromGitHub, cmake, tbb, zlib }:
stdenv.mkDerivation rec {
pname = "bowtie2";
version = "2.4.3";
src = fetchFromGitHub {
owner = "BenLangmead";
repo = pname;
rev = "v${version}";
sha256 = "sha256-uEKTB8935YY6lpXv2tJBQ1hrRk63vALLQb6SUXsVyhQ=";
};
nativeBuildInputs = [ cmake ];
buildInputs = [ tbb zlib ];
meta = with lib; {
description = "An ultrafast and memory-efficient tool for aligning sequencing reads to long reference sequences";
license = licenses.gpl3;
homepage = "http://bowtie-bio.sf.net/bowtie2";
maintainers = with maintainers; [ rybern ];
platforms = platforms.all;
broken = stdenv.isAarch64; # only x86 is supported
};
}