68 lines
1.7 KiB
Nix
68 lines
1.7 KiB
Nix
{ lib, gccStdenv, fetchFromGitLab, zlib }:
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let
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stdenv = gccStdenv;
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meta = with lib; {
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description = "Fast and exact comparison and clustering of sequences";
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homepage = "https://metabarcoding.org/sumatra";
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maintainers = [ maintainers.bzizou ];
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platforms = platforms.unix;
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};
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in rec {
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# Suma library
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sumalibs = stdenv.mkDerivation rec {
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version = "1.0.34";
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pname = "sumalibs";
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src = fetchFromGitLab {
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domain = "git.metabarcoding.org";
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owner = "obitools";
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repo = pname;
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rev = "sumalib_v${version}";
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sha256 = "0hwkrxzfz7m5wdjvmrhkjg8kis378iaqr5n4nhdhkwwhn8x1jn5a";
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};
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makeFlags = [ "PREFIX=$(out)" ];
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inherit meta;
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};
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# Sumatra
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sumatra = stdenv.mkDerivation rec {
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version = "1.0.34";
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pname = "sumatra";
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src = fetchFromGitLab {
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domain = "git.metabarcoding.org";
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owner = "obitools";
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repo = pname;
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rev = "${pname}_v${version}";
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sha256 = "1bbpbdkshdc3xffqnr1qfy8qk64ldsmdc3s8mrcrlx132rgbi5f6";
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};
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buildInputs = [ sumalibs zlib ];
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makeFlags = [
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"LIBSUMA=${sumalibs}/lib/libsuma.a"
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"LIBSUMAPATH=-L${sumalibs}"
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"PREFIX=$(out)"
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];
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inherit meta;
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};
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# Sumaclust
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sumaclust = stdenv.mkDerivation rec {
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version = "1.0.34";
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pname = "sumaclust";
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src = fetchFromGitLab {
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domain = "git.metabarcoding.org";
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owner = "obitools";
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repo = pname;
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rev = "${pname}_v${version}";
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sha256 = "0x8yi3k3jxhmv2krp4rcjlj2f9zg0qrk7gx4kpclf9c3yxgsgrds";
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};
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buildInputs = [ sumalibs ];
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makeFlags = [
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"LIBSUMA=${sumalibs}/lib/libsuma.a"
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"LIBSUMAPATH=-L${sumalibs}"
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"PREFIX=$(out)"
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];
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inherit meta;
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};
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}
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