depot/third_party/nixpkgs/pkgs/development/r-modules/bioc-packages.nix

# This file is generated from generate-r-packages.R. DO NOT EDIT.
# Execute the following command to update the file.
#
# Rscript generate-r-packages.R bioc >new && mv new bioc-packages.nix

{ self, derive }:
let derive2 = derive { biocVersion = "3.19"; };
in with self; {
  ABSSeq = derive2 { name="ABSSeq"; version="1.58.0"; sha256="0zqb2w055x4whgl3mljarsnps6lkz90fwlx2lnirbnrgmlnalwjz"; depends=[limma locfit]; };
  ABarray = derive2 { name="ABarray"; version="1.72.0"; sha256="1kfqq4df55pxl7gnwf24aaryxijym4gzqfjyif28arlbjci9hlv6"; depends=[Biobase multtest]; };
  ACE = derive2 { name="ACE"; version="1.22.0"; sha256="1gpn9z09cfcy2mj7m32xfb2bjjwl01g9qn9nqaivmqbi4k6icrr8"; depends=[Biobase GenomicRanges ggplot2 QDNAseq]; };
  ACME = derive2 { name="ACME"; version="2.60.0"; sha256="0jak83dlavhczaa2nqk5g2l0h4grnc9v24bg6v9mjfn6bqhl1s7j"; depends=[Biobase BiocGenerics]; };
  ADAM = derive2 { name="ADAM"; version="1.20.0"; sha256="0z0rmpwfhd8p6c4zscviwsningsm740r3pb95cl8brasfdg1kl3v"; depends=[dplyr DT GO_db KEGGREST knitr pbapply Rcpp stringr SummarizedExperiment]; };
  ADAMgui = derive2 { name="ADAMgui"; version="1.20.0"; sha256="08kxkb6hgbw7l9dv1wn3jfdkc0sizqdgmjkrzpq73q7rf0p4248g"; depends=[ADAM colorRamps data_table dplyr DT ggplot2 ggpubr ggrepel ggsignif GO_db gridExtra knitr RColorBrewer reshape2 shiny shinyjs stringi stringr testthat varhandle]; };
  ADImpute = derive2 { name="ADImpute"; version="1.14.0"; sha256="0kihg0mwm2ysgnx3jg6xln7ibvgmky0x2hjbcmdqlg65znczh4b6"; depends=[BiocParallel checkmate data_table DrImpute kernlab MASS Matrix rsvd S4Vectors SAVER SingleCellExperiment SummarizedExperiment]; };
  ADaCGH2 = derive2 { name="ADaCGH2"; version="2.44.0"; sha256="1j9dn0xw8mdfvi2ccm1d5j9q740wb89wqi6715n6jy3dljlc8irz"; depends=[aCGH bit cluster DNAcopy ff GLAD tilingArray waveslim]; };
  AGDEX = derive2 { name="AGDEX"; version="1.52.0"; sha256="088r2ahqjv61wnzp7by4c5v9aivahmyfkzr7prnkk3ff8zh6pznl"; depends=[Biobase GSEABase]; };
  AHMassBank = derive2 { name="AHMassBank"; version="1.4.0"; sha256="1inlsknrkb5am3aqfp3mk1fd0aaj89wfiq1549k7dqy71ng7rpf9"; depends=[AnnotationHubData]; };
  AIMS = derive2 { name="AIMS"; version="1.36.0"; sha256="0ljdv1gww01yi0h9j9br8kp67k5wizr1dy0091kngjcbn0dxzmla"; depends=[Biobase e1071]; };
  ALDEx2 = derive2 { name="ALDEx2"; version="1.36.0"; sha256="1bqpk93bbyajw2dm54d68f3dkc0jgcny109asfm6kcz7dg7szi3y"; depends=[BiocParallel directlabels GenomicRanges IRanges lattice latticeExtra multtest Rfast S4Vectors SummarizedExperiment zCompositions]; };
  AMARETTO = derive2 { name="AMARETTO"; version="1.20.0"; sha256="0n3w00x1qajkg43ip3l63k2qs0d1x2zv8wv4xj0iqwl6r6cqgxnf"; depends=[BiocFileCache callr circlize ComplexHeatmap curatedTCGAData doParallel dplyr DT foreach ggplot2 glmnet gridExtra httr impute knitr limma Matrix matrixStats MultiAssayExperiment Rcpp readr reshape2 rmarkdown tibble]; };
  AMOUNTAIN = derive2 { name="AMOUNTAIN"; version="1.30.0"; sha256="1y2k1vg31siic6j98700m54sswbj6wr4dvbw2mz3hlm0nmsmpxc1"; depends=[]; };
  ANCOMBC = derive2 { name="ANCOMBC"; version="2.6.0"; sha256="14jdfcv3hghl1z2f7zj2mdqdyblz5sn4l1iwh8bhvih86cpigb58"; depends=[CVXR DescTools doParallel doRNG energy foreach gtools Hmisc lme4 lmerTest MASS Matrix mia multcomp nloptr Rdpack S4Vectors SingleCellExperiment SummarizedExperiment TreeSummarizedExperiment]; };
  ANF = derive2 { name="ANF"; version="1.26.0"; sha256="00s2rlkh5snqmvlz5a21ilmm0ngh4g362y7iayr6f78nh8gwp617"; depends=[Biobase igraph MASS RColorBrewer survival]; };
  APAlyzer = derive2 { name="APAlyzer"; version="1.18.0"; sha256="102zs1rlz58dzvrgidf7cvq4wcmk6sffc9fv4b0xlqk5d6il32w4"; depends=[DESeq2 dplyr GenomicAlignments GenomicFeatures GenomicRanges ggplot2 ggrepel HybridMTest repmis Rsamtools Rsubread rtracklayer SummarizedExperiment tidyr VariantAnnotation]; };
  APL = derive2 { name="APL"; version="1.8.0"; sha256="1mkm9aad0qamqs7595mqcbz37qz4ykn0y24wsl3ngj6ifyfxf643"; depends=[ggplot2 ggrepel magrittr Matrix org_Hs_eg_db org_Mm_eg_db plotly reticulate rlang Seurat SingleCellExperiment SummarizedExperiment topGO viridisLite]; };
  ARRmNormalization = derive2 { name="ARRmNormalization"; version="1.44.0"; sha256="0wg799c5pzw9g0dbkaa5j4jyccvixqbc8x3xnwk3cgi1dsbhpk34"; depends=[ARRmData]; };
  ASAFE = derive2 { name="ASAFE"; version="1.30.0"; sha256="13qf4jvf0m6i46bwqxdhd4zllac370ckwnd9xh6p56r1lrgcl4sa"; depends=[]; };
  ASEB = derive2 { name="ASEB"; version="1.48.0"; sha256="1h5rgy2n7rxd72ypzwnfclw8h5hvdnac48fgbfll669z2k97dsmm"; depends=[]; };
  ASGSCA = derive2 { name="ASGSCA"; version="1.38.0"; sha256="0gvpb1pspm7zlllg77fbi3g6csa3cpp2lbljna2m0xfi0c5zdqvw"; depends=[MASS Matrix]; };
  ASICS = derive2 { name="ASICS"; version="2.20.1"; sha256="0halznbl3bflnn38rh9h5a5f0dsc88n6x6kwdffbpnin9i192q1k"; depends=[BiocParallel ggplot2 glmnet gridExtra Matrix mvtnorm PepsNMR plyr quadprog ropls SummarizedExperiment zoo]; };
  ASSET = derive2 { name="ASSET"; version="2.22.0"; sha256="1wqsnp7w3ml7azrx72fafcfbmjg4324jaxcijpcrlrrccxl5rwp4"; depends=[MASS msm rmeta]; };
  ASSIGN = derive2 { name="ASSIGN"; version="1.40.0"; sha256="1aq302awy940jrc1hnsf0rn05y4fg5m9aljsl1mclxxig6b8mrd2"; depends=[ggplot2 gplots msm Rlab sva yaml]; };
  ASURAT = derive2 { name="ASURAT"; version="1.8.0"; sha256="1fjzmvc4if1kqhwzhd38l5ryvk2qg3001jwapbnkfagxkhmnwymg"; depends=[circlize cluster ComplexHeatmap plot3D Rcpp S4Vectors SingleCellExperiment SummarizedExperiment]; };
  ASpli = derive2 { name="ASpli"; version="2.14.0"; sha256="1br4apbc3zn06ilg8fjb8xcxaimz4h7rnx9i60ak4wnpvgzgbyh2"; depends=[AnnotationDbi BiocGenerics BiocStyle data_table DT edgeR GenomicAlignments GenomicFeatures GenomicRanges Gviz htmltools igraph IRanges limma MASS pbmcapply Rsamtools S4Vectors tidyr txdbmaker UpSetR]; };
  ATACCoGAPS = derive2 { name="ATACCoGAPS"; version="1.6.0"; sha256="09h32q9y7z65ck33rwqzw2wkl8l6016s0sdkhf2g094yxhkz26rh"; depends=[BSgenome_Hsapiens_UCSC_hg19 BSgenome_Mmusculus_UCSC_mm10 chromVAR CoGAPS dplyr fgsea GeneOverlap GenomicFeatures GenomicRanges gplots gtools Homo_sapiens IRanges JASPAR2016 motifmatchr msigdbr Mus_musculus projectR rGREAT stringr TFBSTools tidyverse]; };
  ATACseqQC = derive2 { name="ATACseqQC"; version="1.28.0"; sha256="0licdpzhh6xlma0hnvs4rr4bjr5q4q3g18kipf0is47zj4l91smy"; depends=[BiocGenerics BiocParallel Biostrings BSgenome ChIPpeakAnno edgeR GenomeInfoDb GenomicAlignments GenomicRanges GenomicScores IRanges KernSmooth limma motifStack preseqR randomForest Rsamtools rtracklayer S4Vectors]; };
  ATACseqTFEA = derive2 { name="ATACseqTFEA"; version="1.6.0"; sha256="1dfw6vb0fx02xx21msvy8iarwmn41p1l3ryx1zs39668bz6zz06j"; depends=[BiocGenerics dplyr GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 ggrepel IRanges limma Matrix motifmatchr pracma Rsamtools rtracklayer S4Vectors SummarizedExperiment TFBSTools]; };
  AUCell = derive2 { name="AUCell"; version="1.26.0"; sha256="009ha82393giapvmfw2mi8pmi88f61mr69qj64y5vphcr1smvcl0"; depends=[BiocGenerics data_table DelayedArray DelayedMatrixStats GSEABase Matrix mixtools R_utils SummarizedExperiment]; };
  AWFisher = derive2 { name="AWFisher"; version="1.18.0"; sha256="0z5qs337zqqri2g3m69m85xg4x5sxnqlkbwz83vhnqfzmy9nqym0"; depends=[edgeR limma]; };
  AffiXcan = derive2 { name="AffiXcan"; version="1.22.0"; sha256="1241vpqkv4p3yarr6fsz1a7awvc4ff7q75ia3ra7vgkvg7gx9p93"; depends=[BiocParallel crayon MultiAssayExperiment SummarizedExperiment]; };
  AffyRNADegradation = derive2 { name="AffyRNADegradation"; version="1.50.0"; sha256="19lcs76jsdy5dz57rkdb8qqankpasrw2r5z4cy98q94az6582ix4"; depends=[affy]; };
  AgiMicroRna = derive2 { name="AgiMicroRna"; version="2.54.0"; sha256="1bm8rxfdgd0fx48fi70by08qr855jv6r4xcr7al2v9akv6vphws2"; depends=[affy affycoretools Biobase limma preprocessCore]; };
  AllelicImbalance = derive2 { name="AllelicImbalance"; version="1.42.0"; sha256="0mbmw450gdlr46ggvhrgimkbir3lg5dnqsfadn7yyrn7wkcr302f"; depends=[AnnotationDbi BiocGenerics Biostrings BSgenome GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges gridExtra Gviz IRanges lattice latticeExtra nlme Rsamtools S4Vectors seqinr SummarizedExperiment VariantAnnotation]; };
  AlphaBeta = derive2 { name="AlphaBeta"; version="1.18.0"; sha256="192jyfw2676x8pgcp9h4d78283p7n6gnsdw7wzphfjn12v266fb5"; depends=[BiocParallel data_table dplyr expm ggplot2 gtools igraph optimx plotly stringr]; };
  AlphaMissenseR = derive2 { name="AlphaMissenseR"; version="1.0.2"; sha256="1y8dzcrjqmqagnl4jiwcsfkj28n544j2d6li0ga6rrqmjwrnxzv0"; depends=[BiocBaseUtils BiocFileCache curl DBI dplyr duckdb memoise rjsoncons rlang spdl whisker]; };
  AlpsNMR = derive2 { name="AlpsNMR"; version="4.6.0"; sha256="1c8ynw9424ygc4wj4drbm9gdkdqwgb5z7p72zk3x5zh3zqai0d1d"; depends=[baseline BiocParallel cli dplyr fs future generics ggplot2 glue htmltools magrittr matrixStats mixOmics pcaPP purrr readxl reshape2 rlang rmarkdown scales signal speaq stringr tibble tidyr tidyselect vctrs]; };
  AnVIL = derive2 { name="AnVIL"; version="1.16.0"; sha256="0859gsgvljl2adjz4md52z4k1bcqh24i5xdfqddflw4gaq1zlm69"; depends=[BiocBaseUtils BiocManager dplyr DT futile_logger htmltools httr jsonlite miniUI rapiclient rlang shiny tibble tidyr tidyselect yaml]; };
  AnVILBilling = derive2 { name="AnVILBilling"; version="1.14.0"; sha256="0z05zp70l7r1wxf1s825gsgaj6kzj4fgw3962gp0z90whz398jyf"; depends=[bigrquery DBI dplyr DT ggplot2 lubridate magrittr plotly shiny shinytoastr]; };
  AnVILPublish = derive2 { name="AnVILPublish"; version="1.14.0"; sha256="030bm9hxqzgfp94h64wfizcbp4q8b9h2irk4zv679v0wnbspp3zz"; depends=[AnVIL BiocBaseUtils BiocManager httr jsonlite readr rmarkdown whisker yaml]; };
  AnVILWorkflow = derive2 { name="AnVILWorkflow"; version="1.4.0"; sha256="0qk20pg45z2fk7c3ickyzpv99w48pa3r2lfp1aqvh2blbdvp6z88"; depends=[AnVIL dplyr httr jsonlite tibble]; };
  Anaquin = derive2 { name="Anaquin"; version="2.28.0"; sha256="0hfvwzkfy6bm2ffghax5b228k2l6wf8zq82q13h6bxfps4wz0jgb"; depends=[DESeq2 ggplot2 knitr locfit plyr qvalue ROCR]; };
  AneuFinder = derive2 { name="AneuFinder"; version="1.32.0"; sha256="0dgmg0slyrh025wgz299dzzmpirlmdhmabxspci1qfarakw5yicf"; depends=[AneuFinderData bamsignals BiocGenerics Biostrings cowplot DNAcopy doParallel ecp foreach GenomeInfoDb GenomicAlignments GenomicRanges ggdendro ggplot2 ggrepel IRanges mclust reshape2 Rsamtools S4Vectors]; };
  AnnotationDbi = derive2 { name="AnnotationDbi"; version="1.66.0"; sha256="1g2yzbx7djkk8kccbclxv953iijmjvsjsalfv1ihmmcai33979rs"; depends=[Biobase BiocGenerics DBI IRanges KEGGREST RSQLite S4Vectors]; };
  AnnotationFilter = derive2 { name="AnnotationFilter"; version="1.28.0"; sha256="1sdm85sl4d9mqbjgjh3yizcmrzgz0g4x17s25gss2f6cjwy5jp40"; depends=[GenomicRanges lazyeval]; };
  AnnotationForge = derive2 { name="AnnotationForge"; version="1.46.0"; sha256="1ikri9hb1s0jzw1wyfpwsl02hg8dw2xs703sp085sbsq3cwk9cn1"; depends=[AnnotationDbi Biobase BiocGenerics DBI RCurl RSQLite S4Vectors XML]; };
  AnnotationHub = derive2 { name="AnnotationHub"; version="3.12.0"; sha256="1da2n13j2xysnd175zi7s6zm8yllnp0k59vygkx9id85jcldqf51"; depends=[AnnotationDbi BiocFileCache BiocGenerics BiocManager BiocVersion curl dplyr httr rappdirs RSQLite S4Vectors yaml]; };
  AnnotationHubData = derive2 { name="AnnotationHubData"; version="1.34.0"; sha256="0wcbghjvgr8sx1qg9kyjxb7znkxhihy7jvzycrv4pyq746154xbi"; depends=[AnnotationDbi AnnotationForge AnnotationHub Biobase BiocCheck BiocGenerics BiocManager biocViews Biostrings DBI futile_logger GenomeInfoDb GenomicFeatures GenomicRanges graph IRanges jsonlite OrganismDbi RCurl Rsamtools RSQLite rtracklayer S4Vectors XML]; };
  ArrayExpress = derive2 { name="ArrayExpress"; version="1.64.0"; sha256="1ad6h0pi04r9m3nwxrn7sha837m95kwii8z6s7j4zbka9ijy2pr4"; depends=[Biobase httr jsonlite limma oligo rlang]; };
  AssessORF = derive2 { name="AssessORF"; version="1.22.0"; sha256="1gzaafsfqzy2x35i251gvkd1syif80qb08kkvgnf1i6c8d2czmps"; depends=[Biostrings DECIPHER GenomicRanges IRanges]; };
  BADER = derive2 { name="BADER"; version="1.42.0"; sha256="15lsvfmp4qsrv12bcrz5q8yz8xyg9rckrcflr3k6si03z2vw812p"; depends=[]; };
  BAGS = derive2 { name="BAGS"; version="2.44.0"; sha256="1xc7gp5fljqz26lj8sjcilm01g636p4wlzy4pzy5wgqxgfcw3zps"; depends=[Biobase breastCancerVDX]; };
  BANDITS = derive2 { name="BANDITS"; version="1.20.0"; sha256="1iizs0bvs7rbkwv3vs6xk26jy222kql80fp6cki0qs9h9igpzk5h"; depends=[BiocParallel data_table doParallel doRNG DRIMSeq foreach ggplot2 MASS R_utils Rcpp RcppArmadillo]; };
  BASiCS = derive2 { name="BASiCS"; version="2.16.0"; sha256="0rcc8na0nravf2687bcvbaklwa0z8b43lvdy0nf9xvfrfpr1zjnw"; depends=[assertthat Biobase BiocGenerics BiocParallel coda cowplot ggExtra ggplot2 hexbin MASS Matrix matrixStats posterior Rcpp RcppArmadillo reshape2 S4Vectors scran scuttle SingleCellExperiment SummarizedExperiment viridis]; };
  BASiCStan = derive2 { name="BASiCStan"; version="1.6.0"; sha256="1q6lhmdy19v30aq9hzphxicq6blyzr6z94wcqsqzwb0xjij1z5f9"; depends=[BASiCS BH glmGamPoi Rcpp RcppEigen RcppParallel rstan rstantools scran scuttle SingleCellExperiment StanHeaders SummarizedExperiment]; };
  BBCAnalyzer = derive2 { name="BBCAnalyzer"; version="1.34.0"; sha256="16zm6fix5f5277dkdaxyxl1q1n52960ma3vw8001a5bjxhic58rn"; depends=[Biostrings GenomicRanges IRanges Rsamtools SummarizedExperiment VariantAnnotation]; };
  BCRANK = derive2 { name="BCRANK"; version="1.66.0"; sha256="0ydajrbggvqakdf01pq5mqi1v3slz00irpbx4s9fmxvci9ganwp7"; depends=[Biostrings]; };
  BEARscc = derive2 { name="BEARscc"; version="1.24.0"; sha256="0f66pbhf4fz66021k7f6rlwzxdikznbhjqqpxwrj07yg65q5sd1l"; depends=[data_table ggplot2 SingleCellExperiment]; };
  BEAT = derive2 { name="BEAT"; version="1.42.0"; sha256="0s63nwf21ai1gys0dzjsjqy64sal7dpp040f0jqskyf2y6gdf9v9"; depends=[Biostrings BSgenome GenomicRanges ShortRead]; };
  BERT = derive2 { name="BERT"; version="1.0.0"; sha256="1n2v8sdvh40sqz8gpzszwhp2w6npxnl48bsp9l0bzz8w148cwyk8"; depends=[BiocParallel cluster comprehenr foreach invgamma iterators janitor limma logging SummarizedExperiment sva]; };
  BEclear = derive2 { name="BEclear"; version="2.20.0"; sha256="17i93h0q1fwl8wymmlgjsh8hbnaws6baf4jid5k579aap32zb5ha"; depends=[abind BiocParallel data_table dixonTest futile_logger ids Matrix Rcpp Rdpack]; };
  BG2 = derive2 { name="BG2"; version="1.4.0"; sha256="0nby9b7kha4bz2x7a8b9nk78qai98m76csndnaikcpg79mpzygv5"; depends=[caret GA MASS Matrix memoise]; };
  BHC = derive2 { name="BHC"; version="1.56.0"; sha256="1fam1k42dwd0gh7dw2gz4yl6bnbkfrw0bd44v8sdpvwwyd1dq1r8"; depends=[]; };
  BLMA = derive2 { name="BLMA"; version="1.28.0"; sha256="1b6hcjy6dv55cpprm8ylz7akl4vyvi6lky0qc31q6skxxdp3266k"; depends=[Biobase graph GSA limma metafor PADOG ROntoTools]; };
  BOBaFIT = derive2 { name="BOBaFIT"; version="1.8.0"; sha256="18xzy91rblcdc4x8c4cxi5b03cskdwjpryzajhzycdpdb4hfg89q"; depends=[dplyr GenomicRanges ggbio ggforce ggplot2 magrittr NbClust plyranges stringr tidyr]; };
  BPRMeth = derive2 { name="BPRMeth"; version="1.30.0"; sha256="0ax88n7i72lhlrrq4zc6ay5mg9ds37qlg10xafgkilgliz309ykn"; depends=[assertthat BiocStyle cowplot data_table doParallel e1071 earth foreach GenomicRanges ggplot2 IRanges kernlab magrittr MASS matrixcalc mvtnorm randomForest Rcpp RcppArmadillo S4Vectors truncnorm]; };
  BRAIN = derive2 { name="BRAIN"; version="1.50.0"; sha256="0l712ilc308amafhbl9g6g6jvn1px0x0wlc53y2ql397l9bivva3"; depends=[Biostrings lattice PolynomF]; };
  BREW3R_r = derive2 { name="BREW3R.r"; version="1.0.1"; sha256="0i0r5sryvq721dlffs9d092776jx0j7r9mfiyi24glgqalmrslag"; depends=[GenomicRanges rlang S4Vectors]; };
  BSgenome = derive2 { name="BSgenome"; version="1.72.0"; sha256="1pjbkakrycvaifl7xrmri2h94zc1ap8a9d1q4c83qji3xa21cm4q"; depends=[BiocGenerics BiocIO Biostrings GenomeInfoDb GenomicRanges IRanges matrixStats Rsamtools rtracklayer S4Vectors XVector]; };
  BSgenomeForge = derive2 { name="BSgenomeForge"; version="1.4.0"; sha256="0100y9lqj0xjz1ycazn4v74m7h26fxdbb03xa7ryvpdq61b0gc8p"; depends=[Biobase BiocGenerics BiocIO Biostrings BSgenome GenomeInfoDb GenomicRanges IRanges rtracklayer S4Vectors]; };
  BUMHMM = derive2 { name="BUMHMM"; version="1.28.0"; sha256="0c35x7bjp97qiahykkvk8krsnvy1w29qvrb6x8wa4vwn58a56naa"; depends=[Biostrings devtools gtools IRanges stringi SummarizedExperiment]; };
  BUS = derive2 { name="BUS"; version="1.60.0"; sha256="1xwdqz9lyz110bh96ihldwg50k7fbnvnkivyqd9qj1iwk3vz7qd6"; depends=[infotheo minet]; };
  BUScorrect = derive2 { name="BUScorrect"; version="1.22.0"; sha256="1crq6h9s3kxk1z7xpapq1jwwqwpa2fznhykm84k2zjl8jzvc7lmi"; depends=[gplots SummarizedExperiment]; };
  BUSpaRse = derive2 { name="BUSpaRse"; version="1.18.0"; sha256="08lq6g6sh5vgr4nn3cmn5gz735zsf8lwhhlqpg9l3d8lzfcb22d5"; depends=[AnnotationDbi AnnotationFilter BH BiocGenerics biomaRt Biostrings BSgenome dplyr ensembldb GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 IRanges magrittr Matrix plyranges Rcpp RcppArmadillo RcppProgress S4Vectors stringr tibble tidyr zeallot]; };
  BUSseq = derive2 { name="BUSseq"; version="1.10.0"; sha256="19ajpfgz3aj1p6955z128smanna1gff6dfgh7dz8vhjyyz5nbi1q"; depends=[gplots S4Vectors SingleCellExperiment SummarizedExperiment]; };
  BaalChIP = derive2 { name="BaalChIP"; version="1.30.0"; sha256="1xm6czgbfz2rjrz5996d0n7xmlh9pd1mw9i8ac66pmn5fi44pbz2"; depends=[coda doBy doParallel foreach GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges reshape2 Rsamtools scales]; };
  BadRegionFinder = derive2 { name="BadRegionFinder"; version="1.32.0"; sha256="1hs1mv8gj4w0wk6sw6r08j237vw3lhjrv9zip5nk6l1g1r0pg597"; depends=[biomaRt GenomicRanges Rsamtools S4Vectors VariantAnnotation]; };
  Banksy = derive2 { name="Banksy"; version="1.0.0"; sha256="1qz5nhf2qcdwcbi4kbwdjgbxpql8w5391cnb8i73gj54chc8bvn1"; depends=[aricode data_table dbscan igraph irlba leidenAlg matrixStats mclust RcppHungarian S4Vectors SingleCellExperiment SpatialExperiment SummarizedExperiment uwot]; };
  BaseSpaceR = derive2 { name="BaseSpaceR"; version="1.48.0"; sha256="02f2l42p08xags155qydz97ipg5vya0prmrlw4kvahgbq5p0xm44"; depends=[RCurl RJSONIO]; };
  Basic4Cseq = derive2 { name="Basic4Cseq"; version="1.40.0"; sha256="0ipxhdsqa8q49d2i17kvwyn6w2rpyl9jmq9bhch7cjawykjla5kf"; depends=[Biostrings BSgenome_Ecoli_NCBI_20080805 caTools GenomicAlignments GenomicRanges RCircos]; };
  BasicSTARRseq = derive2 { name="BasicSTARRseq"; version="1.32.0"; sha256="1w69qc81pj3c4gq158ag59wbpm2aaiqmnnb79m0h7dlsnf964cjv"; depends=[GenomeInfoDb GenomicAlignments GenomicRanges IRanges S4Vectors]; };
  BatchQC = derive2 { name="BatchQC"; version="2.0.0"; sha256="1kijj3ivlrwk4490jsb7vsrc7kmx32hla52cg3zb3vj6l5cwq7g6"; depends=[data_table DESeq2 dplyr EBSeq ggdendro ggnewscale ggplot2 limma matrixStats pheatmap RColorBrewer reader reshape2 scran shiny SummarizedExperiment sva tibble tidyr tidyverse]; };
  BayesKnockdown = derive2 { name="BayesKnockdown"; version="1.30.0"; sha256="05plmh36s00jh4ckcgvi2s9ypa8mxlsy23mzysazbfsr022x3vqa"; depends=[Biobase]; };
  BayesSpace = derive2 { name="BayesSpace"; version="1.14.0"; sha256="0q1haqsyc61yxz1n197sv3s6csjpns4fi288kf58nnf5jgdwnyx5"; depends=[assertthat BiocFileCache BiocSingular coda DirichletReg ggplot2 Matrix mclust purrr Rcpp RcppArmadillo RcppDist RcppProgress RCurl rhdf5 S4Vectors scales scater scran SingleCellExperiment SummarizedExperiment xgboost]; };
  BeadDataPackR = derive2 { name="BeadDataPackR"; version="1.56.0"; sha256="0wz3prri0mfjczmb432faxfjc99wg4lq26l3a60rmxyxq8mcnpkv"; depends=[]; };
  BgeeDB = derive2 { name="BgeeDB"; version="2.30.0"; sha256="1jbb93inv7z0i8b1jr6ax98gqkqn73m86hj61irgyysk7hn4bbg6"; depends=[Biobase curl data_table digest dplyr graph R_utils RCurl RSQLite tidyr topGO]; };
  BiFET = derive2 { name="BiFET"; version="1.24.0"; sha256="148j41mawxvzyal9lfjy7h1gp0w8zwmgc7s32wiqa30qjcc82snx"; depends=[GenomicRanges poibin]; };
  BiGGR = derive2 { name="BiGGR"; version="1.40.0"; sha256="1ja5j9753rgx61jwkax0mzkxh7ybh3m4ampkr5ikw3afda23wg1z"; depends=[hyperdraw hypergraph LIM limSolve rsbml stringr]; };
  BiRewire = derive2 { name="BiRewire"; version="3.36.0"; sha256="1l3hkq6n7i9j82aym4ngwablj8jqb70a7y6skx0rjkflya6wbim7"; depends=[igraph Matrix Rtsne slam]; };
  BiSeq = derive2 { name="BiSeq"; version="1.44.0"; sha256="12nkdaz54ga133v38mmqaf3xcsx7ps2rcxxvni100vsk93hv155z"; depends=[betareg Biobase BiocGenerics Formula GenomeInfoDb GenomicRanges globaltest IRanges lokern rtracklayer S4Vectors SummarizedExperiment]; };
  BicARE = derive2 { name="BicARE"; version="1.62.0"; sha256="0397xg4sj988b0chzfpy23dszpjbdkch59wfynbn4pwyvl0qmp9j"; depends=[Biobase GO_db GSEABase multtest]; };
  BindingSiteFinder = derive2 { name="BindingSiteFinder"; version="2.2.0"; sha256="1icgz7wfayqzr1wd0n7sb71bh149d4d1m7rh5s5ap07llnn7vsq1"; depends=[ComplexHeatmap dplyr forcats GenomeInfoDb GenomicFeatures GenomicRanges ggdist ggforce ggplot2 IRanges kableExtra lifecycle matrixStats plyr RColorBrewer rlang rtracklayer S4Vectors tibble tidyr]; };
  BioCartaImage = derive2 { name="BioCartaImage"; version="1.2.0"; sha256="0kcqhgr6q86b874i56p0cai8kiqbx8q3vk40xq221dzjf19r8ag8"; depends=[magick]; };
  BioCor = derive2 { name="BioCor"; version="1.28.0"; sha256="0jpi51f9cv3sv4l69974bba8c8k0inb6zxviv7i907ldaiiblr07"; depends=[BiocParallel GSEABase Matrix]; };
  BioMVCClass = derive2 { name="BioMVCClass"; version="1.72.0"; sha256="0dfdksk3nc6pzw21sbd4cdqr05489qh4984wv0f906hyb52waxk2"; depends=[Biobase graph MVCClass Rgraphviz]; };
  BioNAR = derive2 { name="BioNAR"; version="1.6.0"; sha256="1airs789p970v5j4nfmsvba70r3yadc4rw3z3sykqnc1qxzinvxq"; depends=[AnnotationDbi clusterCons cowplot data_table dplyr fgsea ggplot2 ggrepel GO_db igraph latex2exp Matrix minpack_lm org_Hs_eg_db poweRlaw Rdpack RSpectra rSpectral scales stringr viridis WGCNA]; };
  BioNERO = derive2 { name="BioNERO"; version="1.12.0"; sha256="02jqlpd31mhxbvksj7ny34f6dv8skkkr76lkiaj5gm078kfr0zx5"; depends=[BiocParallel ComplexHeatmap dynamicTreeCut GENIE3 ggdendro ggnetwork ggplot2 ggrepel igraph intergraph matrixStats minet NetRep patchwork RColorBrewer reshape2 rlang SummarizedExperiment sva WGCNA]; };
  BioNet = derive2 { name="BioNet"; version="1.64.0"; sha256="0lpqvm0cx7pnb99jh7na49x10w2v04xydiwxn9l41ngxysp8v0h6"; depends=[AnnotationDbi Biobase graph igraph RBGL]; };
  BioQC = derive2 { name="BioQC"; version="1.32.0"; sha256="14yrqf5wl9r596zvlpf4y48nykg0gwzlxfgi3kdx0i5pfgvi43vk"; depends=[Biobase edgeR Rcpp]; };
  Biobase = derive2 { name="Biobase"; version="2.64.0"; sha256="09xnl0qq4qsd981i9srw07228lgashcvcavi8k0izdzfyk6ka7m2"; depends=[BiocGenerics]; };
  BiocBaseUtils = derive2 { name="BiocBaseUtils"; version="1.6.0"; sha256="0f8bzhpi6xla52sbvpd20sgli7mp5xfk2aqpcv6jkf8s59jsmn54"; depends=[]; };
  BiocBook = derive2 { name="BiocBook"; version="1.2.0"; sha256="0rdsx2slwp69l6svsaj3pndd6bv318jkla5j84avwgfi63wks092"; depends=[available BiocGenerics cli dplyr gert gh gitcreds glue httr purrr quarto renv rlang rprojroot stringr tibble usethis yaml]; };
  BiocCheck = derive2 { name="BiocCheck"; version="1.40.0"; sha256="0rvr68d5anir7bj913nxwwfj7i3h2dvadcfvjjdbdr3m35wyx1g8"; depends=[BiocBaseUtils BiocFileCache BiocManager biocViews callr codetools graph httr2 knitr rvest stringdist]; };
  BiocFHIR = derive2 { name="BiocFHIR"; version="1.6.0"; sha256="0zw59xb6jxxqg9aiwn6h4ak4056b64y22irkysl51rvdrb12n32h"; depends=[BiocBaseUtils dplyr DT graph jsonlite shiny tidyr visNetwork]; };
  BiocFileCache = derive2 { name="BiocFileCache"; version="2.12.0"; sha256="0jv6hni5x91ssvz4ilhi3y6lylrw4w3xfk8ljmq6gjvyl886sw9f"; depends=[curl DBI dbplyr dplyr filelock httr RSQLite]; };
  BiocGenerics = derive2 { name="BiocGenerics"; version="0.50.0"; sha256="0500ya3df53xx1dfdmk50bh30ja28y6qkdwds1c1m4c7q0h2xmqi"; depends=[]; };
  BiocHail = derive2 { name="BiocHail"; version="1.4.0"; sha256="1p8wkl31c7snv8l8zkmg2hf9pb2p0gif4gfgjia0npi91y2h5hfp"; depends=[basilisk BiocFileCache BiocGenerics dplyr reticulate]; };
  BiocHubsShiny = derive2 { name="BiocHubsShiny"; version="1.4.0"; sha256="19ihc6fi04kbgmlvn5k1cjpckc03p5yfjpc3gjmmf3pn69qgljzf"; depends=[AnnotationHub DT ExperimentHub htmlwidgets S4Vectors shiny shinyAce shinyjs shinythemes shinytoastr]; };
  BiocIO = derive2 { name="BiocIO"; version="1.14.0"; sha256="0ppsldpn3vbliimjvnxadn61crck45j581dw4lc5f3w1vy5vs44h"; depends=[BiocGenerics S4Vectors]; };
  BiocNeighbors = derive2 { name="BiocNeighbors"; version="1.22.0"; sha256="1krg4cs406ymk27qcj3j1jsl8vl4j9k5zvwf4vzxgbw3x6lpywid"; depends=[BiocParallel Matrix Rcpp RcppHNSW S4Vectors]; };
  BiocOncoTK = derive2 { name="BiocOncoTK"; version="1.24.0"; sha256="0h4cr7lrmbyx7kdj81s7ff75svr01rvzn54svqi93vjilawmpbm3"; depends=[bigrquery car ComplexHeatmap curatedTCGAData DBI dplyr DT GenomicFeatures GenomicRanges ggplot2 ggpubr graph httr IRanges magrittr MASS plyr Rgraphviz rjson S4Vectors scales shiny SummarizedExperiment]; };
  BiocParallel = derive2 { name="BiocParallel"; version="1.38.0"; sha256="1miw26r2a8wvgnfr9sapfv6rqk219rmsyjh6v04annafxdxy15ky"; depends=[BH codetools cpp11 futile_logger snow]; };
  BiocPkgTools = derive2 { name="BiocPkgTools"; version="1.22.0"; sha256="1nbzr1yjz65r0y8c312hnvagnc1pdgda4v6sxbpvlkl3z93jsy6x"; depends=[BiocFileCache BiocManager biocViews dplyr DT gh graph htmltools htmlwidgets httr igraph jsonlite magrittr RBGL readr rlang rorcid rvest stringr tibble xml2]; };
  BiocSet = derive2 { name="BiocSet"; version="1.18.0"; sha256="1r1if1k7qgni3dk7gsl4vcyvd6hnhx94rcq5yi9w7dvyyrbvnwwa"; depends=[AnnotationDbi BiocIO dplyr KEGGREST ontologyIndex plyr rlang S4Vectors tibble tidyr]; };
  BiocSingular = derive2 { name="BiocSingular"; version="1.20.0"; sha256="1xl9wn3slj3ywjglb8zq2p0ifx4xwxbqsm99fjlf6hanfhmnxyay"; depends=[beachmat BiocGenerics BiocParallel DelayedArray irlba Matrix Rcpp rsvd S4Vectors ScaledMatrix]; };
  BiocSklearn = derive2 { name="BiocSklearn"; version="1.26.0"; sha256="19s38zpgdscbrqypyg17l1jw53x88lgkcrqg20gchfi6mig36a3w"; depends=[basilisk reticulate SummarizedExperiment]; };
  BiocStyle = derive2 { name="BiocStyle"; version="2.32.0"; sha256="1vm9wj4hzzjivdi6rnxyhxwqscdvbmc45w9zq17h3r53qnva530x"; depends=[BiocManager bookdown knitr rmarkdown yaml]; };
  BiocVersion = derive2 { name="BiocVersion"; version="3.19.1"; sha256="1zhm28313gsbscfhfdbqizvb5v67n4l0dapjmb1xq010ikly95mh"; depends=[]; };
  BiocWorkflowTools = derive2 { name="BiocWorkflowTools"; version="1.30.0"; sha256="1gw0lmdhkzp5ar54yv9jagqmpxp7j9ajfmdqb2y2qrnhh39hymzs"; depends=[BiocStyle bookdown git2r httr knitr rmarkdown rstudioapi stringr usethis]; };
  Biostrings = derive2 { name="Biostrings"; version="2.72.1"; sha256="067vy2v7spbdsknvi0fcpdi085kn8v20pyrhkc7wy357v21h7hgs"; depends=[BiocGenerics crayon GenomeInfoDb IRanges S4Vectors XVector]; };
  BloodGen3Module = derive2 { name="BloodGen3Module"; version="1.12.0"; sha256="0mksc9jfzcj255a01hg8gjrs6k2plkpfqgv951csldvy7vqrdkma"; depends=[circlize ComplexHeatmap ExperimentHub ggplot2 gtools limma matrixStats preprocessCore randomcoloR reshape2 SummarizedExperiment testthat V8]; };
  BridgeDbR = derive2 { name="BridgeDbR"; version="2.14.0"; sha256="0nsn1i5ah3l95wd1afcppxb364l44r3apma0aa79g4jday4zhbv5"; depends=[curl rJava]; };
  BrowserViz = derive2 { name="BrowserViz"; version="2.26.0"; sha256="0wq1vc6m54kb8dw6c0qzw8hvvwjq78lqd18whph2nmywjcy9j9hw"; depends=[BiocGenerics httpuv jsonlite]; };
  BubbleTree = derive2 { name="BubbleTree"; version="2.34.0"; sha256="0l69q8l6dacyqdbfdnxlg70f064xm8w5p07pi2x0baacxv8bs5d4"; depends=[Biobase BiocGenerics BiocStyle biovizBase dplyr e1071 GenomicRanges ggplot2 gridExtra gtable gtools IRanges limma magrittr plyr RColorBrewer WriteXLS]; };
  BufferedMatrix = derive2 { name="BufferedMatrix"; version="1.68.0"; sha256="1rd446pzwplkjzqqg19ba3gn94kvsxxi472n6r9raxrggqic0bmi"; depends=[]; };
  BufferedMatrixMethods = derive2 { name="BufferedMatrixMethods"; version="1.68.0"; sha256="1y8skcqbql4mi1zi53771jwsyw8665b13xyh9bnrv18j18axldk6"; depends=[BufferedMatrix]; };
  BumpyMatrix = derive2 { name="BumpyMatrix"; version="1.12.0"; sha256="1f8xa184x6l363psbqn0a5yh16ghm2mciv726aii58bkln5qwkmb"; depends=[IRanges Matrix S4Vectors]; };
  CAEN = derive2 { name="CAEN"; version="1.12.0"; sha256="1z4prnbh7y6i9b0d3y4fncmsj8vrz4i0k48l69kh14xi9lyhc773"; depends=[PoiClaClu SummarizedExperiment]; };
  CAFE = derive2 { name="CAFE"; version="1.40.0"; sha256="1vq1yf78yfsfnsjpqb89zghzr677mdwvpi5zl3ikz2j5z40h1rjj"; depends=[affy annotate Biobase biovizBase GenomicRanges ggbio ggplot2 gridExtra IRanges]; };
  CAGEfightR = derive2 { name="CAGEfightR"; version="1.24.0"; sha256="1i6q5bwg55d3iydcy3h6j9hg30581vvc592rs5cac310qxzcj8hj"; depends=[assertthat BiocGenerics BiocParallel GenomeInfoDb GenomicAlignments GenomicFeatures GenomicFiles GenomicInteractions GenomicRanges Gviz InteractionSet IRanges Matrix pryr rtracklayer S4Vectors SummarizedExperiment]; };
  CAGEr = derive2 { name="CAGEr"; version="2.10.0"; sha256="1amx7l5y1v8ccmlpjmr9wm2dbc85xadx4ayy8m45vabi97j8nrp4"; depends=[BiocGenerics BiocParallel BSgenome CAGEfightR data_table DelayedArray DelayedMatrixStats formula_tools GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gtools IRanges KernSmooth memoise MultiAssayExperiment plyr reshape2 Rsamtools rtracklayer S4Vectors som stringdist stringi SummarizedExperiment vegan VGAM]; };
  CAMERA = derive2 { name="CAMERA"; version="1.60.0"; sha256="1wcihfi7vzdb5xkk2r7cdb4pqdbnph01m3dsz126984rzplpcd44"; depends=[Biobase graph Hmisc igraph RBGL xcms]; };
  CARNIVAL = derive2 { name="CARNIVAL"; version="2.14.0"; sha256="05cjffkhawhrbvd9m4blm8klkhpv939qgnhpyx0mqfmk8b63rc26"; depends=[dplyr igraph lpSolve readr rjson rmarkdown stringr tibble tidyr]; };
  CATALYST = derive2 { name="CATALYST"; version="1.28.0"; sha256="168yfkqlg6af8ndlw4wzb9adg4lgkgkjbsi4a435ks0n4c9dycb7"; depends=[circlize ComplexHeatmap ConsensusClusterPlus cowplot data_table dplyr drc flowCore FlowSOM ggplot2 ggrepel ggridges gridExtra Matrix matrixStats nnls purrr RColorBrewer reshape2 Rtsne S4Vectors scales scater SingleCellExperiment SummarizedExperiment]; };
  CBEA = derive2 { name="CBEA"; version="1.4.0"; sha256="0j43lvz55xawwk723rsfpir6vir5wbxpwslpk4x2frslf5i00mky"; depends=[BiocParallel BiocSet dplyr fitdistrplus generics glue goftest lmom magrittr mixtools Rcpp rlang SummarizedExperiment tibble tidyr TreeSummarizedExperiment]; };
  CBNplot = derive2 { name="CBNplot"; version="1.4.0"; sha256="1n85clswpk1xxfq423sgk38qb9kjkjj2kghnxw8a4618vxypwsrv"; depends=[BiocFileCache bnlearn clusterProfiler depmap dplyr enrichplot ExperimentHub ggdist ggforce ggplot2 ggraph graphite graphlayouts igraph magrittr oaqc org_Hs_eg_db patchwork purrr pvclust reshape2 rlang Rmpfr stringr tidyr]; };
  CCPROMISE = derive2 { name="CCPROMISE"; version="1.30.0"; sha256="0qicm8zgr4897m0ldlmsrchi66b3swfdxy2gv12pnssjmrybq5di"; depends=[Biobase CCP GSEABase PROMISE]; };
  CCPlotR = derive2 { name="CCPlotR"; version="1.2.0"; sha256="05qh8yqk2yv4vw314aflys7qn4kwhy839wj5cdw9iysaklkyjscg"; depends=[circlize ComplexHeatmap dplyr forcats ggbump ggh4x ggplot2 ggraph ggtext igraph patchwork plyr RColorBrewer scales scatterpie stringr tibble tidyr viridis]; };
  CDI = derive2 { name="CDI"; version="1.2.0"; sha256="0nc4s8prs6p0k7qp2lc5fzdqx177y1xamrwizldwi5p3yq1zq1nx"; depends=[BiocParallel ggplot2 ggsci matrixStats reshape2 Seurat SeuratObject SingleCellExperiment SummarizedExperiment]; };
  CEMiTool = derive2 { name="CEMiTool"; version="1.28.0"; sha256="1pcyw8njyrcjriyzq52km0qhn1n288gqvn1qdkzx2yfv4a1i6rxk"; depends=[clusterProfiler data_table dplyr DT fastcluster fgsea ggdendro ggplot2 ggpmisc ggrepel ggthemes gridExtra gtable htmltools igraph intergraph knitr matrixStats network pracma rmarkdown scales sna stringr WGCNA]; };
  CFAssay = derive2 { name="CFAssay"; version="1.38.0"; sha256="1j2bprw0dq4cn4md2ixh3jmk507w0zlzm65gvx9k3z924la0hyhv"; depends=[]; };
  CGEN = derive2 { name="CGEN"; version="3.40.0"; sha256="01ayir95zhdcxnczzggx914q9x0awcr3hvfxvswqdjcl5a5490k1"; depends=[mvtnorm survival]; };
  CGHbase = derive2 { name="CGHbase"; version="1.64.0"; sha256="1fz39fdkfvfhzm69pfvliqvp48wsldwm3kpgbsaacrdh46jg5vzk"; depends=[Biobase marray]; };
  CGHcall = derive2 { name="CGHcall"; version="2.66.0"; sha256="1gjd3ggiw93cwcacjb1472ia98aaapj9gln04v5pbwmp2r4xfcs7"; depends=[Biobase CGHbase DNAcopy impute snowfall]; };
  CGHnormaliter = derive2 { name="CGHnormaliter"; version="1.58.0"; sha256="06zsh097v8hfz9yh7q4ppvnlxvgqgs3yzm724khbzi8xfz1h3yja"; depends=[Biobase CGHbase CGHcall]; };
  CGHregions = derive2 { name="CGHregions"; version="1.62.0"; sha256="0swyfbc37mxghphgrlh735gg3w3wnlmplrrlksr7jb8gdzvcczbk"; depends=[Biobase CGHbase]; };
  CHETAH = derive2 { name="CHETAH"; version="1.20.0"; sha256="19vb0c9kla6jn79v5sc8sig195lnzzhki2089pvjsy4gw2q3nmnh"; depends=[bioDist corrplot cowplot dendextend ggplot2 pheatmap plotly reshape2 S4Vectors shiny SingleCellExperiment SummarizedExperiment]; };
  CHRONOS = derive2 { name="CHRONOS"; version="1.32.0"; sha256="06ynbgmzp820l85n25lrhks1vl1ccaf3giypgp59s79v496vps3x"; depends=[biomaRt circlize doParallel foreach graph igraph openxlsx RBGL RCurl rJava XML]; };
  CIMICE = derive2 { name="CIMICE"; version="1.12.0"; sha256="18m6mb1r9s8cqi1lsignmf9p8q7qigazxyif14z6f1h5kdcs6707"; depends=[assertthat dplyr expm ggcorrplot ggplot2 ggraph glue igraph maftools Matrix networkD3 purrr tidygraph tidyr visNetwork]; };
  CINdex = derive2 { name="CINdex"; version="1.32.0"; sha256="1cgq0bcrgdwzxci47issdck4pz8pnbpfzz7i57mi0ga3jqih0g2i"; depends=[bitops dplyr GenomeInfoDb GenomicRanges gplots gridExtra IRanges png S4Vectors som stringr]; };
  CMA = derive2 { name="CMA"; version="1.62.0"; sha256="08q64y5f52p3skpxk7fva30h41ar3751jk3528gicnqngbb3wv3g"; depends=[Biobase]; };
  CNAnorm = derive2 { name="CNAnorm"; version="1.50.0"; sha256="0z9x4khrsdinb5dhi7zgfa4pj55h7300fp3a636akwjq3pwzlvlp"; depends=[DNAcopy]; };
  CNEr = derive2 { name="CNEr"; version="1.40.0"; sha256="19kfh7p8zlb1nbwpsj6i1b7pqy829dij7n7iavznhxw44cmif6sv"; depends=[annotate BiocGenerics Biostrings DBI GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 GO_db IRanges KEGGREST poweRlaw pwalign R_utils readr reshape2 RSQLite rtracklayer S4Vectors XVector]; };
  CNORdt = derive2 { name="CNORdt"; version="1.46.0"; sha256="1f9d2jmqxcmzvwvshf8yni0j28y13cdb5w9z1mcl7f3gcd0vn3rx"; depends=[abind CellNOptR]; };
  CNORfeeder = derive2 { name="CNORfeeder"; version="1.44.0"; sha256="1q1xpdg0qbh5cqnjc080gbkaw20p3xksc76f7dxsprlnzzad9id5"; depends=[CellNOptR graph]; };
  CNORfuzzy = derive2 { name="CNORfuzzy"; version="1.46.0"; sha256="0wp9ma4c1nph6vximqizgmwvq29ijf5wkjda7yxc23hl51wig0gg"; depends=[CellNOptR nloptr]; };
  CNORode = derive2 { name="CNORode"; version="1.46.0"; sha256="0j66h000p02qnd8jrhdydggxiljynndfvjv9vlh844mb8n0dxx53"; depends=[CellNOptR genalg]; };
  CNTools = derive2 { name="CNTools"; version="1.60.0"; sha256="1m049jdb1vp5161q4zhcxwbzbzappdg02h80ar9ppwd10chf3bsm"; depends=[genefilter]; };
  CNVMetrics = derive2 { name="CNVMetrics"; version="1.8.0"; sha256="1vf04v7sr4f8mizzvbr3q4w83vdb62mabg5pl5dh53zvhrrzk1hi"; depends=[BiocParallel GenomicRanges gridExtra IRanges magrittr pheatmap rBeta2009 S4Vectors]; };
  CNVPanelizer = derive2 { name="CNVPanelizer"; version="1.36.0"; sha256="0gpi1psr14b572xn4qx92lfxwy6d7jdkarf67w7f3glvif93vm9k"; depends=[BiocGenerics foreach GenomeInfoDb GenomicRanges ggplot2 gplots IRanges NOISeq openxlsx plyr reshape2 Rsamtools S4Vectors shiny shinyFiles shinyjs stringr testthat]; };
  CNVRanger = derive2 { name="CNVRanger"; version="1.20.0"; sha256="1lwav9nv9rm7zyqxl9sx46vp4016i2175hvys3skj8myyjgcdd7n"; depends=[BiocGenerics BiocParallel data_table edgeR GDSArray gdsfmt GenomeInfoDb GenomicRanges IRanges lattice limma plyr qqman RaggedExperiment rappdirs reshape2 S4Vectors SNPRelate SummarizedExperiment]; };
  CNVfilteR = derive2 { name="CNVfilteR"; version="1.18.0"; sha256="1jqpdqcnyxww2h5x784yl3i07i3x5kf0xyqgv558rzs936gzc23a"; depends=[assertthat Biostrings CopyNumberPlots GenomeInfoDb GenomicRanges IRanges karyoploteR pracma regioneR Rsamtools SummarizedExperiment VariantAnnotation]; };
  CNViz = derive2 { name="CNViz"; version="1.12.0"; sha256="1s7j8lrl999b7v76z91y56m8nyy3lwjmqlnd1qpxg23jdlgb6bhv"; depends=[CopyNumberPlots dplyr DT GenomicRanges karyoploteR magrittr plotly scales shiny]; };
  CNVrd2 = derive2 { name="CNVrd2"; version="1.42.0"; sha256="1kbs82a7pri8xv3ci9xdi47ml7r70wjxi0jnsxhrzbaqjss5b4v6"; depends=[DNAcopy ggplot2 gridExtra IRanges rjags Rsamtools VariantAnnotation]; };
  COCOA = derive2 { name="COCOA"; version="2.18.0"; sha256="0achirgsp2psybk140wiiagjr9qsapkhdmy4mnf5zg4hc8nx3yn3"; depends=[Biobase BiocGenerics ComplexHeatmap data_table fitdistrplus GenomicRanges ggplot2 IRanges MIRA S4Vectors simpleCache tidyr]; };
  CODEX = derive2 { name="CODEX"; version="1.36.0"; sha256="0p3d7hqi14qclz4d7fhp3x4z2dnkwpzpzlgrwacj4njkw94cwdaz"; depends=[Biostrings BSgenome_Hsapiens_UCSC_hg19 GenomeInfoDb IRanges Rsamtools S4Vectors]; };
  COMPASS = derive2 { name="COMPASS"; version="1.42.0"; sha256="0xh3ysmcz4bjqcyqdv9wrmfgblj3k7g7i6wiw2m1vmx5gf98rfpa"; depends=[abind BiocStyle clue coda data_table dplyr foreach knitr magrittr pdist plyr RColorBrewer Rcpp reshape2 rlang rmarkdown scales tidyr]; };
  CONFESS = derive2 { name="CONFESS"; version="1.32.0"; sha256="14m7nz6ls58g4c45x5m7r30ms3kgxslg22jikjsi1cx49ycyk9dl"; depends=[changepoint cluster contrast data_table EBImage ecp flexmix flowClust flowCore flowMeans flowMerge flowPeaks foreach ggplot2 limma MASS moments outliers plotrix raster readbitmap reshape2 SamSPECTRAL waveslim wavethresh zoo]; };
  CONSTANd = derive2 { name="CONSTANd"; version="1.12.0"; sha256="17vfhh6w2sxnliv68wraf24z85dw369cs58nsrql6xgrm1wyp6h6"; depends=[]; };
  COSNet = derive2 { name="COSNet"; version="1.38.0"; sha256="0bb5lz4yqhhq2qjx7381877bwyrmh8286m9yq3fhyhzm4g6l4hfn"; depends=[]; };
  COTAN = derive2 { name="COTAN"; version="2.4.3"; sha256="13yw1mrx38im9g87is0ska6piw0ibzfmkk1h46alj1hxc0n3n5gh"; depends=[assertthat BiocSingular circlize ComplexHeatmap dendextend dplyr ggplot2 ggrepel ggthemes Matrix parallelDist parallelly PCAtools plyr RColorBrewer Rfast rlang scales Seurat stringr tibble tidyr umap withr zeallot]; };
  CRISPRball = derive2 { name="CRISPRball"; version="1.0.0"; sha256="1gxwmasr37azvc7h98izv0npxq5n7hvk1bvl2rgj5fv6da2ddmki"; depends=[circlize colourpicker ComplexHeatmap dittoSeq DT ggplot2 htmlwidgets InteractiveComplexHeatmap MAGeCKFlute matrixStats PCAtools plotly shiny shinyBS shinycssloaders shinyjqui shinyjs shinyWidgets]; };
  CRISPRseek = derive2 { name="CRISPRseek"; version="1.44.0"; sha256="1vmqwpbl1gplrr45bqs90np0cmrkqshw660k4sxmj9s9k0xdms7c"; depends=[BiocGenerics Biostrings BSgenome data_table DelayedArray dplyr GenomeInfoDb GenomicRanges hash IRanges keras mltools reticulate rhdf5 S4Vectors seqinr XVector]; };
  CRImage = derive2 { name="CRImage"; version="1.52.0"; sha256="0nnyzgdn25s2m9x4xglp12z2b4fai5sbfnx935qadk0b9gb62bdg"; depends=[aCGH DNAcopy e1071 EBImage foreach MASS sgeostat]; };
  CSAR = derive2 { name="CSAR"; version="1.56.0"; sha256="0gdzj5czyj2r7gf7fkliydy6w1cyl92lby071jfyihfz5hwh55yr"; depends=[GenomeInfoDb GenomicRanges IRanges S4Vectors]; };
  CSSQ = derive2 { name="CSSQ"; version="1.16.0"; sha256="1jwrp0b6qkkc538j1vshqgkazajs9q3fq3dda3cl9a8cbma9jpfg"; depends=[GenomicAlignments GenomicFeatures GenomicRanges ggplot2 IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment]; };
  CTDquerier = derive2 { name="CTDquerier"; version="2.12.0"; sha256="11z3gy6gn735dydjissdc09kllfd9qvg0gsf5v7a700fz6d78j2a"; depends=[BiocFileCache ggplot2 gridExtra igraph RCurl S4Vectors stringdist stringr]; };
  CTSV = derive2 { name="CTSV"; version="1.6.0"; sha256="1m7a0dqkpiwf234xags4fpg7s41bdhmsdd2ma375w49624wbwkyz"; depends=[BiocParallel knitr pscl qvalue SpatialExperiment SummarizedExperiment]; };
  CTdata = derive2 { name="CTdata"; version="1.4.0"; sha256="0hq3jfgb1sxzbs99m2r2xnymjz9dwaim3zpkn6icwgrfbgxil82l"; depends=[ExperimentHub]; };
  CTexploreR = derive2 { name="CTexploreR"; version="1.0.0"; sha256="0ld0hzd7vynwvks0bjggc3kfgdzb0jlsjxn1ggk68f2gxrqxv8i8"; depends=[BiocGenerics circlize ComplexHeatmap CTdata dplyr GenomicRanges ggplot2 ggrepel IRanges MatrixGenerics rlang SingleCellExperiment SummarizedExperiment tibble tidyr]; };
  CaDrA = derive2 { name="CaDrA"; version="1.2.0"; sha256="1m7ggdji6j64b6mz6ak2y8f8xyyi8l1gig5b13ksz7j6fgcbyx71"; depends=[doParallel ggplot2 gplots gtable MASS misc3d plyr ppcor R_cache reshape2 SummarizedExperiment]; };
  CaMutQC = derive2 { name="CaMutQC"; version="1.0.0"; sha256="1rri2730mpmz0nqb26kqfq950sgw0x97j8xk9vw09m7g89973zzs"; depends=[clusterProfiler data_table dplyr DT ggplot2 maftools MesKit org_Hs_eg_db stringr tidyr vcfR]; };
  Cardinal = derive2 { name="Cardinal"; version="3.6.2"; sha256="038dlgr4p1x42hb5xrz8apvdi4d18si2vr3r8g3i4aiyvpc2rfwj"; depends=[Biobase BiocGenerics BiocParallel CardinalIO EBImage irlba Matrix matter nlme ProtGenerics S4Vectors]; };
  CardinalIO = derive2 { name="CardinalIO"; version="1.2.1"; sha256="1kzqz2zba8i5z1pkwwi0hzb6fm7xh22bymkk1jwicyrk94fzfw1l"; depends=[matter ontologyIndex S4Vectors]; };
  Category = derive2 { name="Category"; version="2.70.0"; sha256="0paz6h8rsbqvlxxj4di8cl76aybgjr842z5gdv8xi6c2d7zwbclw"; depends=[annotate AnnotationDbi Biobase BiocGenerics DBI genefilter graph GSEABase Matrix RBGL]; };
  CausalR = derive2 { name="CausalR"; version="1.36.0"; sha256="0rf37qjl80wczgmb8lbnvzyq10v1fkqdgll24cg4b3vfhsscw0fl"; depends=[igraph]; };
  CeTF = derive2 { name="CeTF"; version="1.16.0"; sha256="0vpy0ns19wnq9pqhkc1dlx2b0y9rjxznq61z242p53gvh05zmzxi"; depends=[circlize clusterProfiler ComplexHeatmap DESeq2 dplyr GenomicTools_fileHandler GGally ggnetwork ggplot2 ggpubr ggrepel igraph Matrix network Rcpp RcppArmadillo RCy3 S4Vectors SummarizedExperiment]; };
  CellBarcode = derive2 { name="CellBarcode"; version="1.10.0"; sha256="006mlhzw5pwdr335q27f05jwwwra8fs563qph7ghlr8s7ws55q9g"; depends=[BH Biostrings Ckmeans_1d_dp data_table egg ggplot2 magrittr plyr Rcpp Rsamtools S4Vectors seqinr ShortRead stringr zlibbioc]; };
  CellBench = derive2 { name="CellBench"; version="1.20.0"; sha256="0azswhd2r9yf2qlz31105kk911iaxfxd2b4drvdq2f57asqw6mwm"; depends=[assertthat BiocFileCache BiocGenerics BiocParallel dplyr glue lubridate magrittr memoise purrr rappdirs rlang SingleCellExperiment tibble tidyr tidyselect]; };
  CellMapper = derive2 { name="CellMapper"; version="1.30.0"; sha256="058f2ik0v7fw7cbk5fhc90zifg2dzc8bmrv0kdd2rshvxfjp48xv"; depends=[S4Vectors]; };
  CellMixS = derive2 { name="CellMixS"; version="1.20.0"; sha256="16l2kw8rbnhn4qyz6sg1pnjfc6cjc12lsx5qzyysnpbpmgm7yqrv"; depends=[BiocGenerics BiocNeighbors BiocParallel cowplot dplyr ggplot2 ggridges kSamples magrittr purrr scater SingleCellExperiment SummarizedExperiment tidyr viridis]; };
  CellNOptR = derive2 { name="CellNOptR"; version="1.50.0"; sha256="0b6q0xrhyqnpzwkwsdywv008axhikmagpx11z85vik1mml12nhs7"; depends=[ggplot2 graph igraph RBGL RCurl Rgraphviz rmarkdown stringi stringr XML]; };
  CellScore = derive2 { name="CellScore"; version="1.24.0"; sha256="17aspmnfs4asixn6cc12k0q4an70642cgx0wy650aqhhkqjlyq88"; depends=[Biobase gplots lsa RColorBrewer squash SummarizedExperiment]; };
  CellTrails = derive2 { name="CellTrails"; version="1.22.0"; sha256="0pqazyf5da9zw95gpmhlj9mbhvv78c0rl6cncy3pij293xcy02l4"; depends=[Biobase BiocGenerics cba dendextend dtw EnvStats ggplot2 ggrepel igraph maptree mgcv reshape2 Rtsne SingleCellExperiment SummarizedExperiment]; };
  CelliD = derive2 { name="CelliD"; version="1.12.0"; sha256="0c7hls5qasjd5ahrqxp2mpd402jc12pi0pgy7spcbp1fkqm8qvbl"; depends=[BiocParallel data_table fastmatch fgsea ggplot2 glue irlba Matrix matrixStats pbapply Rcpp RcppArmadillo reticulate Rtsne scater Seurat SingleCellExperiment stringr SummarizedExperiment tictoc umap]; };
  CexoR = derive2 { name="CexoR"; version="1.42.0"; sha256="09376wzlknf8nlq81rrbbfsbbgd4mi5aagry51nykw5vc0870vdn"; depends=[genomation GenomeInfoDb GenomicRanges idr IRanges RColorBrewer Rsamtools rtracklayer S4Vectors]; };
  ChAMP = derive2 { name="ChAMP"; version="2.34.0"; sha256="06q539yhbmbp7qr71cwjai2vdw5nnhhjdv2ajlqmlyjpg04arc7v"; depends=[bumphunter ChAMPdata combinat dendextend DMRcate DNAcopy doParallel DT GenomicRanges ggplot2 globaltest goseq Hmisc Illumina450ProbeVariants_db IlluminaHumanMethylation450kmanifest IlluminaHumanMethylationEPICanno_ilm10b4_hg19 IlluminaHumanMethylationEPICmanifest illuminaio impute isva kpmt limma marray matrixStats minfi missMethyl plotly plyr preprocessCore prettydoc quadprog qvalue RColorBrewer rmarkdown RPMM shiny shinythemes sva wateRmelon]; };
  ChIPComp = derive2 { name="ChIPComp"; version="1.34.0"; sha256="013lmgdkj596gqzm0nlxjqpv0w94hap9vndp5znqpk4inq88gj8m"; depends=[BiocGenerics BSgenome_Hsapiens_UCSC_hg19 BSgenome_Mmusculus_UCSC_mm9 GenomeInfoDb GenomicRanges IRanges limma Rsamtools rtracklayer S4Vectors]; };
  ChIPQC = derive2 { name="ChIPQC"; version="1.40.0"; sha256="0lnk5lchwjnrr03x2r6lwgrja42n0rhfp5w9sya2y69da47bcks4"; depends=[Biobase BiocGenerics BiocParallel chipseq DiffBind GenomicAlignments GenomicFeatures GenomicRanges ggplot2 gtools IRanges Nozzle_R1 reshape2 Rsamtools S4Vectors TxDb_Celegans_UCSC_ce6_ensGene TxDb_Dmelanogaster_UCSC_dm3_ensGene TxDb_Hsapiens_UCSC_hg18_knownGene TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Mmusculus_UCSC_mm10_knownGene TxDb_Mmusculus_UCSC_mm9_knownGene TxDb_Rnorvegicus_UCSC_rn4_ensGene]; };
  ChIPXpress = derive2 { name="ChIPXpress"; version="1.48.0"; sha256="09lkm6s98ip9pw9cwdx8a0z816krr4cgzrcrd7b3d4v4bcywsy7z"; depends=[affy biganalytics bigmemory Biobase ChIPXpressData frma GEOquery]; };
  ChIPanalyser = derive2 { name="ChIPanalyser"; version="1.26.0"; sha256="0jxsy6xd4cr3w5zjjxkziiqpzhg8fld0fh4c3rr34823646ly9ja"; depends=[BiocManager Biostrings BSgenome GenomeInfoDb GenomicRanges IRanges RColorBrewer RcppRoll ROCR rtracklayer S4Vectors]; };
  ChIPexoQual = derive2 { name="ChIPexoQual"; version="1.28.0"; sha256="0y39fpbnykqf5ycpi9q3rw73dkn2ksll7n6nafimxvxsh463d8ky"; depends=[BiocParallel biovizBase broom data_table dplyr GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 hexbin IRanges RColorBrewer rmarkdown Rsamtools S4Vectors scales viridis]; };
  ChIPpeakAnno = derive2 { name="ChIPpeakAnno"; version="3.38.0"; sha256="1g7p53g91xx3x10kad2f190bmg10ryp928m0q5wxz9n8lycb5rgl"; depends=[AnnotationDbi BiocGenerics biomaRt Biostrings data_table DBI dplyr ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 graph InteractionSet IRanges KEGGREST matrixStats multtest pwalign RBGL regioneR Rsamtools rtracklayer S4Vectors scales stringr SummarizedExperiment tibble tidyr universalmotif VennDiagram]; };
  ChIPseeker = derive2 { name="ChIPseeker"; version="1.40.0"; sha256="00iknjk7vgj48vj1pp7l98g7nvc3x495z3jcq5nbvdiff02faj1f"; depends=[AnnotationDbi aplot BiocGenerics boot dplyr enrichplot GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 gplots gtools IRanges magrittr plotrix rtracklayer S4Vectors tibble TxDb_Hsapiens_UCSC_hg19_knownGene yulab_utils]; };
  ChIPseqR = derive2 { name="ChIPseqR"; version="1.58.0"; sha256="1lgwy6qprrvx1yv04vx567kr5b6mwz46kwafsqldwgqr2by45kgm"; depends=[BiocGenerics Biostrings fBasics GenomicRanges HilbertVis IRanges S4Vectors ShortRead timsac]; };
  ChIPsim = derive2 { name="ChIPsim"; version="1.58.0"; sha256="1cwn6khf8z3ijyjgz0sih24la4fw54ynw9vy0z2hi17vnp4136qi"; depends=[Biostrings IRanges ShortRead XVector]; };
  ChemmineOB = derive2 { name="ChemmineOB"; version="1.42.0"; sha256="17yvmdg16pb1dmx160n6vcgw3sa1yf40f8yzivdyic3sckn4z4bw"; depends=[BH BiocGenerics Rcpp zlibbioc]; };
  ChemmineR = derive2 { name="ChemmineR"; version="3.56.0"; sha256="1252xy33bgjrd4gh4shrgzklgxry2lf67svzxjra5yckf8am0rdc"; depends=[base64enc BH BiocGenerics DBI digest DT ggplot2 gridExtra jsonlite png Rcpp RCurl rjson rsvg stringi]; };
  Chicago = derive2 { name="Chicago"; version="1.32.0"; sha256="05djywxsyfxb26d0clx51q7wmsw3rq56va444d6iy5n7xlhj9m94"; depends=[data_table Delaporte Hmisc MASS matrixStats]; };
  ChromHeatMap = derive2 { name="ChromHeatMap"; version="1.58.0"; sha256="1kzrx26rj7wfki6l5g1426p30fch6b92x0y06rg17i3psbmmkmqg"; depends=[annotate AnnotationDbi Biobase BiocGenerics GenomicRanges IRanges rtracklayer]; };
  ChromSCape = derive2 { name="ChromSCape"; version="1.14.0"; sha256="12chaigwnqm765p0qlf00s94kkg3dphj2cbqv3vfsyya54hbhfzr"; depends=[batchelor BiocParallel colorRamps colourpicker ConsensusClusterPlus coop DelayedArray dplyr DT edgeR forcats fs GenomicRanges gggenes ggplot2 ggrepel gridExtra IRanges irlba jsonlite kableExtra Matrix matrixTests msigdbr plotly qs qualV Rcpp rlist Rsamtools rtracklayer Rtsne S4Vectors scater scran shiny shinycssloaders shinydashboard shinydashboardPlus shinyFiles shinyhelper shinyjs shinyWidgets SingleCellExperiment stringdist stringr SummarizedExperiment tibble tidyr umap viridis]; };
  CircSeqAlignTk = derive2 { name="CircSeqAlignTk"; version="1.6.0"; sha256="1i9izbf9mzlc7sl2zi5gj4dhxa6mq9kkyysxdq9cj4myhrp9hgwz"; depends=[BiocGenerics Biostrings dplyr ggplot2 htmltools IRanges magrittr plotly R_utils Rbowtie2 Rhisat2 rlang Rsamtools S4Vectors shiny shinyFiles shinyjs ShortRead tidyr]; };
  CiteFuse = derive2 { name="CiteFuse"; version="1.16.0"; sha256="1vxynidr7p0khq54d08vzzh2ijaxx1ghm7pxnpg7zppfxvlmsh35"; depends=[compositions cowplot dbscan ggplot2 ggraph ggridges gridExtra igraph Matrix mixtools pheatmap randomForest Rcpp reshape2 rhdf5 rlang Rtsne S4Vectors scales scran SingleCellExperiment SummarizedExperiment uwot]; };
  ClassifyR = derive2 { name="ClassifyR"; version="3.8.2"; sha256="1p78lxcannrfif2029pksc1minzf4jp0p4r79b7rz06p3nq54wav"; depends=[BiocParallel dplyr genefilter generics ggplot2 ggpubr ggupset MultiAssayExperiment ranger reshape2 rlang S4Vectors survival tidyr]; };
  Clomial = derive2 { name="Clomial"; version="1.40.0"; sha256="17n0s9ppjfcvzb6fyyny61r1hdh4vyf6nf1yjd01vnw8wzyy01f6"; depends=[matrixStats permute]; };
  CluMSID = derive2 { name="CluMSID"; version="1.20.0"; sha256="02y79fhzx2hzwj8sjafywm7zqqar48b1m156ld60jjvskrv8ywqf"; depends=[ape Biobase dbscan GGally ggplot2 gplots MSnbase mzR network plotly RColorBrewer S4Vectors sna]; };
  ClustAll = derive2 { name="ClustAll"; version="1.0.0"; sha256="13qg0r6lqvzyggkf8gjyxh8d871f483fcrhgbhr4xwpfpwssv8k8"; depends=[bigstatsr circlize cluster clValid ComplexHeatmap doSNOW dplyr FactoMineR flock foreach fpc ggplot2 mice modeest networkD3 pbapply RColorBrewer]; };
  ClustIRR = derive2 { name="ClustIRR"; version="1.2.0"; sha256="1vp3yj16c8irifcvsn0ibvvz8kzbmsf81112cx1c7x6kj132hprx"; depends=[blaster igraph pwalign stringdist visNetwork]; };
  ClusterFoldSimilarity = derive2 { name="ClusterFoldSimilarity"; version="1.0.0"; sha256="136bh473b8fznxlrszvxr4w0q6y2cxhhm0xd43fka5wq130x3nr9"; depends=[BiocParallel cowplot dplyr ggdendro ggplot2 igraph Matrix reshape2 scales Seurat SeuratObject SingleCellExperiment]; };
  ClusterJudge = derive2 { name="ClusterJudge"; version="1.26.0"; sha256="012n1g47jri9d7cwxwli34xrd5qnv1ghps79l2xin3pbq5fr5h03"; depends=[httr infotheo jsonlite lattice latticeExtra]; };
  ClusterSignificance = derive2 { name="ClusterSignificance"; version="1.32.0"; sha256="0n12085247f51n8sp7fic7il73h9k25fkc8sj7wr7nmi81j497ah"; depends=[pracma princurve RColorBrewer scatterplot3d]; };
  CoCiteStats = derive2 { name="CoCiteStats"; version="1.76.0"; sha256="0v3b39nc53c6gzi4ghp5n64jzcx5gv11s8ayaq6f3426732cc2kx"; depends=[AnnotationDbi org_Hs_eg_db]; };
  CoGAPS = derive2 { name="CoGAPS"; version="3.24.0"; sha256="1yq625qb5hb0j5jf0r6sxyhwm1zlycv4dkfr3kv2hkapfshirk2b"; depends=[BH BiocParallel cluster dplyr fgsea forcats ggplot2 gplots RColorBrewer Rcpp rhdf5 S4Vectors SingleCellExperiment SummarizedExperiment]; };
  Cogito = derive2 { name="Cogito"; version="1.10.0"; sha256="1xin0jxc38qzdh6jfq4pkydsxbyf36pl5b4vipgw145nvll537vr"; depends=[AnnotationDbi BiocManager entropy GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 jsonlite magrittr rmarkdown S4Vectors TxDb_Mmusculus_UCSC_mm9_knownGene]; };
  ComPrAn = derive2 { name="ComPrAn"; version="1.12.0"; sha256="0nj1h3chqc1pspaj2r5ccxswdfz8zmwaqa1v3nmav54z5l5s70iv"; depends=[data_table dplyr DT forcats ggplot2 magrittr purrr RColorBrewer rio rlang scales shiny shinydashboard shinyjs stringr tibble tidyr VennDiagram]; };
  ComplexHeatmap = derive2 { name="ComplexHeatmap"; version="2.20.0"; sha256="1ppzx850nvvdhz2xiggr43c79w0nr0vmsmmnszasd4flf3jm7v8v"; depends=[circlize clue codetools colorspace digest doParallel foreach GetoptLong GlobalOptions IRanges matrixStats png RColorBrewer]; };
  CompoundDb = derive2 { name="CompoundDb"; version="1.8.0"; sha256="10rg8419ng2zmgn7ydlywxsfqdz8m15rs5wmsicfngagd2nwp5mf"; depends=[AnnotationFilter Biobase BiocGenerics BiocParallel ChemmineR DBI dbplyr dplyr IRanges jsonlite MetaboCoreUtils MsCoreUtils ProtGenerics RSQLite S4Vectors Spectra tibble xml2]; };
  ConsensusClusterPlus = derive2 { name="ConsensusClusterPlus"; version="1.68.0"; sha256="0y91kz1n3byadk505432cnlj9dfiw521fgb460d6dmly9s0d9yif"; depends=[ALL Biobase cluster]; };
  CopyNumberPlots = derive2 { name="CopyNumberPlots"; version="1.20.0"; sha256="1b3yschvrwsaj5szrnwbwrxswfxvalfs495q26g1r7w6l26qjv5b"; depends=[cn_mops GenomeInfoDb GenomicRanges IRanges karyoploteR regioneR rhdf5 Rsamtools SummarizedExperiment VariantAnnotation]; };
  CoreGx = derive2 { name="CoreGx"; version="2.8.0"; sha256="05fyncpqiq08a169rjwyc117wkyckh714z0is2r0g79920i36jas"; depends=[bench Biobase BiocGenerics BiocParallel BumpyMatrix checkmate crayon data_table glue lsa MatrixGenerics MultiAssayExperiment piano rlang S4Vectors SummarizedExperiment]; };
  Cormotif = derive2 { name="Cormotif"; version="1.50.0"; sha256="0lg52ixswgd7fa9z47sdm1ka49xyllgn04nz21bmv1488abpfm9d"; depends=[affy limma]; };
  CoverageView = derive2 { name="CoverageView"; version="1.42.0"; sha256="1wgkn2adcxl6js3cvawhvzpxm3nmnnc16wbnzkrnsnd9l12aasih"; depends=[GenomicAlignments GenomicRanges IRanges Rsamtools rtracklayer S4Vectors]; };
  CrispRVariants = derive2 { name="CrispRVariants"; version="1.32.0"; sha256="1nlmznpypfabzrn430hs4k3b8zbw6n1brfy1x2j00bnq3sdd7zgc"; depends=[AnnotationDbi BiocParallel Biostrings GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gridExtra IRanges reshape2 Rsamtools S4Vectors]; };
  CuratedAtlasQueryR = derive2 { name="CuratedAtlasQueryR"; version="1.2.0"; sha256="0b0p4q4nsn1bxxyz61gh9r9bqkwkmjybqrv1ij565kbjnwimbcxj"; depends=[assertthat BiocGenerics cli DBI dbplyr dplyr duckdb glue HDF5Array httr purrr rlang S4Vectors Seurat SeuratObject SingleCellExperiment stringr SummarizedExperiment tibble]; };
  CyTOFpower = derive2 { name="CyTOFpower"; version="1.10.0"; sha256="158ixl91yfhzik2d22xijarllirbxg33783i5pxixcdz3amp1z56"; depends=[CytoGLMM diffcyt dplyr DT ggplot2 magrittr rlang shiny shinyFeedback shinyjs shinyMatrix SummarizedExperiment tibble tidyr]; };
  CytoDx = derive2 { name="CytoDx"; version="1.24.0"; sha256="0lj5j7dzsd643mi0056gbrdbajcmy40bwy4rcicq75lvjc3cxlpd"; depends=[doParallel dplyr flowCore glmnet rpart rpart_plot]; };
  CytoGLMM = derive2 { name="CytoGLMM"; version="1.12.0"; sha256="1dfrp97mx93fdx4mrd4p8w2v37hq9h5b829l75vxxpmx2xqv4c7a"; depends=[BiocParallel caret cowplot doParallel dplyr factoextra flexmix ggplot2 ggrepel logging magrittr MASS Matrix mbest pheatmap RColorBrewer rlang stringr strucchange tibble tidyr]; };
  CytoMDS = derive2 { name="CytoMDS"; version="1.0.0"; sha256="050zzhhiy8gckism9s20l1kb1mhfgkd9prci0aqg23fzlv6d6inm"; depends=[BiocParallel CytoPipeline flowCore ggforce ggplot2 ggrepel patchwork pracma reshape2 rlang smacof transport withr]; };
  CytoML = derive2 { name="CytoML"; version="2.16.0"; sha256="11kflx3yahl7xjl6x2rgpd4hl5y69qgarzhalmz4qdci7b7ln7kr"; depends=[BH Biobase cpp11 cytolib data_table dplyr flowCore flowWorkspace ggcyto graph jsonlite openCyto RBGL Rgraphviz Rhdf5lib RProtoBufLib tibble XML yaml]; };
  CytoPipeline = derive2 { name="CytoPipeline"; version="1.4.0"; sha256="1c8w2v8990z8kp7wxc69ildhj0v5g3zx05dzyhb16nrlnb7bfcc4"; depends=[BiocFileCache BiocParallel diagram flowAI flowCore ggcyto ggplot2 jsonlite PeacoQC rlang scales withr]; };
  CytoPipelineGUI = derive2 { name="CytoPipelineGUI"; version="1.2.0"; sha256="1xr7c8gcccxz8zl74amh35r2va3g58c2lwvl1j9py5g8ipmwprzj"; depends=[CytoPipeline flowCore ggplot2 plotly shiny]; };
  DAMEfinder = derive2 { name="DAMEfinder"; version="1.16.0"; sha256="1ffqa7a3a0f3m58j6al2hd7aa8bamv4z170y4yn1vr1f8jrb7kq5"; depends=[BiocGenerics Biostrings bumphunter cowplot GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges limma plyr readr reshape2 Rsamtools S4Vectors stringr SummarizedExperiment VariantAnnotation]; };
  DAPAR = derive2 { name="DAPAR"; version="1.36.2"; sha256="1800c6g39gg9q43v1s5r13qm4aj53x18qzbbyz75fpwrril967gr"; depends=[Biobase DAPARdata foreach highcharter MSnbase]; };
  DART = derive2 { name="DART"; version="1.52.0"; sha256="1zqzcssiibb9cl1iv6rzfmwlcms2llina41j5lkx0i9s8xmrqi06"; depends=[igraph]; };
  DCATS = derive2 { name="DCATS"; version="1.2.0"; sha256="1hf275h40d5ggya58malxbrmzqi5gi04w847gc567qzpzs1bqfp2"; depends=[aod e1071 matrixStats MCMCpack robustbase]; };
  DECIPHER = derive2 { name="DECIPHER"; version="3.0.0"; sha256="1bgzl3sy4l5xfgxrkw8z1dvygkn2dgcl2fl9ah13ggs8hc9h9nlm"; depends=[Biostrings DBI IRanges S4Vectors XVector]; };
  DEFormats = derive2 { name="DEFormats"; version="1.32.0"; sha256="0sxflb9b148gkylxpfmmk9pmh3gblc4wp6594n0w4a711xrv1jr9"; depends=[checkmate data_table DESeq2 edgeR GenomicRanges S4Vectors SummarizedExperiment]; };
  DEGraph = derive2 { name="DEGraph"; version="1.56.0"; sha256="0pxh6kyi4blz039yw7vzi9dj4jpzsbv0p2fw44fz2q2pzr98g2m9"; depends=[graph KEGGgraph lattice mvtnorm NCIgraph R_methodsS3 R_utils RBGL Rgraphviz rrcov]; };
  DEGreport = derive2 { name="DEGreport"; version="1.40.0"; sha256="087c7x3vz8z3yz4jdwbcskdqmv3kgz4c4vi3r9gvvay5z36yhpl5"; depends=[Biobase BiocGenerics broom circlize cluster ComplexHeatmap ConsensusClusterPlus cowplot dendextend DESeq2 dplyr edgeR ggdendro ggplot2 ggrepel knitr logging magrittr psych RColorBrewer reshape rlang S4Vectors scales stringi stringr SummarizedExperiment tibble tidyr]; };
  DEGseq = derive2 { name="DEGseq"; version="1.58.0"; sha256="1ia2fkd1v0f8mlfrpdv3h0n34y5pg1s8xqf1w5rcmh2md4icm670"; depends=[qvalue]; };
  DELocal = derive2 { name="DELocal"; version="1.4.0"; sha256="0xxlf90h1zi97k5rsbv41l88yq7qgfmd1rrmyipfjzhbl3l2spaf"; depends=[DESeq2 dplyr ggplot2 limma matrixStats reshape2 SummarizedExperiment]; };
  DEP = derive2 { name="DEP"; version="1.26.0"; sha256="1z8ymvghbbr9igcdzqwaz62r8lk07c2b1gnjbk504cxrhyy301jx"; depends=[assertthat circlize cluster ComplexHeatmap dplyr DT fdrtool ggplot2 ggrepel gridExtra imputeLCMD limma MSnbase purrr RColorBrewer readr rmarkdown shiny shinydashboard SummarizedExperiment tibble tidyr vsn]; };
  DEScan2 = derive2 { name="DEScan2"; version="1.24.0"; sha256="15ncl95mf7mxazic0ig15isnblyj59dcr2xjv05dcwxc11wz1fr0"; depends=[BiocGenerics BiocParallel ChIPpeakAnno data_table DelayedArray GenomeInfoDb GenomicAlignments GenomicRanges glue IRanges plyr Rcpp RcppArmadillo rtracklayer S4Vectors SummarizedExperiment]; };
  DESeq2 = derive2 { name="DESeq2"; version="1.44.0"; sha256="1j7ivkxbc75hzxhl9d97w8vamrmxf6527n7841i1j9n6s7hz1cdn"; depends=[Biobase BiocGenerics BiocParallel GenomicRanges ggplot2 IRanges locfit MatrixGenerics matrixStats Rcpp RcppArmadillo S4Vectors SummarizedExperiment]; };
  DESpace = derive2 { name="DESpace"; version="1.4.0"; sha256="0lx3igbclpxx6jjvsagwjdakg9iy325xhkw7iixj8m6b8s4dkmkp"; depends=[assertthat BiocGenerics BiocParallel cowplot data_table dplyr edgeR ggforce ggnewscale ggplot2 ggpubr limma Matrix patchwork S4Vectors scales SpatialExperiment SummarizedExperiment]; };
  DEWSeq = derive2 { name="DEWSeq"; version="1.18.0"; sha256="034p1rxc1w758zpy920sgpcfr0dmhkfqrcximqkary0n0m6n95i0"; depends=[BiocGenerics BiocParallel data_table DESeq2 GenomeInfoDb GenomicRanges R_utils S4Vectors SummarizedExperiment]; };
  DEXSeq = derive2 { name="DEXSeq"; version="1.50.0"; sha256="13y3fhgvf7438yjv6qm28n8f42w4wgkklc0q229ypns1gfh54524"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel biomaRt DESeq2 genefilter geneplotter GenomicRanges hwriter IRanges RColorBrewer Rsamtools S4Vectors statmod stringr SummarizedExperiment]; };
  DEqMS = derive2 { name="DEqMS"; version="1.22.0"; sha256="0fiiyrzvy6nkk8xpxdjmar0fpjs9ardzplb993xxyi1n8vv0092l"; depends=[ggplot2 limma matrixStats]; };
  DEsingle = derive2 { name="DEsingle"; version="1.24.0"; sha256="06bnvyivj4bx5l2zvwjj4za2hpshsifsa83lsi9fpgdwhn3526kd"; depends=[bbmle BiocParallel gamlss MASS Matrix maxLik pscl VGAM]; };
  DEsubs = derive2 { name="DEsubs"; version="1.30.0"; sha256="0p3vkm6116zl157nivwnm68svwm9h9cp9cplz9hncfywcii9a579"; depends=[circlize DESeq2 EBSeq edgeR ggplot2 graph igraph jsonlite limma locfit Matrix NBPSeq pheatmap RBGL]; };
  DExMA = derive2 { name="DExMA"; version="1.12.0"; sha256="1mm45hvb3l1xvikgy25jxg9ppl71ha2sn4vh9qpf7wfr770hif3r"; depends=[Biobase bnstruct DExMAdata GEOquery impute limma pheatmap plyr RColorBrewer scales snpStats sva swamp]; };
  DFP = derive2 { name="DFP"; version="1.62.0"; sha256="1rjc8a03pga0hyb663lnfkwrwfw3pipwsb11gn2aj3vx4wyf1gp1"; depends=[Biobase]; };
  DIAlignR = derive2 { name="DIAlignR"; version="2.12.0"; sha256="19zgjnd9sjxx09pcf50fl3w4fmd1gj8g765x114l0cqcpk9qfmm5"; depends=[ape bit64 data_table DBI dplyr ggplot2 magrittr mzR phangorn pracma Rcpp RcppEigen reticulate rlang RMSNumpress RSQLite signal tidyr zoo]; };
  DMCFB = derive2 { name="DMCFB"; version="1.18.0"; sha256="0hpf7qkjy7hms4bpqb6y15gwkfah6p69icwab2vwsgmz8w94c44a"; depends=[arm benchmarkme BiocParallel data_table fastDummies GenomicRanges IRanges MASS matrixStats rtracklayer S4Vectors speedglm SummarizedExperiment tibble]; };
  DMCHMM = derive2 { name="DMCHMM"; version="1.26.0"; sha256="0rv1v08nf7vbxci28j68sjxq77lj0swis26ryxp156alr397jfby"; depends=[BiocParallel calibrate fdrtool GenomicRanges IRanges multcomp rtracklayer S4Vectors SummarizedExperiment]; };
  DMRScan = derive2 { name="DMRScan"; version="1.26.0"; sha256="0j68kxzmn3kskqy88j1dqznigiw1rb3b14hwnvcmyckmyhiysx73"; depends=[GenomeInfoDb GenomicRanges IRanges MASS Matrix mvtnorm RcppRoll]; };
  DMRcaller = derive2 { name="DMRcaller"; version="1.36.0"; sha256="0r9xm77y6xs4mginwfshnpvn2l8phpag35a8mcasj63aqs05js2h"; depends=[betareg GenomicRanges IRanges Rcpp RcppRoll S4Vectors]; };
  DMRcate = derive2 { name="DMRcate"; version="3.0.1"; sha256="091bj5dkcqci032x01cnzryjjy5cw6l4cci9mlll0bm2g4l4k7p5"; depends=[AnnotationHub biomaRt bsseq edgeR ExperimentHub GenomeInfoDb GenomicRanges Gviz IRanges limma minfi missMethyl plyr S4Vectors SummarizedExperiment]; };
  DNABarcodeCompatibility = derive2 { name="DNABarcodeCompatibility"; version="1.20.0"; sha256="0iiy81svi1nnghaimnc5hs1prrk1z5kgv1bd5naysb8fpagd0jgl"; depends=[DNABarcodes dplyr numbers purrr stringr tidyr]; };
  DNABarcodes = derive2 { name="DNABarcodes"; version="1.34.0"; sha256="0vxxg6fkgck640p9plk4vx3d05794s3xgxksv819d2wicvyby4hk"; depends=[BH Matrix Rcpp]; };
  DNAcopy = derive2 { name="DNAcopy"; version="1.78.0"; sha256="1q4s6rb6iv9cmfkjymgdyb4h3z0x0kzzd2bvfdjrzzzza6vhjpxl"; depends=[]; };
  DNAfusion = derive2 { name="DNAfusion"; version="1.6.0"; sha256="1rdm6x8dzk02ggx33bx9mgcq1p36ryysyxha333j05aysn2az2x0"; depends=[bamsignals BiocBaseUtils BiocGenerics GenomicAlignments GenomicFeatures GenomicRanges IRanges Rsamtools S4Vectors TxDb_Hsapiens_UCSC_hg38_knownGene]; };
  DNAshapeR = derive2 { name="DNAshapeR"; version="1.32.0"; sha256="0s5z3bh5dlym810rkb9i3bfxfap91qh7hj070i1nqnf4g2vamx9g"; depends=[Biostrings fields GenomicRanges Rcpp]; };
  DOSE = derive2 { name="DOSE"; version="3.30.1"; sha256="1kyrr1xxcif45ynyq4wsv2247bjily5sgzn17m1g3ypw2hkqcj53"; depends=[AnnotationDbi BiocParallel fgsea ggplot2 GOSemSim HDO_db qvalue reshape2 yulab_utils]; };
  DRIMSeq = derive2 { name="DRIMSeq"; version="1.32.0"; sha256="10skx3n3r9vp1p1499ddccgabi7q3cy1dpi5pbp4ap0gff5ika5x"; depends=[BiocGenerics BiocParallel edgeR GenomicRanges ggplot2 IRanges limma MASS reshape2 S4Vectors]; };
  DSS = derive2 { name="DSS"; version="2.52.0"; sha256="1y9xg6ic3a03xswyfvyxdhnd7ngkljc96bm5fry4ni6kpa77bkv8"; depends=[Biobase BiocParallel bsseq]; };
  DTA = derive2 { name="DTA"; version="2.50.0"; sha256="0njm0v10s31sx7v35kdv44815yy6k9h814s9zn98ld5qcrzn2q77"; depends=[LSD scatterplot3d]; };
  DaMiRseq = derive2 { name="DaMiRseq"; version="2.16.0"; sha256="029idkjbha250f8wgwy6sjnjvlxqs0lkwal066693mc2h40rql11"; depends=[arm caret corrplot DESeq2 e1071 EDASeq edgeR FactoMineR FSelector ggplot2 Hmisc ineq kknn limma lubridate MASS pheatmap pls plsVarSel plyr randomForest RColorBrewer reshape2 RSNNS SummarizedExperiment sva]; };
  Damsel = derive2 { name="Damsel"; version="1.0.0"; sha256="0n60wkrwk1npg1361x5plam6rabmqzlxdcij1qf5q351wfkqlp8y"; depends=[AnnotationDbi Biostrings dplyr edgeR GenomeInfoDb GenomicFeatures GenomicRanges ggbio ggplot2 goseq magrittr patchwork plyranges reshape2 rlang Rsamtools Rsubread stringr tidyr]; };
  DeMAND = derive2 { name="DeMAND"; version="1.34.0"; sha256="0pdqgb4fsqzwhan1hwb4hi326yh5xhxwqkdqlffzhgfkp4lwi1cb"; depends=[KernSmooth]; };
  DeMixT = derive2 { name="DeMixT"; version="1.20.0"; sha256="1hnaaidmflyh768pc1ivlq8rfjh5vrwycc0r6k1cyiinm53vknns"; depends=[base64enc dendextend DSS ggplot2 KernSmooth knitr matrixcalc matrixStats psych Rcpp rmarkdown SummarizedExperiment sva truncdist]; };
  DeProViR = derive2 { name="DeProViR"; version="1.0.0"; sha256="0m1nhzq5kl6jyi3d8fzb77iplzc4p85v7lj5q7i7125kjv6bycsm"; depends=[BiocFileCache caret data_table dplyr fmsb ggplot2 keras pROC PRROC readr]; };
  DeconRNASeq = derive2 { name="DeconRNASeq"; version="1.46.0"; sha256="0hwvfsc48dakh3nvz60i92yciz2m5my9w57kzpyj4jyk92cs181g"; depends=[ggplot2 limSolve pcaMethods]; };
  DeepPINCS = derive2 { name="DeepPINCS"; version="1.12.0"; sha256="148klzaqa01yns02x38vnd3gn46ayi7p0z2f2s7m95ralby95qm0"; depends=[CatEncoders keras matlab PRROC purrr rcdk reticulate stringdist tensorflow tokenizers ttgsea webchem]; };
  DegCre = derive2 { name="DegCre"; version="1.0.0"; sha256="1wv2h8x45qsj8p4awwb22z1ilymmkrgmrhsl2y7l7dx13qh5l3dr"; depends=[BiocGenerics GenomeInfoDb GenomicRanges InteractionSet IRanges plotgardener S4Vectors]; };
  DegNorm = derive2 { name="DegNorm"; version="1.14.0"; sha256="15bh4x6rnqil3gcwialcpnqq5inznmjhzf0f4r54xylril0ad268"; depends=[data_table doParallel foreach GenomicAlignments GenomicFeatures GenomicRanges ggplot2 heatmaply IRanges plotly plyr Rcpp RcppArmadillo Rsamtools S4Vectors txdbmaker viridis]; };
  DelayedArray = derive2 { name="DelayedArray"; version="0.30.1"; sha256="0n6pparz2fg8wgrgcwciibqz3iyrnlmk5hdvnzjppcraxanz8sm6"; depends=[BiocGenerics IRanges Matrix MatrixGenerics S4Arrays S4Vectors SparseArray]; };
  DelayedDataFrame = derive2 { name="DelayedDataFrame"; version="1.20.0"; sha256="1j9akl3njqnrf6klccgiiss941l1k49vsrsrhrqjbg8f5vzg5i9w"; depends=[BiocGenerics DelayedArray S4Vectors]; };
  DelayedMatrixStats = derive2 { name="DelayedMatrixStats"; version="1.26.0"; sha256="1cqf6y0f18469v1jgfvdjnskkc89i3sfg79axxqcwa33mfjj736s"; depends=[DelayedArray IRanges Matrix MatrixGenerics S4Vectors sparseMatrixStats]; };
  DelayedRandomArray = derive2 { name="DelayedRandomArray"; version="1.12.0"; sha256="0lzx0p9hq4vd6w1rvlqd98b3rvfs1zzgvqm21s99vlmdc3db5pqn"; depends=[BH DelayedArray dqrng Rcpp]; };
  DelayedTensor = derive2 { name="DelayedTensor"; version="1.10.0"; sha256="1f8qpi3xfhgng7zjm7zdxmd32ynri2mavxs6ffqg1izclrzqsb5q"; depends=[BiocSingular DelayedArray DelayedRandomArray einsum HDF5Array irlba Matrix rTensor]; };
  DepInfeR = derive2 { name="DepInfeR"; version="1.8.0"; sha256="0akyxyijjp4hwy1cs00nnahcnsbrp5j6gnrahwd2wrlx2dr0zxrm"; depends=[BiocParallel glmnet matrixStats]; };
  DepecheR = derive2 { name="DepecheR"; version="1.20.0"; sha256="15lpn1p2p28lhmzi7svszr0p1zkyaivi69q8pxcrv4lvips38hk4"; depends=[beanplot ClusterR collapse doSNOW dplyr FNN foreach ggplot2 gmodels gplots MASS matrixStats mixOmics moments Rcpp RcppEigen reshape2 robustbase viridis]; };
  DiffBind = derive2 { name="DiffBind"; version="3.14.0"; sha256="1sr0zy5pbjmjzkwkpjmr26k4dcf3f3kxsl7z2nqw0p0a14rh57pm"; depends=[amap apeglm ashr BiocParallel DESeq2 dplyr GenomicAlignments GenomicRanges ggplot2 ggrepel gplots GreyListChIP IRanges lattice limma locfit RColorBrewer Rcpp Rhtslib Rsamtools S4Vectors SummarizedExperiment systemPipeR]; };
  DiffLogo = derive2 { name="DiffLogo"; version="2.28.0"; sha256="00c75krimzaf8z35dyr9dq7vrh06ihb8fikyd61kybaakz6c4waj"; depends=[cba]; };
  DifferentialRegulation = derive2 { name="DifferentialRegulation"; version="2.2.0"; sha256="105jwyiqz3z12q4vmrsmw5d8j8w0s5prfa0l8z68jj36g8rxbl21"; depends=[BANDITS data_table doParallel doRNG foreach ggplot2 gridExtra MASS Matrix Rcpp RcppArmadillo SingleCellExperiment SummarizedExperiment tximport]; };
  Dino = derive2 { name="Dino"; version="1.10.0"; sha256="0nfn61i6iczg3k8brfajddlxavskjzm0x56qliy81f76sjb3njr3"; depends=[BiocParallel BiocSingular Matrix matrixStats S4Vectors scran Seurat SingleCellExperiment SummarizedExperiment]; };
  Director = derive2 { name="Director"; version="1.30.0"; sha256="1lm6qdmk1a4c74sph9n4vj174x9c41489ljrw7hxwrwifpjp4phd"; depends=[htmltools]; };
  DirichletMultinomial = derive2 { name="DirichletMultinomial"; version="1.46.0"; sha256="0djd84vnf4skjr6m25ykqrvwa37lgs5r5aw9md81ykaqmi40szqb"; depends=[BiocGenerics IRanges S4Vectors]; };
  DiscoRhythm = derive2 { name="DiscoRhythm"; version="1.20.0"; sha256="14scrzsx36j6rbnav5hn8xykhwyswr85kkvdvg66g4xdwc3d6v7b"; depends=[BiocGenerics BiocStyle broom data_table dplyr DT ggExtra ggplot2 gridExtra heatmaply kableExtra knitr magick matrixStats matrixTests MetaCycle plotly reshape2 rmarkdown S4Vectors shiny shinyBS shinycssloaders shinydashboard shinyjs SummarizedExperiment UpSetR VennDiagram viridis zip]; };
  DominoEffect = derive2 { name="DominoEffect"; version="1.24.0"; sha256="1lwvji698xi63rx4i3g73xkv4k53m3gbjgkbcmxgm0gagn1mrczl"; depends=[AnnotationDbi biomaRt Biostrings data_table GenomeInfoDb GenomicRanges IRanges pwalign SummarizedExperiment VariantAnnotation]; };
  Doscheda = derive2 { name="Doscheda"; version="1.26.0"; sha256="0iqcsyk4y8wkhf9s84hzm4rdmyg7bb5db7frm6xbxlsydfpzqy3l"; depends=[affy calibrate corrgram drc DT ggplot2 gridExtra httr jsonlite limma matrixStats prodlim readxl reshape2 shiny shinydashboard stringr vsn]; };
  DriverNet = derive2 { name="DriverNet"; version="1.44.0"; sha256="0jj9vrbni8zc56pbs2c7nv6yks23nrwzqz757vb7a8lxcd3sziwr"; depends=[]; };
  DropletUtils = derive2 { name="DropletUtils"; version="1.24.0"; sha256="01y88cnii02sn1jgyvvmbx8j60qbzqyznqfxzv06yi4y0xj37klg"; depends=[beachmat BH BiocGenerics BiocParallel DelayedArray DelayedMatrixStats dqrng edgeR GenomicRanges HDF5Array IRanges Matrix R_utils Rcpp rhdf5 Rhdf5lib S4Vectors scuttle SingleCellExperiment SummarizedExperiment]; };
  DrugVsDisease = derive2 { name="DrugVsDisease"; version="2.46.0"; sha256="1bzjjvv94hiyh7m0iqrvgl6lgxzz6s8jy5ry1mj2w821ivhz1gpy"; depends=[affy annotate ArrayExpress BiocGenerics biomaRt cMap2data DrugVsDiseasedata GEOquery hgu133a_db hgu133a2_db hgu133plus2_db limma qvalue RUnit xtable]; };
  Dune = derive2 { name="Dune"; version="1.16.0"; sha256="0fiqbh9ywip75sxy54y76nbbqg6maji40d189qxarckdlmj09m7z"; depends=[aricode BiocParallel dplyr gganimate ggplot2 magrittr purrr RColorBrewer SummarizedExperiment tidyr]; };
  DynDoc = derive2 { name="DynDoc"; version="1.82.0"; sha256="174jfdyq7g7mvn7wvmdkf36n0n969aqsg9bwd1nk6a5nw1khm7js"; depends=[]; };
  EBImage = derive2 { name="EBImage"; version="4.46.0"; sha256="0qaafn9l9lwrj0yph74g39pghjpg009qz7by64frxg1q0j7ksd2w"; depends=[abind BiocGenerics fftwtools htmltools htmlwidgets jpeg locfit png RCurl tiff]; };
  EBSEA = derive2 { name="EBSEA"; version="1.32.0"; sha256="1pms8d49pcr4ngcy79m556vh4h2xbscwkzcabvy5xr8l22biv84b"; depends=[DESeq2 EmpiricalBrownsMethod]; };
  EBSeq = derive2 { name="EBSeq"; version="2.2.0"; sha256="1lbvrw6fcjhrm6v71lmnphv4hbdh03czgx3822ckdk6xrvyh54cf"; depends=[BH blockmodeling gplots Rcpp RcppEigen testthat]; };
  EBarrays = derive2 { name="EBarrays"; version="2.68.0"; sha256="17ym1y90bz85afanggdjf91a49lz89qmmi2kyhxga0cw056lkdz0"; depends=[Biobase cluster lattice]; };
  EBcoexpress = derive2 { name="EBcoexpress"; version="1.48.0"; sha256="0sfakxc2zz38w6krss8jqzkpvpmg8pj6xxc24775jhndv3aqjih1"; depends=[EBarrays mclust minqa]; };
  EDASeq = derive2 { name="EDASeq"; version="2.38.0"; sha256="18h9zlah21lghy1sjpnzy6lddmff8vh3raxnqi15v00za9azk8yq"; depends=[AnnotationDbi aroma_light Biobase BiocGenerics BiocManager biomaRt Biostrings GenomicFeatures GenomicRanges IRanges Rsamtools ShortRead]; };
  EDIRquery = derive2 { name="EDIRquery"; version="1.4.0"; sha256="154bnyjlvds909y95rmbd8x32rkhqfpkhb6vjbqhm56z4c9z33x7"; depends=[GenomicRanges InteractionSet readr tibble tictoc]; };
  EGAD = derive2 { name="EGAD"; version="1.32.0"; sha256="0y1fwvqmrvv8v7i8ncqaxbmpflaybbgnjn09qqzpmsavfk10wvgh"; depends=[Biobase GEOquery gplots igraph impute limma MASS plyr RColorBrewer RCurl zoo]; };
  EGSEA = derive2 { name="EGSEA"; version="1.32.0"; sha256="1fpa26l0jimy1b36cw71abgmn1zj10j4lkpc5g4k09kc74nmivqi"; depends=[AnnotationDbi Biobase DT edgeR EGSEAdata gage ggplot2 globaltest gplots GSVA HTMLUtils htmlwidgets hwriter limma metap org_Hs_eg_db org_Mm_eg_db org_Rn_eg_db PADOG pathview plotly RColorBrewer safe stringi topGO]; };
  ELMER = derive2 { name="ELMER"; version="2.28.0"; sha256="012vxjagm3m9v98ds89xfwncnxzhwqlk7yigadnw73vg5r8ix6zd"; depends=[biomaRt circlize ComplexHeatmap DelayedArray doParallel downloader dplyr ELMER_data GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 ggpubr ggrepel gridExtra Gviz IRanges lattice magrittr Matrix MultiAssayExperiment plotly plyr progress purrr readr reshape reshape2 rmarkdown rtracklayer rvest S4Vectors scales stringr SummarizedExperiment TCGAbiolinks tibble tidyr xml2]; };
  EMDomics = derive2 { name="EMDomics"; version="2.34.0"; sha256="0lyaia1ngsw909avldz1pmly16v36ldqq1r7jz23fzmqa63ch87r"; depends=[BiocParallel CDFt emdist ggplot2 matrixStats preprocessCore]; };
  ENmix = derive2 { name="ENmix"; version="1.40.1"; sha256="1f41wvj1c78kkdrzp8dv5mfjfrjqpd32sp6lhh5mii1lvjb77ycc"; depends=[AnnotationHub Biobase doParallel dynamicTreeCut ExperimentHub foreach genefilter geneplotter gplots gtools illuminaio impute IRanges irlba matrixStats minfi quadprog RPMM S4Vectors SummarizedExperiment]; };
  ERSSA = derive2 { name="ERSSA"; version="1.22.0"; sha256="1bm64ydz0qlfm6vdrhqr699sc0njm6npdq0pmh2xb3w6iwh9dy92"; depends=[apeglm BiocParallel DESeq2 edgeR ggplot2 plyr RColorBrewer]; };
  EWCE = derive2 { name="EWCE"; version="1.12.0"; sha256="19j1bl179kcih54ry9m4pgl9qvylkxyjaqk6pzna9wm5dpzdqnsl"; depends=[BiocParallel data_table DelayedArray dplyr ewceData ggplot2 HGNChelper limma Matrix orthogene reshape2 RNOmni SingleCellExperiment stringr SummarizedExperiment]; };
  EasyCellType = derive2 { name="EasyCellType"; version="1.6.0"; sha256="0czz6yy7534xzfr28kp18hy47sdzsfkzpd9hz1jx5rfgl4sg6hbn"; depends=[AnnotationDbi BiocStyle clusterProfiler dplyr forcats ggplot2 magrittr org_Hs_eg_db org_Mm_eg_db rlang vctrs]; };
  EmpiricalBrownsMethod = derive2 { name="EmpiricalBrownsMethod"; version="1.32.0"; sha256="1r34sj45liw2ya6842c4fxnph6kax712f8mqr0flvcy2k7g45ccn"; depends=[]; };
  EnMCB = derive2 { name="EnMCB"; version="1.16.0"; sha256="1m3d92abl2qdkd82wnf6imx9xgxi4w94wiy84vnwn9g3r9kxl1p2"; depends=[BiocFileCache boot e1071 ggplot2 glmnet igraph Matrix mboost rms survival survivalROC survivalsvm]; };
  EnhancedVolcano = derive2 { name="EnhancedVolcano"; version="1.22.0"; sha256="0ry5r74d6m5x15b4azw93mjrvq4fapj4rxpi9f6macz4l5l6j1j0"; depends=[ggplot2 ggrepel]; };
  EnrichedHeatmap = derive2 { name="EnrichedHeatmap"; version="1.34.0"; sha256="0fmqz9xqs1108a5xxpsc63pplcc0i742r4zdk46p68my28ba2xfq"; depends=[circlize ComplexHeatmap GenomicRanges GetoptLong IRanges locfit matrixStats Rcpp]; };
  EnrichmentBrowser = derive2 { name="EnrichmentBrowser"; version="2.34.1"; sha256="1drmdr1z2fyyf566vv5arkbwpfkwxajh555nasnkbnpqdrq3b93q"; depends=[AnnotationDbi BiocFileCache BiocManager edgeR GO_db graph graphite GSEABase hwriter KEGGgraph KEGGREST limma pathview Rgraphviz S4Vectors safe SPIA SummarizedExperiment]; };
  EpiDISH = derive2 { name="EpiDISH"; version="2.20.0"; sha256="17qkm5inavfdfrim9baqxdhs3w64c6y94qadw4y5p9xsck318frq"; depends=[e1071 locfdr MASS Matrix matrixStats quadprog stringr]; };
  EpiMix = derive2 { name="EpiMix"; version="1.6.1"; sha256="1m8mlxhci56d4d1iingwj8ddmddpm02an8dhh6m4ka4vpg7q51as"; depends=[AnnotationDbi AnnotationHub Biobase biomaRt data_table doParallel doSNOW downloader dplyr ELMER_data EpiMix_data ExperimentHub foreach GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 impute IRanges limma plyr progress R_matlab RColorBrewer RCurl rlang RPMM S4Vectors SummarizedExperiment tibble tidyr]; };
  EpiTxDb = derive2 { name="EpiTxDb"; version="1.16.0"; sha256="11f2a9qhbl605mzj6z673j0hlgd3a80c2qigkcw9q81745rd5lrg"; depends=[AnnotationDbi BiocFileCache BiocGenerics Biostrings curl DBI GenomeInfoDb GenomicFeatures GenomicRanges httr IRanges Modstrings rex RSQLite S4Vectors tRNAdbImport txdbmaker xml2]; };
  EventPointer = derive2 { name="EventPointer"; version="3.12.0"; sha256="1d13s9pww3kjdm0nfnz598jng9vl66jl6y52rczdcflxikfgip0i"; depends=[abind affxparser Biostrings BSgenome cobs doParallel fgsea foreach GenomeInfoDb GenomicFeatures GenomicRanges glmnet graph igraph IRanges iterators limma lpSolve MASS Matrix matrixStats nnls poibin prodlim qvalue RBGL rhdf5 S4Vectors SGSeq speedglm stringr SummarizedExperiment tximport]; };
  ExCluster = derive2 { name="ExCluster"; version="1.22.0"; sha256="1drpwz9pba4w36sbp53jrlmwbzr68fysrzqa06qb5347sxl94ac1"; depends=[GenomicRanges IRanges matrixStats Rsubread rtracklayer]; };
  ExiMiR = derive2 { name="ExiMiR"; version="2.46.0"; sha256="01bdi0d9afwyndfcjkaand4qpmbx6i437183s9g16i13vzwh1wk4"; depends=[affy affyio Biobase limma preprocessCore]; };
  ExperimentHub = derive2 { name="ExperimentHub"; version="2.12.0"; sha256="0mj1aqxyp84mn5m0fwk9lijysy594hhga3kv4mddv45vqxdsr08h"; depends=[AnnotationHub BiocFileCache BiocGenerics BiocManager rappdirs S4Vectors]; };
  ExperimentHubData = derive2 { name="ExperimentHubData"; version="1.30.0"; sha256="1adm3b0nacbdi4x5z71iiif9d876m3ip6crhbbr2hw4mbk6is7qn"; depends=[AnnotationHubData BiocGenerics BiocManager curl DBI ExperimentHub httr S4Vectors]; };
  ExperimentSubset = derive2 { name="ExperimentSubset"; version="1.14.0"; sha256="0san9jjdgx9m5cl2pdn17v6j6vd865jr80r4258fifywr7yqdnm1"; depends=[Matrix S4Vectors SingleCellExperiment SpatialExperiment SummarizedExperiment TreeSummarizedExperiment]; };
  ExploreModelMatrix = derive2 { name="ExploreModelMatrix"; version="1.16.0"; sha256="01ys9p7q3pmz7qfw1ggppchqq8yzrjsd91fa1r6h3a2rz8azdi2g"; depends=[cowplot dplyr DT ggplot2 limma magrittr MASS rintrojs S4Vectors scales shiny shinydashboard shinyjs tibble tidyr]; };
  ExpressionAtlas = derive2 { name="ExpressionAtlas"; version="1.32.0"; sha256="1plxw5jf2lpa8away57nr1jch14d3lz0f33sjv958kyqzhar7zml"; depends=[Biobase BiocStyle httr jsonlite limma RCurl S4Vectors SummarizedExperiment XML xml2]; };
  FEAST = derive2 { name="FEAST"; version="1.12.0"; sha256="0w6pkq3lc9l42fnwa35lcnbw52ylbjs65w6dsh2k5wcgs0jig8rp"; depends=[BiocParallel irlba matrixStats mclust SC3 SingleCellExperiment SummarizedExperiment TSCAN]; };
  FELLA = derive2 { name="FELLA"; version="1.24.0"; sha256="1rbb5lfz7maicw0hx5sd1jg9rqxlcmv6bfyakp4ics9azxwk899i"; depends=[igraph KEGGREST Matrix plyr]; };
  FGNet = derive2 { name="FGNet"; version="3.38.0"; sha256="128dc1mhqj0vxqcivra79k0c8jwr9zcrcwzkkr69czzv5i7szw8d"; depends=[hwriter igraph plotrix png R_utils RColorBrewer reshape2 XML]; };
  FISHalyseR = derive2 { name="FISHalyseR"; version="1.38.0"; sha256="1f3iv48l2wbx8izn0z0lnk2k8ssm6bj6ai02kd5ww5kk7gqg6ka7"; depends=[abind EBImage]; };
  FLAMES = derive2 { name="FLAMES"; version="1.10.0"; sha256="1fcz0v1vy0q5zmdpawlk4a7fbqd01954p0jby9nbzgbk85hl16mi"; depends=[bambu basilisk BiocGenerics Biostrings circlize ComplexHeatmap cowplot dplyr DropletUtils future GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggbio ggplot2 gridExtra igraph IRanges jsonlite magrittr Matrix MultiAssayExperiment RColorBrewer Rcpp reticulate Rhtslib Rsamtools rtracklayer S4Vectors scater scran scuttle SingleCellExperiment stringr SummarizedExperiment testthat tibble tidyr tidyselect txdbmaker withr zlibbioc]; };
  FRASER = derive2 { name="FRASER"; version="2.0.0"; sha256="0q36p80ff0hq37ddjpx6czkllpmlkj00h6fq32hbmr9cyh3rz2d8"; depends=[AnnotationDbi BBmisc Biobase BiocGenerics BiocParallel biomaRt BSgenome cowplot data_table DelayedArray DelayedMatrixStats extraDistr generics GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 ggrepel HDF5Array IRanges matrixStats OUTRIDER pcaMethods pheatmap plotly PRROC R_utils RColorBrewer Rcpp RcppArmadillo rhdf5 Rsamtools Rsubread S4Vectors SummarizedExperiment tibble VGAM]; };
  FRGEpistasis = derive2 { name="FRGEpistasis"; version="1.40.0"; sha256="0fpph9rrkakaxah4f8bcbny4yd8w4zp38666ff8mrvvlzx5fn313"; depends=[fda MASS]; };
  FamAgg = derive2 { name="FamAgg"; version="1.32.0"; sha256="0qcd028bamdj4v24rdqymk2zc02kj7yc8p1q19vvzk8h1hxvh98l"; depends=[BiocGenerics gap igraph kinship2 Matrix survey]; };
  FastqCleaner = derive2 { name="FastqCleaner"; version="1.22.0"; sha256="0bwbg3b8w27whbg8gl2ga58fwm95cyra45f2y609izrx9vjz7dcr"; depends=[Biostrings DT htmltools IRanges Rcpp S4Vectors shiny shinyBS ShortRead]; };
  FeatSeekR = derive2 { name="FeatSeekR"; version="1.4.0"; sha256="0r72wl0wjzfvh8wmpn6ppffsh6yrydkyni1pbxsw865j5rkiiyqd"; depends=[MASS pheatmap pracma SummarizedExperiment]; };
  FilterFFPE = derive2 { name="FilterFFPE"; version="1.14.0"; sha256="1pjks7wadlyyhaz9lcrhxamjqjaq0nnyxkv6jxb4adrh5hwvgxfx"; depends=[doParallel foreach GenomicRanges IRanges Rsamtools S4Vectors]; };
  FindIT2 = derive2 { name="FindIT2"; version="1.10.0"; sha256="03bfmxln17lnvzmmsc3g64nk1vs6fg4bphlszqgxhdxwbjjg4nf2"; depends=[BiocGenerics BiocParallel dplyr GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 ggrepel glmnet IRanges MultiAssayExperiment patchwork progress purrr qvalue rlang rtracklayer S4Vectors stringr SummarizedExperiment tibble tidyr withr]; };
  FitHiC = derive2 { name="FitHiC"; version="1.30.0"; sha256="107hm9k9wfr34fradldmjym2bzxb6qx8109p4a7xrqkiya0hmwwa"; depends=[data_table fdrtool Rcpp]; };
  FlowSOM = derive2 { name="FlowSOM"; version="2.12.0"; sha256="0xqrp184p00pvzzf6ddmp2r8lpg97bm0q6smjwcrfb8rn4msxmis"; depends=[BiocGenerics colorRamps ConsensusClusterPlus dplyr flowCore ggforce ggnewscale ggplot2 ggpubr igraph magrittr rlang Rtsne tidyr XML]; };
  FuseSOM = derive2 { name="FuseSOM"; version="1.6.0"; sha256="1qbk2rdc7fdhkglwzhsyrysb51qwjsyjy9m6pgbbcwi14iwwhnf2"; depends=[analogue cluster coop diptest fastcluster FCPS fpc ggplot2 ggplotify ggpubr pheatmap proxy psych Rcpp S4Vectors stringr SummarizedExperiment]; };
  GA4GHclient = derive2 { name="GA4GHclient"; version="1.28.0"; sha256="1x5k9l2f4fw5da1aacwd0b7rn9kjpbzf8vl9h76n4d92fdh25jlh"; depends=[BiocGenerics Biostrings dplyr GenomeInfoDb GenomicRanges httr IRanges jsonlite S4Vectors VariantAnnotation]; };
  GA4GHshiny = derive2 { name="GA4GHshiny"; version="1.26.0"; sha256="1vj0p1akcgzq2q43yir0g2klggjw8970chhzibw7yb5qxr2fz9ai"; depends=[AnnotationDbi BiocGenerics dplyr DT GA4GHclient GenomeInfoDb GenomicFeatures openxlsx purrr S4Vectors shiny shinyjs shinythemes tidyr]; };
  GARS = derive2 { name="GARS"; version="1.24.0"; sha256="1wi56b6h1fi1rr4hrpbby6iwgax36q01h6hr2nm4bgb7cx6l3bii"; depends=[cluster DaMiRseq ggplot2 MLSeq SummarizedExperiment]; };
  GAprediction = derive2 { name="GAprediction"; version="1.30.0"; sha256="0p38ivjzp0nsyr85a323xgjwb2amsmvr10ajq9m51z9acl4jzakx"; depends=[glmnet Matrix]; };
  GBScleanR = derive2 { name="GBScleanR"; version="1.8.18"; sha256="1il1h9njfvhi4kxn30bhc31nkmr91b9imfafq68ccz947ckzhkpm"; depends=[expm gdsfmt ggplot2 Rcpp RcppParallel SeqArray tidyr]; };
  GDCRNATools = derive2 { name="GDCRNATools"; version="1.24.0"; sha256="1grhgzl08f2infvvpd5084mvplvgqb0qa7d6afrfv6n5wigwnvbv"; depends=[BiocParallel biomaRt clusterProfiler DESeq2 DOSE DT edgeR GenomicDataCommons ggplot2 gplots jsonlite limma org_Hs_eg_db pathview rjson shiny survival survminer XML]; };
  GDSArray = derive2 { name="GDSArray"; version="1.24.0"; sha256="0s78y646vr1m2lcsg91yy5xzc328hfbx0lnzyfg9pavp0d12yzip"; depends=[BiocGenerics DelayedArray gdsfmt S4Vectors SeqArray SNPRelate]; };
  GEM = derive2 { name="GEM"; version="1.30.0"; sha256="1idp44h5szwwradv6i4bkgy055gaa04d5sxrv0r683h717pqagh5"; depends=[ggplot2]; };
  GENESIS = derive2 { name="GENESIS"; version="2.34.0"; sha256="1jk0mw183v2nxabx58kwm8fwm6r2ikbc90ilxdmivfsxc7gx534r"; depends=[Biobase BiocGenerics BiocParallel data_table gdsfmt GenomicRanges GWASTools igraph IRanges Matrix reshape2 S4Vectors SeqArray SeqVarTools SNPRelate]; };
  GENIE3 = derive2 { name="GENIE3"; version="1.26.0"; sha256="0ijwyx42saqas52273c63c3yi948bh4pd4lifyqi3zjjs17bj1cg"; depends=[dplyr reshape2]; };
  GEOexplorer = derive2 { name="GEOexplorer"; version="1.10.0"; sha256="0hb9hgkb5nc2mdri18y22s4qi5hdp3zclmpdz2q7hdvqhqg6kqzv"; depends=[Biobase car DT edgeR enrichR factoextra GEOquery ggplot2 heatmaply htmltools httr impute knitr limma markdown pheatmap plotly R_utils readxl scales shiny shinybusy shinycssloaders shinyHeatmaply stringr sva umap xfun XML xml2]; };
  GEOfastq = derive2 { name="GEOfastq"; version="1.12.0"; sha256="18wi24a6j04fflank3rw4z852j21zarca0by7g5kwq1ym2dy2xld"; depends=[doParallel foreach plyr RCurl rvest stringr xml2]; };
  GEOmetadb = derive2 { name="GEOmetadb"; version="1.66.0"; sha256="0yafdqcwkyv3sc3wcfbpciy04vqciqjfihsf0gyfcza75gjkqy0w"; depends=[GEOquery RSQLite]; };
  GEOquery = derive2 { name="GEOquery"; version="2.72.0"; sha256="0rqyv95l8h3s68ywhv3r7hm7j1mbm8prql7p2rlvv4xg31yqmnpl"; depends=[Biobase curl data_table dplyr limma magrittr R_utils readr tidyr xml2]; };
  GEOsubmission = derive2 { name="GEOsubmission"; version="1.56.0"; sha256="1kvk6v1pj6f252lzlvw79ffd7wadlc6kvpa174msi75ww5s2qfc0"; depends=[affy Biobase]; };
  GEWIST = derive2 { name="GEWIST"; version="1.48.0"; sha256="0q6rbx7qy8cmdafv4qabx6ppyq3x6658jr0139xv61nzgi8395v4"; depends=[car]; };
  GGPA = derive2 { name="GGPA"; version="1.16.0"; sha256="1lg62vxn4z6z3l9d18gmyvdr456hs76lczxfq8j2w509gflcrskb"; depends=[GGally matrixStats network Rcpp RcppArmadillo scales sna]; };
  GIGSEA = derive2 { name="GIGSEA"; version="1.22.0"; sha256="1yhxpm1amm6anzcss31pkg5xzw4q1nq1hjb6rx5p7a5dh9h8hdna"; depends=[locfdr MASS Matrix]; };
  GLAD = derive2 { name="GLAD"; version="2.68.0"; sha256="01qn4v7b7b633dz01njzmg48lga861pfqnys9f0fbk9damxc6rr1"; depends=[aws]; };
  GMRP = derive2 { name="GMRP"; version="1.32.0"; sha256="0g2pmnngpv9k7gaz7bd5b0gn9i0i86q36fcapai93w76ml8ccvab"; depends=[diagram GenomicRanges plotrix]; };
  GNET2 = derive2 { name="GNET2"; version="1.20.0"; sha256="1hgzvl4k5q84ig9njmfvmdwc64h7nwsg0kcsi3da3mizxahaj780"; depends=[DiagrammeR dplyr ggplot2 igraph matrixStats Rcpp reshape2 SummarizedExperiment xgboost]; };
  GNOSIS = derive2 { name="GNOSIS"; version="1.2.0"; sha256="0m20w85kixxqydrrf5cbphr1hvzlc2wmwjf68s9rr0llcfv7gy3r"; depends=[car cBioPortalData compareGroups dashboardthemes DescTools DT fabricatr fontawesome maftools magrittr operator_tools partykit RColorBrewer reshape2 rpart rstatix shiny shinycssloaders shinydashboard shinydashboardPlus shinyjs shinylogs shinymeta shinyWidgets survival survminer tidyverse]; };
  GOSemSim = derive2 { name="GOSemSim"; version="2.30.0"; sha256="0985w9b2iw7jbmpymfvqmpzshsy0lvqw7whc1djdnh58lwscnhcq"; depends=[AnnotationDbi GO_db Rcpp rlang yulab_utils]; };
  GOTHiC = derive2 { name="GOTHiC"; version="1.40.0"; sha256="101mf3pkchz0il0czrwixx1pv8hq9cjh8m59nii00m2vwma3slrd"; depends=[BiocGenerics BiocManager Biostrings BSgenome data_table GenomeInfoDb GenomicRanges ggplot2 IRanges Rsamtools rtracklayer S4Vectors ShortRead]; };
  GOexpress = derive2 { name="GOexpress"; version="1.38.0"; sha256="0hz01hmp4bf9njw79zqy08zx9q3c6qfs2xykz5x7xkngp65mzkxf"; depends=[Biobase biomaRt ggplot2 gplots randomForest RColorBrewer RCurl stringr]; };
  GOfuncR = derive2 { name="GOfuncR"; version="1.24.0"; sha256="1g3nppcmyj81ia3v9zvsr8jplk8kmvssspvxd94zxh6yb3wrrc6v"; depends=[AnnotationDbi GenomicRanges gtools IRanges mapplots Rcpp vioplot]; };
  GOpro = derive2 { name="GOpro"; version="1.30.0"; sha256="0s8yyg5myxvw61zai54d3dhai1cm43i8s8wnpf0qc476q4v2xgzl"; depends=[AnnotationDbi BH dendextend doParallel foreach GO_db IRanges MultiAssayExperiment org_Hs_eg_db Rcpp S4Vectors]; };
  GOstats = derive2 { name="GOstats"; version="2.70.0"; sha256="1dygsr8nlqksfpk00lk67dhj4fcpjg1x4dbl2r4sfanlk4hq76cs"; depends=[annotate AnnotationDbi AnnotationForge Biobase Category GO_db graph RBGL Rgraphviz]; };
  GPA = derive2 { name="GPA"; version="1.16.0"; sha256="1z97rwlqvahsjcrm1j00cz9lgnw1wym6lwhi7gf8g17avgk6s7g4"; depends=[DT ggplot2 ggrepel plyr Rcpp shiny shinyBS vegan]; };
  GRENITS = derive2 { name="GRENITS"; version="1.56.0"; sha256="04nbvr080s6syb2d981g4402ghl2gh6f2gwsiv41nnj4narvs752"; depends=[ggplot2 Rcpp RcppArmadillo reshape2]; };
  GRaNIE = derive2 { name="GRaNIE"; version="1.8.0"; sha256="1zdi6h1kmnj3b23qv268jg0iqfvgvn0h17d5l17yx3si9czcr8qr"; depends=[AnnotationHub biomaRt Biostrings checkmate circlize colorspace ComplexHeatmap data_table DESeq2 dplyr ensembldb forcats futile_logger GenomeInfoDb GenomicRanges ggplot2 gridExtra igraph limma magrittr Matrix matrixStats patchwork progress RColorBrewer readr reshape2 rlang S4Vectors scales stringr SummarizedExperiment tibble tidyr tidyselect topGO viridis]; };
  GRmetrics = derive2 { name="GRmetrics"; version="1.30.0"; sha256="02dqb1n4q5zwhfhmdrynfa5djgnvry11x69r3z94rscxl94k9pan"; depends=[drc ggplot2 plotly S4Vectors SummarizedExperiment]; };
  GSALightning = derive2 { name="GSALightning"; version="1.32.0"; sha256="0cmp5c22fhykld7napzk2220lzzizslsx2zi0slmiifapcrjg9vy"; depends=[data_table Matrix]; };
  GSAR = derive2 { name="GSAR"; version="1.38.0"; sha256="0i3k977vv3ik9yjgwpv7r1wnd982a1m2vg5rawi99hkf703cjly6"; depends=[igraph]; };
  GSCA = derive2 { name="GSCA"; version="2.34.0"; sha256="1lycrigmlr8kcmc1svnxl3g8rzlhpk8kfmvspllyfp8cls35mypw"; depends=[ggplot2 gplots RColorBrewer reshape2 rhdf5 shiny sp]; };
  GSEABase = derive2 { name="GSEABase"; version="1.66.0"; sha256="1pnd8rmpk7gm89cvrqa8qwk40dszkfkhyydxp3gl13zng9c5bq40"; depends=[annotate AnnotationDbi Biobase BiocGenerics graph XML]; };
  GSEABenchmarkeR = derive2 { name="GSEABenchmarkeR"; version="1.24.0"; sha256="11aczfpbc31wq9h2ri7gn17ki2f61s801zik2lkwgvly9627kfzi"; depends=[AnnotationDbi AnnotationHub Biobase BiocFileCache BiocParallel edgeR EnrichmentBrowser ExperimentHub KEGGandMetacoreDzPathwaysGEO KEGGdzPathwaysGEO S4Vectors SummarizedExperiment]; };
  GSEAlm = derive2 { name="GSEAlm"; version="1.64.0"; sha256="0fh6fds2y7fsdg6r97ydbkayryxxlw2jrc9kq4knsvagj2jb72ph"; depends=[Biobase]; };
  GSEAmining = derive2 { name="GSEAmining"; version="1.14.0"; sha256="1qzvmji5qn25q3lgb06k0dsxcn65krsrsrh6n06azz8ybkja9sj6"; depends=[dendextend dplyr ggplot2 ggwordcloud gridExtra rlang stringr tibble tidytext]; };
  GSRI = derive2 { name="GSRI"; version="2.52.0"; sha256="0b8r1cih0zn8aj9nbpmqwiiqfhk9a2f0bxcqyx77g5jlg9b504kq"; depends=[Biobase fdrtool genefilter GSEABase les]; };
  GSReg = derive2 { name="GSReg"; version="1.38.0"; sha256="1wfapjggz0qnaq9cg30d51c0zm5z6bhhf764qwgcbs9ngyjfwbvx"; depends=[AnnotationDbi GenomicFeatures Homo_sapiens org_Hs_eg_db]; };
  GSVA = derive2 { name="GSVA"; version="1.52.3"; sha256="08nxg3q350n5gf975r6b0zq4cr7lchv2i811crc4xbb7q39kw8k4"; depends=[Biobase BiocParallel BiocSingular DelayedArray DelayedMatrixStats GSEABase HDF5Array IRanges Matrix S4Vectors SingleCellExperiment sparseMatrixStats SpatialExperiment SummarizedExperiment]; };
  GSgalgoR = derive2 { name="GSgalgoR"; version="1.14.0"; sha256="0mr0gdn5zkikjn5i5clq73vgmbnirl2abp84bjyzm5pf5dknjpmh"; depends=[cluster doParallel foreach matchingR nsga2R proxy survival]; };
  GUIDEseq = derive2 { name="GUIDEseq"; version="1.34.0"; sha256="1xn44w1z1izzf2qr4xsmrvc468swjp6zmf4wxc33jbk5r9lv0n0x"; depends=[BiocGenerics Biostrings BSgenome ChIPpeakAnno CRISPRseek data_table dplyr GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 hash IRanges limma matrixStats multtest openxlsx patchwork purrr pwalign rio rlang Rsamtools S4Vectors stringr tidyr]; };
  GWAS_BAYES = derive2 { name="GWAS.BAYES"; version="1.14.0"; sha256="05fp1wrddk9a961cx2ps0cad9rzagsyrfyfck6h1v3xb5gmz03ik"; depends=[caret GA limma MASS Matrix memoise]; };
  GWASTools = derive2 { name="GWASTools"; version="1.50.0"; sha256="013qv2wac90s1rv992bwzq4diqfq7r18qk7gcifmi22samplpnw4"; depends=[Biobase data_table DBI DNAcopy gdsfmt GWASExactHW lmtest logistf quantsmooth RSQLite sandwich survival]; };
  GWENA = derive2 { name="GWENA"; version="1.14.0"; sha256="1vwc7n0kyza4w3p7fbfrji6vamn042nwz4wa51ymcwg62j5k6yxk"; depends=[cluster dplyr dynamicTreeCut ggplot2 gprofiler2 igraph magrittr matrixStats NetRep purrr RColorBrewer rlist stringr SummarizedExperiment tibble tidyr WGCNA]; };
  GateFinder = derive2 { name="GateFinder"; version="1.24.0"; sha256="1rcxjnjcgd3j8vm4kz97qcvgbwxs0jb66p8wzfqkcjh0p99j6a6q"; depends=[diptest flowCore flowFP mvoutlier splancs]; };
  GeDi = derive2 { name="GeDi"; version="1.0.0"; sha256="193fnp0v74bsdszxxxywz9r45xqlmvn5vg0n5fcq1w8f15rpgizg"; depends=[BiocFileCache BiocNeighbors BiocParallel bs4Dash ComplexHeatmap dplyr DT fontawesome GeneTonic ggdendro ggplot2 GOSemSim igraph Matrix plotly RColorBrewer readxl rintrojs scales shiny shinyBS shinycssloaders shinyWidgets STRINGdb tm visNetwork wordcloud2]; };
  GenProSeq = derive2 { name="GenProSeq"; version="1.8.0"; sha256="0hpf03pjfi01l2afsm1wp5vc077adx06pb4ks602v5mxy9dm1x1y"; depends=[CatEncoders DeepPINCS keras mclust reticulate tensorflow ttgsea word2vec]; };
  GenVisR = derive2 { name="GenVisR"; version="1.36.0"; sha256="1xzzdy2mcy8as3szygly3kw6k7g5dp2vxmimcw6738fj37zbcd77"; depends=[AnnotationDbi BiocGenerics biomaRt Biostrings BSgenome data_table DBI GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 gridExtra gtable gtools IRanges plyr reshape2 Rsamtools scales VariantAnnotation viridis]; };
  GeneBreak = derive2 { name="GeneBreak"; version="1.34.0"; sha256="0vgid513n8xra71nhabxdy0h6ffqr84sf9gzaccx27yiw2l1wg4s"; depends=[CGHbase CGHcall GenomicRanges QDNAseq]; };
  GeneExpressionSignature = derive2 { name="GeneExpressionSignature"; version="1.50.0"; sha256="0rflr71jfaiyhzymvr0x9cq4mcb153qq2m4x912jawc46wf4cj3x"; depends=[Biobase]; };
  GeneGA = derive2 { name="GeneGA"; version="1.54.0"; sha256="1gw9bxdmaak4g6chpya4xrvazrzb49bwlq1jk952vvgkrgcvnas1"; depends=[hash seqinr]; };
  GeneGeneInteR = derive2 { name="GeneGeneInteR"; version="1.30.0"; sha256="05d9i4nz7gf6g0g1bp0zpn3kqqfzf1lcjy7y67m1z8s96svkal47"; depends=[data_table FactoMineR GenomicRanges igraph IRanges kernlab mvtnorm Rsamtools snpStats]; };
  GeneMeta = derive2 { name="GeneMeta"; version="1.76.0"; sha256="1x73k2xid41f25yrzah3s9pqk51r0nda758kvfvh5py04yxs9xf1"; depends=[Biobase genefilter]; };
  GeneNetworkBuilder = derive2 { name="GeneNetworkBuilder"; version="1.46.0"; sha256="1gjirjj809c1vc3y4k07j8md0m0bksjkfy68v1v8b2d9kfws5vwc"; depends=[graph htmlwidgets plyr Rcpp Rgraphviz rjson XML]; };
  GeneOverlap = derive2 { name="GeneOverlap"; version="1.40.0"; sha256="0bfd4322m6g7dvas214i17k8sjsf62lza9darmhiwb4r8h30qmb2"; depends=[gplots RColorBrewer]; };
  GeneRegionScan = derive2 { name="GeneRegionScan"; version="1.60.0"; sha256="01vrw0k8s62i3mzk5f7mrnh7294i5smqgfz00bl0wjhy9yak5j34"; depends=[affxparser Biobase Biostrings RColorBrewer S4Vectors]; };
  GeneSelectMMD = derive2 { name="GeneSelectMMD"; version="2.48.0"; sha256="044i85vnvr5l1c1sbsh6s777invnch9yjkx3ffki9m0xnilvv5al"; depends=[Biobase limma MASS]; };
  GeneStructureTools = derive2 { name="GeneStructureTools"; version="1.24.0"; sha256="19inj0ds7hh4n5cq9mgi4ahx46cxpad2pfdmmhrzvlbm8ss4yw6x"; depends=[Biostrings BSgenome_Mmusculus_UCSC_mm10 data_table GenomicRanges Gviz IRanges plyr rtracklayer S4Vectors stringdist stringr]; };
  GeneTonic = derive2 { name="GeneTonic"; version="2.8.0"; sha256="0f84sbqkhh74al1rn8fhkg4vmy0i06qadl7342gawqngxfcffzkn"; depends=[AnnotationDbi backbone bs4Dash circlize colorspace colourpicker ComplexHeatmap ComplexUpset dendextend DESeq2 dplyr DT dynamicTreeCut expm ggforce ggplot2 ggrepel ggridges GO_db igraph matrixStats plotly RColorBrewer rintrojs rlang rmarkdown S4Vectors scales shiny shinyAce shinycssloaders shinyWidgets SummarizedExperiment tidyr tippy viridis visNetwork]; };
  GeneticsPed = derive2 { name="GeneticsPed"; version="1.66.0"; sha256="0cm65szy3nmkaxsrmv1qhpk8jsxma6b4y0v2nxg6hdqjn7z4zk43"; depends=[gdata genetics MASS]; };
  GenomAutomorphism = derive2 { name="GenomAutomorphism"; version="1.6.0"; sha256="13hflp7aglv8xadf1zgla8d0j1h4m4rrk0lyy0i0mxfhihl0wba8"; depends=[BiocGenerics BiocParallel Biostrings data_table doParallel dplyr foreach GenomeInfoDb GenomicRanges IRanges matrixStats numbers S4Vectors XVector]; };
  GenomeInfoDb = derive2 { name="GenomeInfoDb"; version="1.40.1"; sha256="155wj17pbdbixyg6mimv06wg3ylll8ysqh7rffjp65fw662jwhw0"; depends=[BiocGenerics GenomeInfoDbData IRanges S4Vectors UCSC_utils]; };
  GenomicAlignments = derive2 { name="GenomicAlignments"; version="1.40.0"; sha256="15jzdjna0r9n6ybvyw52v1d9f05vdsdxff0g8q0pa584a1sd2s7s"; depends=[BiocGenerics BiocParallel Biostrings GenomeInfoDb GenomicRanges IRanges Rsamtools S4Vectors SummarizedExperiment]; };
  GenomicDataCommons = derive2 { name="GenomicDataCommons"; version="1.28.0"; sha256="0jg4sa1lqn028y2ympb3x4s8yr7qa8ajrwqj2hhcl8zss3sx8gr2"; depends=[dplyr GenomicRanges httr IRanges jsonlite magrittr rappdirs readr rlang tibble tidyr xml2]; };
  GenomicDistributions = derive2 { name="GenomicDistributions"; version="1.12.0"; sha256="0yicpl29qcwyzswaxqd50sa12lg8c9d5i7xgdf2m7jwskx6nx5hx"; depends=[Biostrings broom data_table dplyr GenomeInfoDb GenomicRanges ggplot2 IRanges plyr reshape2 scales]; };
  GenomicFeatures = derive2 { name="GenomicFeatures"; version="1.56.0"; sha256="1r1d9g5vq5y946v2z2xgmfb31k0576nj8i0yg6xfj9y2a0a6akc5"; depends=[AnnotationDbi BiocGenerics Biostrings DBI GenomeInfoDb GenomicRanges IRanges rtracklayer S4Vectors XVector]; };
  GenomicFiles = derive2 { name="GenomicFiles"; version="1.40.0"; sha256="1b0n5aqvg6jb6rpikjzxndmcjxp31h6vhr1magzalqg7jmlvcv6i"; depends=[BiocGenerics BiocParallel GenomeInfoDb GenomicAlignments GenomicRanges IRanges MatrixGenerics Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation]; };
  GenomicInteractionNodes = derive2 { name="GenomicInteractionNodes"; version="1.8.0"; sha256="1xkrmpsgqqsd470f4dgnbs5zb62qfrbpmzw97jsarri57pmqxy7a"; depends=[AnnotationDbi GenomeInfoDb GenomicFeatures GenomicRanges GO_db graph IRanges RBGL S4Vectors]; };
  GenomicInteractions = derive2 { name="GenomicInteractions"; version="1.38.0"; sha256="16aaaa4nr1y5ng1hzw87q950clid28iqf4gkypcpihg3cz69axxg"; depends=[Biobase BiocGenerics data_table dplyr GenomeInfoDb GenomicRanges ggplot2 gridExtra Gviz igraph InteractionSet IRanges Rsamtools rtracklayer S4Vectors stringr]; };
  GenomicOZone = derive2 { name="GenomicOZone"; version="1.18.0"; sha256="0i130gwf2ifgm635dhshfmnj97jqlz5nkwb98jbgz4ciq7mpdwv8"; depends=[biomaRt Ckmeans_1d_dp GenomeInfoDb GenomicRanges ggbio ggplot2 gridExtra IRanges lsr plyr Rdpack S4Vectors]; };
  GenomicPlot = derive2 { name="GenomicPlot"; version="1.2.2"; sha256="0s5slbkr6cpy5asl8v1fr914zgqg1q6gcwwf9nb0r8qh469c54pd"; depends=[BiocGenerics circlize ComplexHeatmap cowplot dplyr edgeR genomation GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 ggplotify ggpubr ggsci ggsignif IRanges plyranges RCAS Rsamtools rtracklayer scales tidyr txdbmaker VennDiagram viridis]; };
  GenomicRanges = derive2 { name="GenomicRanges"; version="1.56.1"; sha256="0g0ld9i58pdxw2pwxi9nzj82mkryag457pvh6cvbvhb28pfamkma"; depends=[BiocGenerics GenomeInfoDb IRanges S4Vectors XVector]; };
  GenomicScores = derive2 { name="GenomicScores"; version="2.16.0"; sha256="11sabicr2jm1cc9rdjr6vjqhf0gd9d7k04qlfhcdssvh02f957ia"; depends=[AnnotationHub Biobase BiocFileCache BiocGenerics BiocManager Biostrings DelayedArray GenomeInfoDb GenomicRanges HDF5Array httr IRanges rhdf5 S4Vectors XML]; };
  GenomicSuperSignature = derive2 { name="GenomicSuperSignature"; version="1.12.0"; sha256="0prplxp7l7hx6697a18kk2s5iyrdgpqwfh79n9lnala2h2q3vhs0"; depends=[Biobase BiocFileCache ComplexHeatmap dplyr flextable ggplot2 ggpubr irlba plotly S4Vectors SummarizedExperiment]; };
  GenomicTuples = derive2 { name="GenomicTuples"; version="1.38.0"; sha256="04inysn0aa2fmbnb01zk300x8qgz8bk4rhw68ka6ni7cbrn88ysa"; depends=[BiocGenerics data_table GenomeInfoDb GenomicRanges IRanges Rcpp S4Vectors]; };
  GeoDiff = derive2 { name="GeoDiff"; version="1.10.0"; sha256="17mm22cgq0259r15d49gv07igr8dpasylrnhsycx6mjg75zvz6jp"; depends=[Biobase GeomxTools lme4 Matrix NanoStringNCTools plyr Rcpp RcppArmadillo robust roptim testthat withr]; };
  GeoTcgaData = derive2 { name="GeoTcgaData"; version="2.4.0"; sha256="0hhhwnswjglxws75iqcn2sa66z9mr65n23p5i7c615n5qzrvcmw3"; depends=[cqn data_table plyr SummarizedExperiment topconfects]; };
  GeomxTools = derive2 { name="GeomxTools"; version="3.8.0"; sha256="093900a8himdfh752ah2wk9x5iczri0f3djsfi2mwzkb7frxpj0c"; depends=[Biobase BiocGenerics data_table dplyr EnvStats GGally ggplot2 lmerTest NanoStringNCTools readxl reshape2 rjson rlang S4Vectors SeuratObject stringr]; };
  GladiaTOX = derive2 { name="GladiaTOX"; version="1.20.0"; sha256="0krgsih0w60sl0gw1rpff89piv3mf1sk86hmlqjxl6idag8n2jil"; depends=[brew data_table DBI ggplot2 ggrepel numDeriv RColorBrewer RCurl RJSONIO RMariaDB RSQLite stringr tidyr XML xtable]; };
  Glimma = derive2 { name="Glimma"; version="2.14.0"; sha256="1d7rq3irp3n0fabfgjs2x2c9lscz70a38qf3wbxvi417qn7fpyla"; depends=[DESeq2 edgeR htmlwidgets jsonlite limma S4Vectors SummarizedExperiment]; };
  GloScope = derive2 { name="GloScope"; version="1.2.0"; sha256="0gdr5ws5p1xj4ip9xk10igrlwdr10x11j0wsfkr0f0y6352f2gm6"; depends=[BiocParallel FNN ggplot2 MASS mclust mvnfast RANN rlang SingleCellExperiment]; };
  GlobalAncova = derive2 { name="GlobalAncova"; version="4.22.0"; sha256="0z71a5h4y740k0hx84aavfxl1kpshm4gqs7mh6zf895i2r761bqh"; depends=[annotate AnnotationDbi Biobase corpcor dendextend globaltest GSEABase VGAM]; };
  GmicR = derive2 { name="GmicR"; version="1.18.0"; sha256="19zn4n21rprfhx8zmpcl7n5jyfhdz450b9dgw1ayrnnr0w4bf67h"; depends=[AnnotationDbi ape bnlearn Category data_table doParallel DT foreach GOstats gRain gRbase GSEABase org_Hs_eg_db org_Mm_eg_db reshape2 shiny WGCNA]; };
  GrafGen = derive2 { name="GrafGen"; version="1.0.0"; sha256="180ag0wvbhmd1vsza5lfphdx8d2phcfa4lzisi5fbk6n4195g830"; depends=[cowplot dplyr GenomicRanges ggplot2 ggpubr plotly RColorBrewer rlang scales shiny stringr zlibbioc]; };
  GraphAT = derive2 { name="GraphAT"; version="1.76.0"; sha256="0mxsgd08qd7fb28gbbgx21vvd5sf3nn0ymrlshsdpsdya5vmmv3d"; depends=[graph MCMCpack]; };
  GraphAlignment = derive2 { name="GraphAlignment"; version="1.68.0"; sha256="0f8h0lhykjw2nwwvz4gics1nsv6vjzk6axsgj94zwf84j4igm9jd"; depends=[]; };
  GraphPAC = derive2 { name="GraphPAC"; version="1.46.0"; sha256="0dy3yn6vhgbvn0ygrkznhaylhaslyrnmlw5kmq0inqvl9y2yl277"; depends=[igraph iPAC RMallow TSP]; };
  GreyListChIP = derive2 { name="GreyListChIP"; version="1.36.0"; sha256="0dj3pcycnjll8z1r61l6gnjvq74w2l0glrx6hqwcqvk5j7ixcdz7"; depends=[BSgenome GenomeInfoDb GenomicAlignments GenomicRanges MASS Rsamtools rtracklayer SummarizedExperiment]; };
  Guitar = derive2 { name="Guitar"; version="2.20.0"; sha256="1agr3n787dqly09wy274v9dg52vdb0n0z3gdh2zsbklkbmayqxqy"; depends=[AnnotationDbi dplyr GenomicFeatures GenomicRanges ggplot2 knitr magrittr rtracklayer]; };
  Gviz = derive2 { name="Gviz"; version="1.48.0"; sha256="07w37kq6zx99z980if4brwmw25vjgvxd8xj3l1893idbdf70py0p"; depends=[AnnotationDbi Biobase BiocGenerics biomaRt Biostrings biovizBase BSgenome digest ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges lattice latticeExtra matrixStats RColorBrewer Rsamtools rtracklayer S4Vectors XVector]; };
  HDF5Array = derive2 { name="HDF5Array"; version="1.32.0"; sha256="0j8rz99qw1rism3f5cv7rksccijmnchrkw7s9shxk0528f6dj6p1"; depends=[BiocGenerics DelayedArray IRanges Matrix rhdf5 rhdf5filters Rhdf5lib S4Arrays S4Vectors]; };
  HDTD = derive2 { name="HDTD"; version="1.38.0"; sha256="15lc2g6mcvgy0v0pjl9f1khhznpxc7ij8aimj20w2qaz1h6sqmpp"; depends=[Rcpp RcppArmadillo]; };
  HELP = derive2 { name="HELP"; version="1.62.0"; sha256="08g9xivzgwla4qvsca015d2hr2xbgiga9wd2xm5xphhb64lgzass"; depends=[Biobase]; };
  HEM = derive2 { name="HEM"; version="1.76.0"; sha256="091axqfgm8alz4k76b7ap1dl2cx7cim4l43zyvf91wimr6a13pbx"; depends=[Biobase]; };
  HERON = derive2 { name="HERON"; version="1.2.0"; sha256="0z8bsvsj1xa4r93y244381yckqk4mc39ij3pabcbn2mgbihcs94d"; depends=[cluster data_table GenomicRanges harmonicmeanp IRanges limma Matrix matrixStats metap S4Vectors spdep SummarizedExperiment]; };
  HGC = derive2 { name="HGC"; version="1.12.0"; sha256="10g4lmhs8brfrci6n28iarzwm4dlvsbysssv2n25l1rp8wnl2sip"; depends=[ape dendextend dplyr ggplot2 Matrix mclust patchwork RANN Rcpp RcppEigen]; };
  HIBAG = derive2 { name="HIBAG"; version="1.40.0"; sha256="1q059hqx0k9nm9xgxlzxnl93f44hjhjpf4iql0f87v560xzy1pgk"; depends=[RcppParallel]; };
  HIPPO = derive2 { name="HIPPO"; version="1.16.0"; sha256="1fp2jxi5xlf3archv3z8gnrc3rsh12vkprk6xhdffw9n2mqap56c"; depends=[dplyr ggplot2 ggrepel gridExtra irlba magrittr Matrix reshape2 rlang Rtsne SingleCellExperiment umap]; };
  HIREewas = derive2 { name="HIREewas"; version="1.22.0"; sha256="1kdiqa1g34i5gmnaxm6xc4r2wfb8ypmglrxfgv8l39l81698lp04"; depends=[gplots quadprog]; };
  HMMcopy = derive2 { name="HMMcopy"; version="1.46.0"; sha256="1i2n4i4vkxqfgdcmwhz1vcbhxk716m1blc2drzh5449y6x3qd026"; depends=[data_table]; };
  HPAanalyze = derive2 { name="HPAanalyze"; version="1.22.0"; sha256="1cm88rg43mwi6qqp0p48698z89niygy8zr0g1fk0s6cd5z2i6qpy"; depends=[dplyr ggplot2 gridExtra openxlsx tibble xml2]; };
  HPiP = derive2 { name="HPiP"; version="1.10.0"; sha256="1kjsa8q70zvmjqcvrpcijf7w6c5k21ysdd8pd8zsxwkvck174gih"; depends=[caret corrplot dplyr ggplot2 httr igraph magrittr MCL pROC protr PRROC purrr readr stringr tibble tidyr]; };
  HTSFilter = derive2 { name="HTSFilter"; version="1.44.0"; sha256="11pqfg2msdxi57326slgp73j4dshj5r730sv1x0n9f7fd2187his"; depends=[Biobase BiocParallel DESeq2 edgeR]; };
  HTSeqGenie = derive2 { name="HTSeqGenie"; version="4.34.0"; sha256="1np04hiijz9jdxvlg1mk74w19ma32qrdjb9bc5cscrs1lgw78idh"; depends=[BiocGenerics BiocParallel Biostrings Cairo chipseq GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges gmapR hwriter IRanges pwalign Rsamtools rtracklayer S4Vectors ShortRead SummarizedExperiment VariantAnnotation VariantTools]; };
  Harman = derive2 { name="Harman"; version="1.32.0"; sha256="1b6w8wrlsvxpzbsp4vkrpfvx4icbvncl11q4j773knz5q0q9l6q0"; depends=[Ckmeans_1d_dp matrixStats Rcpp]; };
  HarmonizR = derive2 { name="HarmonizR"; version="1.2.0"; sha256="1bjyfxhlsslns7jiaaivld56w9j1gavdnrbciil6kiqs2q63fpj9"; depends=[doParallel foreach janitor limma plyr seriation SummarizedExperiment sva]; };
  Harshlight = derive2 { name="Harshlight"; version="1.76.0"; sha256="1nqi2ad9hnm6j8hn8f6xp9zav6rsa5wlzb2z5fjnm9q4xbjblnjl"; depends=[affy altcdfenvs Biobase]; };
  Heatplus = derive2 { name="Heatplus"; version="3.12.0"; sha256="1pc63hk0smcflq4903hvs4pp8r0kzlx08j0m1kxlh14cxwppamyb"; depends=[RColorBrewer]; };
  HelloRanges = derive2 { name="HelloRanges"; version="1.30.0"; sha256="0idv6aravk0jj8p33kvc620p60ciyrkd293ba034g6j5921ym6gx"; depends=[BiocGenerics BiocIO Biostrings BSgenome docopt GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation]; };
  Herper = derive2 { name="Herper"; version="1.14.0"; sha256="0aj9gskx02p986n29cd1z5hrzp4qp5cvwki25vyafb805wf7v69v"; depends=[reticulate rjson withr]; };
  HiCBricks = derive2 { name="HiCBricks"; version="1.22.0"; sha256="0hbmy7vhg63n6r2lv8gvrlsj4xgqbf8mvaci2i4kpc9327jny2nn"; depends=[BiocParallel curl data_table digest GenomeInfoDb GenomicRanges ggplot2 IRanges jsonlite R_utils R6 RColorBrewer readr reshape2 rhdf5 S4Vectors scales stringr tibble viridis]; };
  HiCDCPlus = derive2 { name="HiCDCPlus"; version="1.12.0"; sha256="0x95v5h1qjks87gmis7p0y4bmj7xalqbgny0qfkaw8s561fhx3j9"; depends=[bbmle Biostrings BSgenome data_table dplyr GenomeInfoDb GenomicInteractions GenomicRanges InteractionSet IRanges MASS pscl R_utils Rcpp rlang rtracklayer S4Vectors tibble tidyr]; };
  HiCDOC = derive2 { name="HiCDOC"; version="1.6.0"; sha256="1p8n3yljzlk8ic47101nw8d6dmxgadacgfh6pknkpxgk6vlcq6kh"; depends=[BiocGenerics BiocParallel cowplot data_table GenomeInfoDb GenomicRanges ggplot2 gridExtra gtools InteractionSet multiHiCcompare pbapply Rcpp S4Vectors SummarizedExperiment zlibbioc]; };
  HiCExperiment = derive2 { name="HiCExperiment"; version="1.4.0"; sha256="0wz08jwljv8zc658xl55rwwsfvy3lc3qg9dw7d41cw37wh40dkw1"; depends=[BiocGenerics BiocIO BiocParallel dplyr GenomeInfoDb GenomicRanges InteractionSet IRanges Matrix rhdf5 S4Vectors strawr vroom]; };
  HiCcompare = derive2 { name="HiCcompare"; version="1.26.0"; sha256="1rpdqij0lvs9cyl1z5lgw91332km1nb8053kk432bais9382jkxc"; depends=[BiocParallel data_table dplyr GenomicRanges ggplot2 gridExtra gtools InteractionSet IRanges KernSmooth mgcv pheatmap rhdf5 S4Vectors]; };
  HiContacts = derive2 { name="HiContacts"; version="1.6.0"; sha256="18rfv9z03dqdqifrxqv1l3m9s8nykygd9y6d7pya2sdfx8f0hgza"; depends=[BiocGenerics BiocIO BiocParallel dplyr GenomeInfoDb GenomicRanges ggplot2 ggrastr HiCExperiment InteractionSet IRanges Matrix readr RSpectra S4Vectors scales stringr SummarizedExperiment tibble tidyr]; };
  HiCool = derive2 { name="HiCool"; version="1.4.0"; sha256="06b26szb23mngcfx5xwdw6kz10gqjs69py0iz5piia4a7vppk8zk"; depends=[basilisk BiocIO dplyr GenomicRanges HiCExperiment InteractionSet IRanges plotly reticulate rmarkdown rmdformats S4Vectors sessioninfo stringr vroom]; };
  HiLDA = derive2 { name="HiLDA"; version="1.18.0"; sha256="1v5gvb84q09l8i7f1d4q7zpyxlzaq5bqifia706d60700wvfan29"; depends=[abind BiocGenerics Biostrings BSgenome_Hsapiens_UCSC_hg19 cowplot forcats GenomicFeatures GenomicRanges ggplot2 R2jags Rcpp S4Vectors stringr tidyr TxDb_Hsapiens_UCSC_hg19_knownGene XVector]; };
  HiTC = derive2 { name="HiTC"; version="1.48.0"; sha256="0nxk3rdfw78bwyxjd3bbm093i8hqyk63rz0fvx3fi04qpa1fv39r"; depends=[Biostrings GenomeInfoDb GenomicRanges IRanges Matrix RColorBrewer rtracklayer]; };
  HicAggR = derive2 { name="HicAggR"; version="1.0.2"; sha256="1lpf7m3rsm3ng0i6gqyl6l3jvawnl8wcfjl0gkxz604bwszjvhb3"; depends=[BiocGenerics BiocParallel checkmate data_table dplyr GenomeInfoDb GenomicRanges ggplot2 gridExtra InteractionSet IRanges Matrix purrr reshape rhdf5 rlang rtracklayer S4Vectors strawr stringr tibble tidyr withr]; };
  HilbertCurve = derive2 { name="HilbertCurve"; version="1.34.0"; sha256="0kka2haa84kv2xwqny0ii0mfq0gjdh4vv1zkjk0lbqszqk1h6hab"; depends=[circlize GenomicRanges HilbertVis IRanges png polylabelr]; };
  HilbertVis = derive2 { name="HilbertVis"; version="1.62.0"; sha256="07ndnzqjpklr3k9bbnl9y7jpb91ng1wkssb4kqaxp5nsc2ixidpd"; depends=[lattice]; };
  HilbertVisGUI = derive2 { name="HilbertVisGUI"; version="1.62.0"; sha256="0mzb9yb9f5d6yr8889cn8n20br5mf07xg97q09hxxhxgy8pq33mf"; depends=[HilbertVis]; };
  HubPub = derive2 { name="HubPub"; version="1.12.0"; sha256="02xqw3xkhzk2fxx4l1h5gl5v0diamssr1dw9x871glxjl4kw07xm"; depends=[available aws_s3 BiocManager biocthis dplyr fs usethis]; };
  HumanTranscriptomeCompendium = derive2 { name="HumanTranscriptomeCompendium"; version="1.20.0"; sha256="1y46zsl08k6sdih8psar85fyc5dfk2vraxmfry70zx57vbjbin92"; depends=[BiocManager S4Vectors shiny ssrch SummarizedExperiment]; };
  HybridExpress = derive2 { name="HybridExpress"; version="1.0.0"; sha256="1cpvw6ycbh60wn39ws0l6hrgy9x97glb56f87sn2qg9li6hxjshh"; depends=[BiocParallel ComplexHeatmap DESeq2 ggplot2 patchwork RColorBrewer rlang SummarizedExperiment]; };
  HybridMTest = derive2 { name="HybridMTest"; version="1.48.0"; sha256="0fh0v29fpwzramqnbxmzpmgiziwswdx38734g2lx303b0blkbv7j"; depends=[Biobase fdrtool MASS survival]; };
  IFAA = derive2 { name="IFAA"; version="1.6.0"; sha256="1y2vsz14d5a22m21n7zmfm64ffvh8hq0hkwnr44ifysy4zfmjg0x"; depends=[DescTools doParallel doRNG foreach glmnet HDCI mathjaxr Matrix MatrixExtra parallelly S4Vectors stringr SummarizedExperiment]; };
  IHW = derive2 { name="IHW"; version="1.32.0"; sha256="0j7rfyhpzr8zzyvjyphlfviy07z30nzsqq6isi4l0r4qgaziy1s6"; depends=[BiocGenerics fdrtool lpsymphony slam]; };
  ILoReg = derive2 { name="ILoReg"; version="1.14.0"; sha256="1zw6m2a5jr77mbjbzc966v98pdfw2s0sg1sqssdf7qsb0izj10b0"; depends=[aricode cluster cowplot dendextend DescTools doRNG doSNOW dplyr fastcluster foreach ggplot2 LiblineaR Matrix parallelDist pheatmap plyr reshape2 RSpectra Rtsne S4Vectors scales SingleCellExperiment SparseM SummarizedExperiment umap]; };
  IMAS = derive2 { name="IMAS"; version="1.28.0"; sha256="1n55qs4v5x7clpbhlrby5dcz9xldqrsfp6g4k6g0s1g0lk2rplqm"; depends=[AnnotationDbi BiocGenerics BiocParallel doParallel foreach GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggfortify ggplot2 gridExtra IRanges IVAS lattice lme4 Matrix Rsamtools S4Vectors survival]; };
  IMMAN = derive2 { name="IMMAN"; version="1.24.0"; sha256="1yn0p53ar9b9g5d2gfyd70cp7vm69fsgn8av9lvc6qyac18w9y5j"; depends=[igraph pwalign seqinr STRINGdb]; };
  IMPCdata = derive2 { name="IMPCdata"; version="1.40.0"; sha256="0s0zap78lwgava7k3dng8hjpd1zifh9438iqfqghydq8scyr3akc"; depends=[rjson]; };
  INDEED = derive2 { name="INDEED"; version="2.18.0"; sha256="0ky21l4igsfznzq8is8apjhiasxryn8sjhjqjnpp1z8m7q93a0sf"; depends=[devtools glasso igraph visNetwork]; };
  INPower = derive2 { name="INPower"; version="1.40.0"; sha256="1w3gjw1avjpvnqy5ladypkr862jqd910zi74ah8rdfzid4r79klm"; depends=[mvtnorm]; };
  INSPEcT = derive2 { name="INSPEcT"; version="1.34.0"; sha256="0147ss218d3dnqbdgfwsg24an63qln8l5kkv0y4hm56bncdrm1i0"; depends=[Biobase BiocGenerics BiocParallel DESeq2 deSolve GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges KernSmooth plgem pROC readxl rootSolve Rsamtools rtracklayer S4Vectors shiny SummarizedExperiment TxDb_Mmusculus_UCSC_mm9_knownGene]; };
  INTACT = derive2 { name="INTACT"; version="1.4.0"; sha256="1r1v8cvms0dyjf0f5f9v6qp7hz0rfb2yfbckvvrkq26yjwfbmlaa"; depends=[bdsmatrix numDeriv SQUAREM tidyr]; };
  IONiseR = derive2 { name="IONiseR"; version="2.28.0"; sha256="1ihski4akl70v6kq03di6w1pz63dx6rxgmyjkm0dv0nhgkmrza22"; depends=[BiocGenerics BiocParallel Biostrings bit64 dplyr ggplot2 magrittr rhdf5 ShortRead stringr tibble tidyr XVector]; };
  IPO = derive2 { name="IPO"; version="1.30.0"; sha256="0sh4ajra67j2v359022s4cm2vfc0i9wjagcjv8jh1jf5jq70dyfh"; depends=[BiocParallel CAMERA rsm xcms]; };
  IRanges = derive2 { name="IRanges"; version="2.38.0"; sha256="047688hrxyg2hxd1wbywxqnvxk1622xlldzana9g5hhxg9lldrk2"; depends=[BiocGenerics S4Vectors]; };
  ISAnalytics = derive2 { name="ISAnalytics"; version="1.14.0"; sha256="05khils483a1d64ikg4j5vl3rcwsjgik04b75a6rr3crkdba7fl4"; depends=[bslib datamods dplyr DT forcats fs ggplot2 ggrepel glue lifecycle lubridate purrr readr readxl rlang shiny shinyWidgets stringr tibble tidyr]; };
  ISLET = derive2 { name="ISLET"; version="1.6.0"; sha256="0vhpxr0civdhcxiy39aycir8a68vgrydv3nx1p9rn4hhpw7dq7gi"; depends=[abind BiocGenerics BiocParallel lme4 Matrix nnls purrr SummarizedExperiment]; };
  ISoLDE = derive2 { name="ISoLDE"; version="1.32.0"; sha256="1yq7h8jjapjr7j9f2p4ikkvxh46vz4y7pdwddsi4dx7xkfjhzxmm"; depends=[]; };
  ITALICS = derive2 { name="ITALICS"; version="2.64.0"; sha256="06h6iqrqzlcj4hyhj1ikl9isr3ls1pph49v5n7cp87czinr0nd3s"; depends=[affxparser DBI GLAD ITALICSData oligo oligoClasses pd_mapping50k_xba240]; };
  IVAS = derive2 { name="IVAS"; version="2.24.0"; sha256="15l0qga9a4q79y1r3pwcv3c0m0qpyjay3fvv7b4zwx7hvmkjfy1b"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel doParallel foreach GenomeInfoDb GenomicFeatures GenomicRanges ggfortify ggplot2 IRanges lme4 Matrix S4Vectors]; };
  IWTomics = derive2 { name="IWTomics"; version="1.28.0"; sha256="0ksmpa6f5zlgdhma1vxsfd64g7jhisffg5sbnz2xhf7faz14gc08"; depends=[fda GenomicRanges gtable IRanges KernSmooth S4Vectors]; };
  Icens = derive2 { name="Icens"; version="1.76.0"; sha256="16bblkxp8pj7qaxfzmp30lfj8vy13d3q8cf5y0g40lk4rbldx3bz"; depends=[survival]; };
  IdeoViz = derive2 { name="IdeoViz"; version="1.40.0"; sha256="0mq8qdhi2ccfa66rygn83hpm0fsmwiahpmrh8q522yl618mkrjcs"; depends=[Biobase GenomeInfoDb GenomicRanges IRanges RColorBrewer rtracklayer]; };
  IgGeneUsage = derive2 { name="IgGeneUsage"; version="1.18.0"; sha256="0b2bndc36yd0a4yi2z3870g1b9c1ddpwp44gl42ysk29qwis2yi6"; depends=[BH Rcpp RcppEigen RcppParallel reshape2 rstan rstantools StanHeaders SummarizedExperiment tidyr]; };
  InPAS = derive2 { name="InPAS"; version="2.12.0"; sha256="05hzd8rixqz5d86d4gv7wh68kfbiynbp2xij9r2nj0h90av0h95b"; depends=[AnnotationDbi batchtools Biobase Biostrings BSgenome cleanUpdTSeq depmixS4 dplyr flock future future_apply GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 IRanges limma magrittr parallelly plyranges preprocessCore readr reshape2 RSQLite S4Vectors]; };
  InTAD = derive2 { name="InTAD"; version="1.24.0"; sha256="16npavms8qxccldpik27qbsv3w0drcjr132nz2ky2cvi01bcp4l2"; depends=[Biobase BiocGenerics GenomicRanges ggplot2 ggpubr IRanges mclust MultiAssayExperiment qvalue rtracklayer S4Vectors SummarizedExperiment]; };
  Informeasure = derive2 { name="Informeasure"; version="1.14.0"; sha256="0v4wy0gyap9w38a505hhhv1apmixazd4la8wjspdx718az92igg3"; depends=[entropy]; };
  IntEREst = derive2 { name="IntEREst"; version="1.28.0"; sha256="0i6q422vhf94ka0v69hs5irg506wb467rwnnn12xvsfyq54ak4dm"; depends=[BiocGenerics BiocParallel Biostrings DBI DESeq2 DEXSeq edgeR GenomicAlignments GenomicFeatures GenomicFiles GenomicRanges IRanges RMySQL Rsamtools S4Vectors seqinr seqLogo SummarizedExperiment txdbmaker]; };
  InterCellar = derive2 { name="InterCellar"; version="2.10.0"; sha256="020z08v199psgcl4z3kbwl1zgp10iwn5n60c4bq555fz6nbjb56n"; depends=[biomaRt circlize colorspace colourpicker ComplexHeatmap config data_table dendextend dplyr DT factoextra fmsb fs ggplot2 golem htmltools htmlwidgets igraph plotly plyr readxl rlang scales shiny shinyalert shinycssloaders shinydashboard shinyFeedback shinyFiles signal tibble tidyr umap visNetwork wordcloud2]; };
  InterMineR = derive2 { name="InterMineR"; version="1.26.0"; sha256="0isw4rg89139xmrcfb9r7jc3z8jj1my4radhinah0vad2cwb36l0"; depends=[Biostrings GenomicRanges httr igraph IRanges RCurl RJSONIO S4Vectors sqldf SummarizedExperiment XML xml2]; };
  InteractionSet = derive2 { name="InteractionSet"; version="1.32.0"; sha256="0ikkmhz6grmhksmyypj9hqmblls4cgww0dx4kzg4cy5bpavsq1hs"; depends=[BiocGenerics GenomeInfoDb GenomicRanges IRanges Matrix Rcpp S4Vectors SummarizedExperiment]; };
  InteractiveComplexHeatmap = derive2 { name="InteractiveComplexHeatmap"; version="1.12.0"; sha256="0sfhr3f7fdw9zgw2wn7dhk1zwmhn3k3iy8xa0j9dv7bpa2mcvw1b"; depends=[clisymbols ComplexHeatmap digest fontawesome GetoptLong htmltools IRanges jsonlite kableExtra RColorBrewer S4Vectors shiny svglite]; };
  IntramiRExploreR = derive2 { name="IntramiRExploreR"; version="1.26.0"; sha256="19q6znbmqj4i6k60c5f05y7s7rp9h3ra3081ra3fc5p2b74gb6cv"; depends=[FGNet igraph knitr]; };
  IsoBayes = derive2 { name="IsoBayes"; version="1.2.0"; sha256="19vga38f9srbsb6vglb0ni33cfrzrn5z94d0v4apnki4r6plp2k2"; depends=[data_table doParallel doRNG foreach ggplot2 glue HDInterval iterators Rcpp RcppArmadillo S4Vectors SummarizedExperiment]; };
  IsoCorrectoR = derive2 { name="IsoCorrectoR"; version="1.22.0"; sha256="19h5wndzj3sgvhb7blx07pjammh05kwp5vwjv0drvlj829pqhkia"; depends=[dplyr magrittr pracma quadprog readr readxl stringr tibble WriteXLS]; };
  IsoCorrectoRGUI = derive2 { name="IsoCorrectoRGUI"; version="1.20.0"; sha256="1zwnp50sargc3991v22sj7hg01c1ddqi487xmvj5in7yjccys2dm"; depends=[IsoCorrectoR readxl tcltk2]; };
  IsoformSwitchAnalyzeR = derive2 { name="IsoformSwitchAnalyzeR"; version="2.4.0"; sha256="0mmxyq1r4kq1igj108pr0r9215hwmyph5svx0djd460knak24y6z"; depends=[Biobase BiocGenerics BiocParallel Biostrings BSgenome DBI DEXSeq dplyr edgeR futile_logger GenomeInfoDb GenomicRanges ggplot2 gridExtra IRanges limma magrittr pfamAnalyzeR plyr pwalign RColorBrewer RCurl readr reshape2 rtracklayer S4Vectors satuRn stringr SummarizedExperiment sva tibble tidyr tximeta tximport VennDiagram XVector]; };
  KBoost = derive2 { name="KBoost"; version="1.12.0"; sha256="0xmnfcfvlmwgs01k81dkksgia93dvyph6kdacn9gnpl3559q5ilg"; depends=[]; };
  KCsmart = derive2 { name="KCsmart"; version="2.62.0"; sha256="0qc8kp5y9dcq23wsqpbin9hds1j5jnq3w255rg3k0ni1iq95c6m4"; depends=[BiocGenerics KernSmooth multtest siggenes]; };
  KEGGREST = derive2 { name="KEGGREST"; version="1.44.0"; sha256="1xvi11ywr3vj2m8fpqblzg2pmj1vsc0dm8fgggv6w96l6x6sfyf0"; depends=[Biostrings httr png]; };
  KEGGgraph = derive2 { name="KEGGgraph"; version="1.64.0"; sha256="0lffqbvwmfjbw5ymxr969znvb53hbqfgq1zwffsc768rv3h4c6p7"; depends=[graph RCurl Rgraphviz XML]; };
  KEGGlincs = derive2 { name="KEGGlincs"; version="1.30.0"; sha256="0jxa42ax4r991vc2cqjdzyfwknf5929xyvlpimra3fbpgpp8sjpg"; depends=[AnnotationDbi gtools hgu133a_db httr igraph KEGGgraph KEGGREST KOdata org_Hs_eg_db plyr RJSONIO XML]; };
  KinSwingR = derive2 { name="KinSwingR"; version="1.22.0"; sha256="0dlqwi2a9hbl4nh6kp4bxv3acvnvmgg5ssbymvf2k8ng4g1kxi3r"; depends=[BiocParallel data_table sqldf]; };
  KnowSeq = derive2 { name="KnowSeq"; version="1.18.0"; sha256="1iv6cghkq0qi0d2fsj9x74jzvf1zrrknc3kx1b1xpa7lc0x11ym4"; depends=[caret cqn e1071 edgeR ggplot2 gridExtra Hmisc httr jsonlite kernlab limma praznik R_utils randomForest reshape2 rlist rmarkdown stringr sva XML]; };
  LACE = derive2 { name="LACE"; version="2.8.0"; sha256="07izkiljmq0rbrijsgv45qvpp4zmaw78qqavzbvaw729pl172haz"; depends=[biomaRt bsplus callr configr curl data_table data_tree doParallel dplyr DT forcats foreach fs ggplot2 htmltools htmlwidgets igraph jsonlite logr Matrix purrr RColorBrewer readr Rfast shiny shinyBS shinydashboard shinyFiles shinyjs shinythemes shinyvalidate sortable stringi stringr SummarizedExperiment svglite tidyr]; };
  LBE = derive2 { name="LBE"; version="1.72.0"; sha256="03vmsblzh5vw8p8xdd39cbl714rq1nh4wqflprsmpnyd1gkn8p4z"; depends=[]; };
  LEA = derive2 { name="LEA"; version="3.16.0"; sha256="0r6nj6ck77fhbmqifbx4srj1f3yr7haiinphcm0p4g8b7zn4a6fm"; depends=[]; };
  LOBSTAHS = derive2 { name="LOBSTAHS"; version="1.30.0"; sha256="0r5s92jfvavxg6amml14lfqv9azshdf6vq7pyf9izbd79whxr6wn"; depends=[CAMERA xcms]; };
  LOLA = derive2 { name="LOLA"; version="1.34.0"; sha256="1i5axxzdwl6j1cgxfdfnaisv6bj4qbrhic5ba2k3wbhkgr144xcc"; depends=[BiocGenerics data_table GenomicRanges IRanges reshape2 S4Vectors]; };
  LPE = derive2 { name="LPE"; version="1.78.0"; sha256="1a2bgk3a1irf45rda1dnbq0gak8ldw328ibvhp10fcj2dyvd53rx"; depends=[]; };
  LRBaseDbi = derive2 { name="LRBaseDbi"; version="2.14.0"; sha256="11h41iq3ivbyrd2xrhphryqkrfdyr8j8hjdyjbbfsxhq8b4pxz9a"; depends=[AnnotationDbi Biobase DBI RSQLite]; };
  LRcell = derive2 { name="LRcell"; version="1.12.0"; sha256="129wwaa6ppayyirlyra720a2yhabvihy11yfbr3yddnk7jzgzm8a"; depends=[AnnotationHub BiocParallel dplyr ExperimentHub ggplot2 ggrepel magrittr]; };
  LedPred = derive2 { name="LedPred"; version="1.38.0"; sha256="1ziw6ya46s55gynlrl8dh6p3n0l1m01b0q6b9y6fc13pknjjbarh"; depends=[akima e1071 ggplot2 irr jsonlite plot3D plyr RCurl ROCR testthat]; };
  LinTInd = derive2 { name="LinTInd"; version="1.8.0"; sha256="01ij93fylp7bch2rywz31bpbhdgi8cbsn8nngsp730pd3pyw8mpf"; depends=[ape BiocGenerics Biostrings cowplot data_tree dplyr ggnewscale ggplot2 ggtree IRanges networkD3 pheatmap purrr pwalign reshape2 rlist S4Vectors stringdist stringr]; };
  LinkHD = derive2 { name="LinkHD"; version="1.18.0"; sha256="00vfzs3121l4bqy3mb4pblfjcna5zaa4iqrzrz9pfkwm2wcf2zis"; depends=[cluster data_table emmeans ggplot2 ggpubr gridExtra MultiAssayExperiment reshape2 rio scales vegan]; };
  Linnorm = derive2 { name="Linnorm"; version="2.28.0"; sha256="1la6fwaap7957rrb4cs6w48kjz4hqrw3h39lpps419d4cbnsp5jz"; depends=[amap apcluster ellipse fastcluster fpc ggdendro ggplot2 gmodels igraph limma MASS mclust Rcpp RcppArmadillo Rtsne statmod vegan zoo]; };
  LiquidAssociation = derive2 { name="LiquidAssociation"; version="1.58.0"; sha256="0hgr074a4q64cyw2dbc3ncm9rwkv0d2fs5wzlkacr956wv3zzxld"; depends=[Biobase geepack org_Sc_sgd_db yeastCC]; };
  LoomExperiment = derive2 { name="LoomExperiment"; version="1.22.0"; sha256="12xx78pbfdhh1iprm8vfbnwi3dm7slf47y5a6p78spnhsykb3ris"; depends=[BiocIO DelayedArray GenomicRanges HDF5Array Matrix rhdf5 S4Vectors SingleCellExperiment stringr SummarizedExperiment]; };
  LymphoSeq = derive2 { name="LymphoSeq"; version="1.32.0"; sha256="0km3k6sbcb573mk0wb6hq1xqmbkksnvkv8mx5b9jqr4r840lh909"; depends=[Biostrings circlize data_table dplyr ggplot2 ggtree ineq LymphoSeqDB msa phangorn plyr RColorBrewer reshape stringdist UpSetR VennDiagram]; };
  M3C = derive2 { name="M3C"; version="1.26.0"; sha256="1h3zxb3m68lq37g25zqxpmk2c9yrdhydyhh7ad2d30hif73qiacm"; depends=[cluster corpcor doParallel doSNOW foreach ggplot2 Matrix matrixcalc Rtsne umap]; };
  M3Drop = derive2 { name="M3Drop"; version="1.30.0"; sha256="1ksdr7p517sidp99kl4bjy88i18c7hxgd7zlrj4h0zrvy3fjh1r4"; depends=[bbmle gplots Hmisc irlba Matrix matrixStats numDeriv RColorBrewer reldist scater statmod]; };
  MACSQuantifyR = derive2 { name="MACSQuantifyR"; version="1.18.0"; sha256="0f46dgp5cjakc97zb7rz2fnx5bzb78qfbw2fdc30jv1c9zn849f1"; depends=[ggplot2 ggrepel gridExtra lattice latticeExtra png prettydoc readxl rmarkdown rvest xml2]; };
  MACSr = derive2 { name="MACSr"; version="1.12.0"; sha256="04qra9rwj3f259k2f8h1v8g8cnkm2ryrr84rq6pmkr9ax0wbym63"; depends=[AnnotationHub basilisk ExperimentHub reticulate S4Vectors]; };
  MADSEQ = derive2 { name="MADSEQ"; version="1.30.0"; sha256="0b15wg8nsavl2994clrv72rl6qn5b8pbxk1wqwqcrdab832pd4m7"; depends=[Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 coda GenomeInfoDb GenomicAlignments GenomicRanges IRanges preprocessCore rjags Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation vcfR VGAM zlibbioc]; };
  MAGAR = derive2 { name="MAGAR"; version="1.12.0"; sha256="10ki05dffrc9b4ghwjlcc51m9zviyffsldwp5w6m740y9gd0hjcg"; depends=[argparse bigstatsr crlmm data_table doParallel ff HDF5Array igraph impute jsonlite plyr reshape2 rjson RnBeads RnBeads_hg19 RnBeads_hg38 snpStats UpSetR]; };
  MAGeCKFlute = derive2 { name="MAGeCKFlute"; version="2.8.0"; sha256="1fbwd1wi9z6fgq2whqazyqwm71j7h87dcv4vh3f23yzxm337qpiy"; depends=[Biobase clusterProfiler depmap DOSE enrichplot ggplot2 ggrepel gridExtra msigdbr pathview reshape2]; };
  MAI = derive2 { name="MAI"; version="1.10.0"; sha256="0fj5q9bbwazicncyxn7940jxkka1m76327cgwl3skj8a1xr6nlfq"; depends=[caret doParallel e1071 foreach future future_apply missForest pcaMethods S4Vectors SummarizedExperiment tidyverse]; };
  MAIT = derive2 { name="MAIT"; version="1.38.0"; sha256="0b33n6n3v88rad6ndpldsz3kb3l35fq7w6vqm5fzd9nxn9h5ayws"; depends=[agricolae CAMERA caret class e1071 gplots MASS pls plsgenomics Rcpp xcms]; };
  MANOR = derive2 { name="MANOR"; version="1.76.0"; sha256="0mlhv4gy4bxvdm0drwwrm4x48wy0mghzcqhvaw2rhw0h65rmy5ps"; depends=[GLAD]; };
  MAPFX = derive2 { name="MAPFX"; version="1.0.0"; sha256="16iqj70hhsgvnlb8g9z42xplfdsryzlc9cq4ndky01izmqi0ybvx"; depends=[Biobase circlize ComplexHeatmap cowplot e1071 flowCore ggplot2 glmnetUtils gtools iCellR igraph pbapply RColorBrewer reshape2 Rfast stringr uwot xgboost]; };
  MAST = derive2 { name="MAST"; version="1.30.0"; sha256="1k8an0ifcgx54lqzpim3q37y4rhv57i94i46dlpmdyfghqqw0fny"; depends=[abind Biobase BiocGenerics data_table ggplot2 Matrix plyr progress reshape2 S4Vectors SingleCellExperiment stringr SummarizedExperiment]; };
  MBASED = derive2 { name="MBASED"; version="1.38.0"; sha256="1gh12y9l87g01s8f60g82k43pjm4i7zan0l1xnw042qiskz6x92h"; depends=[BiocGenerics BiocParallel GenomicRanges RUnit SummarizedExperiment]; };
  MBAmethyl = derive2 { name="MBAmethyl"; version="1.38.0"; sha256="05p05qp8g23l1c4i9vnkysq1srnzpiq8wc45zzg80hms3ab5qdzp"; depends=[]; };
  MBCB = derive2 { name="MBCB"; version="1.58.0"; sha256="17m8ajwffjl6ldzmlq79hj9s0nkjparpks685jjgmw8gx80q3ln1"; depends=[preprocessCore tcltk2]; };
  MBECS = derive2 { name="MBECS"; version="1.8.0"; sha256="15nv5rbw158d071gscms6p42wzf6ibnabiqcq256rcz6j0r69b63"; depends=[cluster dplyr ggplot2 gridExtra limma lme4 lmerTest magrittr Matrix pheatmap phyloseq rmarkdown ruv sva tibble tidyr vegan]; };
  MBQN = derive2 { name="MBQN"; version="2.16.0"; sha256="0c5knn15yiki5vi6ln5f0r4hkq3bnv8da5yqflgbgqwn7fn277cr"; depends=[BiocFileCache ggplot2 limma PairedData preprocessCore rappdirs RCurl rmarkdown SummarizedExperiment xml2]; };
  MBttest = derive2 { name="MBttest"; version="1.32.0"; sha256="0qfl0qaw99b1q8j7fq8f1vdkxsjjp6flrg3vwr3bksfi5z58hpzz"; depends=[gplots gtools]; };
  MCbiclust = derive2 { name="MCbiclust"; version="1.28.0"; sha256="1alz583dnmm9xvby1fcfkz2pxach6saj2ni5qma1r31ac4sx0b3l"; depends=[AnnotationDbi BiocParallel cluster GGally ggplot2 GO_db org_Hs_eg_db scales WGCNA]; };
  MDTS = derive2 { name="MDTS"; version="1.24.0"; sha256="16mm79gqqwpjfhmx0ppidg05gk7hbzw2d0hgxx9fzpfaixkx2k7p"; depends=[Biostrings DNAcopy GenomicAlignments GenomicRanges IRanges Rsamtools stringr]; };
  MEAL = derive2 { name="MEAL"; version="1.34.0"; sha256="1njqd9546ggnncmnri8nm9h2cq1wrq075fpng86d994zpgvq2xn8"; depends=[Biobase BiocGenerics GenomicRanges ggplot2 Gviz IRanges isva limma matrixStats minfi missMethyl MultiDataSet permute S4Vectors SmartSVA SummarizedExperiment vegan]; };
  MEAT = derive2 { name="MEAT"; version="1.16.0"; sha256="0qq5k0xc7vsc32nh6f1qw4cy960rh43a8caqpjprvkfgp9mbvxfg"; depends=[dplyr dynamicTreeCut glmnet impute minfi RPMM stringr SummarizedExperiment tibble wateRmelon]; };
  MEB = derive2 { name="MEB"; version="1.18.0"; sha256="18vhf7f0jx13b8vs4kgm2qli3xxinv9rcm4r8xfd9p1ldmmbh6bn"; depends=[e1071 edgeR scater SingleCellExperiment SummarizedExperiment wrswoR]; };
  MEDIPS = derive2 { name="MEDIPS"; version="1.56.0"; sha256="0lv4x4ms3gabin47lv08rl2igddnr2r9d5xf3w1zaz8d2fj1k1wq"; depends=[biomaRt Biostrings BSgenome DNAcopy edgeR GenomicRanges gtools IRanges preprocessCore Rsamtools rtracklayer]; };
  MEDME = derive2 { name="MEDME"; version="1.64.0"; sha256="1zqqbb36qy1ad3fp2b29wm94g0qj95p8aj4jskkj7zca5j01jvzr"; depends=[Biostrings drc MASS]; };
  MEIGOR = derive2 { name="MEIGOR"; version="1.38.0"; sha256="05k3n6zr75hd76l7v19i88hp0y7x2k2x4nhdwx86ya9gp8xad069"; depends=[CNORode deSolve Rsolnp snowfall]; };
  MGFM = derive2 { name="MGFM"; version="1.38.0"; sha256="0f6j2bq0zv2lfypd4wbbmapgs132k7yzjw11h9rs6c4llhlk5ns2"; depends=[annotate AnnotationDbi]; };
  MGFR = derive2 { name="MGFR"; version="1.30.0"; sha256="07g01scd15zprm6ygvj9pjrsj553vk073mjyqvnk6pxy97r7slfa"; depends=[annotate biomaRt]; };
  MGnifyR = derive2 { name="MGnifyR"; version="1.0.0"; sha256="0siqjril79bcbs90v7ng1j2rzrs4nl5y4wv1ih2cgp464n8agh6a"; depends=[ape BiocGenerics dplyr httr mia MultiAssayExperiment plyr reshape2 S4Vectors SummarizedExperiment tidyjson TreeSummarizedExperiment urltools]; };
  MICSQTL = derive2 { name="MICSQTL"; version="1.2.2"; sha256="141dgc7k28ig9yw6km7ahjp0zyshg4kp3f6bs0ixnv6566dlb4c9"; depends=[BiocParallel dirmult ggplot2 ggpubr ggridges glue magrittr nnls purrr S4Vectors SummarizedExperiment TCA TOAST]; };
  MIRA = derive2 { name="MIRA"; version="1.26.0"; sha256="05s4wm7cnjyb1sg6zawp5rxj23ym5kkh95cj79k6cx6l0fb946c0"; depends=[Biobase BiocGenerics bsseq data_table GenomicRanges ggplot2 IRanges S4Vectors]; };
  MIRit = derive2 { name="MIRit"; version="1.0.0"; sha256="1c6zz24l2l362lkyha9ls7a990dpvpxskyzxz755zkf0q4cpdyn4"; depends=[AnnotationDbi BiocFileCache BiocParallel DESeq2 edgeR fgsea genekitr geneset ggplot2 ggpubr graph graphite httr limma MultiAssayExperiment Rcpp readxl Rgraphviz rlang]; };
  MLInterfaces = derive2 { name="MLInterfaces"; version="1.84.0"; sha256="1m8clkb5rznzv2fwrl59csq8v0ibqwdm4fphq10b8pmyvj880qpn"; depends=[annotate Biobase BiocGenerics cluster fpc gbm gdata genefilter ggvis hwriter magrittr MASS mlbench pls RColorBrewer Rcpp rpart sfsmisc shiny SummarizedExperiment threejs]; };
  MLP = derive2 { name="MLP"; version="1.52.0"; sha256="0ij15mcpahgykaalaj954qhk21gd967sngn2ad4wh4h6p99n6902"; depends=[AnnotationDbi gplots]; };
  MLSeq = derive2 { name="MLSeq"; version="2.22.0"; sha256="0vm4giqqp2iq1w40nkn4bjc81ppdhqhbxq6w6ps3i2rdzwcq49ir"; depends=[Biobase caret DESeq2 edgeR foreach ggplot2 limma pamr plyr sSeq SummarizedExperiment testthat VennDiagram xtable]; };
  MMDiff2 = derive2 { name="MMDiff2"; version="1.32.0"; sha256="0yamcgjb5k77pkv1b0bja5f2i7aqw12wpyppf1mw9s8mqfx3cl0y"; depends=[Biobase Biostrings BSgenome GenomicRanges ggplot2 locfit RColorBrewer Rsamtools S4Vectors shiny]; };
  MMUPHin = derive2 { name="MMUPHin"; version="1.18.1"; sha256="0wh998bjbf8zkfrzmrnm8dmm7960w5dnaq1yyc1hl105al0j33aj"; depends=[cowplot dplyr fpc ggplot2 igraph Maaslin2 metafor stringr tidyr]; };
  MODA = derive2 { name="MODA"; version="1.30.0"; sha256="1cx3jz8hw1zm68cay84gkxq9wlfwfdm9ms70af6hck4fl2spxj66"; depends=[AMOUNTAIN cluster dynamicTreeCut igraph RColorBrewer WGCNA]; };
  MOFA2 = derive2 { name="MOFA2"; version="1.14.0"; sha256="0sf0vibw44ildxf5rdkqjhw85awl5iz9f62j9z660lf3f8h5v5qq"; depends=[basilisk corrplot cowplot DelayedArray dplyr forcats ggplot2 ggrepel HDF5Array magrittr pheatmap RColorBrewer reshape2 reticulate rhdf5 Rtsne stringi tidyr uwot]; };
  MOGAMUN = derive2 { name="MOGAMUN"; version="1.14.0"; sha256="0l6pbn89a3pp157fbcwpkihmx869afi0qvm16yjac0mrhwspgbk8"; depends=[BiocParallel igraph RCy3 RUnit stringr]; };
  MOMA = derive2 { name="MOMA"; version="1.16.0"; sha256="1xbacfm9cikdhhb64l068hi4hcpqvh0g573cm8c3jxicxbgp3swv"; depends=[circlize cluster ComplexHeatmap dplyr ggplot2 magrittr MKmisc MultiAssayExperiment qvalue RColorBrewer readr reshape2 rlang stringr tibble tidyr]; };
  MOSim = derive2 { name="MOSim"; version="2.0.0"; sha256="0mj53b4m4f2bzspgypiymhk780dcmbrfdrdki46bqjnb124y0c2q"; depends=[cpp11 dplyr edgeR ggplot2 HiddenMarkov IRanges lazyeval matrixStats Rcpp rlang S4Vectors scran Seurat Signac stringi stringr zoo]; };
  MPFE = derive2 { name="MPFE"; version="1.40.0"; sha256="15sj1r9wa0irkym5z527r7s3krk4y5shgffv9w3fcdj90gqclc23"; depends=[]; };
  MPRAnalyze = derive2 { name="MPRAnalyze"; version="1.22.0"; sha256="1gswhf7k4y0g28wv3hjwcrg9ms1g4ky0rxdlzli1in8d4cly7154"; depends=[BiocParallel progress SummarizedExperiment]; };
  MSA2dist = derive2 { name="MSA2dist"; version="1.8.0"; sha256="0bb37mdw671cc7751wfdsslcaz04i3sbjdp3y11n7yl5pmkx1k6b"; depends=[ape Biostrings doParallel dplyr foreach GenomicRanges IRanges pwalign Rcpp RcppThread rlang seqinr stringi stringr tibble tidyr]; };
  MSPrep = derive2 { name="MSPrep"; version="1.14.0"; sha256="0856s9a268sv2ablqb6s5gc98dl5z171xik1nk7jpx5vdx9iwj5b"; depends=[crmn dplyr magrittr missForest pcaMethods preprocessCore rlang S4Vectors stringr SummarizedExperiment sva tibble tidyr VIM]; };
  MSnID = derive2 { name="MSnID"; version="1.38.0"; sha256="0misrm4x4z5h8dfwcrwi24nhcjslqvbyk5n7qz6kf2zcgcwq8q44"; depends=[AnnotationDbi AnnotationHub Biobase BiocGenerics BiocStyle Biostrings data_table doParallel dplyr foreach ggplot2 iterators msmsTests MSnbase mzID mzR ProtGenerics purrr R_cache Rcpp reshape2 rlang RUnit stringr tibble xtable]; };
  MSnbase = derive2 { name="MSnbase"; version="2.30.1"; sha256="0cdvi2mjvhj0h8x2rh3kkzrdnmzhr7d9a41m21r6b843a0q7hp6f"; depends=[affy Biobase BiocGenerics BiocParallel digest ggplot2 impute IRanges lattice MALDIquant MASS MsCoreUtils mzID mzR pcaMethods plyr ProtGenerics PSMatch Rcpp S4Vectors scales vsn]; };
  MSstats = derive2 { name="MSstats"; version="4.12.0"; sha256="0nrh0hjbsxmf390k5bnniichkwlw3scq8y90bw7hqv21k7wzwfvp"; depends=[checkmate data_table ggplot2 ggrepel gplots htmltools limma lme4 marray MASS MSstatsConvert plotly preprocessCore Rcpp RcppArmadillo statmod survival]; };
  MSstatsBig = derive2 { name="MSstatsBig"; version="1.2.0"; sha256="1az35hsgij1cgpp6pl198dmlw26ddc1npdzaa5g8mwmdijwl3jz1"; depends=[arrow DBI dplyr MSstats MSstatsConvert readr sparklyr]; };
  MSstatsConvert = derive2 { name="MSstatsConvert"; version="1.14.0"; sha256="1q2xwik74qdazqmbh5qqcy21s9nq77jjvrc9qhkh1f0iss0r6pzm"; depends=[checkmate data_table log4r stringi]; };
  MSstatsLOBD = derive2 { name="MSstatsLOBD"; version="1.12.0"; sha256="0jav2x8j07v4zmbwk89l85rycn7k9y0ifb07gzg64v0pkls4341s"; depends=[ggplot2 minpack_lm Rcpp]; };
  MSstatsLiP = derive2 { name="MSstatsLiP"; version="1.10.0"; sha256="1kpfybpzav4bvy3jb2p3ws899mifjr564jqsdy9s4vbk5pphm9j0"; depends=[Biostrings checkmate data_table dplyr factoextra ggplot2 ggpubr gridExtra MSstats MSstatsConvert MSstatsPTM purrr Rcpp scales stringr tibble tidyr tidyverse]; };
  MSstatsPTM = derive2 { name="MSstatsPTM"; version="2.6.0"; sha256="0ivcxd2awrswih6n7is7zkcfrqiihk998g081krcp25i832xfqvh"; depends=[Biostrings checkmate data_table dplyr ggplot2 ggrepel gridExtra MSstats MSstatsConvert MSstatsTMT Rcpp stringi stringr]; };
  MSstatsQC = derive2 { name="MSstatsQC"; version="2.22.0"; sha256="0pp813mx6kwmxyyi67qsak09k012nn05pv60ndx8x6dq9ph8aghn"; depends=[dplyr ggExtra ggplot2 MSnbase plotly qcmetrics]; };
  MSstatsQCgui = derive2 { name="MSstatsQCgui"; version="1.24.0"; sha256="0kjidspplam63367yc09a17a3gq52rbmfrcnaxnxpiwkl7mphzz0"; depends=[dplyr ggExtra gridExtra MSstatsQC plotly shiny]; };
  MSstatsShiny = derive2 { name="MSstatsShiny"; version="1.6.2"; sha256="0h79yy5b9n2kfpbc3fhfajfmrqdzghj3ycaparn1v1dzjmi87z9y"; depends=[data_table dplyr DT ggplot2 ggrepel gplots Hmisc htmltools marray mockery MSstats MSstatsConvert MSstatsPTM MSstatsTMT plotly readxl shiny shinyBS shinybusy shinyjs tidyr uuid]; };
  MSstatsTMT = derive2 { name="MSstatsTMT"; version="2.12.1"; sha256="03nnwh5qbr3wd942yj5xa2gd2bk28ncxq2dri3my5gwsrlfxfxpn"; depends=[checkmate data_table ggplot2 htmltools limma lme4 lmerTest MSstats MSstatsConvert plotly]; };
  MVCClass = derive2 { name="MVCClass"; version="1.78.0"; sha256="1wi6acw51q48v149l72b2pp0iyjrwq1bbmr53y3m609xfadg4qim"; depends=[]; };
  MWASTools = derive2 { name="MWASTools"; version="1.28.0"; sha256="1k72ycx0zlflcfpqapvh9m6mk3vc9wl0pbsi4jbcdigl6vx1zixv"; depends=[boot car ComplexHeatmap ggplot2 glm2 gridExtra igraph KEGGgraph KEGGREST ppcor qvalue RCurl SummarizedExperiment]; };
  Maaslin2 = derive2 { name="Maaslin2"; version="1.18.0"; sha256="0dl6s4lcd40nd7v0d3k3zn0mkm5rlzb8kf2cjxz298mgdif63xqh"; depends=[biglm car chemometrics cplm data_table dplyr edgeR ggplot2 glmmTMB hash lme4 lmerTest logging MASS metagenomeSeq optparse pbapply pcaPP pheatmap pscl robustbase tibble vegan]; };
  Macarron = derive2 { name="Macarron"; version="1.8.0"; sha256="18k6fxr4iihrxkraf2p01wmmkaahq95yb08bh4f8dw7ji3my50n7"; depends=[BiocParallel data_table DelayedArray dynamicTreeCut ff httr logging Maaslin2 plyr psych RJSONIO SummarizedExperiment WGCNA xml2]; };
  MantelCorr = derive2 { name="MantelCorr"; version="1.74.0"; sha256="0h1abssaf0c00lsqqm3l4bg0rdsjh3i8famn6hlrigaha62cry7k"; depends=[]; };
  MassArray = derive2 { name="MassArray"; version="1.56.0"; sha256="0xhq3gqx8h7ijfvji66zwrv6fl87mhdwc228nr3x82zh351gd229"; depends=[]; };
  MassSpecWavelet = derive2 { name="MassSpecWavelet"; version="1.70.0"; sha256="0ckvnah0ck5z6calgrwk0k3y1nxpcyn41y84kz5bypzr77x6ssj2"; depends=[]; };
  MatrixGenerics = derive2 { name="MatrixGenerics"; version="1.16.0"; sha256="1r7n5p89460h47mnfh190184dbcmrbj0j5d7dswkfwh6ixan3zyc"; depends=[matrixStats]; };
  MatrixQCvis = derive2 { name="MatrixQCvis"; version="1.12.0"; sha256="0hghmns8i1yhycr18yxp7b7knbdnf1f705z1pic1ql5llzsi8jzj"; depends=[ComplexHeatmap dplyr ExperimentHub ggplot2 Hmisc htmlwidgets impute imputeLCMD limma MASS pcaMethods plotly proDA rlang rmarkdown Rtsne shiny shinydashboard shinyhelper shinyjs SummarizedExperiment tibble tidyr umap UpSetR vsn]; };
  MatrixRider = derive2 { name="MatrixRider"; version="1.36.0"; sha256="1v1y4z79kb5a9g8sr1mwzc5i9nf7prk07dnyn88048ddd5il2xgw"; depends=[Biostrings IRanges S4Vectors TFBSTools XVector]; };
  MeSHDbi = derive2 { name="MeSHDbi"; version="1.40.0"; sha256="0d56i63gcl523715idlm6irspkz3p4xdca0brfys1f56pr55skmw"; depends=[AnnotationDbi Biobase RSQLite]; };
  MeasurementError_cor = derive2 { name="MeasurementError.cor"; version="1.76.0"; sha256="034n9dfk4a5k4z9g2f90a08rlgk7qgi4i6spp54azlw9gmx4amfs"; depends=[]; };
  Melissa = derive2 { name="Melissa"; version="1.20.0"; sha256="0aswg1balk65rsnxnsdn65x5l5g1dya7z2n8yqr7agzigdw62pdf"; depends=[assertthat BiocStyle BPRMeth cowplot data_table doParallel foreach GenomicRanges ggplot2 magrittr matrixcalc mclust MCMCpack mvtnorm ROCR truncnorm]; };
  Mergeomics = derive2 { name="Mergeomics"; version="1.32.0"; sha256="0n5mdnvqqixrrwn1ph89vah81l2afd7wsbsnh5mnhgmm50pjcg1b"; depends=[]; };
  MesKit = derive2 { name="MesKit"; version="1.14.0"; sha256="0r6a200zyp97vjdk78fch5xmvqbqjmhf9n7cc9y911ifll7md35a"; depends=[AnnotationDbi ape Biostrings circlize ComplexHeatmap cowplot data_table dplyr ggplot2 ggrepel ggridges IRanges mclust phangorn pracma RColorBrewer S4Vectors tidyr]; };
  MetCirc = derive2 { name="MetCirc"; version="1.34.0"; sha256="1wkmhlxg3gxfxskhhxrm65y6vriggs34523adrsghx1ra0wgyjvf"; depends=[amap circlize ggplot2 MsCoreUtils S4Vectors scales shiny Spectra]; };
  MetID = derive2 { name="MetID"; version="1.22.0"; sha256="0i6jpn1q0632klpa6817v9xs2kkdvsajhjv6h1p2f6jdx0smsd64"; depends=[ChemmineR devtools igraph Matrix stringr]; };
  MetNet = derive2 { name="MetNet"; version="1.22.0"; sha256="1dpp9z9h3dkbx9k0hxg5dr9178sbs095kyr2ka5sihxm2in0prrg"; depends=[BiocParallel bnlearn corpcor dplyr GeneNet GENIE3 ggplot2 parmigene psych rlang S4Vectors stabs SummarizedExperiment tibble tidyr]; };
  MetaCyto = derive2 { name="MetaCyto"; version="1.26.0"; sha256="15yd35ql64ca9ixv6rcq9v6gaaxis9nzx4q2jdij3facrb2ryyfk"; depends=[cluster fastcluster flowCore FlowSOM ggplot2 metafor tidyr]; };
  MetaNeighbor = derive2 { name="MetaNeighbor"; version="1.24.0"; sha256="0sz15njb0y9vcmbv89k3x2sw4px8nmy3qhqkvyl69kxlcqdicgxi"; depends=[beanplot dplyr ggplot2 gplots igraph Matrix matrixStats RColorBrewer SingleCellExperiment SummarizedExperiment tibble tidyr]; };
  MetaPhOR = derive2 { name="MetaPhOR"; version="1.6.0"; sha256="0r3zqb7rmw5fnwm6hkpy22gndpn4jd24471acqfsi3a894g0868p"; depends=[clusterProfiler ggplot2 ggrepel pheatmap RCy3 RecordLinkage stringr]; };
  MetaboAnnotation = derive2 { name="MetaboAnnotation"; version="1.8.1"; sha256="0lsrhyyqsdz27mc6vl0aj78bdj3xh5i3h3dsg9smkhg2m22h3sdf"; depends=[AnnotationHub BiocGenerics BiocParallel CompoundDb MetaboCoreUtils MsCoreUtils ProtGenerics QFeatures S4Vectors Spectra SummarizedExperiment]; };
  MetaboCoreUtils = derive2 { name="MetaboCoreUtils"; version="1.12.0"; sha256="1y5lq1x60pcvxsl8dim5plzd3y4bqjkcam5hv9614xw0sr4h0r04"; depends=[BiocParallel MsCoreUtils]; };
  MetaboSignal = derive2 { name="MetaboSignal"; version="1.34.0"; sha256="0ldi6qs0hfnwlpvwc0v0yn3j6gms4kgays8f5fap8vj8nw2gljbj"; depends=[AnnotationDbi biomaRt EnsDb_Hsapiens_v75 hpar igraph KEGGgraph KEGGREST MWASTools mygene org_Hs_eg_db RCurl]; };
  MethPed = derive2 { name="MethPed"; version="1.32.0"; sha256="13hwdxvmczzr77572pws58590lk09z6sda8144qxlljy4y5ii7zw"; depends=[Biobase randomForest]; };
  MethReg = derive2 { name="MethReg"; version="1.14.0"; sha256="1fzbrp09d57s2zvxl7jsc8dqwchz43xl0vnxkj2r0q0knlpsbbr2"; depends=[AnnotationHub DelayedArray dplyr ExperimentHub GenomicRanges ggplot2 ggpubr IRanges JASPAR2024 MASS Matrix openxlsx plyr progress pscl readr rlang RSQLite S4Vectors sesame sesameData sfsmisc stringr SummarizedExperiment TFBSTools tibble tidyr]; };
  MethTargetedNGS = derive2 { name="MethTargetedNGS"; version="1.36.0"; sha256="15bw9bxg99bfmwgfi45qgrp5dk15k44i0s6jp34kwnxkp18010ab"; depends=[Biostrings gplots pwalign seqinr stringr]; };
  MethylAid = derive2 { name="MethylAid"; version="1.38.0"; sha256="084mnllaj6qp5ai5bmj6wgc90bs270qbzl60sch1f863x8fv9lzr"; depends=[Biobase BiocGenerics BiocParallel ggplot2 gridBase hexbin matrixStats minfi RColorBrewer shiny SummarizedExperiment]; };
  MethylMix = derive2 { name="MethylMix"; version="2.34.0"; sha256="1mdhqqlbkh24bqz0bxvzih2cnl38nyacrfhsz8mq8ky2j5rsrbg0"; depends=[data_table digest foreach ggplot2 impute limma R_matlab RColorBrewer RCurl RPMM]; };
  MethylSeekR = derive2 { name="MethylSeekR"; version="1.44.0"; sha256="10b3m0d5z426p74x4hjg4imqg8iic0xjjnjcllwphy0ylk3cpzd5"; depends=[BSgenome geneplotter GenomicRanges IRanges mhsmm rtracklayer]; };
  Mfuzz = derive2 { name="Mfuzz"; version="2.64.0"; sha256="00sx63bg5qw22vw0yw3syhyl5ffjrqvf81b9ksgw2p0z3yiiss5h"; depends=[Biobase e1071 tkWidgets]; };
  MiChip = derive2 { name="MiChip"; version="1.58.0"; sha256="0mmb63h29l6xhwwxxlnz6a0p04wsxlskagih11rwmwnwm0blv68k"; depends=[Biobase]; };
  MiPP = derive2 { name="MiPP"; version="1.76.0"; sha256="12wk4kk7qbba3681ikldivs3np9qvvl0mivqds0dd6l52v1ngj9p"; depends=[Biobase e1071 MASS]; };
  MiRaGE = derive2 { name="MiRaGE"; version="1.46.0"; sha256="17c3rrq9h2mlhqjcjiyzg88d1giks9iq2vdlsvv6fg9cl4wqpvg1"; depends=[AnnotationDbi Biobase BiocGenerics BiocManager S4Vectors]; };
  MicrobiomeProfiler = derive2 { name="MicrobiomeProfiler"; version="1.10.0"; sha256="1xz2s2alz61s5hp5fq42m5n3bby89lyp5mr7pgav8xkyiglk471f"; depends=[clusterProfiler config DT enrichplot ggplot2 golem gson htmltools magrittr shiny shinycustomloader shinyWidgets]; };
  MicrobiotaProcess = derive2 { name="MicrobiotaProcess"; version="1.16.0"; sha256="0jqvxr77c9karq8wm53khs47vwrrvy86q6sl0dpsbydfmjw0blln"; depends=[ape Biostrings cli coin data_table dplyr dtplyr foreach ggfun ggplot2 ggrepel ggsignif ggstar ggtree ggtreeExtra magrittr MASS patchwork pillar plyr rlang SummarizedExperiment tibble tidyr tidyselect tidytree treeio vegan zoo]; };
  MineICA = derive2 { name="MineICA"; version="1.44.0"; sha256="1qzqfnrf23lrlxmds8hjblj169sylq1m9h07vwlz5zik5mxj6y90"; depends=[annotate AnnotationDbi Biobase BiocGenerics biomaRt cluster colorspace fastICA foreach fpc ggplot2 GOstats graph gtools Hmisc igraph JADE lumi lumiHumanAll_db marray mclust plyr RColorBrewer Rgraphviz scales xtable]; };
  MinimumDistance = derive2 { name="MinimumDistance"; version="1.48.0"; sha256="1pqf2q5hxjb1dwg981aldl0sw10f86yszp6z511vzx1y70ca6j3h"; depends=[Biobase BiocGenerics data_table DNAcopy ff foreach GenomeInfoDb GenomicRanges IRanges lattice MatrixGenerics matrixStats oligoClasses S4Vectors SummarizedExperiment VanillaICE]; };
  ModCon = derive2 { name="ModCon"; version="1.12.0"; sha256="06v2ka7rhiqnjdgb7ky6ps2b90j29y1yqsvkk24a6nsd2q8gpkil"; depends=[data_table]; };
  Modstrings = derive2 { name="Modstrings"; version="1.20.0"; sha256="0yc8gsgxlww2g9z1m6jl02aqmama10fkr2mvibvdi01s5pqwdbky"; depends=[BiocGenerics Biostrings crayon GenomicRanges IRanges S4Vectors stringi stringr XVector]; };
  MoleculeExperiment = derive2 { name="MoleculeExperiment"; version="1.4.1"; sha256="0w539058lm99z53lkjf9ljk1dr4fp150a9cwa9s9xrax90wpmy6j"; depends=[BiocParallel cli data_table dplyr EBImage ggplot2 magrittr Matrix purrr rhdf5 rjson rlang S4Vectors SpatialExperiment terra]; };
  Moonlight2R = derive2 { name="Moonlight2R"; version="1.2.0"; sha256="0ff37hjp3llf875z4wym60vanda6gbysqmcp90dcbl33bx0fynja"; depends=[AnnotationHub Biobase BiocGenerics circlize clusterProfiler ComplexHeatmap doParallel DOSE dplyr easyPubMed EpiMix ExperimentHub foreach fuzzyjoin GenomicRanges GEOquery ggplot2 gplots HiveR magrittr org_Hs_eg_db parmigene purrr qpdf randomForest RColorBrewer readr RISmed rtracklayer seqminer stringr tibble tidyHeatmap tidyr]; };
  MoonlightR = derive2 { name="MoonlightR"; version="1.30.0"; sha256="0jhc7y01qrz3cg2jnjqwgi5cgrh6616q9k3f3hldkq0x6z0z1vwn"; depends=[Biobase circlize clusterProfiler doParallel DOSE foreach GEOquery gplots HiveR limma parmigene randomForest RColorBrewer RISmed SummarizedExperiment TCGAbiolinks]; };
  Motif2Site = derive2 { name="Motif2Site"; version="1.8.0"; sha256="03rjhrxi016q0k7dzbfwr192sgc6z5kjyqdd6qzdajkpgq6dpi2m"; depends=[BiocGenerics Biostrings BSgenome edgeR GenomeInfoDb GenomicAlignments GenomicRanges IRanges MASS mixtools S4Vectors]; };
  MotifDb = derive2 { name="MotifDb"; version="1.46.0"; sha256="1m8y76gg80625xz9g9101mfq19glk37p792yzz46807f7g6m8zbh"; depends=[BiocGenerics Biostrings GenomicRanges IRanges rtracklayer S4Vectors splitstackshape]; };
  MouseFM = derive2 { name="MouseFM"; version="1.14.0"; sha256="0vwccf4fj664vbl0ggps51rac42j7xs5m33szhwdqpik6p2hyz7j"; depends=[biomaRt curl data_table dplyr GenomeInfoDb GenomicRanges ggplot2 gtools httr IRanges jsonlite reshape2 rlist scales tidyr]; };
  MsBackendMassbank = derive2 { name="MsBackendMassbank"; version="1.12.0"; sha256="0sj378b6jphfamr3850k8f5f22mr50i9r1d94jz2js7y1az10rim"; depends=[BiocParallel DBI IRanges MsCoreUtils ProtGenerics S4Vectors Spectra]; };
  MsBackendMgf = derive2 { name="MsBackendMgf"; version="1.12.0"; sha256="1rphxis1jxd6295sab0lyx96h3rflwmrz5x1iqzn6pfyzgcr67rz"; depends=[BiocParallel IRanges MsCoreUtils ProtGenerics S4Vectors Spectra]; };
  MsBackendMsp = derive2 { name="MsBackendMsp"; version="1.8.0"; sha256="1y80r12xsiw678mkjq5x9j9yp4l36w1hv9qxlac6bbhsp4kpbwi4"; depends=[BiocParallel IRanges MsCoreUtils ProtGenerics S4Vectors Spectra]; };
  MsBackendRawFileReader = derive2 { name="MsBackendRawFileReader"; version="1.10.0"; sha256="17xnbhnvz28ksfw51aba9p9wl5q0y7wl88yxsdhjwc58f3h8a1rn"; depends=[BiocParallel IRanges MsCoreUtils ProtGenerics rawrr S4Vectors Spectra]; };
  MsBackendSql = derive2 { name="MsBackendSql"; version="1.4.0"; sha256="1ng4ns03a8lbb63rczcl1j9c780vqnhc3plj5v3602xmnrxpadrl"; depends=[BiocGenerics BiocParallel data_table DBI IRanges MsCoreUtils progress ProtGenerics S4Vectors Spectra]; };
  MsCoreUtils = derive2 { name="MsCoreUtils"; version="1.16.0"; sha256="18m6qbj43p6zsrsdp7in15z3hcnqzqcxbk24qvbq7328rrhdk84a"; depends=[clue MASS Rcpp S4Vectors]; };
  MsDataHub = derive2 { name="MsDataHub"; version="1.4.0"; sha256="1kxcf7pz8vfidzjqb0czc9znml5nj4bqrbiwrx2j13igrf5v6jnh"; depends=[ExperimentHub]; };
  MsExperiment = derive2 { name="MsExperiment"; version="1.6.0"; sha256="0dxv3jw5aj1i73vqrp3c031pj26i7rp0q2zs4nq3x1vni349506d"; depends=[BiocGenerics DBI IRanges ProtGenerics QFeatures S4Vectors Spectra SummarizedExperiment]; };
  MsFeatures = derive2 { name="MsFeatures"; version="1.12.0"; sha256="1prn45vlacj69388psimy0w05a84y8sdry6678pz611sd0ks1gka"; depends=[MsCoreUtils ProtGenerics SummarizedExperiment]; };
  MsQuality = derive2 { name="MsQuality"; version="1.4.0"; sha256="1khpjzzrrd2b7ngwq43y3sgndmrr6l8f504lyakr46xr1vyzppsl"; depends=[BiocParallel ggplot2 htmlwidgets msdata MsExperiment plotly ProtGenerics rlang rmzqc shiny shinydashboard Spectra stringr tibble tidyr]; };
  MuData = derive2 { name="MuData"; version="1.8.0"; sha256="0kjin6cfw9aipghd0imi2play19czplwcz2gi5akv6gk9wy98k8x"; depends=[DelayedArray Matrix MultiAssayExperiment rhdf5 S4Vectors SingleCellExperiment SummarizedExperiment]; };
  Mulcom = derive2 { name="Mulcom"; version="1.54.0"; sha256="1sb6g08k1wlnjiiw9a7hm34izbnh8ar1mh6vxc0jzkwk6522nva2"; depends=[Biobase fields]; };
  MultiAssayExperiment = derive2 { name="MultiAssayExperiment"; version="1.30.2"; sha256="1j74ql0lz2xf0jsf4cjfapdmxbf6hb22699d3dyj8gwd1s92myjz"; depends=[Biobase BiocBaseUtils BiocGenerics DelayedArray GenomicRanges IRanges S4Vectors SummarizedExperiment tidyr]; };
  MultiBaC = derive2 { name="MultiBaC"; version="1.14.0"; sha256="0m08620sii9181y0vlcrw9nbcnp4vnjjxvp96iqlgg5fsb23wbl7"; depends=[ggplot2 Matrix MultiAssayExperiment pcaMethods plotrix ropls]; };
  MultiDataSet = derive2 { name="MultiDataSet"; version="1.32.0"; sha256="1y1j5svi52cvixjsn13122kvd0z0c7zfki3p6rr8wjd5w7riiyqw"; depends=[Biobase BiocGenerics GenomicRanges ggplot2 ggrepel IRanges limma qqman S4Vectors SummarizedExperiment]; };
  MultiMed = derive2 { name="MultiMed"; version="2.26.0"; sha256="03qcqzkh5jiy46613g29bs7dipgzzparwdcllw1lwssh4y8fvwc0"; depends=[]; };
  MultiRNAflow = derive2 { name="MultiRNAflow"; version="1.2.0"; sha256="0i7zs0gd8p927zcdsx85wdk3wi4ywg4s4y3ichqqidqs01hdxccd"; depends=[Biobase ComplexHeatmap DESeq2 factoextra FactoMineR ggalluvial ggplot2 ggplotify ggrepel gprofiler2 Mfuzz plot3D plot3Drgl reshape2 S4Vectors SummarizedExperiment UpSetR]; };
  MultimodalExperiment = derive2 { name="MultimodalExperiment"; version="1.4.0"; sha256="0zik59sh26ycbsagcvwzhb9g4aqvkbygigpzy8d9i0gss0rvvljp"; depends=[BiocGenerics IRanges MultiAssayExperiment S4Vectors]; };
  MungeSumstats = derive2 { name="MungeSumstats"; version="1.12.0"; sha256="16msjxxmnzycj2nny35lvwvlxw1n4ga8g1wn4fcfv7xg4ad6vy4v"; depends=[Biostrings BSgenome data_table dplyr GenomeInfoDb GenomicRanges googleAuthR httr IRanges jsonlite magrittr R_utils RCurl rtracklayer stringr VariantAnnotation]; };
  MutationalPatterns = derive2 { name="MutationalPatterns"; version="3.14.0"; sha256="0smf4l023ckwsm5ckrqqw7kjyi1awp378mzhab7v8nk9n5smsj61"; depends=[BiocGenerics Biostrings BSgenome cowplot dplyr GenomeInfoDb GenomicRanges ggalluvial ggdendro ggplot2 IRanges magrittr NMF pracma purrr RColorBrewer S4Vectors stringr tibble tidyr VariantAnnotation]; };
  NADfinder = derive2 { name="NADfinder"; version="1.28.0"; sha256="18bq7jf7f89263s4f4ib3qzlpwxsp181zjjm0cblkhjs7lw8p2zh"; depends=[ATACseqQC baseline BiocGenerics corrplot csaw EmpiricalBrownsMethod GenomeInfoDb GenomicAlignments GenomicRanges IRanges limma metap Rsamtools rtracklayer S4Vectors signal SummarizedExperiment trackViewer]; };
  NBAMSeq = derive2 { name="NBAMSeq"; version="1.20.0"; sha256="1iglbxv7wcgn7lwah8jd1q7gsrqjr3874nivl1msla35hkqw4v9a"; depends=[BiocParallel DESeq2 genefilter mgcv S4Vectors SummarizedExperiment]; };
  NCIgraph = derive2 { name="NCIgraph"; version="1.52.0"; sha256="16kkg568hdjsn4jq9hd9gl1n31wavshn79bpwhg5jxci288zgai0"; depends=[graph KEGGgraph R_oo RBGL RCy3]; };
  NOISeq = derive2 { name="NOISeq"; version="2.48.0"; sha256="1aph4phg58f4kpgavrxnn6dzh3lgms8sbjvip4f3gn8xs0p01mbz"; depends=[Biobase Matrix]; };
  NPARC = derive2 { name="NPARC"; version="1.16.0"; sha256="0giq5nxqnsqppz12adln7kvdb8lifch57wg6avdl88xrdzpl3vfw"; depends=[BiocParallel broom dplyr magrittr MASS rlang tidyr]; };
  NTW = derive2 { name="NTW"; version="1.54.0"; sha256="1knkqrs3rlhl9qvp6670hc7qhgyi6pmcs47xcivpn2jk6ss00xhk"; depends=[mvtnorm]; };
  NanoMethViz = derive2 { name="NanoMethViz"; version="3.0.2"; sha256="0nlbkikmxdq08m24sch8cy10m63v33536p5rx1zy5c4f4pa86yrw"; depends=[AnnotationDbi assertthat BiocSingular Biostrings bsseq cli cpp11 data_table dbscan dplyr e1071 forcats fs GenomicRanges ggplot2 ggrastr glue IRanges limma patchwork purrr R_utils Rcpp readr rlang Rsamtools S4Vectors scales scico stringr SummarizedExperiment tibble tidyr withr zlibbioc]; };
  NanoStringDiff = derive2 { name="NanoStringDiff"; version="1.34.0"; sha256="0rasmzc12xl6mh9l2989wgp9q30665iqqgxr1fy6r57j7hixwbc1"; depends=[Biobase matrixStats Rcpp]; };
  NanoStringNCTools = derive2 { name="NanoStringNCTools"; version="1.12.0"; sha256="1n1zc99v5xzd89q512v24wa7gmbgdp8g9aixvh6cjismah0vpgjr"; depends=[Biobase BiocGenerics Biostrings ggbeeswarm ggiraph ggplot2 ggthemes IRanges pheatmap RColorBrewer S4Vectors]; };
  NanoTube = derive2 { name="NanoTube"; version="1.10.0"; sha256="1i5fs2lkqmyl0hb1s6f56z3wmwhmvw2mkygl3ibn0qwfh460l4f1"; depends=[Biobase fgsea ggplot2 limma reshape]; };
  Nebulosa = derive2 { name="Nebulosa"; version="1.14.0"; sha256="0m5z6rribsrk9mzcksjh0nmpf4d0x0hn8jd80h0hj0hj8sj1ifgv"; depends=[ggplot2 ggrastr ks Matrix patchwork SeuratObject SingleCellExperiment SummarizedExperiment]; };
  NetActivity = derive2 { name="NetActivity"; version="1.6.0"; sha256="0hssxa9i5c090929mnjs7nqn56fmg7qhq0iknfrl9d0wvpibm3bh"; depends=[airway DelayedArray DelayedMatrixStats DESeq2 NetActivityData SummarizedExperiment]; };
  NetPathMiner = derive2 { name="NetPathMiner"; version="1.40.0"; sha256="1fv4ijiksp2ff5sxjgp1bfzxfcqr853nrsdgfn0i8zqz9ba20a6p"; depends=[igraph]; };
  NetSAM = derive2 { name="NetSAM"; version="1.44.0"; sha256="07l5cgl72mkh3j96lciwalsb0ps0bs7rfxzm78m5279palawf6vb"; depends=[AnnotationDbi biomaRt DBI doParallel foreach GO_db igraph R2HTML seriation survival WGCNA]; };
  NeuCA = derive2 { name="NeuCA"; version="1.10.0"; sha256="0k5bqdrja3x238fyrd7dm5jm94igh25b0ipb2zj6scpa4m15n67l"; depends=[e1071 kableExtra keras limma SingleCellExperiment]; };
  NewWave = derive2 { name="NewWave"; version="1.14.0"; sha256="03m6dd0p2d542k36jwvz9ik8cddw1q3dz9ghqy0w1dbf685r0kf0"; depends=[BiocSingular DelayedArray irlba Matrix SharedObject SingleCellExperiment SummarizedExperiment]; };
  NoRCE = derive2 { name="NoRCE"; version="1.16.0"; sha256="0di23zmjfba4nmbbkcn2xhqamxxn4hfkhyh3skc46b66rl1yjy3n"; depends=[AnnotationDbi biomaRt DBI dbplyr dplyr GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 GO_db igraph IRanges KEGGREST png RCurl reactome_db readr reshape2 RSQLite rtracklayer rWikiPathways S4Vectors stringr SummarizedExperiment tidyr zlibbioc]; };
  NormalyzerDE = derive2 { name="NormalyzerDE"; version="1.22.0"; sha256="1kiwyf8fkdp7bml4b5f32schyl0s5c0b1ag4g826rakh487sb69b"; depends=[ape Biobase car ggforce ggplot2 limma MASS matrixStats preprocessCore SummarizedExperiment vsn]; };
  NormqPCR = derive2 { name="NormqPCR"; version="1.50.0"; sha256="1fl7qm6qmzxvv41qd1y8ds3r6dqk39rqgh6sl8imbggmnpb27j9h"; depends=[Biobase qpcR RColorBrewer ReadqPCR]; };
  NuPoP = derive2 { name="NuPoP"; version="2.12.0"; sha256="1w6q7ms57wixw5w3fx74qc6l8mgcklysqq1s6jg69mipwgch62hm"; depends=[]; };
  OCplus = derive2 { name="OCplus"; version="1.78.0"; sha256="0bqa1rml6vj6sw27pxlhjjsfx2cyi2lv6v4hykdcc8kgh8a1r8dm"; depends=[interp multtest]; };
  OGRE = derive2 { name="OGRE"; version="1.8.0"; sha256="07xkprp1hjhavj9d360yhybpq9ghz0wxwaxlicpidm788nvksxqv"; depends=[AnnotationHub assertthat data_table DT GenomeInfoDb GenomicRanges ggplot2 Gviz IRanges rtracklayer S4Vectors shiny shinyBS shinydashboard shinyFiles tidyr]; };
  OLIN = derive2 { name="OLIN"; version="1.82.0"; sha256="05s28by46adrizrglfsr9m26jiygkyp0dabdr62nasjmqzidwf80"; depends=[limma locfit marray]; };
  OLINgui = derive2 { name="OLINgui"; version="1.78.0"; sha256="0fcpy0g95l0h2id13dra46zyphyjdh2m7gw9i38i5jnr4arhy95z"; depends=[marray OLIN tkWidgets widgetTools]; };
  OMICsPCA = derive2 { name="OMICsPCA"; version="1.22.0"; sha256="0m5b6msnkvvv0lpj8zm976yqa5pd2vzkhpgzx58f95dbcaxpxflq"; depends=[cluster clValid corrplot cowplot data_table factoextra FactoMineR fpc GenomeInfoDb ggplot2 HelloRanges IRanges kableExtra magick MASS MultiAssayExperiment NbClust OMICsPCAdata pdftools PerformanceAnalytics reshape2 rgl rmarkdown rtracklayer tidyr]; };
  OPWeight = derive2 { name="OPWeight"; version="1.26.0"; sha256="11lrks7wrvzi3i0f1hnky386x60j5vnz8i73dng1fzb64n41mla8"; depends=[MASS qvalue tibble]; };
  ORFhunteR = derive2 { name="ORFhunteR"; version="1.12.0"; sha256="0ahs8j1qlfxblkbvxfd9836l72icr8lqaywpih9s4slx6j38l53p"; depends=[Biostrings BSgenome_Hsapiens_UCSC_hg38 data_table Peptides randomForest Rcpp rtracklayer stringr xfun]; };
  ORFik = derive2 { name="ORFik"; version="1.24.0"; sha256="0cm1rb4l0kciw8h1555qbixh9krwdnbgbvrb4dq753yjc3wdizfx"; depends=[AnnotationDbi BiocFileCache BiocGenerics BiocParallel biomaRt biomartr Biostrings BSgenome cowplot curl data_table DESeq2 downloader fst GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 gridExtra httr IRanges jsonlite R_utils Rcpp RCurl Rsamtools rtracklayer S4Vectors SummarizedExperiment txdbmaker withr XML xml2]; };
  OSAT = derive2 { name="OSAT"; version="1.52.0"; sha256="0bap6n61wzrkbl1cvlfwrnzgvdgkfzfa37fb5r22ynyv847jhl7n"; depends=[]; };
  OTUbase = derive2 { name="OTUbase"; version="1.54.0"; sha256="02hbz9xhhmggbvkgc41s91fwd9xr7li0215mn1axbfcr7dxppziq"; depends=[Biobase Biostrings IRanges S4Vectors ShortRead vegan]; };
  OUTRIDER = derive2 { name="OUTRIDER"; version="1.22.0"; sha256="1zdv48ms62sy6pv24xnx5jf0286dr68zglckl38na2gvqymn8zj4"; depends=[BBmisc BiocGenerics BiocParallel data_table DESeq2 generics GenomicFeatures GenomicRanges ggplot2 ggrepel heatmaply IRanges matrixStats pcaMethods pheatmap plotly plyr PRROC RColorBrewer Rcpp RcppArmadillo reshape2 S4Vectors scales SummarizedExperiment txdbmaker]; };
  OVESEG = derive2 { name="OVESEG"; version="1.20.0"; sha256="0bj2d8i5b9y3zrcpm7qapdywd1s3zgqiikz4by1l7832z7r2imyx"; depends=[BiocParallel fdrtool limma Rcpp SummarizedExperiment]; };
  OmaDB = derive2 { name="OmaDB"; version="2.20.0"; sha256="093hqayqa0gb3m6yckqa75i9ha9laxlkpjj4y64nzgja1ny2g17b"; depends=[ape Biostrings GenomicRanges httr IRanges jsonlite plyr topGO]; };
  OmicCircos = derive2 { name="OmicCircos"; version="1.42.0"; sha256="0iqq9ds69vlm7fhhd72cvnj4pg07g6c2rkhvbbl6r1w8z33b26hs"; depends=[GenomicRanges]; };
  Omixer = derive2 { name="Omixer"; version="1.14.0"; sha256="1y87kb08syq45amm8cxxp2sjfi24isl4f0cl8ik0qisbm9ycw09k"; depends=[dplyr forcats ggplot2 gridExtra magrittr readr stringr tibble tidyselect]; };
  OmnipathR = derive2 { name="OmnipathR"; version="3.11.10"; sha256="1izy0ycrvac0k67dxq8879rbdghkrczd3s2g5v607js7bmfxybjz"; depends=[checkmate crayon curl digest dplyr httr igraph jsonlite later logger lubridate magrittr progress purrr rappdirs readr readxl rlang rmarkdown rvest stringi stringr tibble tidyr tidyselect withr xml2 yaml]; };
  OncoScore = derive2 { name="OncoScore"; version="1.32.0"; sha256="1n7rlng6jqrxsas2zs94jfmgwgs6yaxavn14q112qinlmjxcdfxp"; depends=[biomaRt]; };
  OncoSimulR = derive2 { name="OncoSimulR"; version="4.6.0"; sha256="1j7d7ajlalhiwn12kpbagx8f0gnfsals4p5bkiik7a5ybwann33r"; depends=[car data_table dplyr ggplot2 ggrepel graph gtools igraph RColorBrewer Rcpp Rgraphviz smatr stringr]; };
  OpenStats = derive2 { name="OpenStats"; version="1.16.0"; sha256="1hxazy0rf0rvvr1ivw33fi72099x3blzzzwymckxhqskmsj52120"; depends=[AICcmodavg car Hmisc jsonlite knitr MASS nlme rlist summarytools]; };
  OrderedList = derive2 { name="OrderedList"; version="1.76.0"; sha256="0g604sdjwz3p5r95slp98a87sb3clinpwj76xbrdmahbjcz1gm6s"; depends=[Biobase twilight]; };
  Organism_dplyr = derive2 { name="Organism.dplyr"; version="1.32.0"; sha256="03z5pyqbaxwyrq5m858c8k69fwvclq98ksr84dc4m7r8lzz2hfxx"; depends=[AnnotationDbi AnnotationFilter BiocFileCache DBI dbplyr dplyr GenomeInfoDb GenomicFeatures GenomicRanges IRanges rlang RSQLite S4Vectors tibble]; };
  OrganismDbi = derive2 { name="OrganismDbi"; version="1.46.0"; sha256="1cfh632rpmklmyd5cibwiy0i2pk2kk2m39g8mq5sxfwd2am4r0jk"; depends=[AnnotationDbi Biobase BiocGenerics BiocManager DBI GenomicFeatures GenomicRanges graph IRanges RBGL S4Vectors txdbmaker]; };
  Oscope = derive2 { name="Oscope"; version="1.34.0"; sha256="16d2ngakdg73rdx0bf1pz3z1n8npjzl3b7dn94g9zbayw4vp3x5z"; depends=[BiocParallel cluster EBSeq testthat]; };
  OutSplice = derive2 { name="OutSplice"; version="1.4.0"; sha256="1kln52s2a0icvsna2ip08gsmggbbp8arj4mnpaj068ff6maa4hy6"; depends=[AnnotationDbi GenomicFeatures GenomicRanges IRanges org_Hs_eg_db S4Vectors TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Hsapiens_UCSC_hg38_knownGene]; };
  PAA = derive2 { name="PAA"; version="1.38.0"; sha256="1afkvcb4d5iqzmn1nk51kn9xmwpbps00ymarsj3bc7zlf9aani4c"; depends=[e1071 gplots gtools limma MASS mRMRe randomForest Rcpp ROCR sva]; };
  PADOG = derive2 { name="PADOG"; version="1.46.0"; sha256="0rm8zyvgipb22z47nxyalfpdww8c7360zbmx4n7g3lnd2v8csgks"; depends=[AnnotationDbi Biobase doRNG foreach GSA hgu133a_db hgu133plus2_db KEGGdzPathwaysGEO KEGGREST limma nlme]; };
  PAIRADISE = derive2 { name="PAIRADISE"; version="1.20.0"; sha256="1dj5rx6jhcr3k9szhvaqc1savfbpqbm9q4i6n18mj23wzvvqhrp4"; depends=[abind BiocParallel nloptr S4Vectors SummarizedExperiment]; };
  PANR = derive2 { name="PANR"; version="1.50.0"; sha256="14s6ldpxvzkxh356s5i40sx4x286g81qjyfsd2ax4y32kk7qdb7r"; depends=[igraph MASS pvclust RedeR]; };
  PAST = derive2 { name="PAST"; version="1.20.0"; sha256="01d7lw7x0wfszpi9lnq9alpba3d54z6lcai4fpdn4y53diamaygy"; depends=[doParallel dplyr foreach GenomicRanges ggplot2 iterators qvalue rlang rtracklayer S4Vectors]; };
  PCAN = derive2 { name="PCAN"; version="1.32.0"; sha256="1iawwvvm55fkipmkfwq64s5lbzxk2l229x3idzb1gvvjrkqk9lb7"; depends=[BiocParallel]; };
  PCAtools = derive2 { name="PCAtools"; version="2.16.0"; sha256="04a1fvwgqxzf7992lyh9qzz2z2fgmfwfjvpw5xr21pcrpas57l2r"; depends=[beachmat BH BiocParallel BiocSingular cowplot DelayedArray DelayedMatrixStats dqrng ggplot2 ggrepel lattice Matrix Rcpp reshape2]; };
  PDATK = derive2 { name="PDATK"; version="1.12.0"; sha256="079gdwh9m90r5b0p0szqv222sgdmjr6s3sz19l5xz0435r7h53nv"; depends=[BiocGenerics BiocParallel caret clusterRepro ConsensusClusterPlus CoreGx data_table dplyr genefu ggplot2 ggplotify igraph MatrixGenerics matrixStats MultiAssayExperiment piano plyr pROC RColorBrewer reportROC rlang S4Vectors scales SummarizedExperiment survcomp survival survminer switchBox verification]; };
  PECA = derive2 { name="PECA"; version="1.40.0"; sha256="0vx17yhls9ccmp0mns7w89dq49d3alqnzxvq3kvhjrdxnhgdn5d1"; depends=[affy aroma_affymetrix aroma_core genefilter limma preprocessCore ROTS]; };
  PICS = derive2 { name="PICS"; version="2.48.0"; sha256="16vf27fjrvmhfjndn3d706w6a3fd10nsmg6zmj1cch13c863xr13"; depends=[GenomicAlignments GenomicRanges IRanges Rsamtools]; };
  PING = derive2 { name="PING"; version="2.48.0"; sha256="1r09afnm6m9s9z7f0g6wsm677pc681j985psddzgqfmcdwbz75i3"; depends=[BiocGenerics BSgenome fda GenomicRanges Gviz IRanges PICS S4Vectors]; };
  PIPETS = derive2 { name="PIPETS"; version="1.0.0"; sha256="12cbjmdgbjif3kjm9km55nvnb0srw8nzcf3x3gw86v1wi718jzv7"; depends=[BiocGenerics dplyr GenomicRanges]; };
  PIUMA = derive2 { name="PIUMA"; version="1.0.0"; sha256="10b8d8525pz7bl8kg5ga0ca2ngns7g9ik2grhvx920mza7pail46"; depends=[cluster dbscan ggplot2 Hmisc igraph kernlab patchwork scales SummarizedExperiment tsne umap vegan]; };
  PLPE = derive2 { name="PLPE"; version="1.64.0"; sha256="06g8qrxmd29f8skzll3k5lz68j97466n1wpv7qd2ibpl4hi6zyg0"; depends=[Biobase LPE MASS]; };
  PLSDAbatch = derive2 { name="PLSDAbatch"; version="1.0.0"; sha256="15zaxr8qv5rp04r8430bl8llkdx4vhwkjn8bl8a8sv6q39vvqvys"; depends=[Biobase BiocStyle ggplot2 ggpubr gridExtra lmerTest mixOmics performance pheatmap Rdpack scales TreeSummarizedExperiment vegan]; };
  POMA = derive2 { name="POMA"; version="1.14.0"; sha256="1g9xsmg3zv5h7l2wxk4zm4fsihzah8phg33p2hhqbinzkzk6pbkw"; depends=[broom caret ComplexHeatmap dbscan DESeq2 dplyr FSA ggplot2 ggrepel glmnet impute janitor limma lme4 magrittr MASS mixOmics randomForest RankProd rlang SummarizedExperiment sva tibble tidyr uwot vegan]; };
  POWSC = derive2 { name="POWSC"; version="1.12.0"; sha256="01jh4lhipkj5iga3vp0m42klpi8160mbzsqb5b029h7sil8n3w94"; depends=[Biobase ggplot2 limma MAST pheatmap RColorBrewer SingleCellExperiment SummarizedExperiment]; };
  PPInfer = derive2 { name="PPInfer"; version="1.30.0"; sha256="1b5x9z2w9vpnkbmgh05lxpg1pkjhxnsxaz86ma018czicarxqcx3"; depends=[biomaRt fgsea ggplot2 httr igraph kernlab STRINGdb yeastExpData]; };
  PREDA = derive2 { name="PREDA"; version="1.50.0"; sha256="17xcaw5spcl41dgilpx6cq9df1zzzrk4x6xaxpa5pmmfn7gfk4zv"; depends=[annotate Biobase lokern multtest]; };
  PROMISE = derive2 { name="PROMISE"; version="1.56.0"; sha256="1r9pcilq5vdq958gwcp29q2mc7w55l3xpn76acnnrh3xkg9gm8rf"; depends=[Biobase GSEABase]; };
  PROPER = derive2 { name="PROPER"; version="1.36.0"; sha256="1haqz50cdd3inmjw4ifj171rx1097bxw8mkgvx07kc7vx9ypn11s"; depends=[edgeR]; };
  PROPS = derive2 { name="PROPS"; version="1.26.0"; sha256="10xzvw2m9i7h7y227xqkzc41d6ajpzqwciwn6dkg5mgagss42367"; depends=[Biobase bnlearn reshape2 sva]; };
  PROcess = derive2 { name="PROcess"; version="1.80.0"; sha256="0ra9rjc6525df0hn7c09fzi6qnmnwcrycng49yy151l72yy8kiki"; depends=[Icens]; };
  PSMatch = derive2 { name="PSMatch"; version="1.8.0"; sha256="13w145is3d95392qqdq6qh3mrlcixbj0jzz4r590xas1qjp5d03h"; depends=[BiocGenerics BiocParallel igraph Matrix MsCoreUtils ProtGenerics QFeatures S4Vectors]; };
  PWMEnrich = derive2 { name="PWMEnrich"; version="4.40.0"; sha256="0fzmsm880w1vwbjcakc5mkljx41rpk8m71g49kwmjgb1z36173m2"; depends=[BiocGenerics Biostrings evd gdata S4Vectors seqLogo]; };
  PanViz = derive2 { name="PanViz"; version="1.6.0"; sha256="1h4fxqxkaph5j3vkfhmmkhvmqa8czzdzxcg6f06v94hqf38i86i5"; depends=[colorspace data_table dplyr easycsv futile_logger igraph magrittr RColorBrewer rentrez rlang stringr tibble tidyr]; };
  PanomiR = derive2 { name="PanomiR"; version="1.8.0"; sha256="0hzhhrknspdw81dn48xqx532n27lj88k57ydsfxfm6rkix87pv96"; depends=[clusterProfiler dplyr forcats GSEABase igraph limma metap org_Hs_eg_db preprocessCore RColorBrewer rlang tibble withr]; };
  Path2PPI = derive2 { name="Path2PPI"; version="1.34.0"; sha256="0ys63k4637pr9qv037vmvv39qwxpi94rpaqffj64r0z32hi34445"; depends=[igraph]; };
  PathNet = derive2 { name="PathNet"; version="1.44.0"; sha256="1ad0x8amp5kh4hync86w3kikhqx2j97hsgpb2qy81dn83kbfbdwd"; depends=[]; };
  PathoStat = derive2 { name="PathoStat"; version="1.30.0"; sha256="1y3gzv4nq9jykdl07mabw51m60g267hb5sjjn3p9g7r6ysasj8c2"; depends=[ape BiocStyle ComplexHeatmap corpcor DESeq2 devtools dplyr DT edgeR ggplot2 glmnet gmodels knitr limma matrixStats phyloseq plotly plyr RColorBrewer rentrez reshape2 ROCR scales shiny shinyjs tidyr vegan webshot XML]; };
  PeacoQC = derive2 { name="PeacoQC"; version="1.14.0"; sha256="1r354h8lmp0r2nlvr9xj45dm8gbqrsfhl2p3wc9gvldsllq7z3ix"; depends=[circlize ComplexHeatmap flowCore flowWorkspace ggplot2 gridExtra plyr]; };
  Pedixplorer = derive2 { name="Pedixplorer"; version="1.0.0"; sha256="0nkvypb1gh0b43p864c9rnfbvsdc9jb2jr3c0jrg33crxjf6rmr0"; depends=[dplyr ggplot2 Matrix plyr quadprog S4Vectors stringr testthat tidyr]; };
  PepsNMR = derive2 { name="PepsNMR"; version="1.22.0"; sha256="0z3kw8j972zmrcyikag5js20zpgc3l5bgkn5q31dzi1q7ynpkwhv"; depends=[ggplot2 gridExtra Matrix matrixStats ptw reshape2]; };
  PhIPData = derive2 { name="PhIPData"; version="1.12.0"; sha256="1ar7fdsxngdyikcvi7j230jqfhdvji4cvfrxkn606wy764mrpyrm"; depends=[BiocFileCache BiocGenerics cli edgeR GenomicRanges IRanges S4Vectors SummarizedExperiment]; };
  PharmacoGx = derive2 { name="PharmacoGx"; version="3.8.0"; sha256="098zg2c8xiw6v8fc072cnwlls5q762yjykaf6cjhyrz00bqxmvh1"; depends=[Biobase BiocGenerics BiocParallel boot caTools checkmate coop CoreGx data_table downloader ggplot2 jsonlite magicaxis MultiAssayExperiment RColorBrewer Rcpp reshape2 S4Vectors SummarizedExperiment]; };
  PhenStat = derive2 { name="PhenStat"; version="2.40.0"; sha256="0dpnij94h808aab8pyvvk7lnfn00f1hkisaasv28blj14fml63s8"; depends=[car corrplot ggplot2 graph knitr lme4 logistf MASS msgps nlme nortest pingr reshape SmoothWin]; };
  PhenoGeneRanker = derive2 { name="PhenoGeneRanker"; version="1.12.0"; sha256="1l85ibg1nm4dvwjc7b1gqmq6z5yrg3phfr24i23fzlddbwyx75hh"; depends=[doParallel dplyr foreach igraph Matrix]; };
  PhosR = derive2 { name="PhosR"; version="1.14.0"; sha256="05lc2l65nl15250f39rw7pcsfxw74rcakb6gg5wcp515iv13li07"; depends=[BiocGenerics circlize dendextend dplyr e1071 GGally ggdendro ggplot2 ggpubr ggtext igraph limma network pcaMethods pheatmap preprocessCore RColorBrewer reshape2 rlang ruv S4Vectors stringi SummarizedExperiment tidyr]; };
  PhyloProfile = derive2 { name="PhyloProfile"; version="1.18.0"; sha256="04z6k0i28d48v1d7n7zgxkb9n1747k27h5b5zlj8id8w293ggcaa"; depends=[ape BiocStyle bioDist Biostrings colourpicker data_table DT energy ExperimentHub ggplot2 gridExtra OmaDB pbapply plyr RColorBrewer RCurl shiny shinyBS shinycssloaders shinyFiles shinyjs stringr xml2 yaml zoo]; };
  Pigengene = derive2 { name="Pigengene"; version="1.30.0"; sha256="08jgn7cx3gvxsih8jp9xh1irf7f0j0yfw4srbc6ynffc0197papc"; depends=[BiocStyle bnlearn C50 clusterProfiler DBI DOSE dplyr gdata ggplot2 GO_db graph impute MASS matrixStats openxlsx partykit pheatmap preprocessCore ReactomePA Rgraphviz WGCNA]; };
  PoDCall = derive2 { name="PoDCall"; version="1.12.0"; sha256="121clnkr598p7iy91s0dp76ammz853p2cds0zy15pjj8n21rc7lv"; depends=[diptest DT ggplot2 gridExtra LaplacesDemon mclust purrr readr rlist shiny shinyjs]; };
  PrInCE = derive2 { name="PrInCE"; version="1.20.0"; sha256="173vakwqjalh2spz1f7qq6ngw8hjkqpj4zf0rx6xsnycjn54jip0"; depends=[Biobase dplyr forecast Hmisc LiblineaR magrittr MSnbase naivebayes progress purrr ranger Rdpack robustbase speedglm tester tidyr]; };
  Prostar = derive2 { name="Prostar"; version="1.36.2"; sha256="140whr7klab1as5y8h9lbmlgn4f63kfdfhzjyxjp8pk3aq1xv53i"; depends=[Biobase colourpicker DAPAR DAPARdata data_table DT future ggplot2 gplots gtools highcharter htmlwidgets later markdown promises R_utils rclipboard RColorBrewer rhandsontable sass shiny shinyAce shinyBS shinycssloaders shinyjqui shinyjs shinythemes shinyTree shinyWidgets tibble vioplot webshot XML]; };
  ProtGenerics = derive2 { name="ProtGenerics"; version="1.36.0"; sha256="0h0i4dgsgvyhma5pfvycv6wyxv27vp0b2i8b6l8hj55z8cvmvfln"; depends=[]; };
  ProteoDisco = derive2 { name="ProteoDisco"; version="1.10.0"; sha256="10cdniinadihp4acdz22c0zjg3if3rqn9cy753f2x1nq539n3vql"; depends=[BiocGenerics BiocParallel Biostrings checkmate cleaver dplyr GenomeInfoDb GenomicFeatures GenomicRanges IRanges ParallelLogger plyr rlang S4Vectors tibble tidyr VariantAnnotation XVector]; };
  ProteoMM = derive2 { name="ProteoMM"; version="1.22.0"; sha256="173nqg0nqdgy7z9qklxk88lxmhj7qf8jjcidpllf9hap9y1lk910"; depends=[biomaRt gdata ggplot2 ggrepel gtools matrixStats]; };
  PureCN = derive2 { name="PureCN"; version="2.10.0"; sha256="1vywvl90nvqlzbamn6g6iparn3b09zkz95sw13rgp8qlqc192nbf"; depends=[Biobase BiocGenerics Biostrings data_table DNAcopy futile_logger GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 gridExtra IRanges Matrix mclust RColorBrewer rhdf5 Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation VGAM]; };
  Pviz = derive2 { name="Pviz"; version="1.38.0"; sha256="1hshfgnidshwfka8l0fs4x4znpmmdi42wnkrrl6rhchj9dymjcnr"; depends=[Biostrings biovizBase data_table GenomicRanges Gviz IRanges]; };
  QDNAseq = derive2 { name="QDNAseq"; version="1.40.0"; sha256="1myk6qgl45ya7qw6sx6xc98d8m5ffl2ghm3zvqmyh9r0sp6x184f"; depends=[Biobase CGHbase CGHcall DNAcopy future_apply GenomicRanges IRanges matrixStats R_utils Rsamtools]; };
  QFeatures = derive2 { name="QFeatures"; version="1.14.1"; sha256="1sgvabfad3zibrg449y7hw8l59yb2d8q01x7lp841m45b1g0q9d8"; depends=[AnnotationFilter Biobase BiocGenerics igraph IRanges lazyeval MsCoreUtils MultiAssayExperiment plotly ProtGenerics reshape2 S4Vectors SummarizedExperiment tidyr tidyselect]; };
  QSutils = derive2 { name="QSutils"; version="1.22.0"; sha256="10z7cmhaqn4cp2lw3xq1mhjcjbph2lsprdz8k9q3qkmxgzl3anik"; depends=[ape BiocGenerics Biostrings psych pwalign]; };
  QTLExperiment = derive2 { name="QTLExperiment"; version="1.2.0"; sha256="1kns5kgfazfyg3bf19hvkqngq4n6xzqww5aya2h8bakl53bzk2sc"; depends=[ashr BiocGenerics checkmate collapse dplyr rlang S4Vectors SummarizedExperiment tibble tidyr vroom]; };
  QUBIC = derive2 { name="QUBIC"; version="1.32.0"; sha256="1dqg7vdpmsjd5prswz7g223q0wzwih44k8fz2cy5a83cdc1c7xl2"; depends=[biclust Matrix Rcpp RcppArmadillo]; };
  Qtlizer = derive2 { name="Qtlizer"; version="1.18.0"; sha256="0m307wfjqg7rrgsxvphggy1vd3l9l58vknjqnc63j02qr0wsw43m"; depends=[curl GenomicRanges httr stringi]; };
  QuartPAC = derive2 { name="QuartPAC"; version="1.36.0"; sha256="0ha8gv7a6ia4z2z2r7404hngc1sy269hrpj9gdxwhj7hl15nqs30"; depends=[Biostrings data_table GraphPAC iPAC pwalign SpacePAC]; };
  QuasR = derive2 { name="QuasR"; version="1.44.0"; sha256="116qnp7d7z4a56fv6n55yzrdlmma9gwrw234nmy8iapkn5ms3xky"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicFeatures GenomicFiles GenomicRanges IRanges Rbowtie Rhtslib Rsamtools rtracklayer S4Vectors ShortRead txdbmaker]; };
  QuaternaryProd = derive2 { name="QuaternaryProd"; version="1.38.0"; sha256="0bpx4lliz75jh6d2ngrmjc21577aawrcs7lh1k5pwg94jmj03pmg"; depends=[dplyr Rcpp yaml]; };
  R3CPET = derive2 { name="R3CPET"; version="1.36.0"; sha256="12gq5mj6vbkd49slhpgnmwfdl65hr4wip9xbqx3j72b0f0yabg1h"; depends=[BiocGenerics clValid data_table GenomeInfoDb GenomicRanges ggbio ggplot2 Hmisc igraph IRanges pheatmap Rcpp RCurl reshape2 S4Vectors]; };
  R453Plus1Toolbox = derive2 { name="R453Plus1Toolbox"; version="1.54.0"; sha256="0x5p028x13hygd1b2l4g2dclm9lnwj1hsh6x58hmkpbx27w68rb9"; depends=[Biobase BiocGenerics biomaRt Biostrings BSgenome GenomicRanges IRanges pwalign R2HTML Rsamtools S4Vectors ShortRead SummarizedExperiment TeachingDemos VariantAnnotation xtable XVector]; };
  R4RNA = derive2 { name="R4RNA"; version="1.32.0"; sha256="0cpfngd11zlws756q8cnhy5451kj8hg5ckilvmhndfapkz4w93x1"; depends=[Biostrings]; };
  RAIDS = derive2 { name="RAIDS"; version="1.2.0"; sha256="0frwaqmbd74gccqj8ibkgkyj1ii7q8qczzmkv9wgi4m0d9m2cy0v"; depends=[AnnotationDbi AnnotationFilter BSgenome class ensembldb gdsfmt GENESIS GenomicRanges IRanges MatrixGenerics pROC rlang S4Vectors SNPRelate VariantAnnotation]; };
  RAREsim = derive2 { name="RAREsim"; version="1.8.0"; sha256="1d55wfs6rg3mq7x1f2aalgln6vpcb2qfp8fq3yi1ki4ki5dzpb05"; depends=[nloptr]; };
  RBGL = derive2 { name="RBGL"; version="1.80.0"; sha256="1n6rfrcvlgi6mzz36v9sniqr05xfjzvfdpv4xwsn1xq41326wdv3"; depends=[BH graph]; };
  RBM = derive2 { name="RBM"; version="1.36.0"; sha256="10q0b86jjpf5ch3xpax6vwkl8cd72djzvij0b6p53as7n8nqxz0p"; depends=[limma marray]; };
  RBioFormats = derive2 { name="RBioFormats"; version="1.4.0"; sha256="1xwazjipv1yrxyx9mny7j7mmc7mvdlrmvjwy8v3i2hfmf137nlj1"; depends=[EBImage rJava S4Vectors]; };
  RBioinf = derive2 { name="RBioinf"; version="1.64.0"; sha256="093gd1z1yqyhdqs8s7yyjb2ndf9izp0pnpbglp05599cf053zfnr"; depends=[graph]; };
  RCAS = derive2 { name="RCAS"; version="1.30.0"; sha256="0ll0sj2zyazw0nxbpybq9frmxvmcjkgk3hwp3flnysjxg056dhxg"; depends=[BiocGenerics Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 cowplot data_table DT genomation GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 gprofiler2 IRanges knitr pbapply pheatmap plotly plotrix proxy ranger rmarkdown RSQLite rtracklayer S4Vectors seqLogo txdbmaker]; };
  RCASPAR = derive2 { name="RCASPAR"; version="1.50.0"; sha256="1aw2sqq8hmll31aagd6nxndwszxj16plba0v85jk880ycxpnd0hr"; depends=[]; };
  RCM = derive2 { name="RCM"; version="1.20.0"; sha256="03f8gifzqhc5hdppk4lfybj7p3gkqb5jnpsxpf515dd7c5y210gy"; depends=[alabama DBI edgeR ggplot2 MASS nleqslv phyloseq RColorBrewer reshape2 tensor tseries VGAM]; };
  RCSL = derive2 { name="RCSL"; version="1.12.0"; sha256="1r103i9v8b5w74b3ad7fr25sgsd0xx5kjrxawbwks57dk9k8m272"; depends=[ggplot2 igraph MatrixGenerics NbClust pracma Rcpp RcppAnnoy Rtsne SingleCellExperiment umap]; };
  RCX = derive2 { name="RCX"; version="1.8.0"; sha256="0vkh57hcz71h8v8ad1rffjakf4ax1pyh5vvfwfmfnkh19ywfln4i"; depends=[igraph jsonlite plyr]; };
  RCy3 = derive2 { name="RCy3"; version="2.24.0"; sha256="03zmskcb8n87x6m5jlhsh2b0b2qjk91y16fdcj3kz5c1j7zfs18i"; depends=[base64enc base64url BiocGenerics fs glue gplots graph httr IRdisplay IRkernel RColorBrewer RCurl RJSONIO stringi uuid XML]; };
  RCyjs = derive2 { name="RCyjs"; version="2.26.1"; sha256="0apqkpcrl7snsaldzranz1sk6zl6vc0rgrdg5h0srkzwdqnx10sh"; depends=[base64enc BiocGenerics BrowserViz graph httpuv]; };
  RDRToolbox = derive2 { name="RDRToolbox"; version="1.54.0"; sha256="1lg7z6wy4903fyg1j7x5bjd9l550g05rhx0gc60ki9pwlm7q82hv"; depends=[MASS rgl]; };
  REBET = derive2 { name="REBET"; version="1.22.0"; sha256="09wb77d7j1f59mlnqdl9q4nl1qn75a9qq3sfa9k6nvb7x721scl4"; depends=[ASSET]; };
  REDseq = derive2 { name="REDseq"; version="1.50.0"; sha256="15lx6sjw8rm0lrvyjfq3n4nq0r6rlgwvnm6bafd86a1dii934gf8"; depends=[AnnotationDbi BiocGenerics Biostrings BSgenome BSgenome_Celegans_UCSC_ce2 ChIPpeakAnno IRanges multtest]; };
  REMP = derive2 { name="REMP"; version="1.28.0"; sha256="1ss4170nxif8942095nk5lv1knqf082i4nlxsr3kyvf8ghqn2gmd"; depends=[AnnotationHub BiocGenerics BiocParallel Biostrings BSgenome caret doParallel foreach GenomeInfoDb GenomicRanges impute IRanges iterators kernlab minfi org_Hs_eg_db ranger readr rtracklayer S4Vectors settings SummarizedExperiment]; };
  RESOLVE = derive2 { name="RESOLVE"; version="1.6.0"; sha256="12ax0f3vasppwn5z10fr2mhhaaiyiii5qi3ll4yzsn7qmy02ya52"; depends=[Biostrings BSgenome BSgenome_Hsapiens_1000genomes_hs37d5 data_table GenomeInfoDb GenomicRanges ggplot2 glmnet gridExtra IRanges lsa MutationalPatterns nnls reshape2 S4Vectors]; };
  RGMQL = derive2 { name="RGMQL"; version="1.24.0"; sha256="1p7s17i18ql3b8yvg6pmcz62ql18ncd3hqk0rganmahfbd91idby"; depends=[BiocGenerics data_table dplyr GenomicRanges glue httr plyr RGMQLlib rJava rtracklayer S4Vectors xml2]; };
  RGSEA = derive2 { name="RGSEA"; version="1.38.0"; sha256="1jz3m6yvk1mybac5xyhpk9vvssnm9iq1mfk2aj32hv338q7cj8js"; depends=[BiocGenerics]; };
  RGraph2js = derive2 { name="RGraph2js"; version="1.32.0"; sha256="1lb8kbqcimpivpzrxbcnlw8pdjzfq45nhhy7pdq7nvx9r5yrcks2"; depends=[digest graph rjson whisker]; };
  RITAN = derive2 { name="RITAN"; version="1.28.0"; sha256="1jvwvgdqgxlnccf8k2mc1ihg4nasdqbl0pnm7khw3px39b1bnlzl"; depends=[AnnotationFilter BgeeDB dynamicTreeCut EnsDb_Hsapiens_v86 ensembldb GenomicFeatures ggplot2 gplots gridExtra gsubfn hash igraph knitr linkcomm MCL plotrix png RColorBrewer reshape2 RITANdata sqldf STRINGdb]; };
  RIVER = derive2 { name="RIVER"; version="1.28.0"; sha256="0clqr2h7cf00lzj1y405hfyc9i1aadssrzhrzl4wp1r4774rpw4z"; depends=[Biobase ggplot2 glmnet pROC]; };
  RImmPort = derive2 { name="RImmPort"; version="1.32.0"; sha256="0kvl9ivf0y7wjkaj7a5qbn9hv9ghbl00xm55i30p4vsvk8q32h3s"; depends=[data_table DBI dplyr plyr reshape2 RSQLite sqldf]; };
  RJMCMCNucleosomes = derive2 { name="RJMCMCNucleosomes"; version="1.28.0"; sha256="0w9d61zd6g3c8dp9i68nw8rmbnrf6lfa86m9a7ydkf54w7p33fsk"; depends=[BiocGenerics BiocParallel consensusSeekeR GenomeInfoDb GenomicRanges IRanges Rcpp S4Vectors]; };
  RLMM = derive2 { name="RLMM"; version="1.66.0"; sha256="1ihqlag1gxw08rg1ii2mpxg8gnwsxyg3ggd3k8fjnlqd6zsbvdq9"; depends=[MASS]; };
  RLassoCox = derive2 { name="RLassoCox"; version="1.12.0"; sha256="14zw0xnssh17c6v4qy3b81qrv453r2ayjnq62d1ix695xl7q2g43"; depends=[glmnet igraph Matrix survival]; };
  RMassBank = derive2 { name="RMassBank"; version="3.14.0"; sha256="05ymkjk6hkilm4wn7qn6dh1gf4pxp3zk339fbi10jri8ar0ilbls"; depends=[assertthat Biobase ChemmineOB ChemmineR data_table digest enviPat glue httr logger MSnbase mzR R_utils rcdk Rcpp readJDX rjson S4Vectors webchem XML yaml]; };
  RNAAgeCalc = derive2 { name="RNAAgeCalc"; version="1.16.0"; sha256="1h221flwa8b4dchw3b65cx7z11744cljzimqc2pv991dp21bvhnk"; depends=[AnnotationDbi ggplot2 impute org_Hs_eg_db recount SummarizedExperiment]; };
  RNASeqPower = derive2 { name="RNASeqPower"; version="1.44.0"; sha256="0jv1cm4j467gjx6j297h60yj7xd4ax71v2rgm65sibswbnxvbfa1"; depends=[]; };
  RNAdecay = derive2 { name="RNAdecay"; version="1.24.0"; sha256="1bf0mgj1n38wqapabbw9d74s5099sqlpkhb9yd9p8w48hwfdk4nc"; depends=[ggplot2 gplots nloptr scales TMB]; };
  RNAinteract = derive2 { name="RNAinteract"; version="1.52.0"; sha256="18jxg1wxa4z8ik9g7q3rr6mijrl1vk4b7wnkxs5pll6qz97mh726"; depends=[abind Biobase cellHTS2 geneplotter gplots hwriter ICS ICSNP lattice latticeExtra limma locfit RColorBrewer splots]; };
  RNAmodR = derive2 { name="RNAmodR"; version="1.18.0"; sha256="0c4ndc7r3rpk8gmd0n4n5q0x72cz3ja48sq4w3w9ahn05l9qql2v"; depends=[BiocGenerics BiocParallel Biostrings BSgenome colorRamps GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 Gviz IRanges matrixStats Modstrings RColorBrewer reshape2 ROCR Rsamtools rtracklayer S4Vectors txdbmaker]; };
  RNAmodR_AlkAnilineSeq = derive2 { name="RNAmodR.AlkAnilineSeq"; version="1.18.0"; sha256="1czaa3y8xzadrj1f8h1y4f0xvpb12s8l64k5lxhvp77s1gcxqcxm"; depends=[BiocGenerics GenomicRanges Gviz IRanges RNAmodR S4Vectors]; };
  RNAmodR_ML = derive2 { name="RNAmodR.ML"; version="1.18.0"; sha256="1xcpjq8w81gw52fjb5ijdlf2k94qwqf6s6c8h6y6rja1csqpkn9i"; depends=[BiocGenerics GenomicRanges IRanges ranger RNAmodR S4Vectors]; };
  RNAmodR_RiboMethSeq = derive2 { name="RNAmodR.RiboMethSeq"; version="1.18.0"; sha256="0qcl95c22kwn0prhznk2s97aisapq0pldcvp2mvckh5wi2jqrbbp"; depends=[BiocGenerics GenomicRanges Gviz IRanges RNAmodR S4Vectors]; };
  RNAsense = derive2 { name="RNAsense"; version="1.18.0"; sha256="1ynaylwxb1vcwx5g14sw1lz6sidnbhc0gb4z3i8gz1yr32mpnmgl"; depends=[ggplot2 NBPSeq qvalue SummarizedExperiment]; };
  RNAseqCovarImpute = derive2 { name="RNAseqCovarImpute"; version="1.2.0"; sha256="1gy7kmhp7hzv75hi1n8lcgsqqwwr7nm6r50rccqmswky5g6wd9nb"; depends=[Biobase BiocGenerics BiocParallel dplyr edgeR foreach limma magrittr mice rlang]; };
  ROC = derive2 { name="ROC"; version="1.80.0"; sha256="074c6jg0dyr3hckizpg56f8ij8szj43cx6x5bbw7a01xdjdc70yb"; depends=[knitr]; };
  ROCpAI = derive2 { name="ROCpAI"; version="1.16.0"; sha256="1nisrspdl4m6q9hpxhd49dxhfsi27znh4alcvc7gbhlqmbi0q9cs"; depends=[boot fission knitr SummarizedExperiment]; };
  ROSeq = derive2 { name="ROSeq"; version="1.16.0"; sha256="1rs3dfgsm7bznvjyajdkkvi3zdd84barkq78ma09vg02n7x6zkfc"; depends=[edgeR limma pbmcapply]; };
  ROTS = derive2 { name="ROTS"; version="1.32.0"; sha256="1s9hr64gpz08j638wlglcmk6c8yyj1hzrgddiphklkapc1asr320"; depends=[Biobase Rcpp]; };
  ROntoTools = derive2 { name="ROntoTools"; version="2.32.0"; sha256="0idclyk1dwpmfksf9l9ms4nwpin1flw50bafxa0pqlh9fdj5bz0z"; depends=[boot graph KEGGgraph KEGGREST Rgraphviz]; };
  RPA = derive2 { name="RPA"; version="1.60.0"; sha256="0v1jkny311ba43fz7x4i94ddm5hq9281gfj6wkr3disdbxjqgj37"; depends=[affy BiocGenerics BiocStyle phyloseq rmarkdown]; };
  RProtoBufLib = derive2 { name="RProtoBufLib"; version="2.16.0"; sha256="1vhp43l2iknljy240kzgvckkzbg186nkfdd1m3la9fnf9sqr33z9"; depends=[]; };
  RRHO = derive2 { name="RRHO"; version="1.44.0"; sha256="132mwv1qc32gbdjm8825aqd5l1f64hx78kqcbb6a347ch9c9pmwv"; depends=[VennDiagram]; };
  RSVSim = derive2 { name="RSVSim"; version="1.44.0"; sha256="1w79dsv2z8i7m58pbih52sfh8adr9gl5j94j4k8vhaj4288jba0d"; depends=[Biostrings GenomicRanges IRanges ShortRead]; };
  RSeqAn = derive2 { name="RSeqAn"; version="1.24.0"; sha256="0jc2abpjq2w7f22qj9izd98xckz7zsjx516g5ygdrik3r47hgh6x"; depends=[Rcpp]; };
  RTCA = derive2 { name="RTCA"; version="1.56.0"; sha256="078bh47vfkr5a0qvhnjadjzd0ph3pg32dv1r3ssvz9fq8qg4g0hy"; depends=[Biobase gtools RColorBrewer]; };
  RTCGA = derive2 { name="RTCGA"; version="1.34.0"; sha256="1a967id4anjzpdlbdd8a85fvb1z7mcr759pr91aashv12bzzhnk0"; depends=[assertthat data_table dplyr ggplot2 ggthemes htmltools knitr purrr RCurl rmarkdown rvest scales stringi survival survminer viridis XML xml2]; };
  RTCGAToolbox = derive2 { name="RTCGAToolbox"; version="2.34.0"; sha256="0l4idk6gsrnm7laj1xkm6jwmyy5l90kphm21zk7y33cpnp2ryjwr"; depends=[BiocGenerics data_table DelayedArray GenomeInfoDb GenomicRanges httr RaggedExperiment RCurl RJSONIO rvest S4Vectors stringr SummarizedExperiment TCGAutils]; };
  RTN = derive2 { name="RTN"; version="2.28.0"; sha256="09zd8z3wn26r7bamzq17slamydr73aqlx94zi0273npfggcwv4n1"; depends=[car data_table igraph IRanges limma minet mixtools pheatmap pwr RedeR S4Vectors snow SummarizedExperiment viper]; };
  RTNduals = derive2 { name="RTNduals"; version="1.28.0"; sha256="0idr55acbdi7bbcds9vp0sjv1px8dsmycll7z92f7l2xrk1mgyhp"; depends=[RTN]; };
  RTNsurvival = derive2 { name="RTNsurvival"; version="1.28.0"; sha256="1545jbis4gpcggw320kkrh7s2dllw4rwpq0qc95zm9v9yjxzzzk6"; depends=[data_table dunn_test egg ggplot2 pheatmap RColorBrewer RTN RTNduals scales survival]; };
  RTopper = derive2 { name="RTopper"; version="1.50.0"; sha256="14y4qvx5iyiqghw4cwn1k3sn7i788iakfzssl0gqal0r6npdh9ib"; depends=[Biobase limma multtest]; };
  RUVSeq = derive2 { name="RUVSeq"; version="1.38.0"; sha256="0i91kjwransy6l217rmxfzfchb43h1sjk8ygf0y8a3rv6rp7ylfd"; depends=[Biobase EDASeq edgeR MASS]; };
  RUVcorr = derive2 { name="RUVcorr"; version="1.36.0"; sha256="05fga28l65h21b84pn6gn6vrgglnvpblmrz551qj2djrmzda3pn1"; depends=[BiocParallel bladderbatch corrplot gridExtra lattice MASS psych reshape2 snowfall]; };
  RUVnormalize = derive2 { name="RUVnormalize"; version="1.38.0"; sha256="109q8cywgzxyc31hzjx73arffdhasblg7wk5gfwqcqfv2120r99c"; depends=[Biobase RUVnormalizeData]; };
  RVS = derive2 { name="RVS"; version="1.26.0"; sha256="10j84lhap7c74scar3gmk983zi6lhl8zvawp9ap46qf8wrpnqp4k"; depends=[GENLIB gRain kinship2 R_utils snpStats]; };
  RadioGx = derive2 { name="RadioGx"; version="2.8.0"; sha256="0ykw5hm48fh6xqxdfgmjjbqdd5hp4dmhnykg3zkmb9wrcfp4zx7f"; depends=[assertthat Biobase BiocGenerics BiocParallel caTools CoreGx data_table downloader magicaxis matrixStats RColorBrewer reshape2 S4Vectors scales SummarizedExperiment]; };
  RaggedExperiment = derive2 { name="RaggedExperiment"; version="1.28.0"; sha256="1mzjc52naf6brffv6d2bak16y3ygz9lsk8yqgcfa44180bslz3xx"; depends=[BiocBaseUtils BiocGenerics GenomeInfoDb GenomicRanges IRanges Matrix MatrixGenerics S4Vectors SummarizedExperiment]; };
  RankProd = derive2 { name="RankProd"; version="3.30.0"; sha256="0y9c833zn3l4492cl7b71x5g7q6kr81zh2f3v9x4l52q6mw6l5qh"; depends=[gmp Rmpfr]; };
  RareVariantVis = derive2 { name="RareVariantVis"; version="2.32.0"; sha256="08siw7yzx1jd3cgg2mirc27ycpk6wdvv4vcwzln1ps35nkhy52in"; depends=[BiocGenerics BSgenome BSgenome_Hsapiens_UCSC_hg19 GenomeInfoDb GenomicFeatures GenomicRanges GenomicScores googleVis gtools IRanges phastCons100way_UCSC_hg19 S4Vectors SummarizedExperiment TxDb_Hsapiens_UCSC_hg19_knownGene VariantAnnotation]; };
  Rarr = derive2 { name="Rarr"; version="1.4.0"; sha256="0ks576wqzywlk07wlb116sjzs1b1103mwrd5410qya13mwq6yx62"; depends=[httr jsonlite paws_storage R_utils stringr]; };
  RbcBook1 = derive2 { name="RbcBook1"; version="1.72.0"; sha256="00y8lzfz7z9zmzrg9qyiwkwbcn2xsg6xiphzjvz02j34ghig43ng"; depends=[Biobase graph rpart]; };
  Rbec = derive2 { name="Rbec"; version="1.12.0"; sha256="1cf5g2q8ak45ipb0cvgnrqy4s131g9lnchzs6g7mfj7b6ynkgp6d"; depends=[dada2 doParallel foreach ggplot2 Rcpp readr]; };
  Rbowtie = derive2 { name="Rbowtie"; version="1.44.0"; sha256="1in3qani4xh5m5zpbny1nbsvh60ahs36bas8hplkdpd8hnhfla56"; depends=[]; };
  Rbowtie2 = derive2 { name="Rbowtie2"; version="2.10.0"; sha256="1spwpbx1jjfjcxbwjkl64ccp9k8xs6lm828546qddsgp20y3bhgp"; depends=[magrittr Rsamtools]; };
  Rbwa = derive2 { name="Rbwa"; version="1.8.0"; sha256="0qbipwgdfgzdkrlvwmx0nbi8v4frv0r2vl8hd2mypf205mv4qb8b"; depends=[]; };
  RcisTarget = derive2 { name="RcisTarget"; version="1.24.0"; sha256="1856jnvqacr12j5hnnl4w2abjjd7qvkz7cs8yhbnqpy1896wki0v"; depends=[arrow AUCell BiocGenerics data_table dplyr GenomeInfoDb GenomicRanges GSEABase R_utils S4Vectors SummarizedExperiment tibble zoo]; };
  Rcollectl = derive2 { name="Rcollectl"; version="1.4.0"; sha256="1i1a8imzdangilmww0r3l75npc19xbija9lj13nbwj1vnwb85cpa"; depends=[ggplot2 lubridate processx]; };
  Rcpi = derive2 { name="Rcpi"; version="1.40.0"; sha256="1zi7fsq02cac60z92nan9374b2l07qx2fa7jrcngs0xgjcw6k31n"; depends=[Biostrings doParallel foreach GOSemSim pwalign RCurl rjson rlang]; };
  Rcwl = derive2 { name="Rcwl"; version="1.20.0"; sha256="02pxjcf3bbvv4hh2vr796b3pyd8vxh5v4g2bkgicsc0jw40554rr"; depends=[basilisk batchtools BiocParallel codetools DiagrammeR R_utils S4Vectors shiny yaml]; };
  RcwlPipelines = derive2 { name="RcwlPipelines"; version="1.20.0"; sha256="1bivrgd9f431spg0gv1achs258rmyxcnggn7zh63z2nlskxx3pp1"; depends=[BiocFileCache git2r httr rappdirs Rcwl S4Vectors]; };
  Rdisop = derive2 { name="Rdisop"; version="1.64.0"; sha256="1gcg441mp6bdnzjkh4gg6zgjn4hnw5i8mdcvb1hfim4hsc7sdsxv"; depends=[Rcpp]; };
  ReUseData = derive2 { name="ReUseData"; version="1.4.0"; sha256="1dai0mxsnjmr6gs465mljfnydai276i5zjjbgxphgas1z3iv9sz6"; depends=[basilisk BiocFileCache jsonlite Rcwl RcwlPipelines S4Vectors yaml]; };
  ReactomeContentService4R = derive2 { name="ReactomeContentService4R"; version="1.12.0"; sha256="1qqrkki9v3ggwqv88n7w3wp50y4gxvkixrg1sad23vl08jd0rkl6"; depends=[data_table doParallel foreach httr jsonlite magick]; };
  ReactomeGSA = derive2 { name="ReactomeGSA"; version="1.18.0"; sha256="188c0vrbq01gy4zhsf9wsg9amjf9434g0fzf3lnwzxdm0xzw2b33"; depends=[Biobase dplyr ggplot2 gplots httr jsonlite progress RColorBrewer tidyr]; };
  ReactomeGraph4R = derive2 { name="ReactomeGraph4R"; version="1.12.0"; sha256="17xkrqyp5wdsdd0gpplsk3qfsr8sgf1ap0vz6v34xlhbmzdq3rs8"; depends=[data_table doParallel foreach getPass jsonlite magrittr neo4r purrr ReactomeContentService4R rlang]; };
  ReactomePA = derive2 { name="ReactomePA"; version="1.48.0"; sha256="0i5jrdzg6zcs1jx0lryq8d467lxi1hvd1x6p74ywwxga88p46zk6"; depends=[AnnotationDbi DOSE enrichplot ggplot2 ggraph graphite gson igraph reactome_db]; };
  ReadqPCR = derive2 { name="ReadqPCR"; version="1.50.0"; sha256="1bv65my3azx1v16qdcb5s0bycykdga6kfpvhj8av6g0cyrq6xj8y"; depends=[Biobase]; };
  RedeR = derive2 { name="RedeR"; version="3.0.0"; sha256="1x4435mcm4f8w5a7y54269f3npwxz26347v77ngmnjj32nfch8l9"; depends=[igraph scales]; };
  RedisParam = derive2 { name="RedisParam"; version="1.6.0"; sha256="1j4h509gl9grgy8npj2fxnvm2kx0q41bcfid26v7p91c6i33gzsj"; depends=[BiocParallel futile_logger redux withr]; };
  RegEnrich = derive2 { name="RegEnrich"; version="1.14.0"; sha256="1gma0xsw72pi3shxlnvx3ynkvys2hv3g95gx2x0whdsarxwki34h"; depends=[BiocParallel BiocSet BiocStyle DESeq2 DOSE dplyr fgsea ggplot2 limma magrittr randomForest reshape2 S4Vectors SummarizedExperiment tibble WGCNA]; };
  RegionalST = derive2 { name="RegionalST"; version="1.2.0"; sha256="0gzc1m6ds6bnkq26bpq9i0mbpyw2biwnn07d30cdzipfsxbjdhlk"; depends=[assertthat BayesSpace colorspace dplyr fgsea ggplot2 gridExtra magrittr RColorBrewer S4Vectors scater Seurat shiny SingleCellExperiment SummarizedExperiment tibble TOAST]; };
  RepViz = derive2 { name="RepViz"; version="1.20.0"; sha256="1rww94wdpswy27i26zn25g8j2s1l14xmljhkz6fl45jmkfn4cqxa"; depends=[biomaRt GenomicRanges IRanges Rsamtools S4Vectors]; };
  Repitools = derive2 { name="Repitools"; version="1.50.0"; sha256="1ypiiwi7kp5j8ayz3c9b1gzsy7kd1iw3zv35hrg7pb5fry63dg9g"; depends=[BiocGenerics Biostrings BSgenome cluster DNAcopy edgeR GenomeInfoDb GenomicAlignments GenomicRanges gplots gsmoothr IRanges MASS Rsamtools Rsolnp rtracklayer S4Vectors]; };
  ReportingTools = derive2 { name="ReportingTools"; version="2.44.0"; sha256="0vq46dj2v3imjmf6cw8mab6k9v4rrc5r2vh100jjlsm3z15gvl17"; depends=[annotate AnnotationDbi Biobase BiocGenerics Category DESeq2 edgeR ggbio ggplot2 GOstats GSEABase hwriter IRanges knitr lattice limma PFAM_db R_utils XML]; };
  ResidualMatrix = derive2 { name="ResidualMatrix"; version="1.14.0"; sha256="1q27zzl570q22nk4xjpnpa674p76hzzvilynx9i6awnzs10zjggn"; depends=[DelayedArray Matrix S4Vectors]; };
  Rfastp = derive2 { name="Rfastp"; version="1.14.0"; sha256="1zk2zm08nv8i9q39s7dbppd3pk5kxki17x00971wwsfvl261hnsy"; depends=[ggplot2 Rcpp reshape2 Rhtslib rjson zlibbioc]; };
  RgnTX = derive2 { name="RgnTX"; version="1.6.0"; sha256="15mw5j8wjbzygqj1v5pqh0dz6n37y55p08yi884hpw7sn9dwkfsw"; depends=[GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 IRanges regioneR S4Vectors TxDb_Hsapiens_UCSC_hg19_knownGene]; };
  Rgraphviz = derive2 { name="Rgraphviz"; version="2.48.0"; sha256="09i174a867vqyb6677sj88lk6bpfc4ajsmjgjkd7f7q66j46q655"; depends=[graph]; };
  Rhdf5lib = derive2 { name="Rhdf5lib"; version="1.26.0"; sha256="0q4ix3nzr69pmwm6vdna51yxlqi8frch0xyv6wmiy35n67d4fcab"; depends=[]; };
  Rhisat2 = derive2 { name="Rhisat2"; version="1.20.0"; sha256="0a7k9p08gq537275r7dfzh34ycxx8h4fmac74jimwhsa420793r5"; depends=[GenomicRanges SGSeq txdbmaker]; };
  Rhtslib = derive2 { name="Rhtslib"; version="3.0.0"; sha256="0497b43wxcfqyr4k30f0xq7yillb4fz0gqiqxxp66gvnqv4wiv6v"; depends=[zlibbioc]; };
  RiboCrypt = derive2 { name="RiboCrypt"; version="1.10.0"; sha256="0ay8yl1fc4iizina4aqvyjr6iqpc7dr457l7w4p3849d3i160304"; depends=[BiocGenerics BiocParallel Biostrings bslib data_table dplyr GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 htmlwidgets httr IRanges jsonlite knitr markdown NGLVieweR ORFik plotly RCurl rlang shiny shinycssloaders shinyhelper shinyjqui stringr]; };
  RiboDiPA = derive2 { name="RiboDiPA"; version="1.12.0"; sha256="0an2hbjzi514kb0m4l8i46w4zyxp510vw2f3xdmldjdyv5yw4v1z"; depends=[BiocFileCache BiocGenerics data_table DESeq2 doParallel elitism foreach GenomicAlignments GenomicFeatures GenomicRanges ggplot2 IRanges matrixStats qvalue Rcpp reldist Rsamtools S4Vectors txdbmaker]; };
  RiboProfiling = derive2 { name="RiboProfiling"; version="1.34.0"; sha256="0h0sxmg4knsarh7w7dnp539cs9sfxjw4413q1yyyz3gbi23bzww4"; depends=[BiocGenerics Biostrings data_table GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggbio ggplot2 IRanges plyr reshape2 Rsamtools rtracklayer S4Vectors sqldf]; };
  Rmagpie = derive2 { name="Rmagpie"; version="1.60.0"; sha256="146db5sz1kkgpwdarll8ca6ndb0l48hxnfi7cp39zllrhwfmwzdm"; depends=[Biobase e1071 kernlab pamr]; };
  Rmmquant = derive2 { name="Rmmquant"; version="1.22.0"; sha256="1jshnr4xph4glrk0pl3r8pklxnzg495m74yx25xjqg8avwahwvw4"; depends=[apeglm BiocStyle DESeq2 devtools GenomicRanges org_Mm_eg_db Rcpp S4Vectors SummarizedExperiment TBX20BamSubset TxDb_Mmusculus_UCSC_mm9_knownGene]; };
  RnBeads = derive2 { name="RnBeads"; version="2.22.0"; sha256="0v7dzmbyskq0vmja09dncg1g50dl3iycg883swb7lfvi4xzr42vj"; depends=[BiocGenerics cluster ff fields GenomicRanges ggplot2 gplots gridExtra illuminaio IRanges limma MASS matrixStats methylumi plyr S4Vectors]; };
  RnaSeqSampleSize = derive2 { name="RnaSeqSampleSize"; version="2.14.0"; sha256="0zfmrpfnz8bka6z4408bl5mzv1yr7648qizy8b93qc903vx3zhvs"; depends=[biomaRt dplyr edgeR ggplot2 ggpubr heatmap3 KEGGREST matlab Rcpp recount RnaSeqSampleSizeData SummarizedExperiment tidyr tidyselect]; };
  Rnits = derive2 { name="Rnits"; version="1.38.0"; sha256="1c4l6flfyamnjhb3givw4icx6cbl2pnrvscalrywyhxpqk64cirv"; depends=[affy Biobase boot ggplot2 impute limma qvalue reshape2]; };
  RolDE = derive2 { name="RolDE"; version="1.8.0"; sha256="11ishff55z086qgc28vxamc5blfxs95qn758f5cgvf9rfr8h64rz"; depends=[doParallel doRNG foreach matrixStats nlme qvalue rngtools ROTS SummarizedExperiment]; };
  Rqc = derive2 { name="Rqc"; version="1.38.0"; sha256="0szd5ygcvpaiwqss8galxzxpslpfh93rk42s865v0qpv0s9v9x0l"; depends=[BiocGenerics BiocParallel BiocStyle Biostrings biovizBase GenomicAlignments GenomicFiles ggplot2 IRanges knitr markdown plyr Rcpp reshape2 Rsamtools S4Vectors shiny ShortRead]; };
  Rsamtools = derive2 { name="Rsamtools"; version="2.20.0"; sha256="04lz0dzwmgi8j9wyspbmjln6yb5fv4f538nqyrfd31d0g16937b8"; depends=[BiocGenerics BiocParallel Biostrings bitops GenomeInfoDb GenomicRanges IRanges Rhtslib S4Vectors XVector zlibbioc]; };
  Rsubread = derive2 { name="Rsubread"; version="2.18.0"; sha256="0nd5b1k0dsxpf93wqx01fgbvk40jcfs7b7w692bsx620lm42ipfg"; depends=[Matrix]; };
  Rtpca = derive2 { name="Rtpca"; version="1.14.0"; sha256="1prrc1ys74pfr0cgn9qx2is9zzpybvapi34xp1yxnq1xcgynkrxv"; depends=[Biobase dplyr fdrtool ggplot2 pROC tibble tidyr]; };
  Rtreemix = derive2 { name="Rtreemix"; version="1.66.0"; sha256="0rlhrzpyv95mm9wdqmn2wqqkgb3nm3irqrffba81ip7mn9fmdjsw"; depends=[Biobase graph Hmisc]; };
  Rvisdiff = derive2 { name="Rvisdiff"; version="1.2.0"; sha256="1s4jhg79s2q71v2y5h6ihwr05giyv987kncr22g60frsdsav2hcm"; depends=[edgeR]; };
  S4Arrays = derive2 { name="S4Arrays"; version="1.4.1"; sha256="0wdzp1q6hyks4afm217yl2n770jsqaqxix71imni1r0qbxdfkdwl"; depends=[abind BiocGenerics crayon IRanges Matrix S4Vectors]; };
  S4Vectors = derive2 { name="S4Vectors"; version="0.42.0"; sha256="0aq0j70sl8a42gc1abxdwdy74mi9k4krz56yrbpwqv78x42cjjm9"; depends=[BiocGenerics]; };
  SAIGEgds = derive2 { name="SAIGEgds"; version="2.4.0"; sha256="1pkg72pqqlmj51vjz5p3qrj3b2lqqnzmh4ddbrn73rs66sgm9zkp"; depends=[CompQuadForm gdsfmt Matrix Rcpp RcppArmadillo RcppParallel SeqArray survey]; };
  SARC = derive2 { name="SARC"; version="1.2.0"; sha256="11hiz7lzhkp2459c92x0i9kia7yc8zbl7n7c3wd66g2pbzfjzv6f"; depends=[data_table DescTools GenomicFeatures GenomicRanges ggplot2 gridExtra gtable IRanges metap multtest plotly plyranges RaggedExperiment RColorBrewer reshape2 scales tidyverse]; };
  SBGNview = derive2 { name="SBGNview"; version="1.18.0"; sha256="1smxxwyc03m6bbw1l5bzfl6q2g2f93z53z8iyk42lwkfp26zv6i5"; depends=[AnnotationDbi bookdown httr igraph KEGGREST knitr pathview Rdpack rmarkdown rsvg SBGNview_data SummarizedExperiment xml2]; };
  SBMLR = derive2 { name="SBMLR"; version="2.0.0"; sha256="1h0pwlq229hbvh6ab2sjv67zd24i15xn4jh7k8s64faw4gw8ji14"; depends=[deSolve XML]; };
  SC3 = derive2 { name="SC3"; version="1.32.0"; sha256="0ylpk7jjqmy7g1s5ah5zwrcmqplhjm0rpnw74kn5mdra3d7xdsnr"; depends=[BiocGenerics cluster doParallel doRNG e1071 foreach ggplot2 pheatmap Rcpp RcppArmadillo robustbase ROCR rrcov S4Vectors shiny SingleCellExperiment SummarizedExperiment WriteXLS]; };
  SCAN_UPC = derive2 { name="SCAN.UPC"; version="2.46.0"; sha256="1awsy1xfsl90yxqc2qir7p51d34jddcqg5q02cc0925w6yqanaci"; depends=[affy affyio Biobase Biostrings foreach GEOquery IRanges MASS oligo sva]; };
  SCANVIS = derive2 { name="SCANVIS"; version="1.18.0"; sha256="0nywyi5bp3qgh9xaydhpsdh5nvq0ybfvjqhygrs7lypanj4n1k7p"; depends=[IRanges plotrix RCurl rtracklayer]; };
  SCArray = derive2 { name="SCArray"; version="1.12.0"; sha256="1a5343azhqfagkf2cbszaisn505aqc49hxki42qb92n5x3bgqbnb"; depends=[BiocParallel BiocSingular DelayedArray DelayedMatrixStats gdsfmt Matrix S4Vectors SingleCellExperiment SummarizedExperiment]; };
  SCArray_sat = derive2 { name="SCArray.sat"; version="1.4.0"; sha256="0y94f6rbjzn2jqkww808vysfdk6j3qw81v79w087d3adiywkl9xj"; depends=[BiocGenerics BiocParallel BiocSingular DelayedArray gdsfmt Matrix S4Vectors SCArray Seurat SeuratObject SummarizedExperiment]; };
  SCBN = derive2 { name="SCBN"; version="1.22.0"; sha256="0bf18gc9ysi35x73ij4s4r3zmg0vys4hy4gy2x0hkxlrm4gpgx4r"; depends=[]; };
  SCFA = derive2 { name="SCFA"; version="1.14.0"; sha256="1avbvkky6m5f5cbfbhabapidz6ypngddrkg2dss7y0a7gy48634x"; depends=[BiocParallel cluster coro glmnet igraph Matrix matrixStats psych RhpcBLASctl survival torch]; };
  SCOPE = derive2 { name="SCOPE"; version="1.16.0"; sha256="1x7kad59rav9rrjkqkdfbziflx3bngclz4mwkfkf53yl8km62pw0"; depends=[BiocGenerics Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 DescTools DNAcopy doParallel foreach GenomeInfoDb GenomicRanges gplots IRanges RColorBrewer Rsamtools S4Vectors]; };
  SCnorm = derive2 { name="SCnorm"; version="1.26.0"; sha256="11q8g6fmsib4ms2ks003v9qc8n4rzchbcd02xnbah97qgxrmicbm"; depends=[BiocGenerics BiocParallel cluster data_table forcats ggplot2 moments quantreg S4Vectors SingleCellExperiment SummarizedExperiment]; };
  SDAMS = derive2 { name="SDAMS"; version="1.24.0"; sha256="088k6bxdmkwv4zw8pvj2f4hl4b5jhrmlnvsh9mcqga7pmf5ir96b"; depends=[qvalue SummarizedExperiment trust]; };
  SELEX = derive2 { name="SELEX"; version="1.36.0"; sha256="0j4y7mijxgkcj89q1qf0ab9rmsaxzmvbxlnpy0x29bam424vzc73"; depends=[Biostrings rJava]; };
  SEtools = derive2 { name="SEtools"; version="1.18.0"; sha256="0j4pn85icyf1jwcfjr8r9049lrhglp3s5ighmcp9hvsjws04scis"; depends=[BiocParallel circlize data_table DESeq2 edgeR Matrix openxlsx pheatmap S4Vectors sechm SummarizedExperiment sva]; };
  SGSeq = derive2 { name="SGSeq"; version="1.38.0"; sha256="1i3dg3fn648mzy49m15vbzr3wfnk91xyph5j4sc7ss978l25h17n"; depends=[AnnotationDbi BiocGenerics Biostrings GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges igraph IRanges Rsamtools rtracklayer RUnit S4Vectors SummarizedExperiment]; };
  SIAMCAT = derive2 { name="SIAMCAT"; version="2.8.0"; sha256="00l9w395fg6r8p2jzz85x1djlj4h7y86dgs8x5xf14bn1am9q0sh"; depends=[beanplot corrplot glmnet gridBase gridExtra infotheo lgr LiblineaR lmerTest matrixStats mlr3 mlr3learners mlr3tuning paradox phyloseq pROC progress PRROC RColorBrewer scales stringr]; };
  SICtools = derive2 { name="SICtools"; version="1.34.0"; sha256="0ymk18aj4r0526xqqkrvd75p4jrgrq2wshx7mqh2wj7nizjfn8fv"; depends=[Biostrings doParallel GenomicRanges IRanges matrixStats plyr Rsamtools stringr]; };
  SIM = derive2 { name="SIM"; version="1.74.0"; sha256="01mvdwhbpikpg8vfxr73nsshdr185ds80yjavzss53cwkv6zvp4h"; depends=[globaltest quantreg quantsmooth]; };
  SIMAT = derive2 { name="SIMAT"; version="1.36.0"; sha256="1gwcr7lfsnzvlx0v93adlxmzdcx9rwfmhacpz3m8q26jm4vjmqib"; depends=[ggplot2 mzR Rcpp reshape2]; };
  SIMD = derive2 { name="SIMD"; version="1.22.0"; sha256="1sw7mw4nravw4v9mhfcppnz0867szaynjs10lhpjs2a0p6mll0px"; depends=[edgeR methylMnM statmod]; };
  SIMLR = derive2 { name="SIMLR"; version="1.30.0"; sha256="18mld0yvkmy1znsv3dkch6f8x9h9j20zm3qq84ggw0wsbgrrcm1z"; depends=[Matrix pracma Rcpp RcppAnnoy RSpectra]; };
  SLqPCR = derive2 { name="SLqPCR"; version="1.70.0"; sha256="0xr0kjy2bn8cprj4p7c9bi7wsrvfx6bxymnvdz5c50s9hc35h2ky"; depends=[]; };
  SMAD = derive2 { name="SMAD"; version="1.20.0"; sha256="0rj4f38nlr3a5fmf0dqhqi7iln78lkvghv4w8yr2kcavnsl4lzar"; depends=[dplyr magrittr Rcpp RcppAlgos tidyr]; };
  SMITE = derive2 { name="SMITE"; version="1.32.0"; sha256="0dp4yas2gdwnvvbxdkid61j9c2a32cfcn3iw9nwijp6aqlv9rrv9"; depends=[AnnotationDbi Biobase BioNet geneLenDataBase GenomicRanges ggplot2 goseq Hmisc igraph IRanges KEGGREST org_Hs_eg_db plyr reactome_db S4Vectors scales]; };
  SNAGEE = derive2 { name="SNAGEE"; version="1.44.0"; sha256="001afmi0hpjih8h8dl5w0llmccgd9g7lrz80fs7m2f3avz9hf2lc"; depends=[SNAGEEdata]; };
  SNPRelate = derive2 { name="SNPRelate"; version="1.38.0"; sha256="0znk9vvnahkypmkrx82r1ryp41xr675b4ddpgx0nl3708xhncz5f"; depends=[gdsfmt]; };
  SNPediaR = derive2 { name="SNPediaR"; version="1.30.0"; sha256="1p33fmjdpscc42wicx23xg1jbg2m18msf4rhg9pr52n6yzr42b8v"; depends=[jsonlite RCurl]; };
  SNPhood = derive2 { name="SNPhood"; version="1.34.0"; sha256="1jniag2yq67y6s9cw8722a58k86i0nbksc2dxyv3pni2wwdka6r6"; depends=[BiocGenerics BiocParallel Biostrings checkmate cluster data_table DESeq2 GenomeInfoDb GenomicRanges ggplot2 gridExtra IRanges lattice RColorBrewer reshape2 Rsamtools S4Vectors scales SummarizedExperiment VariantAnnotation]; };
  SOMNiBUS = derive2 { name="SOMNiBUS"; version="1.12.0"; sha256="0p33r1ibpnln2rn4ls23prg7nmxznki9x7jc7qg3gc5fxip5b9n6"; depends=[annotatr BiocManager bsseq data_table GenomeInfoDb GenomicRanges ggplot2 IRanges Matrix mgcv reshape2 rtracklayer S4Vectors tidyr VGAM yaml]; };
  SPEM = derive2 { name="SPEM"; version="1.44.0"; sha256="0ysgwvx8wlq3b1qyw5dlsxxglvrmbahf4r98g6shv6y8pj50yhg7"; depends=[Biobase Rsolnp]; };
  SPIA = derive2 { name="SPIA"; version="2.56.0"; sha256="0ank9y5p21whqfni56kx662cli8508s6l89d83c54nimyn1kqs48"; depends=[KEGGgraph]; };
  SPIAT = derive2 { name="SPIAT"; version="1.6.0"; sha256="09bs0pm2gd8fgb2q5kihwnb3dgaxkwjxl86di7kdj0im5hyr0d1h"; depends=[apcluster dbscan dittoSeq dplyr ggplot2 gridExtra gtools mmand pracma RANN raster reshape2 rlang sp SpatialExperiment spatstat_explore spatstat_geom SummarizedExperiment tibble vroom]; };
  SPLINTER = derive2 { name="SPLINTER"; version="1.30.0"; sha256="1x9lak4s7rhllnczr4n7a88haq4a36pmxbrgd2m7v69nyzxlab9w"; depends=[biomaRt Biostrings BSgenome_Mmusculus_UCSC_mm9 GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 googleVis Gviz IRanges plyr pwalign S4Vectors seqLogo stringr]; };
  SPOTlight = derive2 { name="SPOTlight"; version="1.8.0"; sha256="08cnlm6l34gp2spy2x08jr6abm58wrana1930jzwvvgm0mql9nzb"; depends=[ggplot2 Matrix matrixStats NMF nnls SingleCellExperiment sparseMatrixStats]; };
  SPsimSeq = derive2 { name="SPsimSeq"; version="1.14.0"; sha256="09n39bgbx8xkngdc056lz1p20375w7fljmgnkg7vacjvp288y2pi"; depends=[edgeR fitdistrplus Hmisc limma mvtnorm phyloseq SingleCellExperiment WGCNA]; };
  SQLDataFrame = derive2 { name="SQLDataFrame"; version="1.18.0"; sha256="1fdf6dvrkg5cjnlh9466dnmqjfg7dq7dj06qjc61zyshlvslxlwh"; depends=[BiocGenerics DBI DelayedArray duckdb RSQLite S4Vectors]; };
  SRAdb = derive2 { name="SRAdb"; version="1.66.0"; sha256="0qvqixmn8am90a4n5ydva630kkxr735y6kdcikp1q0k8pxxvbm0j"; depends=[GEOquery graph RCurl RSQLite]; };
  STATegRa = derive2 { name="STATegRa"; version="1.40.0"; sha256="1m78hixyjavvryfcyd5g3f898r7hcn1cwdwbv3i2b9yj7z6r7knv"; depends=[affy Biobase calibrate edgeR foreach ggplot2 gplots gridExtra limma MASS]; };
  STRINGdb = derive2 { name="STRINGdb"; version="2.16.4"; sha256="02fim09w9s38hvgp1g3fxqabd5r2fjysljlfrya2nr17drqkzqyx"; depends=[gplots hash httr igraph plotrix plyr png RColorBrewer sqldf]; };
  STdeconvolve = derive2 { name="STdeconvolve"; version="1.8.0"; sha256="0pyyxmh4bnavsdw6riv72y5m8l53mfr0lpiy9mh0qn57rlmw5fr9"; depends=[BiocParallel clue ggplot2 Matrix mgcv reshape2 scatterpie slam topicmodels viridis]; };
  SUITOR = derive2 { name="SUITOR"; version="1.6.0"; sha256="0wricb7fi87lrmasljhz0l7ya22yq3a2c6654k4v3x11z9zb2pl6"; depends=[BiocParallel ggplot2]; };
  SVMDO = derive2 { name="SVMDO"; version="1.4.0"; sha256="11cn7kffgssbjk307vxjr6i2cs94fn6hhz09dbx5qgg89m4gsdgi"; depends=[AnnotationDbi BSDA caret caTools data_table DOSE dplyr e1071 golem klaR nortest org_Hs_eg_db shiny shinyFiles shinytitle sjmisc SummarizedExperiment survival]; };
  SWATH2stats = derive2 { name="SWATH2stats"; version="1.34.0"; sha256="052nzh5rhq3sp6vyibbiz2li32lnd5c719kqkdhwjsc8y3pcir00"; depends=[biomaRt data_table ggplot2 reshape2]; };
  SamSPECTRAL = derive2 { name="SamSPECTRAL"; version="1.58.0"; sha256="05r3gl6ai9x0g8l2zl1p8fz7phklna82w0csvaiy8p5063p71gla"; depends=[]; };
  Scale4C = derive2 { name="Scale4C"; version="1.26.0"; sha256="1h2swrs0vj9nzcr748jbk8c4bpnyc0gcq8bn5cyhd8lbd2b9xhv0"; depends=[GenomicRanges IRanges smoothie SummarizedExperiment]; };
  ScaledMatrix = derive2 { name="ScaledMatrix"; version="1.12.0"; sha256="0c6sp5nps31ygrr7lxxc2gbg19qsk107v23x8f6acqk1xwlsfppi"; depends=[DelayedArray Matrix S4Vectors]; };
  Sconify = derive2 { name="Sconify"; version="1.24.0"; sha256="07bz9bi71qxaipiw998jshm0wcwllhxfjmdxxxwg520rhmfs1g04"; depends=[dplyr flowCore FNN ggplot2 magrittr readr Rtsne tibble]; };
  ScreenR = derive2 { name="ScreenR"; version="1.6.0"; sha256="00zaca403yk2dhsxhch51zcv5iwjgpnpz495ly98wv64hsm8b671"; depends=[dplyr edgeR ggplot2 ggvenn limma magrittr patchwork purrr rlang scales stringr tibble tidyr tidyselect]; };
  SemDist = derive2 { name="SemDist"; version="1.38.0"; sha256="03qzsrxwnsb8spfmnsyiyz83r8476lq17n3a8hrm6i13hxdqps29"; depends=[annotate AnnotationDbi GO_db]; };
  SeqArray = derive2 { name="SeqArray"; version="1.44.0"; sha256="1g8867y66f8ihr0w2shc17wxnavnkwn9y25f850nwvnn9nsbk88k"; depends=[Biostrings gdsfmt GenomeInfoDb GenomicRanges IRanges S4Vectors]; };
  SeqGSEA = derive2 { name="SeqGSEA"; version="1.44.0"; sha256="0nxrl5ip289hqnp4g85njm55kpk81kr1l87la6r3r5h0qx5x01cy"; depends=[Biobase biomaRt DESeq2 doParallel]; };
  SeqGate = derive2 { name="SeqGate"; version="1.14.0"; sha256="1qmrjqv9iky9bwq1d6bmmn4wnqlw8g352i154fjhgpwl8zvl75jk"; depends=[BiocManager GenomicRanges S4Vectors SummarizedExperiment]; };
  SeqSQC = derive2 { name="SeqSQC"; version="1.26.0"; sha256="0xsgr7wfy9qyjffb6spm0szknk3rbcx89k1ypdymybnjmndcslqf"; depends=[e1071 ExperimentHub gdsfmt GenomicRanges GGally ggplot2 IRanges plotly RColorBrewer reshape2 rmarkdown S4Vectors SNPRelate]; };
  SeqVarTools = derive2 { name="SeqVarTools"; version="1.42.0"; sha256="1mx3b21595n1v1fhy7lv67kdlxc2qdmkj0lm8gdnrs0l5f88jpgy"; depends=[Biobase BiocGenerics data_table gdsfmt GenomicRanges GWASExactHW IRanges logistf Matrix S4Vectors SeqArray]; };
  SharedObject = derive2 { name="SharedObject"; version="1.18.0"; sha256="133bn22q0lbyfr9dmsv462wajmh9v3108w42fc16q97lf9nf2023"; depends=[BH BiocGenerics Rcpp]; };
  ShortRead = derive2 { name="ShortRead"; version="1.62.0"; sha256="0x5iqx2k2xs5rwjch0bpcb8pgc0nhb571991yahdr8hsxwbas3jm"; depends=[Biobase BiocGenerics BiocParallel Biostrings GenomeInfoDb GenomicAlignments GenomicRanges hwriter IRanges lattice latticeExtra pwalign Rhtslib Rsamtools S4Vectors XVector zlibbioc]; };
  SiPSiC = derive2 { name="SiPSiC"; version="1.4.0"; sha256="158sjiza9wqd5ipl3fm1gx63qas6j3rqlk6ayw5hnf0al1g64z5q"; depends=[Matrix SingleCellExperiment]; };
  SigCheck = derive2 { name="SigCheck"; version="2.36.0"; sha256="1bnvk2v1mh615xhqab6129bgvv24azq9h9r1n2b3msbadwd0by1d"; depends=[Biobase BiocParallel e1071 MLInterfaces survival]; };
  SigFuge = derive2 { name="SigFuge"; version="1.42.0"; sha256="1g262p2b0bapzvaknhnklxm6wvy1fdir631p34x433qvlwz9ss9i"; depends=[GenomicRanges ggplot2 matlab reshape sigclust]; };
  SigsPack = derive2 { name="SigsPack"; version="1.18.0"; sha256="1dq3zqbbz5wbw2yf8w1sjgf1kd1nxap808ydvjr63zn10rm6m3vm"; depends=[Biobase Biostrings BSgenome GenomeInfoDb GenomicRanges quadprog rtracklayer SummarizedExperiment VariantAnnotation]; };
  SimBu = derive2 { name="SimBu"; version="1.6.0"; sha256="1may613jla4id0g9w4nxsfqm36ma82gmzykvnifi5hwa63jvi7pb"; depends=[basilisk BiocParallel data_table dplyr ggplot2 Matrix phyloseq proxyC RColorBrewer RCurl reticulate sparseMatrixStats SummarizedExperiment tidyr]; };
  SimFFPE = derive2 { name="SimFFPE"; version="1.16.0"; sha256="1ccdk4g16bh1j420dspnh6il98j6ck6w2vgmqi82mf6js3cakd2z"; depends=[Biostrings doParallel dplyr foreach GenomicRanges IRanges Rsamtools truncnorm]; };
  SingleCellAlleleExperiment = derive2 { name="SingleCellAlleleExperiment"; version="1.0.0"; sha256="02dp5xcp7h93cl5k65qpwgcd4ygimcv5im9s9zqzpzmsf3q8gd5l"; depends=[BiocParallel DelayedArray Matrix S4Vectors SingleCellExperiment SummarizedExperiment]; };
  SingleCellExperiment = derive2 { name="SingleCellExperiment"; version="1.26.0"; sha256="09sbk0r9g55x8fbvv5rbrygdw3km4bbrj9x0abqwld2nxnxq1q3n"; depends=[BiocGenerics DelayedArray GenomicRanges S4Vectors SummarizedExperiment]; };
  SingleCellSignalR = derive2 { name="SingleCellSignalR"; version="1.16.0"; sha256="0w7zj2fb45hzjx44kgn9qs3ab69v29vpl41nxvy931m32ndl5j04"; depends=[BiocManager circlize data_table edgeR foreach gplots igraph limma multtest pheatmap Rtsne scran stringr]; };
  SingleMoleculeFootprinting = derive2 { name="SingleMoleculeFootprinting"; version="1.12.0"; sha256="1hyqnzz05f2i0r2b5qs1j58py3b042aiffyd6ns2hkrgnr62yldw"; depends=[BiocGenerics Biostrings BSgenome data_table GenomeInfoDb GenomicRanges IRanges plyr QuasR RColorBrewer]; };
  SingleR = derive2 { name="SingleR"; version="2.6.0"; sha256="0l33bsi1zfj7f4hzlivhh89phhx0qscrwd08c28mqvcyp91mhq16"; depends=[beachmat BiocNeighbors BiocParallel BiocSingular DelayedArray DelayedMatrixStats Matrix Rcpp S4Vectors SummarizedExperiment]; };
  SomaticSignatures = derive2 { name="SomaticSignatures"; version="2.40.0"; sha256="0yvn2famnyxkxnw4r1vr0vma6ym9kb343vqgaqkvcp3zpm1fi0p8"; depends=[Biobase Biostrings GenomeInfoDb GenomicRanges ggbio ggplot2 IRanges NMF pcaMethods proxy reshape2 S4Vectors VariantAnnotation]; };
  SpaceMarkers = derive2 { name="SpaceMarkers"; version="1.0.0"; sha256="02pb6jka0irzxmw0bzjns7jfc9jbbslg3c1xxjq1v9zf3s3is21a"; depends=[ape hdf5r jsonlite Matrix matrixStats matrixTests qvalue rstatix spatstat_explore spatstat_geom]; };
  SpacePAC = derive2 { name="SpacePAC"; version="1.42.0"; sha256="0a445gvv0x6c8765p5fjmd21i8ivnqr0jkzz6cczwkds7m0436az"; depends=[iPAC]; };
  Spaniel = derive2 { name="Spaniel"; version="1.18.0"; sha256="03iil9iyvv9sqmkpi3hn1vqx7a2187h1ng7bzfs302dj9dpcqfaj"; depends=[dplyr DropletUtils ggplot2 igraph jpeg jsonlite magrittr png S4Vectors scater scran Seurat shiny SingleCellExperiment SummarizedExperiment]; };
  SparseArray = derive2 { name="SparseArray"; version="1.4.8"; sha256="1ahwv6ih1700h1sccv9wh7hr5bhdif0ji5jbmsprnhjxfgn6xidm"; depends=[BiocGenerics IRanges Matrix MatrixGenerics matrixStats S4Arrays S4Vectors XVector]; };
  SparseSignatures = derive2 { name="SparseSignatures"; version="2.14.0"; sha256="1wq1vs94pw2zb896pn6z1zk67adrqwlhrcy1sp3s3m9jw0yaiqbw"; depends=[Biostrings BSgenome data_table GenomeInfoDb GenomicRanges ggplot2 gridExtra IRanges NMF nnlasso nnls reshape2]; };
  SpatialCPie = derive2 { name="SpatialCPie"; version="1.20.0"; sha256="0pj6m66a1qw3hi37qa4k7gpl1b8r731v9wflzr0q1yw9gwl99nh8"; depends=[colorspace data_table digest dplyr ggforce ggiraph ggplot2 ggrepel igraph lpSolve purrr readr rlang shiny shinycssloaders shinyjs shinyWidgets SummarizedExperiment tibble tidyr tidyselect zeallot]; };
  SpatialDecon = derive2 { name="SpatialDecon"; version="1.14.0"; sha256="0p49dwp380d642xkx92wlan70crb3jinsiawnkiif6i6ry7xdxjd"; depends=[Biobase GeomxTools logNormReg Matrix repmis SeuratObject]; };
  SpatialExperiment = derive2 { name="SpatialExperiment"; version="1.14.0"; sha256="0f04azs6wscibcpbmc1m21wjswmgr2b8gvd1n2yavya1li0xxm4r"; depends=[BiocFileCache BiocGenerics magick rjson S4Vectors SingleCellExperiment SummarizedExperiment]; };
  SpatialFeatureExperiment = derive2 { name="SpatialFeatureExperiment"; version="1.6.1"; sha256="0p7wqhn72p538wrlkd51mac87sjd5bh2k0k9vkvvvpfls02vfx01"; depends=[Biobase BiocGenerics BiocNeighbors BiocParallel data_table DropletUtils EBImage lifecycle Matrix rjson rlang S4Vectors sf sfheaders SingleCellExperiment SpatialExperiment spdep SummarizedExperiment terra zeallot]; };
  SpatialOmicsOverlay = derive2 { name="SpatialOmicsOverlay"; version="1.4.0"; sha256="041kdamj3whw24c6075n0f1xxxba160s3c3kq2z7dqxwzks1k6rz"; depends=[base64enc Biobase BiocFileCache data_table dplyr EBImage GeomxTools ggplot2 ggtext magick pbapply plotrix RBioFormats readxl S4Vectors scattermore stringr XML]; };
  SpeCond = derive2 { name="SpeCond"; version="1.58.0"; sha256="0gj9f0rycd4d8ixmivgy4ijs9pikjyhsj47k5hi8lgk9w7hnk8p4"; depends=[Biobase fields hwriter mclust RColorBrewer]; };
  Spectra = derive2 { name="Spectra"; version="1.14.1"; sha256="0mvfndd7n7varrzmv9cd3ygwbdn97x5qcgmzcxc6hr76lnkwp8al"; depends=[BiocGenerics BiocParallel fs IRanges MetaboCoreUtils MsCoreUtils ProtGenerics S4Vectors]; };
  SpectralTAD = derive2 { name="SpectralTAD"; version="1.20.0"; sha256="0rk15gs7bs5xhgl0k5qa0zyh0dcd2pr5qmqcrzvfh49bhbaylqbx"; depends=[BiocParallel cluster dplyr GenomicRanges HiCcompare magrittr Matrix PRIMME]; };
  SpliceWiz = derive2 { name="SpliceWiz"; version="1.6.0"; sha256="11pad2gdra4bq6is34d7981f6vb4wzsmvihgf08514d1598qn1cc"; depends=[AnnotationHub BiocFileCache BiocGenerics BiocParallel Biostrings BSgenome data_table DelayedArray DelayedMatrixStats DT fst genefilter GenomeInfoDb GenomicRanges ggplot2 HDF5Array heatmaply htmltools IRanges magrittr matrixStats NxtIRFdata ompBAM patchwork pheatmap plotly progress R_utils RColorBrewer Rcpp RcppProgress rhandsontable rhdf5 rtracklayer rvest S4Vectors scales shiny shinydashboard shinyFiles shinyWidgets stringi SummarizedExperiment zlibbioc]; };
  SplicingFactory = derive2 { name="SplicingFactory"; version="1.12.0"; sha256="1iwkkbxviain77a64x41hc97c9bl77ayjpbjpkvmhwjh4hfdl9b7"; depends=[SummarizedExperiment]; };
  SplicingGraphs = derive2 { name="SplicingGraphs"; version="1.44.0"; sha256="1k4j23i7ffw1q18y48jhhj7g5k3vjihq619np2y7p7xc9wv0d45g"; depends=[BiocGenerics BiocParallel GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges graph igraph IRanges Rgraphviz Rsamtools S4Vectors]; };
  SpotClean = derive2 { name="SpotClean"; version="1.6.1"; sha256="1wq1igfyadmzszacnwx8rfhm82xslzqzjkvx6xigs1fng0c7yn61"; depends=[dplyr ggplot2 Matrix RColorBrewer readbitmap rhdf5 rjson rlang S4Vectors Seurat SpatialExperiment SummarizedExperiment tibble viridis]; };
  SpotSweeper = derive2 { name="SpotSweeper"; version="1.0.0"; sha256="1jkc37ymip3r29fh041mfa2bq17qhxq7mp0i35zrjh2lzm83qxas"; depends=[BiocNeighbors escheR ggplot2 MASS SingleCellExperiment spatialEco SpatialExperiment SummarizedExperiment]; };
  Statial = derive2 { name="Statial"; version="1.6.0"; sha256="0lzr0vc4zl5ryhs17l866w261ya9kxm7hx86g6xv16wr6fbw3mgv"; depends=[BiocParallel concaveman data_table dplyr ggplot2 limma magrittr plotly purrr ranger S4Vectors SingleCellExperiment SpatialExperiment spatstat_explore spatstat_geom stringr SummarizedExperiment tibble tidyr tidyselect]; };
  Streamer = derive2 { name="Streamer"; version="1.50.0"; sha256="0biizsjg9ysr2d1kyh962znikvgwli0zf0jn8khbs4prakjxmjyn"; depends=[BiocGenerics graph RBGL]; };
  Structstrings = derive2 { name="Structstrings"; version="1.20.0"; sha256="1ka9kixhgc9vfar18fzd8vd5ydmdkqa2s6xsmhlh927zrijs3vz9"; depends=[BiocGenerics Biostrings crayon IRanges S4Vectors stringi stringr XVector]; };
  StructuralVariantAnnotation = derive2 { name="StructuralVariantAnnotation"; version="1.20.0"; sha256="0hnpa6ykfasp2hshqdny29dyw6y9dib4rsm379fm7n8iami1rjp1"; depends=[assertthat BiocGenerics Biostrings dplyr GenomeInfoDb GenomicFeatures GenomicRanges IRanges pwalign rlang rtracklayer S4Vectors stringr SummarizedExperiment VariantAnnotation]; };
  SubCellBarCode = derive2 { name="SubCellBarCode"; version="1.20.0"; sha256="1r4w6mbzfsgf6bd0x5g8chjqji7dll2vjdvzrlbzgdhb710hmil0"; depends=[AnnotationDbi caret e1071 ggplot2 ggrepel gridExtra networkD3 org_Hs_eg_db Rtsne scatterplot3d]; };
  SummarizedExperiment = derive2 { name="SummarizedExperiment"; version="1.34.0"; sha256="02cvgq2vgg0gz1gxkc4vnr9jg4wkj32bl5a1qyv77wnw2b2v5hp0"; depends=[Biobase BiocGenerics DelayedArray GenomeInfoDb GenomicRanges IRanges Matrix MatrixGenerics S4Arrays S4Vectors]; };
  Summix = derive2 { name="Summix"; version="2.10.0"; sha256="01ri56flnhca5bkl2j5mc3siqpwhi0771h742xjwssbk1rmcp5im"; depends=[BEDASSLE dplyr magrittr nloptr randomcoloR scales tibble tidyselect visNetwork]; };
  SurfR = derive2 { name="SurfR"; version="1.0.0"; sha256="0qbvwjcrxkv0as18af6436fi1i19gbvyj22fgglxmbmckxfwv14b"; depends=[assertr BiocFileCache BiocStyle biomaRt DESeq2 dplyr edgeR enrichR ggplot2 ggrepel gridExtra httr knitr magrittr metaRNASeq openxlsx rhdf5 scales SPsimSeq stringr SummarizedExperiment TCGAbiolinks tidyr venn]; };
  SwathXtend = derive2 { name="SwathXtend"; version="2.26.0"; sha256="11k6a5m73pj49ahync5773w4wbz5mb27nss531nbqj738lnfidv4"; depends=[e1071 lattice openxlsx VennDiagram]; };
  SynExtend = derive2 { name="SynExtend"; version="1.16.0"; sha256="1nikkhwyh61mhjxhrg4f1g402rzm9lc7jbaclcpp6v2rmd9dxqmw"; depends=[Biostrings DBI DECIPHER IRanges RSQLite S4Vectors]; };
  SynMut = derive2 { name="SynMut"; version="1.20.0"; sha256="075r77ih2k29hl7ccn3v6104fk4spk733ph6jp2zxjimffnj7rj5"; depends=[BiocGenerics Biostrings seqinr stringr]; };
  TADCompare = derive2 { name="TADCompare"; version="1.14.0"; sha256="1k80xwbc3h4994f8j5qr52rn2hk2l5qz1196r1kpn6m47h80fq6c"; depends=[cluster cowplot dplyr ggplot2 ggpubr HiCcompare magrittr Matrix PRIMME RColorBrewer reshape2 tidyr]; };
  TAPseq = derive2 { name="TAPseq"; version="1.16.0"; sha256="0nz70a68cn8is0hp8srp7clqwwnr045mpibz4yazskia7lhbm73i"; depends=[BiocGenerics BiocParallel Biostrings BSgenome dplyr GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges S4Vectors tidyr]; };
  TBSignatureProfiler = derive2 { name="TBSignatureProfiler"; version="1.16.0"; sha256="1vjd9dwnr6m867d1ax6kwj4w5qs5y81fzrnnjl6xkl2ch3g48jpk"; depends=[ASSIGN BiocParallel ComplexHeatmap DESeq2 DT edgeR gdata ggplot2 GSVA magrittr RColorBrewer reshape2 rlang ROCit S4Vectors singscore SummarizedExperiment]; };
  TCC = derive2 { name="TCC"; version="1.44.0"; sha256="0j9b6q7h3w7kcpwbc3f9aabj8jrh5hwpx8rnd415rq7fakq3ix6p"; depends=[DESeq2 edgeR ROC]; };
  TCGAbiolinks = derive2 { name="TCGAbiolinks"; version="2.32.0"; sha256="1br2dxi5rvl8z5myrnj4dnfh8xgksrqjyy0fsqh3vjspifvis4ih"; depends=[biomaRt data_table downloader dplyr GenomicRanges ggplot2 httr IRanges jsonlite knitr plyr purrr R_utils readr rvest S4Vectors stringr SummarizedExperiment TCGAbiolinksGUI_data tibble tidyr XML xml2]; };
  TCGAutils = derive2 { name="TCGAutils"; version="1.24.0"; sha256="0fmz1lfpn8ws584q4xlicg897qs36wgr78crw0d9415ci6qqb4r8"; depends=[AnnotationDbi BiocBaseUtils BiocGenerics GenomeInfoDb GenomicDataCommons GenomicFeatures GenomicRanges IRanges MultiAssayExperiment RaggedExperiment rvest S4Vectors stringr SummarizedExperiment xml2]; };
  TCseq = derive2 { name="TCseq"; version="1.28.0"; sha256="014al1b58rkfy1cqxwf3xgzrbdvqv2x3ac2clqmj1262ygrmiw5v"; depends=[BiocGenerics cluster e1071 edgeR GenomicAlignments GenomicRanges ggplot2 IRanges locfit reshape2 Rsamtools SummarizedExperiment]; };
  TDbasedUFE = derive2 { name="TDbasedUFE"; version="1.4.0"; sha256="1q1ljwwkhkqq2pbzm60kkhyqrqixljcw0vqajbpwk68gmc8sxwyz"; depends=[GenomicRanges MOFAdata readr rTensor shiny tximport tximportData]; };
  TDbasedUFEadv = derive2 { name="TDbasedUFEadv"; version="1.4.0"; sha256="1iiil5vn95bsldxigjlyqraivrnwlajkn18y0880qinrbfcwpidz"; depends=[Biobase DOSE enrichplot enrichR GenomicRanges hash RTCGA rTensor shiny STRINGdb TDbasedUFE]; };
  TEKRABber = derive2 { name="TEKRABber"; version="1.8.0"; sha256="0ivbj063awdh41ldj6cl68ydx8y4jv8wzwwxr67iwhxdgpcwlwx8"; depends=[apeglm biomaRt DESeq2 doParallel dplyr foreach GenomeInfoDb magrittr Rcpp rtracklayer SCBN]; };
  TENxIO = derive2 { name="TENxIO"; version="1.6.0"; sha256="1bghch637h2cckkb8czzjnvn4vlh4cjk8izy6079wq8p39zr10fx"; depends=[BiocBaseUtils BiocGenerics BiocIO GenomeInfoDb GenomicRanges Matrix MatrixGenerics R_utils RCurl readr S4Vectors SingleCellExperiment SummarizedExperiment]; };
  TEQC = derive2 { name="TEQC"; version="4.26.0"; sha256="1cvc4lrnhkr5l5x0cpjmzxj449lmkw337a8gpan73yvj2p0r7axg"; depends=[Biobase BiocGenerics hwriter IRanges Rsamtools]; };
  TFARM = derive2 { name="TFARM"; version="1.26.0"; sha256="1l2763lxgda628i6abl2hp5ghxzzw1lk3zmd15aibf8rfl9cghha"; depends=[arules fields GenomicRanges gplots stringr]; };
  TFBSTools = derive2 { name="TFBSTools"; version="1.42.0"; sha256="0bmmsgmx7159bdrflykkis0v4z1ixwlnmw1kx0y0kw15lw3cjnsh"; depends=[Biobase BiocGenerics BiocParallel Biostrings BSgenome caTools CNEr DBI DirichletMultinomial GenomeInfoDb GenomicRanges gtools IRanges pwalign RSQLite rtracklayer S4Vectors seqLogo TFMPvalue XML XVector]; };
  TFEA_ChIP = derive2 { name="TFEA.ChIP"; version="1.24.0"; sha256="0xn176h7dfb3sbg913xzwj3c2ymzf7i0y2an19zjvynk49xq12ph"; depends=[biomaRt dplyr GenomicFeatures GenomicRanges IRanges org_Hs_eg_db R_utils]; };
  TFHAZ = derive2 { name="TFHAZ"; version="1.26.0"; sha256="1d1b1ylrqkskxkmyfjh1334kdmn0j6h5wdwcafaly1rkr4kihpl0"; depends=[GenomicRanges IRanges ORFik S4Vectors]; };
  TFutils = derive2 { name="TFutils"; version="1.24.0"; sha256="0n0szdh09zr7866pl6y5zps6izlylhh1n20zkv7xsaq91hsw9g52"; depends=[AnnotationDbi BiocFileCache dplyr DT GSEABase httr magrittr miniUI org_Hs_eg_db readxl rjson Rsamtools shiny]; };
  TIN = derive2 { name="TIN"; version="1.36.0"; sha256="06dmy5yjskaisibbr4qlw7bdbwj8v1b09c28v4wzd86a2554hywp"; depends=[aroma_affymetrix data_table impute squash stringr WGCNA]; };
  TMixClust = derive2 { name="TMixClust"; version="1.26.0"; sha256="0p88kdl9v2q6wabr31v26q0612qcw1q5s71zbanamx0s2xsvyjgh"; depends=[Biobase BiocParallel cluster flexclust gss mvtnorm SPEM zoo]; };
  TOAST = derive2 { name="TOAST"; version="1.18.0"; sha256="0srjx9z59a65nhrxbzxzxnkyn28zskc6z4p8drihq1lhw6mvdp4r"; depends=[corpcor doParallel EpiDISH GGally ggplot2 limma nnls quadprog SummarizedExperiment tidyr]; };
  TOP = derive2 { name="TOP"; version="1.4.0"; sha256="1lj7a9kry3ca2iz231si0vfxbnib5wqj5x4ldvb1l1wfjhdf4x2p"; depends=[assertthat caret ClassifyR directPA doParallel dplyr ggnewscale ggplot2 ggraph ggrepel ggthemes glmnet Hmisc igraph latex2exp limma magrittr plotly pROC purrr reshape2 statmod stringr survival tibble tidygraph tidyr]; };
  TPP = derive2 { name="TPP"; version="3.32.0"; sha256="1pfnk9zfd7d8ysiiawj1xbcq7vck5xs25jy2rz94mpwvgpxkvkif"; depends=[Biobase biobroom broom data_table doParallel dplyr foreach futile_logger ggplot2 gridExtra knitr limma magrittr MASS mefa nls2 openxlsx plyr purrr RColorBrewer RCurl reshape2 rmarkdown stringr tibble tidyr VennDiagram VGAM]; };
  TPP2D = derive2 { name="TPP2D"; version="1.20.0"; sha256="1r9fgxd6jx0py4727yzcn73hr3x7rjxmi5yli57wyd07hk0p3w0y"; depends=[BiocParallel doParallel dplyr foreach ggplot2 limma MASS openxlsx RCurl stringr tidyr]; };
  TREG = derive2 { name="TREG"; version="1.8.0"; sha256="0yf2fmswkl01ymr1zy23d2xg8j8vb5q28grqb0r83b11rkxhfhqm"; depends=[Matrix purrr rafalib SummarizedExperiment]; };
  TRESS = derive2 { name="TRESS"; version="1.10.0"; sha256="1dv6xr625gr7jf7rk7fxhfyxgkrkc71mdc3fvzi98r23sk1h62xq"; depends=[AnnotationDbi GenomicFeatures GenomicRanges IRanges Matrix matrixStats Rsamtools rtracklayer S4Vectors]; };
  TRONCO = derive2 { name="TRONCO"; version="2.36.0"; sha256="1dliwyjsvwr6cjf4cp3w7h46ac4fzd7hnfw4nsb330ajdr38ri0y"; depends=[bnlearn circlize doParallel foreach gridExtra gtable gtools igraph iterators R_matlab RColorBrewer Rgraphviz scales xtable]; };
  TSAR = derive2 { name="TSAR"; version="1.2.0"; sha256="1bnyrrc92m4v35ar640pnm1fb3cq3hlp8lpwicrzbv8dvyzsxw43"; depends=[dplyr ggplot2 ggpubr jsonlite magrittr mgcv minpack_lm openxlsx plotly readxl rhandsontable shiny shinyjs shinyWidgets stringr tidyr]; };
  TSCAN = derive2 { name="TSCAN"; version="1.42.0"; sha256="1s80n1yjmshy59ls607hp8hpq56hllbh0a4mbgvxd8bqh4njfc0j"; depends=[combinat DelayedArray fastICA ggplot2 gplots igraph Matrix mclust mgcv plyr S4Vectors shiny SingleCellExperiment SummarizedExperiment TrajectoryUtils]; };
  TTMap = derive2 { name="TTMap"; version="1.26.0"; sha256="0988hy3hr3cf7snj7k7d0gl0w4qg7ssk53pmvvng171b82m6szqw"; depends=[Biobase colorRamps rgl SummarizedExperiment]; };
  TVTB = derive2 { name="TVTB"; version="1.30.0"; sha256="0in5l9nq0br7c1n546wn29av5m25xxc82hvns5z8mshnnlk59pmn"; depends=[AnnotationFilter BiocGenerics BiocParallel Biostrings ensembldb ensemblVEP GenomeInfoDb GenomicRanges GGally ggplot2 Gviz IRanges limma reshape2 Rsamtools S4Vectors SummarizedExperiment VariantAnnotation]; };
  TargetDecoy = derive2 { name="TargetDecoy"; version="1.10.0"; sha256="1gys5v5sb3ypip82q9gw21dg5whllqdhh8i9zy48qrg4mh2jby1s"; depends=[ggplot2 ggpubr miniUI mzID mzR shiny]; };
  TargetScore = derive2 { name="TargetScore"; version="1.42.0"; sha256="124fy7q7y37jxasvnlk8sfkw307qs1wyafxvs3fmb3f3impffxsz"; depends=[Matrix pracma]; };
  TargetSearch = derive2 { name="TargetSearch"; version="2.6.1"; sha256="1q6v6pfkpcm23a39vgp9ysbqa6wwkwv9dgnxd6m8gjlq3azgsnf6"; depends=[assertthat ncdf4]; };
  TileDBArray = derive2 { name="TileDBArray"; version="1.14.0"; sha256="1hgwcxffg50nfjb3bpl00h7vhmfs1x15ly7sd0lpcnamk7f9c003"; depends=[DelayedArray Rcpp S4Vectors tiledb]; };
  TissueEnrich = derive2 { name="TissueEnrich"; version="1.24.1"; sha256="02amlvaf5v30x2swxhi4na4c623v00gb3q1bvlcqias9gaaizzim"; depends=[dplyr ggplot2 GSEABase SummarizedExperiment tidyr]; };
  TitanCNA = derive2 { name="TitanCNA"; version="1.42.0"; sha256="18ihvqn07g677r3facf43m69bnjx4i0s6w41h4mdn82hal0pfsx0"; depends=[BiocGenerics data_table dplyr foreach GenomeInfoDb GenomicRanges IRanges VariantAnnotation]; };
  ToxicoGx = derive2 { name="ToxicoGx"; version="2.8.0"; sha256="0b34d5js6w50bm5cl5v8ppfc0lljsbm1zbrqlc5qifc8lcyliq8a"; depends=[assertthat Biobase BiocGenerics BiocParallel caTools CoreGx data_table downloader dplyr ggplot2 jsonlite limma magrittr reshape2 S4Vectors scales SummarizedExperiment tibble tidyr]; };
  TrajectoryGeometry = derive2 { name="TrajectoryGeometry"; version="1.12.0"; sha256="102mhg46s6s95j98wsy0r6327riqhb5jcdzmksiwphsdpsp9c16s"; depends=[ggplot2 pracma rgl]; };
  TrajectoryUtils = derive2 { name="TrajectoryUtils"; version="1.12.0"; sha256="15q1mq48nclf2lqc2v769q79frrbm2l65d54vcqg06b861q2wq9h"; depends=[igraph Matrix S4Vectors SingleCellExperiment SummarizedExperiment]; };
  TransView = derive2 { name="TransView"; version="1.48.0"; sha256="1bk4h1sh2xdm67mkzsg2l0kgg88m5z39hxmshh0j2bybyyy07jkp"; depends=[BiocGenerics GenomicRanges gplots IRanges Rhtslib S4Vectors zlibbioc]; };
  TreeAndLeaf = derive2 { name="TreeAndLeaf"; version="1.16.0"; sha256="0fm1v6w73vs99smqk8i8b85pr38zlbpgyby6qh3s0xslxbyk6b32"; depends=[ape igraph RedeR]; };
  TreeSummarizedExperiment = derive2 { name="TreeSummarizedExperiment"; version="2.12.0"; sha256="0ygzw9nba5pxgrbib8sm7qwhzzm8m038banb0z7n42vkb1cb3d5i"; depends=[ape BiocGenerics BiocParallel Biostrings dplyr IRanges rlang S4Vectors SingleCellExperiment SummarizedExperiment treeio]; };
  Trendy = derive2 { name="Trendy"; version="1.26.0"; sha256="172hcq9zxah3m55j3kzpg5hvr06d656j1s8j3jcvksc0f3l9r990"; depends=[BiocParallel DT gplots magrittr S4Vectors segmented shiny shinyFiles SummarizedExperiment]; };
  TurboNorm = derive2 { name="TurboNorm"; version="1.52.0"; sha256="13096cp69y6vkn0gm13ssyzgp7fhvqggnipigdfdrpmvf8gcl881"; depends=[affy convert lattice limma marray]; };
  TypeInfo = derive2 { name="TypeInfo"; version="1.70.0"; sha256="0sx9z1wnlh6sj8gww0mxwavggkgj4zk23z8509pbch36acr6fgls"; depends=[]; };
  UCSC_utils = derive2 { name="UCSC.utils"; version="1.0.0"; sha256="0w9f5xd6ryniapbpcrpczn8wimph2154w45cvdgqfa3dv5qy379l"; depends=[httr jsonlite S4Vectors]; };
  UCell = derive2 { name="UCell"; version="2.8.0"; sha256="09r64rrydwgvvvq8f5vzvn7dsh24l9sa1if21wcimrl28ci1g1mv"; depends=[BiocNeighbors BiocParallel data_table Matrix SingleCellExperiment SummarizedExperiment]; };
  UMI4Cats = derive2 { name="UMI4Cats"; version="1.14.0"; sha256="1cf2jsmhsmw6i381wxnb0zsyhkr2mjlxlzpjnlfxyf4kr6n8k797"; depends=[annotate BiocFileCache BiocGenerics Biostrings BSgenome cowplot DESeq2 dplyr fda GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 IRanges magick magrittr org_Hs_eg_db R_utils rappdirs Rbowtie2 RColorBrewer regioneR reshape2 rlang Rsamtools S4Vectors scales ShortRead stringr SummarizedExperiment TxDb_Hsapiens_UCSC_hg19_knownGene zoo]; };
  UNDO = derive2 { name="UNDO"; version="1.46.0"; sha256="1h7bri3hkl99gll5vpamgp7x60afdmq8h1mqw4plr9ypxv2kljpj"; depends=[Biobase BiocGenerics boot MASS nnls]; };
  UPDhmm = derive2 { name="UPDhmm"; version="1.0.0"; sha256="0qa6d3c2gvhfq5shgdpsgzrghx8jwpvx6an8rvidl5p7nzhhdjgi"; depends=[GenomicRanges HMM IRanges S4Vectors VariantAnnotation]; };
  Ularcirc = derive2 { name="Ularcirc"; version="1.22.0"; sha256="0qzkvwg3gd9v9cqf3hmmyh4gzdqs5m6nxjjbnhqsdp6wshccdv4p"; depends=[AnnotationDbi AnnotationHub BiocGenerics Biostrings BSgenome data_table DT GenomeInfoDb GenomeInfoDbData GenomicAlignments GenomicFeatures GenomicRanges ggplot2 ggrepel gsubfn mirbase_db moments Organism_dplyr plotgardener R_utils S4Vectors shiny shinydashboard shinyFiles shinyjs yaml]; };
  UniProt_ws = derive2 { name="UniProt.ws"; version="2.44.0"; sha256="1vcbphksaanggig1yfmrihhw1a4fmy1cl7yq5w3z3lb6zik5rgx8"; depends=[AnnotationDbi BiocBaseUtils BiocFileCache BiocGenerics httpcache httr jsonlite progress rjsoncons RSQLite]; };
  Uniquorn = derive2 { name="Uniquorn"; version="2.24.0"; sha256="1f2hp395gfxnrf9mg8kqd6cjr9b651gzrj2bcfv5hx2qh0mh1z75"; depends=[data_table doParallel foreach GenomicRanges IRanges R_utils stringr VariantAnnotation WriteXLS]; };
  VAExprs = derive2 { name="VAExprs"; version="1.10.0"; sha256="0mcdh0xsqjpc3nj1xfps3y2r62ayh8ykgpyblqxp2n52f781hcbx"; depends=[CatEncoders DeepPINCS DiagrammeR keras mclust purrr scater SingleCellExperiment SummarizedExperiment tensorflow]; };
  VCFArray = derive2 { name="VCFArray"; version="1.20.0"; sha256="07z0zds9pqh7wi5zl8wsyxqrks5j182j0005c225y8n4qgwbmqk0"; depends=[BiocGenerics DelayedArray GenomicFiles GenomicRanges Rsamtools S4Vectors VariantAnnotation]; };
  VDJdive = derive2 { name="VDJdive"; version="1.6.0"; sha256="1ml175pk27msai86pnm8jyy8li7f5rkkqqfw1a9m9d850n7ry37h"; depends=[BiocParallel cowplot ggplot2 gridExtra IRanges Matrix RColorBrewer Rcpp S4Vectors SingleCellExperiment SummarizedExperiment]; };
  VERSO = derive2 { name="VERSO"; version="1.14.0"; sha256="1yixhbwa2wi3rddmyd37b9nznw4c7s36wz0mnzwqvx1n9w0zpdk3"; depends=[ape data_tree Rfast]; };
  VaSP = derive2 { name="VaSP"; version="1.16.0"; sha256="1gh0mgci2jadv3g0wc3li6d9rlaaqybdx148gkzwnjf0bmhqxz34"; depends=[ballgown cluster GenomeInfoDb GenomicAlignments GenomicRanges IRanges matrixStats Rsamtools S4Vectors]; };
  VanillaICE = derive2 { name="VanillaICE"; version="1.66.0"; sha256="0a9yzlwnyq9840w25gqsc0ijydifq6kbr7z9bzq74s7zqxzxkkqv"; depends=[Biobase BiocGenerics BSgenome_Hsapiens_UCSC_hg18 crlmm data_table foreach GenomeInfoDb GenomicRanges IRanges lattice MatrixGenerics matrixStats oligoClasses S4Vectors SummarizedExperiment]; };
  VarCon = derive2 { name="VarCon"; version="1.12.0"; sha256="1ns5sxb2qrh0y6hdg6qn6s1hl4d64cvsipl6mcwqiyka9lrlmlhy"; depends=[Biostrings BSgenome GenomicRanges ggplot2 IRanges shiny shinycssloaders shinyFiles]; };
  VariantAnnotation = derive2 { name="VariantAnnotation"; version="1.50.0"; sha256="0slvlhm65hkjspzlzs3gi04a6mlfwvda314z1nmzpdi3y5111fg7"; depends=[AnnotationDbi Biobase BiocGenerics Biostrings BSgenome DBI GenomeInfoDb GenomicFeatures GenomicRanges IRanges MatrixGenerics Rhtslib Rsamtools rtracklayer S4Vectors SummarizedExperiment XVector zlibbioc]; };
  VariantExperiment = derive2 { name="VariantExperiment"; version="1.18.1"; sha256="0wxhfd92cfh9rg99jrw9rg7vfqk8lf2ylkpki2jf59hlx8zzs2z9"; depends=[Biostrings DelayedArray DelayedDataFrame GDSArray gdsfmt GenomicRanges IRanges S4Vectors SeqArray SNPRelate SummarizedExperiment]; };
  VariantFiltering = derive2 { name="VariantFiltering"; version="1.40.0"; sha256="14kxlzgy71s8h34galx93q8kalspr1m23brssbr3wha0hxb0ghgd"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel Biostrings BSgenome DT GenomeInfoDb GenomicFeatures GenomicRanges GenomicScores graph Gviz IRanges RBGL Rsamtools S4Vectors shiny shinyjs shinythemes shinyTree SummarizedExperiment VariantAnnotation XVector]; };
  VariantTools = derive2 { name="VariantTools"; version="1.46.0"; sha256="1idil9vkd5risx9ahkagdacnj2g2a11gzsd7wmhg5gjmr77r53ww"; depends=[Biobase BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicFeatures GenomicRanges IRanges Matrix Rsamtools rtracklayer S4Vectors VariantAnnotation]; };
  VegaMC = derive2 { name="VegaMC"; version="3.42.0"; sha256="0jswscxb78g6j978361g4cmwlzlwfkyfx6i3p9fpny464i8gsfji"; depends=[Biobase biomaRt]; };
  VennDetail = derive2 { name="VennDetail"; version="1.20.0"; sha256="0987ljk70lsjhwzk3dxslg80ng8cnjhh02zr2raphyliys0msvxz"; depends=[dplyr futile_logger ggplot2 magrittr purrr tibble UpSetR VennDiagram]; };
  ViSEAGO = derive2 { name="ViSEAGO"; version="1.18.0"; sha256="06cqx88vndmgxb7vhn7w0kwkxrsn8hy3a3mz591pj48f3z0q9w16"; depends=[AnnotationDbi AnnotationForge biomaRt data_table dendextend DiagrammeR DT dynamicTreeCut fgsea ggplot2 GO_db GOSemSim heatmaply htmlwidgets igraph plotly processx R_utils RColorBrewer scales topGO UpSetR]; };
  VisiumIO = derive2 { name="VisiumIO"; version="1.0.0"; sha256="01yvahz20fkvf2mj0zjl04w0dzs5jf4snlmry8d5a9y3smkspqyv"; depends=[BiocBaseUtils BiocGenerics BiocIO jsonlite S4Vectors SpatialExperiment SummarizedExperiment TENxIO]; };
  Voyager = derive2 { name="Voyager"; version="1.6.0"; sha256="0nvcp1wcrisiljj4w61ykz82a2l8c9vx8ixh209v2ih004wyy1y1"; depends=[BiocParallel bluster ggnewscale ggplot2 lifecycle Matrix matrixStats memuse patchwork rlang RSpectra S4Vectors scales scico sf SingleCellExperiment SpatialExperiment SpatialFeatureExperiment spdep SummarizedExperiment terra]; };
  VplotR = derive2 { name="VplotR"; version="1.14.0"; sha256="1cg5ifl2k2134k5lhxfvsr4xm31w0bdg0rzy8yb5k77gldilb0il"; depends=[cowplot GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges magrittr RColorBrewer reshape2 Rsamtools S4Vectors zoo]; };
  Wrench = derive2 { name="Wrench"; version="1.22.0"; sha256="1nwbqagpcs38c66r1arbby76if6pafa4snd6zbp18y71jj8rgvl7"; depends=[limma locfit matrixStats]; };
  XDE = derive2 { name="XDE"; version="2.50.0"; sha256="1f0aahpyrmkg5h3v6v5qw35gsjskh6dh16bgygkssa1qcafmqfv1"; depends=[Biobase BiocGenerics genefilter GeneMeta gtools mvtnorm RColorBrewer siggenes]; };
  XINA = derive2 { name="XINA"; version="1.22.0"; sha256="177yzqmkf3f2xgfrz1zpcw554yzm4njd2chhmvxi2vvijvnrgdf3"; depends=[alluvial ggplot2 gridExtra igraph mclust plyr STRINGdb]; };
  XNAString = derive2 { name="XNAString"; version="1.12.0"; sha256="0dgdaq8w7q32scdxragi40x7mkgpvvyzs2bwfb6c2yb4n2j40imi"; depends=[Biostrings BSgenome data_table formattable future_apply GenomicRanges IRanges pwalign Rcpp S4Vectors stringi stringr]; };
  XVector = derive2 { name="XVector"; version="0.44.0"; sha256="0fxv97m79w0ph4wbgp9drz6ahvnnzpv08grb11lr6a7laqq5x8s2"; depends=[BiocGenerics IRanges S4Vectors zlibbioc]; };
  Xeva = derive2 { name="Xeva"; version="1.20.0"; sha256="1n6bxj5gshr2rzcxw6dc5wcmj1ajssrqzp7a7b6rlnszk2h4vgys"; depends=[BBmisc Biobase ComplexHeatmap doParallel downloader ggplot2 nlme PharmacoGx Rmisc scales]; };
  YAPSA = derive2 { name="YAPSA"; version="1.30.0"; sha256="0908hyji07br1i1zms21a99m3mvi707xj8zbd1w64gzackghabhl"; depends=[Biostrings BSgenome_Hsapiens_UCSC_hg19 circlize ComplexHeatmap corrplot dendextend doParallel dplyr GenomeInfoDb GenomicRanges GetoptLong ggbeeswarm ggplot2 gridExtra gtrellis KEGGREST limSolve magrittr PMCMRplus pracma reshape2 SomaticSignatures VariantAnnotation]; };
  ZygosityPredictor = derive2 { name="ZygosityPredictor"; version="1.4.0"; sha256="03yxnrbkfzc1dqa8zin8gwi9iryw3ir2k5s80dzxclr1651zh5xd"; depends=[DelayedArray dplyr GenomicAlignments GenomicRanges igraph IRanges knitr magrittr purrr readr rlang Rsamtools stringr tibble VariantAnnotation]; };
  a4 = derive2 { name="a4"; version="1.52.0"; sha256="1wzqpvz49wkbvqij48c3l6vqfvflgic8gzvjdigb1c6mr96l6vgg"; depends=[a4Base a4Classif a4Core a4Preproc a4Reporting]; };
  a4Base = derive2 { name="a4Base"; version="1.52.0"; sha256="19vapjmyd3ly3s2gqa2xfg99gyc6n6lv3c6rpi0ch4hzb7wiinvm"; depends=[a4Core a4Preproc annaffy Biobase genefilter glmnet gplots limma mpm multtest]; };
  a4Classif = derive2 { name="a4Classif"; version="1.52.0"; sha256="15jcd66brvbjz0p3z2b43ac5k81s3vmcbkwmga0f7f5v53fp8qvw"; depends=[a4Core a4Preproc Biobase glmnet pamr ROCR varSelRF]; };
  a4Core = derive2 { name="a4Core"; version="1.52.0"; sha256="1jn2ikzijd282jl96i9hcvahkc6l2vsd79dxqiz7kwaqcp7hs5z9"; depends=[Biobase glmnet]; };
  a4Preproc = derive2 { name="a4Preproc"; version="1.52.0"; sha256="1yphs36pk2y4qajq24y443yzb2f55b08nl81ylpf65mvxlxd23w2"; depends=[Biobase BiocGenerics]; };
  a4Reporting = derive2 { name="a4Reporting"; version="1.52.0"; sha256="08zlg74qryqm238mld876v15a6c71brkz2y1gnbj0rnl1l9f9rbh"; depends=[xtable]; };
  aCGH = derive2 { name="aCGH"; version="1.82.0"; sha256="00dcx6kcqq5xcdy7rqgi51cvc20dsgrrki8aicbj1icx0m6601wa"; depends=[Biobase cluster multtest survival]; };
  abseqR = derive2 { name="abseqR"; version="1.22.0"; sha256="0aj3kh4c8zk60n6yyh2jblbrvv77071r96m0mrcslqm71dwg9402"; depends=[BiocParallel BiocStyle circlize flexdashboard ggcorrplot ggdendro ggplot2 gridExtra knitr plotly plyr png RColorBrewer reshape2 rmarkdown stringr vegan VennDiagram]; };
  acde = derive2 { name="acde"; version="1.34.0"; sha256="1h3drjxdmd837hc7l1xk6b4ha39i7bqkb8862h4h6s5rfa7dcc50"; depends=[boot]; };
  adSplit = derive2 { name="adSplit"; version="1.74.0"; sha256="13rrkb0vxkknvqhb8pgx8d13sxzy3w0wbkhhj5lrlc1kb1yqcfbh"; depends=[AnnotationDbi Biobase cluster GO_db KEGGREST multtest]; };
  adductomicsR = derive2 { name="adductomicsR"; version="1.20.0"; sha256="0800jbfm488i6ccz48k49gpxr9sf9104cxcghgy9c4lzm5d3wfbm"; depends=[adductData ade4 AnnotationHub bootstrap data_table doSNOW dplyr DT ExperimentHub fastcluster foreach fpc mzR OrgMassSpecR pastecs pracma RcppEigen reshape2 rvest smoother zoo]; };
  adverSCarial = derive2 { name="adverSCarial"; version="1.2.0"; sha256="1c8anqpxdrkc33pfm1phqjsb8kjdrfqxh93x8n2mpsywqg8q27pb"; depends=[DelayedArray gtools S4Vectors]; };
  affxparser = derive2 { name="affxparser"; version="1.76.0"; sha256="0qqc2sq331g2ml390nhjkrnldp6bi7r6xyz7rw77hnr3qpcrhqk2"; depends=[]; };
  affy = derive2 { name="affy"; version="1.82.0"; sha256="19z22c1yd3rkwk7dp8q8xv16n0qv92iz00vzid3pniy7zr80cxxy"; depends=[affyio Biobase BiocGenerics BiocManager preprocessCore zlibbioc]; };
  affyContam = derive2 { name="affyContam"; version="1.62.0"; sha256="0r4pqda9pv60b867c6yi328687kyxjglk5jmcal6xnlr75nf4w0y"; depends=[affy affydata Biobase]; };
  affyILM = derive2 { name="affyILM"; version="1.56.0"; sha256="185kdrnvcp2jw0k71q0v4yk7583gwgi31h0n281x25hirixf6rm3"; depends=[affxparser affy Biobase gcrma]; };
  affyPLM = derive2 { name="affyPLM"; version="1.80.0"; sha256="1khknl7k45amyw58mcgw7kl511llyddw31qzwqc2l5c4j3bwnpz5"; depends=[affy Biobase BiocGenerics gcrma preprocessCore zlibbioc]; };
  affycomp = derive2 { name="affycomp"; version="1.80.0"; sha256="02n2v1iwkhmilv1bjfza2yrqj7rsr8v46bghajcb8wdyyaj759ib"; depends=[Biobase]; };
  affycoretools = derive2 { name="affycoretools"; version="1.76.0"; sha256="0w138n3f68ndr0innk981vf8p5wb729m31p0d3f9qp08hmv58jfw"; depends=[affy AnnotationDbi Biobase BiocGenerics DBI edgeR gcrma ggplot2 Glimma GOstats gplots hwriter lattice limma oligoClasses ReportingTools RSQLite S4Vectors xtable]; };
  affyio = derive2 { name="affyio"; version="1.74.0"; sha256="156sijj9zy01p038m7yw58h1bw1ii0kd5q9kv3krh6bs67c3dv8h"; depends=[zlibbioc]; };
  affylmGUI = derive2 { name="affylmGUI"; version="1.78.0"; sha256="1qilkr3dcl6driah24kgz7lrzamq08qp2z03inm2m4r5yx8811wc"; depends=[affy affyio affyPLM AnnotationDbi BiocGenerics BiocManager gcrma limma R2HTML tkrplot xtable]; };
  aggregateBioVar = derive2 { name="aggregateBioVar"; version="1.14.0"; sha256="0qag99chj7n7l0wbb8ar0f58xs6883rgddkgj7jnrrlj3acrm12v"; depends=[Matrix rlang S4Vectors SingleCellExperiment SummarizedExperiment tibble]; };
  agilp = derive2 { name="agilp"; version="3.36.0"; sha256="1mfi4xvx6ywkr7b7ma9ip6q2nsjvkri8qx48qyr98yyik7gg28d5"; depends=[]; };
  airpart = derive2 { name="airpart"; version="1.12.0"; sha256="05l5rgjfjln3kip72wj4ll4cgak9yz60xg6dgxxj690pxs1pw7bg"; depends=[apeglm clue ComplexHeatmap dplyr dynamicTreeCut emdbook forestplot ggplot2 lpSolve matrixStats mclust pbapply plyr RColorBrewer rlang S4Vectors scater SingleCellExperiment smurf SummarizedExperiment]; };
  alabaster = derive2 { name="alabaster"; version="1.4.0"; sha256="0c8ryjn4a4py5439vlk23rskf96xc77blj51c6g6m9j812fsby3l"; depends=[alabaster_base alabaster_bumpy alabaster_mae alabaster_matrix alabaster_ranges alabaster_sce alabaster_se alabaster_spatial alabaster_string alabaster_vcf]; };
  alabaster_base = derive2 { name="alabaster.base"; version="1.4.1"; sha256="1id8cs3m1kpcfmk9aa957vy7svf7aam4kzyzic36rxcqmarr130h"; depends=[alabaster_schemas jsonlite jsonvalidate Rcpp rhdf5 Rhdf5lib S4Vectors]; };
  alabaster_bumpy = derive2 { name="alabaster.bumpy"; version="1.4.0"; sha256="16q433asljnnx04b7q2a4ajhbsrzrqa35m6mcx9apg6q24iw869x"; depends=[alabaster_base BiocGenerics BumpyMatrix IRanges Matrix rhdf5 S4Vectors]; };
  alabaster_files = derive2 { name="alabaster.files"; version="1.2.0"; sha256="0mib4wix9ddgvhgff05gq2ijy6kyh884nv0j40rxzfkxqhp77gim"; depends=[alabaster_base BiocGenerics Rsamtools S4Vectors]; };
  alabaster_mae = derive2 { name="alabaster.mae"; version="1.4.0"; sha256="07w4q6dm4asrcdqynhdlxyaaf29s3ca8ij8iblwjnpgp9p5pbj6v"; depends=[alabaster_base alabaster_se jsonlite MultiAssayExperiment rhdf5 S4Vectors]; };
  alabaster_matrix = derive2 { name="alabaster.matrix"; version="1.4.0"; sha256="00k0lylyhz6glqhd463bbmmldqhv5i7an9nw95md7x2m43c9gzyk"; depends=[alabaster_base BiocGenerics DelayedArray HDF5Array Matrix Rcpp rhdf5 S4Arrays S4Vectors SparseArray]; };
  alabaster_ranges = derive2 { name="alabaster.ranges"; version="1.4.1"; sha256="0d3ygcn2sxkrdyjlwl98l50b0vqxrsp24vb029z5g8kjbvqhh5kr"; depends=[alabaster_base BiocGenerics GenomeInfoDb GenomicRanges IRanges rhdf5 S4Vectors]; };
  alabaster_sce = derive2 { name="alabaster.sce"; version="1.4.0"; sha256="1i9nmivsfrd7fbb8njmwihfx4xpj4p3h5bnlj9fvk5308bbj3qcg"; depends=[alabaster_base alabaster_se jsonlite SingleCellExperiment]; };
  alabaster_schemas = derive2 { name="alabaster.schemas"; version="1.4.0"; sha256="1cizlslxw0nhrfjsz3x90waa9w4n2v72a0cycbzvxqbbvkh3cp1l"; depends=[]; };
  alabaster_se = derive2 { name="alabaster.se"; version="1.4.1"; sha256="134r4pwaa4nsmdgqxs16w3adn482zl70lgyd4s96pmx7hqm9i1vx"; depends=[alabaster_base alabaster_matrix alabaster_ranges BiocGenerics GenomicRanges IRanges jsonlite S4Vectors SummarizedExperiment]; };
  alabaster_spatial = derive2 { name="alabaster.spatial"; version="1.4.0"; sha256="11mgs6smyiv4r5cajzqpw0k7q0jsm6xch1b5c9w7scl7d9bq981k"; depends=[alabaster_base alabaster_sce rhdf5 S4Vectors SpatialExperiment]; };
  alabaster_string = derive2 { name="alabaster.string"; version="1.4.0"; sha256="0p55dpfwjjikmgyq0vk9hmd6k0j3d2x4jjxd7wnabhga3vr4jg7q"; depends=[alabaster_base Biostrings S4Vectors]; };
  alabaster_vcf = derive2 { name="alabaster.vcf"; version="1.4.0"; sha256="1ry5gim6kkis8wy0v1afv44ay6nw8m9nd6jl89980z499pblf9j4"; depends=[alabaster_base alabaster_se alabaster_string Rsamtools S4Vectors VariantAnnotation]; };
  alevinQC = derive2 { name="alevinQC"; version="1.20.0"; sha256="1pq42lvgggysg28ngxipqb1l7jfj498nxpg40h02siz6nb6inbdw"; depends=[cowplot dplyr DT GGally ggplot2 Rcpp rjson rlang rmarkdown shiny shinydashboard tximport]; };
  altcdfenvs = derive2 { name="altcdfenvs"; version="2.66.0"; sha256="08k3j3dc93vg5c9ccw7mc4fri9xbdj7rdjyj0h6ig0s5866fqvlb"; depends=[affy Biobase BiocGenerics Biostrings hypergraph makecdfenv S4Vectors]; };
  amplican = derive2 { name="amplican"; version="1.26.0"; sha256="1nbyivd5020kqkmk5ngpaixhdxgmqpifaxnfgq6yc2njqizgbhxy"; depends=[BiocGenerics BiocParallel Biostrings cluster data_table dplyr GenomeInfoDb GenomicRanges ggplot2 ggthemes gridExtra gtable IRanges knitr Matrix matrixStats pwalign Rcpp rmarkdown S4Vectors ShortRead stringr waffle]; };
  animalcules = derive2 { name="animalcules"; version="1.20.0"; sha256="1g073n8nmckd388hy9gfiddil53wv692k69ywjc85jyp5jy2n265"; depends=[ape assertthat caret covr DESeq2 dplyr DT forcats ggforce ggplot2 GUniFrac lattice limma magrittr Matrix MultiAssayExperiment plotly rentrez reshape2 ROCit S4Vectors scales shiny shinyjs SummarizedExperiment tibble tidyr tsne umap vegan XML]; };
  annaffy = derive2 { name="annaffy"; version="1.76.0"; sha256="1298mn8yz4i0qqw1i8pd4ym5f65dmyb8wcmpyahzz11na4diybmj"; depends=[AnnotationDbi Biobase BiocManager DBI GO_db]; };
  annmap = derive2 { name="annmap"; version="1.46.0"; sha256="1xijcm0c19wj2yknrlsz2ifm097z32rc58k608482686srj0bg2i"; depends=[Biobase BiocGenerics DBI digest genefilter GenomicRanges IRanges lattice RMySQL Rsamtools]; };
  annotate = derive2 { name="annotate"; version="1.82.0"; sha256="1v4sq22lwrhl50whag0jil788wwvi4rpdaij03iwak93q998ls0f"; depends=[AnnotationDbi Biobase BiocGenerics DBI httr XML xtable]; };
  annotationTools = derive2 { name="annotationTools"; version="1.78.0"; sha256="1hwawrp0pbrm9xf7fn65nj0q4s49qlnmxfjlmrv5fykyn3i1lhpq"; depends=[Biobase]; };
  annotatr = derive2 { name="annotatr"; version="1.30.0"; sha256="11cc3nknbckm0v5r7dzgqzw0137w4c08ab10s9svb1y02z45a0qz"; depends=[AnnotationDbi AnnotationHub dplyr GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 IRanges readr regioneR reshape2 rtracklayer S4Vectors]; };
  anota = derive2 { name="anota"; version="1.52.0"; sha256="1pg9p6982901k08iqpk0cdb9hii3k7bci9gq6an711r8a4iy3lmc"; depends=[multtest qvalue]; };
  anota2seq = derive2 { name="anota2seq"; version="1.26.0"; sha256="140k37wswl4w2136pz9y0z82sphzxmgzgk3cr400kkm39wjn7vxm"; depends=[DESeq2 edgeR limma multtest qvalue RColorBrewer SummarizedExperiment]; };
  antiProfiles = derive2 { name="antiProfiles"; version="1.44.0"; sha256="0p2fhxzgn877mic2yv1sgcidgm74z8hxa3hdaawgvhhvi2j6v8wa"; depends=[locfit matrixStats]; };
  apComplex = derive2 { name="apComplex"; version="2.70.0"; sha256="1fsqrds5r8bhdf7fbnw6rf3vqapl6xk1a5l6jjb98raxmjsrfyqs"; depends=[graph org_Sc_sgd_db RBGL Rgraphviz]; };
  apeglm = derive2 { name="apeglm"; version="1.26.1"; sha256="039my876v0k2mr50w90w3phj4cq55awf5ks07kr2fnm7w211gxvs"; depends=[emdbook GenomicRanges Rcpp RcppEigen RcppNumerical SummarizedExperiment]; };
  appreci8R = derive2 { name="appreci8R"; version="1.22.0"; sha256="1nwb7475lhclyd0jdwm0sp1wh2rgs2h16k4hin6z44axix5v7jhr"; depends=[Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 COSMIC_67 DT GenomicFeatures GenomicRanges GenomicScores Homo_sapiens IRanges MafDb_1Kgenomes_phase3_hs37d5 MafDb_ExAC_r1_0_hs37d5 MafDb_gnomADex_r2_1_hs37d5 openxlsx PolyPhen_Hsapiens_dbSNP131 rentrez Rsamtools S4Vectors seqinr shiny shinyjs SIFT_Hsapiens_dbSNP137 SNPlocs_Hsapiens_dbSNP144_GRCh37 stringr SummarizedExperiment TxDb_Hsapiens_UCSC_hg19_knownGene VariantAnnotation XtraSNPlocs_Hsapiens_dbSNP144_GRCh37]; };
  aroma_light = derive2 { name="aroma.light"; version="3.34.0"; sha256="1v24b43knsjpw44zkrzv8pvxjiw12rcz9wqp4ahd88dg23j7pvwz"; depends=[matrixStats R_methodsS3 R_oo R_utils]; };
  arrayMvout = derive2 { name="arrayMvout"; version="1.62.0"; sha256="11v3s972nyahdswqdcab0fj9jb73vd5dnd5kfb09572y4z0hn5xw"; depends=[affy affyContam Biobase lumi mdqc parody]; };
  arrayQuality = derive2 { name="arrayQuality"; version="1.82.0"; sha256="0wmczy2wdxki9pam9q6ly5clvqbl018v1ar4zkdm8algjddyc2cp"; depends=[gridBase hexbin limma marray RColorBrewer]; };
  arrayQualityMetrics = derive2 { name="arrayQualityMetrics"; version="3.60.0"; sha256="04y1vbpxqhqn1vsyqmscikaxn6wshsk4krcqzf2baf9x4azbdjk1"; depends=[affy affyPLM beadarray Biobase genefilter gridSVG Hmisc hwriter lattice latticeExtra limma RColorBrewer setRNG svglite vsn XML]; };
  artMS = derive2 { name="artMS"; version="1.22.0"; sha256="11a6igby8kz2r5wawrsisz22v4hak9004zr8y87v3pp92rnvb3ma"; depends=[AnnotationDbi bit64 circlize cluster corrplot data_table dplyr getopt ggdendro ggplot2 ggrepel gplots limma MSstats openxlsx org_Hs_eg_db pheatmap plotly plyr RColorBrewer scales seqinr stringr tidyr UpSetR VennDiagram yaml]; };
  atSNP = derive2 { name="atSNP"; version="1.20.0"; sha256="08pcbys8iy8wzqzzvlnwc3qw7m7cswkqa3x2x2x8m4ni1s4isd6z"; depends=[BiocFileCache BiocParallel BSgenome data_table ggplot2 lifecycle motifStack rappdirs Rcpp testthat]; };
  atena = derive2 { name="atena"; version="1.10.0"; sha256="1y2v8mi9awgfbcawpcir01qglxn0bdgj6v2dsdqp6if25cizl3sr"; depends=[AnnotationHub BiocGenerics BiocParallel cli GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges Matrix MatrixGenerics matrixStats Rsamtools S4Vectors sparseMatrixStats SQUAREM SummarizedExperiment]; };
  attract = derive2 { name="attract"; version="1.56.0"; sha256="08l634sk6y06y2m78vsd0ld4w3h6qvx4hk6wkqflkl9jjyqpx8jy"; depends=[AnnotationDbi Biobase cluster GOstats KEGGREST limma org_Hs_eg_db reactome_db]; };
  autonomics = derive2 { name="autonomics"; version="1.12.1"; sha256="1fzzj0v6v4jvr3wh5bnjr6h2ny8zfm9pdlbhq5syaa2plvsbblpy"; depends=[abind BiocFileCache BiocGenerics bit64 codingMatrices colorspace data_table dplyr edgeR ggforce ggplot2 ggrepel gridExtra limma magrittr matrixStats MultiAssayExperiment R_utils RColorBrewer readxl rlang S4Vectors scales stringi SummarizedExperiment tidyr tidyselect vsn]; };
  awst = derive2 { name="awst"; version="1.12.0"; sha256="1iaakdjxrz4szl4lnjcszy47q5dsh2d7i3wrr3wwdhw6wjcd62hj"; depends=[SummarizedExperiment]; };
  bacon = derive2 { name="bacon"; version="1.32.0"; sha256="09lvjb0fa70kcl7mkp4agxv6jcm2ncmnrffav6zmz038imhmvdgm"; depends=[BiocParallel ellipse ggplot2]; };
  ballgown = derive2 { name="ballgown"; version="2.36.0"; sha256="0x3avbqf0ipmb70szf2chhbdg14ba2hwhyyz0wd66c1qwfk6aj9v"; depends=[Biobase GenomeInfoDb GenomicRanges IRanges limma RColorBrewer rtracklayer S4Vectors sva]; };
  bambu = derive2 { name="bambu"; version="3.6.0"; sha256="1pn6a74nvcpn0xzfb8167hbc6pdma0ybhh7kjpqdl4hgjp446w5w"; depends=[BiocGenerics BiocParallel BSgenome data_table dplyr GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges Rcpp RcppArmadillo Rsamtools S4Vectors SummarizedExperiment tidyr xgboost]; };
  bamsignals = derive2 { name="bamsignals"; version="1.36.0"; sha256="1jq993m6b0cv3ibgjrbzyka7svb653hvi6bvqhf8ir3lgjgs23dp"; depends=[BiocGenerics GenomicRanges IRanges Rcpp Rhtslib zlibbioc]; };
  bandle = derive2 { name="bandle"; version="1.8.0"; sha256="0lkmwr207s26kxmhfcsay4mb3fg70wjcrhhjj82g5yjrycmjidm9"; depends=[BH Biobase BiocParallel BiocStyle circlize dplyr ggalluvial ggplot2 ggrepel knitr lbfgs MSnbase plyr pRoloc pRolocdata Rcpp RcppArmadillo rlang robustbase S4Vectors tidyr]; };
  banocc = derive2 { name="banocc"; version="1.28.0"; sha256="12fysw9m3rrmyfq1j97rdklaln6vgjdmz7hj85vrh10haz9j23s2"; depends=[coda mvtnorm rstan stringr]; };
  barcodetrackR = derive2 { name="barcodetrackR"; version="1.12.0"; sha256="0x0fpa44lyww2l1rdc35pdlgczz4y1vxjbn0s1frlpaacmqcxrly"; depends=[circlize cowplot dplyr ggdendro ggplot2 ggridges magrittr plyr proxy RColorBrewer rlang S4Vectors scales shiny SummarizedExperiment tibble tidyr vegan viridis]; };
  basecallQC = derive2 { name="basecallQC"; version="1.28.0"; sha256="033agi9xcyr2mpryyqjzd1diinv3cnam6f13qw4xfg0fncn0rm83"; depends=[data_table dplyr DT ggplot2 knitr lazyeval magrittr prettydoc raster rmarkdown ShortRead stringr tidyr XML yaml]; };
  basilisk = derive2 { name="basilisk"; version="1.16.0"; sha256="1jhaar524z4ly8d4c7nyjn094m4sgz4vhh8qljd2yvs30xxs0jin"; depends=[basilisk_utils dir_expiry reticulate]; };
  basilisk_utils = derive2 { name="basilisk.utils"; version="1.16.0"; sha256="04amc13h4ghy1zr9wkdl42wgicxz5s2iwsspxvvi18acm06nzgfh"; depends=[dir_expiry]; };
  batchelor = derive2 { name="batchelor"; version="1.20.0"; sha256="1h70rm0h711ndj9kz3q10yd9f6npjiwvk9wmkg6w3pdgjni1nrl0"; depends=[beachmat BiocGenerics BiocNeighbors BiocParallel BiocSingular DelayedArray DelayedMatrixStats igraph Matrix Rcpp ResidualMatrix S4Vectors ScaledMatrix scuttle SingleCellExperiment SummarizedExperiment]; };
  bayNorm = derive2 { name="bayNorm"; version="1.22.0"; sha256="0b05446vcqxr7smxyhmvl6rxlckzzgqhf5v1059657kihhscqr7s"; depends=[BB BiocParallel doSNOW fitdistrplus foreach iterators locfit MASS Matrix Rcpp RcppArmadillo RcppProgress SingleCellExperiment SummarizedExperiment]; };
  baySeq = derive2 { name="baySeq"; version="2.38.0"; sha256="0nlkynzijxl6f8983vdpmcssvrpjf6s42zx3lxfwxwlhrvz1yg9l"; depends=[abind edgeR GenomicRanges]; };
  bcSeq = derive2 { name="bcSeq"; version="1.26.0"; sha256="0bbr46clvr1nlqk7lkdyvz5y0yfvw1rxsm29gsanfqbxa3akvxn6"; depends=[Biostrings Matrix Rcpp]; };
  beachmat = derive2 { name="beachmat"; version="2.20.0"; sha256="0gvxz9w2mi8scqyyhhnrasscs7hwvxxlqvh7j9m6akpi8qq91v6y"; depends=[BiocGenerics DelayedArray Matrix Rcpp SparseArray]; };
  beachmat_hdf5 = derive2 { name="beachmat.hdf5"; version="1.2.0"; sha256="1qjib3vw0b0nvfx3j5nfgwikcmc5jq49ddahv05arhdabd40vmg4"; depends=[beachmat DelayedArray HDF5Array Rcpp Rhdf5lib]; };
  beadarray = derive2 { name="beadarray"; version="2.54.0"; sha256="0yda6maj985k374bh6zkrs8qffw1jrz9gc3mja07ibyn4pvzkclq"; depends=[AnnotationDbi BeadDataPackR Biobase BiocGenerics GenomicRanges ggplot2 hexbin illuminaio IRanges limma reshape2]; };
  beer = derive2 { name="beer"; version="1.8.0"; sha256="1b7pw7nwpryrdji14y9cbv03f8g8r8lzf1fd72ff2b69csp993ww"; depends=[BiocParallel cli edgeR PhIPData progressr rjags SummarizedExperiment]; };
  benchdamic = derive2 { name="benchdamic"; version="1.10.0"; sha256="040lkmwz51za2biqlf3z3ai5j03rmw15kwz3i3v10rzq0322fsk3"; depends=[ALDEx2 ANCOMBC BiocParallel corncob cowplot dearseq DESeq2 edgeR ggdendro ggplot2 ggridges GUniFrac limma lme4 Maaslin2 MAST metagenomeSeq MGLM MicrobiomeStat mixOmics NOISeq phyloseq plyr RColorBrewer reshape2 Seurat SummarizedExperiment tidytext TreeSummarizedExperiment zinbwave]; };
  betaHMM = derive2 { name="betaHMM"; version="1.0.0"; sha256="1dwdjfvca22gaz0qjngf3fc32bpybz1dvvbwd91wgznzk7wjk6yq"; depends=[cowplot doParallel dplyr foreach GenomicRanges ggplot2 pROC S4Vectors scales stringr SummarizedExperiment tidyr tidyselect]; };
  bettr = derive2 { name="bettr"; version="1.0.0"; sha256="19z7df9kmk4zfbljlq5ginl82zml37iyjnjm0fqinm2b9i1ww432"; depends=[bslib circlize ComplexHeatmap cowplot dplyr DT ggplot2 Hmisc rlang S4Vectors scales shiny shinyjqui sortable SummarizedExperiment tibble tidyr]; };
  bgx = derive2 { name="bgx"; version="1.70.0"; sha256="0sglk8q12fvqk6m699v3lajwr1zb8wnrldfv2n8y7jjy2fqcvs19"; depends=[affy Biobase gcrma Rcpp]; };
  bigmelon = derive2 { name="bigmelon"; version="1.30.0"; sha256="0fa1dwbk6hdiwg6dmbks7hy4cg3ydyd2sv94cyl0003awhf00nn9"; depends=[Biobase BiocGenerics gdsfmt GEOquery illuminaio methylumi minfi wateRmelon]; };
  bioCancer = derive2 { name="bioCancer"; version="1.32.0"; sha256="0mwmdavakmrfa7d7h0h14lkk6k7ps3g8hvbja1hq01nkdfy7imvp"; depends=[AlgDesign AnnotationDbi Biobase cBioPortalData clusterProfiler DiagrammeR DOSE dplyr DT geNetClassifier GO_db htmlwidgets org_Bt_eg_db org_Hs_eg_db plyr r_import R_methodsS3 R_oo radiant_data reactome_db ReactomePA shiny shinythemes tibble tidyr visNetwork XML]; };
  bioDist = derive2 { name="bioDist"; version="1.76.0"; sha256="1yxr5df1y8v5c9imh27j86s7g9wjvi51j2wyn8jgma875mad41hq"; depends=[Biobase KernSmooth]; };
  bioassayR = derive2 { name="bioassayR"; version="1.42.0"; sha256="0rckhgg73cgz0ppqaywc7nvbnp1is6cyjfa7dn2l32xxrcl57pq6"; depends=[BiocGenerics ChemmineR DBI Matrix rjson RSQLite XML]; };
  biobroom = derive2 { name="biobroom"; version="1.36.0"; sha256="0flj14d8aamr1fzcpd0k7jq5rs0j5dsijpahg066qrnapn5990d0"; depends=[Biobase broom dplyr tidyr]; };
  biobtreeR = derive2 { name="biobtreeR"; version="1.16.0"; sha256="0660rc8b4vkic4dbf64wkky68f0hk92ip52x7gihvv203cj9fin4"; depends=[httpuv httr jsonlite stringi]; };
  biocGraph = derive2 { name="biocGraph"; version="1.66.0"; sha256="0ji6pa8wfj57drpnp03vgas1pird84g15nnp6469jmx773izhfq0"; depends=[BiocGenerics geneplotter graph Rgraphviz]; };
  biocViews = derive2 { name="biocViews"; version="1.72.0"; sha256="10j9s50ppfx8r752wkabls0n4gxp17z7dnaf352f3dcdbfa8ijh5"; depends=[Biobase BiocManager graph RBGL RCurl RUnit XML]; };
  biocroxytest = derive2 { name="biocroxytest"; version="1.0.0"; sha256="0na0qbrqjfyq6wlxfnp6h6ljdmcxs5nq4spbifk6v74cxm7aqgni"; depends=[cli glue roxygen2 stringr]; };
  biocthis = derive2 { name="biocthis"; version="1.14.0"; sha256="1f09vw5qjxyirz5xbvnnjlwxg7z0i0y8yry49d1gyx0spyhzl7sp"; depends=[BiocManager fs glue rlang styler usethis]; };
  biodb = derive2 { name="biodb"; version="1.12.0"; sha256="0zkd6505q0myc5l9d69i1fvfhcrjqxkv208p84zr5p7xi8jmg3dw"; depends=[BiocFileCache chk git2r jsonlite lgr lifecycle openssl plyr progress R6 rappdirs Rcpp RCurl RSQLite stringr testthat withr XML yaml]; };
  biodbChebi = derive2 { name="biodbChebi"; version="1.10.0"; sha256="1w3mnryv1x5a68llnpqfdsrkzwrwq2b7n6hm458gfkw6ql070109"; depends=[biodb R6]; };
  biodbExpasy = derive2 { name="biodbExpasy"; version="1.8.0"; sha256="1amzff4ndadialm5rhzy267c24h5fmh9w9w109zsbw8sixl0s0sd"; depends=[biodb chk R6 stringr]; };
  biodbHmdb = derive2 { name="biodbHmdb"; version="1.10.0"; sha256="0xf63zj1bpkaymv3psvrkibjbirqb7bych95p4l5crsg8af730ra"; depends=[biodb R6 Rcpp testthat zip]; };
  biodbKegg = derive2 { name="biodbKegg"; version="1.10.0"; sha256="065a0c62xbbqc73gbcqcwfv1jyyy025dppjq93l0ic4qshh9kg79"; depends=[biodb chk lifecycle R6]; };
  biodbLipidmaps = derive2 { name="biodbLipidmaps"; version="1.10.0"; sha256="1p181kwy9q8jj4m7flg71pqn7h6865hbwha4n6j2qki830vym6rv"; depends=[biodb lifecycle R6]; };
  biodbNcbi = derive2 { name="biodbNcbi"; version="1.8.0"; sha256="01v0lym2kldcjypqsx9b8k8hvxdmnr1rsczdzl87nsax22q6g9hc"; depends=[biodb chk R6 XML]; };
  biodbNci = derive2 { name="biodbNci"; version="1.8.0"; sha256="11xzf804v9dp25zw7kxwws2q386h22ybibrcplm3wrkrxj223kks"; depends=[biodb chk R6 Rcpp testthat]; };
  biodbUniprot = derive2 { name="biodbUniprot"; version="1.10.0"; sha256="1jwv6y9kaq2d7iswgz602yhwg35c9d9yqa9c87d454n0wrl6h6yg"; depends=[biodb R6]; };
  biomaRt = derive2 { name="biomaRt"; version="2.60.0"; sha256="0vsjldksykgs6z7afn8kbqzl489irvvzrzq75kqkhavyhxnavqkq"; depends=[AnnotationDbi BiocFileCache digest httr2 progress rappdirs stringr xml2]; };
  biomformat = derive2 { name="biomformat"; version="1.32.0"; sha256="0jys0nmp833ax96vfdh1adikpyapr5gkmldx5kvv5bqiqc8aipzb"; depends=[jsonlite Matrix plyr rhdf5]; };
  biomvRCNS = derive2 { name="biomvRCNS"; version="1.44.0"; sha256="1wk0qagx9s2lxykc1fp7l35kl6q17lqy6x4fl2c57v3wa11f47mi"; depends=[GenomicRanges Gviz IRanges mvtnorm]; };
  biosigner = derive2 { name="biosigner"; version="1.32.0"; sha256="1c56s8lr5cdx27v0rdi4l4h680x6ga9wazf4dj1xkqyliqz65ps5"; depends=[Biobase e1071 MultiAssayExperiment MultiDataSet randomForest ropls SummarizedExperiment]; };
  biotmle = derive2 { name="biotmle"; version="1.28.0"; sha256="06kixhzkrzxyic44kdmqrv19v2c4a7sri8cbhbvww8km4n5l39sf"; depends=[assertthat BiocGenerics BiocParallel dplyr drtmle ggplot2 ggsci limma S4Vectors SummarizedExperiment superheat tibble]; };
  biovizBase = derive2 { name="biovizBase"; version="1.52.0"; sha256="1jbcnjjwdjy7zfy0ybgfy1y5ym7rygzkailr5bm4hnh9bn2837p7"; depends=[AnnotationDbi AnnotationFilter BiocGenerics Biostrings dichromat ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges Hmisc IRanges RColorBrewer rlang Rsamtools S4Vectors scales SummarizedExperiment VariantAnnotation]; };
  biscuiteer = derive2 { name="biscuiteer"; version="1.18.0"; sha256="15bisrcgyiv9ndfvgm0p4igyr4jwsf68ccis1nf1hi9x291k7m6y"; depends=[Biobase BiocGenerics BiocParallel biscuiteerData bsseq data_table DelayedMatrixStats dmrseq GenomeInfoDb GenomicRanges gtools HDF5Array Homo_sapiens impute IRanges Matrix matrixStats Mus_musculus QDNAseq qualV R_utils readr Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation]; };
  blacksheepr = derive2 { name="blacksheepr"; version="1.18.0"; sha256="1avqq6m30x2bg3h32laxcpbd4f5s10548k3cj4xb1d25svnn8pax"; depends=[circlize ComplexHeatmap pasilla RColorBrewer SummarizedExperiment viridis]; };
  blima = derive2 { name="blima"; version="1.38.0"; sha256="1a5rzwgsvkwzl97p6pvbhi8dsvd7vbny0bajjp273czrm09yk8rc"; depends=[beadarray Biobase BiocGenerics Rcpp]; };
  bluster = derive2 { name="bluster"; version="1.14.0"; sha256="1bj7wx2dnwbrv2gxcmqmq815vawfiqj2xy3624fjli11r8c1hywa"; depends=[BiocNeighbors BiocParallel cluster igraph Matrix Rcpp S4Vectors]; };
  bnbc = derive2 { name="bnbc"; version="1.26.0"; sha256="09vy9igcnw927j0zb4znrbcknkaic69ly6w4syb1cwysr0rvmrdz"; depends=[BiocGenerics data_table EBImage GenomeInfoDb GenomicRanges HiCBricks IRanges matrixStats preprocessCore Rcpp rhdf5 S4Vectors SummarizedExperiment sva]; };
  bnem = derive2 { name="bnem"; version="1.12.0"; sha256="15jzsba3qdkj5y7gqxklgv69r5bq2li4irvjkhmbjnjlv0pv4wdg"; depends=[affy binom Biobase CellNOptR cluster epiNEM flexclust graph limma matrixStats mnem RColorBrewer Rgraphviz rmarkdown snowfall sva vsn]; };
  borealis = derive2 { name="borealis"; version="1.8.0"; sha256="1m7yq1sx4ivbcrjm1w3l5qsyhlv0jdkb5l91kxd5hvisakfdrfz9"; depends=[Biobase bsseq cowplot doParallel dplyr DSS foreach gamlss gamlss_dist GenomicRanges ggplot2 plyr purrr R_utils rlang snow]; };
  branchpointer = derive2 { name="branchpointer"; version="1.30.0"; sha256="034sa73ll152s24cgrz47br7kyswr7jn6c735mp6dvbhppmlj2xm"; depends=[biomaRt Biostrings BSgenome_Hsapiens_UCSC_hg38 caret cowplot data_table gbm GenomeInfoDb GenomicRanges ggplot2 IRanges kernlab plyr rtracklayer S4Vectors stringr]; };
  breakpointR = derive2 { name="breakpointR"; version="1.22.0"; sha256="0imbsqrslclvfyvc00sv6ngvl5hqlr6ian07v521m63ffpx6ll78"; depends=[BiocGenerics breakpointRdata cowplot doParallel foreach GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gtools IRanges Rsamtools S4Vectors]; };
  brendaDb = derive2 { name="brendaDb"; version="1.18.0"; sha256="1rhmd3v20y2cw70zpzykpz7bidf000dq904c2qlf58nqwclxj88l"; depends=[BiocFileCache BiocParallel crayon dplyr magrittr purrr rappdirs Rcpp rlang stringr tibble tidyr]; };
  bsseq = derive2 { name="bsseq"; version="1.40.0"; sha256="1b7a9ryl4lz6qy2pni3k9bk6hdf147s3m7fx0icg6fkgi0ymssyx"; depends=[beachmat Biobase BiocGenerics BiocParallel Biostrings BSgenome data_table DelayedArray DelayedMatrixStats GenomeInfoDb GenomicRanges gtools HDF5Array IRanges limma locfit permute R_utils Rcpp rhdf5 S4Vectors scales SummarizedExperiment]; };
  bugsigdbr = derive2 { name="bugsigdbr"; version="1.10.0"; sha256="0fg7rk14jgpr07wm93i40wklxphag9yw56kr59rw1cfdfhqnmsv7"; depends=[BiocFileCache vroom]; };
  bumphunter = derive2 { name="bumphunter"; version="1.46.0"; sha256="08b5d0grmpk5pryffdh6gdafhp1brana353q2kmwhz7x55aq3w68"; depends=[AnnotationDbi BiocGenerics doRNG foreach GenomeInfoDb GenomicFeatures GenomicRanges IRanges iterators limma locfit matrixStats S4Vectors]; };
  cBioPortalData = derive2 { name="cBioPortalData"; version="2.16.0"; sha256="0s1qy46z78hlk37lnvqh1zi36y90299f6ym82k2d60jbw8aw2jxa"; depends=[AnVIL BiocFileCache digest dplyr GenomeInfoDb GenomicRanges httr IRanges MultiAssayExperiment RaggedExperiment readr RTCGAToolbox S4Vectors SummarizedExperiment TCGAutils tibble tidyr]; };
  cTRAP = derive2 { name="cTRAP"; version="1.22.0"; sha256="119hnbv0p3mgr3zh9dff9pwllnsk790hm0ahypzpr08gwg2ml9lb"; depends=[AnnotationDbi AnnotationHub binr cowplot data_table dplyr DT fastmatch fgsea ggplot2 ggrepel highcharter htmltools httr limma pbapply purrr qs R_utils readxl reshape2 rhdf5 rlang scales shiny shinycssloaders tibble]; };
  cageminer = derive2 { name="cageminer"; version="1.10.0"; sha256="0ijagv7yzlil4mdibip5css7asdrnzfr2lq3r9zq8fkf4fwr2mpx"; depends=[BioNERO GenomeInfoDb GenomicRanges ggbio ggplot2 ggtext IRanges reshape2 rlang]; };
  calm = derive2 { name="calm"; version="1.18.0"; sha256="0sbl44747xc7m4jpf318gb7cb1hx6r2mw4bk81da7d5d8kpi9n9s"; depends=[mgcv]; };
  canceR = derive2 { name="canceR"; version="1.38.0"; sha256="1hmc4sw3w5wsix7ixr85lplpp6hxrd5xpf5apvr77hligw61dhvs"; depends=[Biobase cBioPortalData circlize dplyr Formula geNetClassifier GSEABase phenoTest plyr R_methodsS3 R_oo rpart RUnit survival tidyr tkrplot]; };
  cancerclass = derive2 { name="cancerclass"; version="1.48.0"; sha256="00lin7likd0ffqk2nqx5ql8v3zpr82xprv36c1gzw0wkrgp3rgmw"; depends=[binom Biobase]; };
  cardelino = derive2 { name="cardelino"; version="1.6.0"; sha256="16mczwh41gf7ikbzxvggai7a8d64fn2k7q9w1yxf0sn6cwg3l0di"; depends=[combinat GenomeInfoDb GenomicRanges ggplot2 ggtree Matrix matrixStats pheatmap S4Vectors snpStats VariantAnnotation vcfR]; };
  casper = derive2 { name="casper"; version="2.38.0"; sha256="0bwjnncm93j99m38mv99i1pw42cjmib4sqzw5nhb6p9mj39mm3zb"; depends=[Biobase BiocGenerics coda EBarrays gaga GenomeInfoDb GenomicFeatures GenomicRanges gtools IRanges limma mgcv Rsamtools rtracklayer S4Vectors sqldf survival VGAM]; };
  categoryCompare = derive2 { name="categoryCompare"; version="1.48.0"; sha256="0mfmv3wna7dddf4i3ckh2iin8vq05g4fjb1n2pvw0s9lz3da3rjf"; depends=[annotate AnnotationDbi Biobase BiocGenerics Category colorspace GOstats graph GSEABase hwriter RCy3]; };
  cbaf = derive2 { name="cbaf"; version="1.26.3"; sha256="1lpz3n288v32nbb0g4jb1mxmx79amm29m40w3sfkgllnjjdwsyd3"; depends=[BiocFileCache cBioPortalData genefilter gplots openxlsx RColorBrewer]; };
  cbpManager = derive2 { name="cbpManager"; version="1.12.0"; sha256="1idlxmnbyvc1nzshnvf3p4y9xdjb2kdcm05kpf3ihh993igddk14"; depends=[basilisk dplyr DT htmltools jsonlite magrittr markdown plyr rapportools reticulate rintrojs rlang shiny shinyBS shinycssloaders shinydashboard vroom]; };
  ccImpute = derive2 { name="ccImpute"; version="1.6.0"; sha256="0pjdlh77wpv54m2kc26kyzmpqikgz666dkw5h6af7q7lmgp0xc19"; depends=[BiocParallel matrixStats Rcpp RcppEigen SIMLR]; };
  ccfindR = derive2 { name="ccfindR"; version="1.24.0"; sha256="1n9dncj7d3ijk6h6fkgmh3a0c6xrfll2fifkl2bz26ndq9i4m1q9"; depends=[ape gtools irlba Matrix RColorBrewer Rcpp RcppEigen Rdpack Rmpi Rtsne S4Vectors SingleCellExperiment SummarizedExperiment]; };
  ccmap = derive2 { name="ccmap"; version="1.30.0"; sha256="16n0z3rvwaqzqgv59v73i29f66ywsabargywxwh6acv0xgnrn6w6"; depends=[AnnotationDbi BiocManager ccdata data_table doParallel foreach lsa xgboost]; };
  ccrepe = derive2 { name="ccrepe"; version="1.40.0"; sha256="1232pfjv5qd776zckhyxnj1i36raad37z9xwap9m3chqh673a7wl"; depends=[infotheo]; };
  ceRNAnetsim = derive2 { name="ceRNAnetsim"; version="1.16.0"; sha256="1zpdh9hdx3iayyrzvn67ids374pc891blag58gb28dv2xpzfqn9m"; depends=[dplyr furrr future ggplot2 ggraph igraph purrr rlang tibble tidygraph tidyr]; };
  celaref = derive2 { name="celaref"; version="1.22.0"; sha256="1l2bf3fhapvpaq30qdrc6nd1chfa4yjish9w9cq7lbhl3xm9b82z"; depends=[BiocGenerics DelayedArray dplyr ggplot2 magrittr MAST Matrix readr rlang S4Vectors SummarizedExperiment tibble]; };
  celda = derive2 { name="celda"; version="1.20.0"; sha256="0d2vmjgcz5d4nimi3rxk7smbl2ywrgayasjna7kaqvf726ab71qr"; depends=[circlize ComplexHeatmap data_table dbscan DelayedArray digest doParallel enrichR foreach ggplot2 ggrepel gridExtra gtable Matrix matrixStats MCMCprecision plyr RColorBrewer Rcpp RcppEigen reshape2 Rtsne S4Vectors scales scater scran SingleCellExperiment stringr SummarizedExperiment uwot withr]; };
  cellHTS2 = derive2 { name="cellHTS2"; version="2.68.0"; sha256="0iqsxs84dcr4d1y5pg4799vv3jpf5i1hhq4fhgdp05lanx5qqpsz"; depends=[Biobase BiocGenerics Category genefilter GSEABase hwriter locfit RColorBrewer splots vsn]; };
  cellbaseR = derive2 { name="cellbaseR"; version="1.28.0"; sha256="1g2y7pgpc500vls62xp817n9arsw8dbj3c0d9dbvb1d014gzmbdw"; depends=[BiocParallel data_table doParallel foreach httr jsonlite pbapply R_utils Rsamtools tidyr]; };
  cellity = derive2 { name="cellity"; version="1.32.0"; sha256="0m79q1c2rvv24q593c5vwsh0dsi2ahfwvf9a5pf9r9wnk3am9r3n"; depends=[AnnotationDbi e1071 ggplot2 mvoutlier org_Hs_eg_db org_Mm_eg_db robustbase topGO]; };
  cellmigRation = derive2 { name="cellmigRation"; version="1.12.0"; sha256="0ahml812f6hm05dxnlsd59bfspxbi4py205kvs0wlijygfqd1ajy"; depends=[doParallel FactoMineR FME foreach Hmisc matrixStats reshape2 sp SpatialTools tiff vioplot]; };
  cellscape = derive2 { name="cellscape"; version="1.28.0"; sha256="158cbhpjakynvm4glvajvpc1qs2im7bkjgriyvxwd9rs7y4lbfn4"; depends=[dplyr gtools htmlwidgets jsonlite reshape2 stringr]; };
  cellxgenedp = derive2 { name="cellxgenedp"; version="1.8.0"; sha256="0p3x0sfp4gpp64gwrlr71bgfk84wxf1gg19w1dxgihc8gpaxgb23"; depends=[curl dplyr DT httr rjsoncons shiny]; };
  censcyt = derive2 { name="censcyt"; version="1.12.0"; sha256="078s41rvlfwlxr2a651dff5sdbqb507qvicg84k99za6cb4707ry"; depends=[BiocParallel broom_mixed diffcyt dirmult dplyr edgeR fitdistrplus lme4 magrittr MASS mice multcomp purrr rlang S4Vectors stringr SummarizedExperiment survival tibble tidyr]; };
  cfDNAPro = derive2 { name="cfDNAPro"; version="1.10.0"; sha256="0nnqfhqq7702zc4hy05wj7rf83vgjqmnpvw90vkg4zrbc7y5fv3w"; depends=[BiocGenerics BSgenome_Hsapiens_NCBI_GRCh38 BSgenome_Hsapiens_UCSC_hg19 BSgenome_Hsapiens_UCSC_hg38 dplyr GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges magrittr plyranges quantmod rlang Rsamtools stringr tibble]; };
  cfTools = derive2 { name="cfTools"; version="1.4.0"; sha256="0hi9j7a13l18fi2m4w5x8lil1f81izivg8p8hzh3wy8idbsc46m2"; depends=[basilisk BH cfToolsData GenomicRanges R_utils Rcpp]; };
  cfdnakit = derive2 { name="cfdnakit"; version="1.2.0"; sha256="1yzhh76r8zlzdg8mpamsr6jvx4j18wkv4dg2mrgclbdmy10dxhwx"; depends=[Biobase dplyr GenomeInfoDb GenomicRanges ggplot2 IRanges magrittr PSCBS QDNAseq rlang Rsamtools S4Vectors]; };
  cghMCR = derive2 { name="cghMCR"; version="1.62.0"; sha256="07pjh4i0j6wd51k7dyig5dg5vcp8bli50my6aibmqdvrjv0wj60w"; depends=[BiocGenerics CNTools DNAcopy limma]; };
  chihaya = derive2 { name="chihaya"; version="1.4.0"; sha256="10j05n9grh9dzb87hiq06x855c2xhi2c09jryc2ixgxd8jx6g2wy"; depends=[DelayedArray HDF5Array Matrix Rcpp rhdf5 Rhdf5lib]; };
  chimeraviz = derive2 { name="chimeraviz"; version="1.30.0"; sha256="1nx258g96v7548a742201jf6yhjf537b6pkmcijhawchnzfn38vn"; depends=[AnnotationDbi AnnotationFilter BiocStyle Biostrings checkmate data_table dplyr DT ensembldb GenomeInfoDb GenomicAlignments GenomicRanges graph gtools Gviz IRanges magick org_Hs_eg_db org_Mm_eg_db plyr RCircos RColorBrewer Rgraphviz rmarkdown Rsamtools S4Vectors]; };
  chipenrich = derive2 { name="chipenrich"; version="2.28.0"; sha256="01sfl3ik12bha3a57gm34y5gnil0akz9f3qfcp9rxsg7zdj8q1mp"; depends=[AnnotationDbi BiocGenerics chipenrich_data GenomeInfoDb GenomicRanges IRanges lattice latticeExtra MASS mgcv org_Dm_eg_db org_Dr_eg_db org_Hs_eg_db org_Mm_eg_db org_Rn_eg_db plyr rms rtracklayer S4Vectors stringr]; };
  chipseq = derive2 { name="chipseq"; version="1.54.0"; sha256="1rd56knaf0ar8d0nh0mcnrrg5jy0csixig1d4abn1b64vbzrvzpz"; depends=[BiocGenerics GenomicRanges IRanges lattice S4Vectors ShortRead]; };
  chopsticks = derive2 { name="chopsticks"; version="1.70.0"; sha256="1lwl3fs7d2cja6n7wgpxvrplhnblabrrpqk83765aksmrk6sfk81"; depends=[survival]; };
  chromDraw = derive2 { name="chromDraw"; version="2.34.0"; sha256="1r733k8hkdhvapbwbp02ias1fjkr0pxi6m7gk2l9q3m6szydpil8"; depends=[GenomicRanges Rcpp]; };
  chromPlot = derive2 { name="chromPlot"; version="1.32.0"; sha256="187w8qm0kf8297yb5yzkd5rxzx6j03hysgpdm41dc247q50nv046"; depends=[biomaRt GenomicRanges]; };
  chromVAR = derive2 { name="chromVAR"; version="1.26.0"; sha256="092y1x1sbqvjrwmr7sv2r5216wbwwc4lk6kwn57fnvvdnc0hc3sv"; depends=[BiocGenerics BiocParallel Biostrings BSgenome DT GenomeInfoDb GenomicRanges ggplot2 IRanges Matrix miniUI nabor plotly RColorBrewer Rcpp RcppArmadillo Rsamtools Rtsne S4Vectors shiny SummarizedExperiment TFBSTools]; };
  chromstaR = derive2 { name="chromstaR"; version="1.30.0"; sha256="0swkjq50p3ak0ddyg7pqg37fivdpr3v5jpakn38sk5i5ycn3qf3g"; depends=[bamsignals BiocGenerics chromstaRData doParallel foreach GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges mvtnorm reshape2 Rsamtools S4Vectors]; };
  cicero = derive2 { name="cicero"; version="1.22.0"; sha256="0x5ly5hkqli5b67hiaa6ha02damyps7vb4l51p0az1j5fxl39n8r"; depends=[assertthat Biobase BiocGenerics data_table dplyr FNN GenomicRanges ggplot2 glasso Gviz igraph IRanges Matrix monocle plyr reshape2 S4Vectors stringi stringr tibble tidyr VGAM]; };
  circRNAprofiler = derive2 { name="circRNAprofiler"; version="1.18.0"; sha256="0gjnx4645kd7qag7dzs5dp9lhsv6zg5xn6jna3bap4mginl1jvxi"; depends=[AnnotationHub Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 DESeq2 dplyr edgeR GenomeInfoDb GenomicRanges ggplot2 gwascat IRanges magrittr R_utils readr reshape2 rlang rtracklayer S4Vectors seqinr stringi stringr universalmotif]; };
  cisPath = derive2 { name="cisPath"; version="1.44.0"; sha256="1r1h5sklm6n9spxgj9rww2ib1f75lyz657awdm5ig3sdsk8f1lpn"; depends=[]; };
  cleanUpdTSeq = derive2 { name="cleanUpdTSeq"; version="1.42.0"; sha256="0fc7lwglp9asssh7yvrqr3wrgdcdapi5zh0fkqmddc1w1n83053r"; depends=[Biostrings BSgenome BSgenome_Drerio_UCSC_danRer7 e1071 GenomeInfoDb GenomicRanges IRanges S4Vectors seqinr stringr]; };
  cleaver = derive2 { name="cleaver"; version="1.42.0"; sha256="15v5jk916lfxjnkmjkm9fgza2pdr02hzgyzny29mkjd6ycj2xfa6"; depends=[Biostrings IRanges S4Vectors]; };
  clevRvis = derive2 { name="clevRvis"; version="1.4.0"; sha256="08qmhyhd9z5cpgkccz8jbk81ni51xd4rkv18clzwfk85vbkmjywn"; depends=[colorspace colourpicker cowplot dplyr DT ggiraph ggnewscale ggplot2 ggraph htmlwidgets igraph magrittr patchwork purrr R_utils readr readxl shiny shinycssloaders shinydashboard shinyhelper shinyWidgets tibble]; };
  cliProfiler = derive2 { name="cliProfiler"; version="1.10.0"; sha256="10ikijimbhwijlq19xc8x730ihix19c5z15mq138jj9p85zrqcin"; depends=[Biostrings BSgenome dplyr GenomicRanges ggplot2 rtracklayer S4Vectors]; };
  clippda = derive2 { name="clippda"; version="1.54.0"; sha256="1pfzshvrhqjazmzhznwn1ml8lgrfhwmb6q285bbs3vksgjqyxczw"; depends=[Biobase lattice limma rgl scatterplot3d statmod]; };
  clipper = derive2 { name="clipper"; version="1.44.0"; sha256="1jaf3xsl37jpwpiq9r3w13fa069jmq6b6j2inmfzdy7jx8vbfm0k"; depends=[Biobase corpcor graph gRbase igraph KEGGgraph Matrix qpgraph Rcpp]; };
  clst = derive2 { name="clst"; version="1.52.0"; sha256="0ng8zmqrnjpavl7mz4sh0qfa3bvxd12vh1568f9brm80avypp02j"; depends=[lattice ROC]; };
  clstutils = derive2 { name="clstutils"; version="1.52.0"; sha256="0ry1b3gq2mbdir84pipk8z0dkf0g1mph9yflx3snjdc4izgviasx"; depends=[ape clst lattice rjson RSQLite]; };
  clustComp = derive2 { name="clustComp"; version="1.32.0"; sha256="0dv55dhljb05jk0bqc72f0chkzmlf64wilfxfyric9gb9ksi49kq"; depends=[sm]; };
  clusterExperiment = derive2 { name="clusterExperiment"; version="2.24.0"; sha256="0pi6qnchh89fhfr50fk4hrrkz1r8gfwjcd7254pgiaxcazv2380a"; depends=[ape BiocGenerics BiocSingular cluster DelayedArray edgeR HDF5Array kernlab limma locfdr Matrix matrixStats mbkmeans NMF phylobase pracma RColorBrewer Rcpp S4Vectors scales SingleCellExperiment stringr SummarizedExperiment zinbwave]; };
  clusterProfiler = derive2 { name="clusterProfiler"; version="4.12.0"; sha256="0wmfbr4n8a1mg8g3gl9gnqrvq5p6cfay2858fqx7wxpr2q8yynhz"; depends=[AnnotationDbi DOSE downloader dplyr enrichplot GO_db GOSemSim gson httr igraph magrittr plyr qvalue rlang tidyr yulab_utils]; };
  clusterSeq = derive2 { name="clusterSeq"; version="1.28.0"; sha256="0spf8kv15dchr852apzmwpq27a7gflxvah0yrdyaq7kgqv3107l9"; depends=[baySeq BiocGenerics BiocParallel]; };
  clusterStab = derive2 { name="clusterStab"; version="1.76.0"; sha256="193lwy85202hd5fiqmwi9sd9vcbvm3zlg4grm0xvvaj2np0b3svi"; depends=[Biobase]; };
  clustifyr = derive2 { name="clustifyr"; version="1.16.0"; sha256="14c7jr4q0zij2zqpcm6jihy0ch80yfp67lvhxiakcg33xq1jvmzv"; depends=[cowplot dplyr entropy fgsea ggplot2 httr Matrix matrixStats proxy rlang S4Vectors scales SeuratObject SingleCellExperiment stringr SummarizedExperiment tibble tidyr]; };
  cmapR = derive2 { name="cmapR"; version="1.16.0"; sha256="0gj0s6l7r5dln7h9z5y03bjxj3w73cy4x83ik1cp5nmffabypzm9"; depends=[data_table flowCore matrixStats rhdf5 SummarizedExperiment]; };
  cn_farms = derive2 { name="cn.farms"; version="1.52.0"; sha256="098p6bhibg14ahx2gn2jbqaf537w00428a8mqvzghy9519pwmsqd"; depends=[affxparser Biobase DBI DNAcopy ff lattice oligo oligoClasses preprocessCore snow]; };
  cn_mops = derive2 { name="cn.mops"; version="1.50.0"; sha256="1zf2j36g97i7ija5h2pchlvh24h2s8k3nl9k9iwlh2jxax3hnr97"; depends=[Biobase BiocGenerics GenomeInfoDb GenomicRanges IRanges Rsamtools S4Vectors]; };
  cnvGSA = derive2 { name="cnvGSA"; version="1.48.0"; sha256="1njb31i1fsvisgjjczjbc9qb7w6bz8dh4856gghkb4f9gscn06rk"; depends=[brglm doParallel foreach GenomicRanges splitstackshape]; };
  coGPS = derive2 { name="coGPS"; version="1.48.0"; sha256="07skpib02914bak5zz5rlwp61kkls9pl83yc5d5kalsqpa1sb63m"; depends=[]; };
  coMethDMR = derive2 { name="coMethDMR"; version="1.8.0"; sha256="1a0f0r11jdcf47b9nzswi9j1axhibij09lava57cv48a23hzrj6z"; depends=[AnnotationHub BiocParallel bumphunter ExperimentHub GenomicRanges IRanges lmerTest]; };
  coRdon = derive2 { name="coRdon"; version="1.22.0"; sha256="0zspxfivvc87s3mnyr8rz3a0dhjsmksvpjn4wba2zqc9hig0pkw6"; depends=[Biobase Biostrings data_table dplyr ggplot2 purrr stringr]; };
  codelink = derive2 { name="codelink"; version="1.72.0"; sha256="0maag5ns0j2c7l4pnrgb724108fmp4a2xj8nffk1kw4ag39k9xqc"; depends=[annotate Biobase BiocGenerics limma]; };
  cogena = derive2 { name="cogena"; version="1.38.0"; sha256="0w41i4mvv085pvm0ars31qy0m6alb96kni3k6lcsikqch9nqiv3z"; depends=[amap apcluster Biobase biwt class cluster corrplot devtools doParallel dplyr fastcluster foreach ggplot2 gplots kohonen mclust reshape2 stringr tibble tidyr]; };
  cogeqc = derive2 { name="cogeqc"; version="1.8.0"; sha256="056zj1hlfvzdj22p79nd567fpzlmmk12nyy1w41ymhwfy9azdhha"; depends=[Biostrings ggbeeswarm ggplot2 ggtree igraph jsonlite patchwork reshape2 rlang scales]; };
  cola = derive2 { name="cola"; version="2.10.0"; sha256="014yx4r5as34f6g1xf4amqwkq0xqa66rv8g45r4cd4fp4dv9szzg"; depends=[BiocGenerics brew circlize clue cluster ComplexHeatmap crayon digest doParallel doRNG eulerr foreach GetoptLong GlobalOptions httr impute irlba knitr markdown matrixStats mclust microbenchmark png RColorBrewer Rcpp skmeans xml2]; };
  comapr = derive2 { name="comapr"; version="1.8.0"; sha256="007r7q7p97w5rh8pvgrajlyv09m6h9q8zs0mb8xs1qw3jlkac5z4"; depends=[BiocParallel circlize dplyr foreach GenomeInfoDb GenomicRanges ggplot2 gridExtra Gviz IRanges Matrix plotly plyr RColorBrewer reshape2 rlang S4Vectors scales SummarizedExperiment tidyr]; };
  combi = derive2 { name="combi"; version="1.16.0"; sha256="1s6nxigvmxq5c2y347k87by0krda63lwynvbgagvg9h2lhb588kv"; depends=[alabama BB Biobase cobs DBI ggplot2 limma Matrix nleqslv phyloseq reshape2 SummarizedExperiment tensor vegan]; };
  compEpiTools = derive2 { name="compEpiTools"; version="1.38.0"; sha256="04yhfihszw5s61195435cczk801rb8n29zrh8rqknf0rdyccxb2q"; depends=[AnnotationDbi BiocGenerics Biostrings GenomeInfoDb GenomicFeatures GenomicRanges GO_db gplots IRanges methylPipe Rsamtools S4Vectors topGO XVector]; };
  compSPOT = derive2 { name="compSPOT"; version="1.2.0"; sha256="1gai411y4dcc2ip73wjb56az8kjh0d34z3xij7hdhs72qg4k6955"; depends=[data_table ggplot2 ggpubr gridExtra magrittr plotly]; };
  compcodeR = derive2 { name="compcodeR"; version="1.40.0"; sha256="0szixwgk85qpyag2i8spn0shpl8r6j5xjg90js3rgrx1b8saaqbm"; depends=[ape caTools edgeR ggplot2 gplots gtools KernSmooth knitr lattice limma markdown MASS matrixStats modeest phylolm rmarkdown ROCR shiny shinydashboard sm stringr vioplot]; };
  concordexR = derive2 { name="concordexR"; version="1.4.0"; sha256="0z8h4gr8lj6kpffi1zha4683ha46n5nrlc3yvyrwbf2gflzvdf3y"; depends=[BiocParallel cli DelayedArray ggplot2 Matrix pheatmap rlang scales]; };
  condiments = derive2 { name="condiments"; version="1.12.0"; sha256="0wifi5npnzmwdvh6g2xa998ccl902jka1mfs4xxgrpdbc0rxny8r"; depends=[BiocParallel distinct dplyr Ecume igraph magrittr matrixStats mgcv pbapply RANN SingleCellExperiment slingshot SummarizedExperiment TrajectoryUtils]; };
  consICA = derive2 { name="consICA"; version="2.2.0"; sha256="061v9v4gpxxmb5yn6dhh1r2x52y3ik68v1y59sfaazhlp3kg970x"; depends=[BiocParallel fastICA ggplot2 GO_db graph org_Hs_eg_db pheatmap Rfast sm SummarizedExperiment survival topGO]; };
  consensus = derive2 { name="consensus"; version="1.22.0"; sha256="09g6qmvalbnyskvv6zb49h3ph4xv3rz71y6gdfayh5jmh82nw9fd"; depends=[gplots matrixStats RColorBrewer]; };
  consensusDE = derive2 { name="consensusDE"; version="1.22.0"; sha256="051rcanakn1kmlybhc57cp80rxdgvpd0grldsw014ss8s938nz8z"; depends=[airway AnnotationDbi Biobase BiocGenerics BiocParallel Biostrings data_table dendextend DESeq2 EDASeq edgeR EnsDb_Hsapiens_v86 ensembldb GenomicAlignments GenomicFeatures limma org_Hs_eg_db pcaMethods RColorBrewer Rsamtools RUVSeq S4Vectors SummarizedExperiment TxDb_Dmelanogaster_UCSC_dm3_ensGene]; };
  consensusOV = derive2 { name="consensusOV"; version="1.26.0"; sha256="0a2qrjid6a5yndkhd47km40qv2c3321xypr5mwlwsq5qp48x7vvq"; depends=[Biobase BiocParallel gdata genefu GSVA limma matrixStats randomForest]; };
  consensusSeekeR = derive2 { name="consensusSeekeR"; version="1.32.0"; sha256="0da6k6i372iqh1gnd4g6ifg75hkx2rrlp2bpwf1ai3g31n8ashiw"; depends=[BiocGenerics BiocParallel GenomeInfoDb GenomicRanges IRanges rtracklayer S4Vectors stringr]; };
  conumee = derive2 { name="conumee"; version="1.38.0"; sha256="0ys8z4xgnmbg4dq81mr59imbz3p9j5ymi9y1dk030xrdh5iwi0am"; depends=[DNAcopy GenomeInfoDb GenomicRanges IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest IlluminaHumanMethylationEPICanno_ilm10b2_hg19 IlluminaHumanMethylationEPICmanifest IRanges minfi rtracklayer]; };
  convert = derive2 { name="convert"; version="1.80.0"; sha256="0i4gdd4vhbhkhzij85w4891p9fnqkchxcdqwqqs76ipg1vgrf98v"; depends=[Biobase limma marray]; };
  copa = derive2 { name="copa"; version="1.72.0"; sha256="1v8xz09ylcja9d4gq3icm6y8k8jkavicnj22iidjnj0c2r03jwg6"; depends=[Biobase]; };
  corral = derive2 { name="corral"; version="1.14.0"; sha256="14zf8ya8yrr2bbxg8iiwxn3l7qvii0bmiwwdmypgv1qi32hx9ckp"; depends=[ggplot2 ggthemes gridExtra irlba Matrix MultiAssayExperiment pals reshape2 SingleCellExperiment SummarizedExperiment transport]; };
  coseq = derive2 { name="coseq"; version="1.28.0"; sha256="0g24q3wb15qnj3igbj93k0rlw1s6ylgzhi8106qfmpybnq3rcry5"; depends=[BiocParallel capushe compositions corrplot DESeq2 e1071 edgeR ggplot2 HTSCluster HTSFilter mvtnorm Rmixmod S4Vectors scales SummarizedExperiment]; };
  cosmiq = derive2 { name="cosmiq"; version="1.38.0"; sha256="0rvayjwg9f3ns8mv657sww9azjjbavxfxcshazn48j7rvr4bqx8z"; depends=[faahKO MassSpecWavelet pracma Rcpp xcms]; };
  cosmosR = derive2 { name="cosmosR"; version="1.12.0"; sha256="0rpy6dysf5p892dcad4z45i607km23pah4iq448g5mbzypsjkqsw"; depends=[CARNIVAL decoupleR dorothea dplyr GSEABase igraph progress purrr rlang stringr visNetwork]; };
  countsimQC = derive2 { name="countsimQC"; version="1.22.0"; sha256="0zrxi7zvdiv1xx3hiy15a3wjgqvywikixx8lq3qx85dw2kz3nfpf"; depends=[caTools DESeq2 dplyr DT edgeR genefilter GenomeInfoDbData ggplot2 ragg randtests rmarkdown SummarizedExperiment tidyr]; };
  covEB = derive2 { name="covEB"; version="1.30.0"; sha256="15yz54dhjwz6iafmvq33l43z3w887a6b7i150rqi23rzs9mabixa"; depends=[Biobase gsl igraph LaplacesDemon Matrix mvtnorm]; };
  covRNA = derive2 { name="covRNA"; version="1.30.0"; sha256="12j69j73fkfn3s20jcyixp71a5j37m405962mxa2pihlqsrh7sxl"; depends=[ade4 Biobase genefilter]; };
  cpvSNP = derive2 { name="cpvSNP"; version="1.36.0"; sha256="0kn65jzx9cif1w3hqyfjkxdcpnlk9b8msv3rk0ahdsln1d0mnyw6"; depends=[BiocParallel corpcor GenomicFeatures ggplot2 GSEABase plyr]; };
  cqn = derive2 { name="cqn"; version="1.50.0"; sha256="1gjfpz696lpvbbm38ni8b8xxkjik6zb4drhc5gd559ccp3ddy8kn"; depends=[mclust nor1mix preprocessCore quantreg]; };
  crisprBase = derive2 { name="crisprBase"; version="1.8.0"; sha256="1zw4syj12agcvjzjn3ffsd50vffsdgya7yfz62dy73wj4m2l2whq"; depends=[BiocGenerics Biostrings GenomicRanges IRanges S4Vectors stringr]; };
  crisprBowtie = derive2 { name="crisprBowtie"; version="1.8.0"; sha256="0fyihnmrl92nl1r85axz9bck6l9clvc5a6px0214i064w8dn1njj"; depends=[BiocGenerics Biostrings BSgenome crisprBase GenomeInfoDb GenomicRanges IRanges Rbowtie readr stringr]; };
  crisprBwa = derive2 { name="crisprBwa"; version="1.8.0"; sha256="1vz99b632fzxdlpw5n2z2mbx7sb9hng58np1ra7gqc2wypk0sa8x"; depends=[BiocGenerics BSgenome crisprBase GenomeInfoDb Rbwa readr stringr]; };
  crisprDesign = derive2 { name="crisprDesign"; version="1.6.0"; sha256="1zv8cc52r13b47r44qph892fhbgy1xp8xz4xf1hfyqgd7ywcl9kb"; depends=[AnnotationDbi BiocGenerics Biostrings BSgenome crisprBase crisprBowtie crisprScore GenomeInfoDb GenomicFeatures GenomicRanges IRanges Matrix MatrixGenerics rtracklayer S4Vectors txdbmaker VariantAnnotation]; };
  crisprScore = derive2 { name="crisprScore"; version="1.8.0"; sha256="1czg5l4bvi5j3afip74qgl1kqgcllb5s1gz6sy7qk1cbf1fmvril"; depends=[basilisk basilisk_utils BiocGenerics Biostrings crisprScoreData IRanges randomForest reticulate stringr XVector]; };
  crisprShiny = derive2 { name="crisprShiny"; version="1.0.0"; sha256="0fmp0gi70cv3g4c00l6g58kww9cg9rvpkhg8lsii9j8p8fj6hsjd"; depends=[BiocGenerics Biostrings BSgenome crisprBase crisprDesign crisprScore crisprViz DT GenomeInfoDb htmlwidgets pwalign S4Vectors shiny shinyBS shinyjs waiter]; };
  crisprVerse = derive2 { name="crisprVerse"; version="1.6.0"; sha256="0f81bf65xz5z5yj9iyyk3h8asyd5hg3hv3157w0kq4ablz8jr7iq"; depends=[BiocManager cli crisprBase crisprBowtie crisprDesign crisprScore crisprScoreData crisprViz rlang]; };
  crisprViz = derive2 { name="crisprViz"; version="1.6.0"; sha256="1bbawsmah9h12kxwcq97q1mjbkniivfafm95k299bb93baqillih"; depends=[BiocGenerics Biostrings BSgenome crisprBase crisprDesign GenomeInfoDb GenomicFeatures GenomicRanges Gviz IRanges S4Vectors txdbmaker]; };
  crlmm = derive2 { name="crlmm"; version="1.62.0"; sha256="0b0zwawxm07iy5g9z17057dsifrwyyl5rkgn09k7vh8rkfxbdydx"; depends=[affyio beanplot Biobase BiocGenerics ellipse ff foreach illuminaio lattice limma matrixStats mvtnorm oligoClasses preprocessCore RcppEigen VGAM]; };
  crossmeta = derive2 { name="crossmeta"; version="1.30.0"; sha256="1ghgfby1rl3phldyipli550f0i289yanb0v4nzn5l1xnpkxaj6fa"; depends=[affxparser affy AnnotationDbi Biobase BiocGenerics BiocManager data_table DBI DT edgeR fdrtool GEOquery limma matrixStats metaMA miniUI oligo RCurl reader readxl RSQLite shiny shinyBS shinyjs shinypanel shinyWidgets stringr sva tibble XML]; };
  csaw = derive2 { name="csaw"; version="1.38.0"; sha256="0a870z480an3wwbp6z4qy034kvk6bvrydgk2if7x4q9k3qvknsz0"; depends=[BiocGenerics BiocParallel edgeR GenomeInfoDb GenomicRanges IRanges limma Matrix metapod Rcpp Rhtslib Rsamtools S4Vectors SummarizedExperiment zlibbioc]; };
  csdR = derive2 { name="csdR"; version="1.10.0"; sha256="13g6rq95888l4ach0yrw6nrfvyxnw3b5ni01v875gfk5jl9jcllv"; depends=[glue matrixStats Rcpp RhpcBLASctl WGCNA]; };
  ctc = derive2 { name="ctc"; version="1.78.0"; sha256="09whaam2r30dq8y9r6vvc0r4sisz78c921bgx7wj6cmn2nvpgf9q"; depends=[amap]; };
  ctsGE = derive2 { name="ctsGE"; version="1.30.0"; sha256="1pqww9r71zjq4qcssffs94q2fx177jlv9n6vkm3qm9j943r1cy58"; depends=[ccaPP ggplot2 limma reshape2 shiny stringr]; };
  cummeRbund = derive2 { name="cummeRbund"; version="2.46.0"; sha256="0hdm2214waz02ybr264xis48kj2anpad80jk640p49v9r17iia9l"; depends=[Biobase BiocGenerics fastcluster ggplot2 Gviz plyr reshape2 RSQLite rtracklayer S4Vectors]; };
  customCMPdb = derive2 { name="customCMPdb"; version="1.14.0"; sha256="1j56542mp1gimnbbakbilkmb59jngvx8w47ycnaj8c1j1yhar9ll"; depends=[AnnotationHub BiocFileCache ChemmineR rappdirs RSQLite XML]; };
  customProDB = derive2 { name="customProDB"; version="1.44.0"; sha256="1pxn9nq84h9xgn2g0jzigbw7pbv4sjvf4jkzalp7l3yjax5llq3i"; depends=[AhoCorasickTrie AnnotationDbi biomaRt Biostrings DBI GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges plyr RCurl Rsamtools RSQLite rtracklayer S4Vectors stringr txdbmaker VariantAnnotation]; };
  cyanoFilter = derive2 { name="cyanoFilter"; version="1.12.0"; sha256="1nymq5qiw5s2nfa67mccv0jn6gxy5y6sx483cw87j5pbmvg579rx"; depends=[Biobase cytometree flowClust flowCore flowDensity GGally ggplot2 mrfDepth]; };
  cycle = derive2 { name="cycle"; version="1.58.0"; sha256="0jhjjnxyx5byjdf7rh1ci1gdf8djgi4ksm17rrrrnwyrcg6y3dyb"; depends=[Biobase Mfuzz]; };
  cydar = derive2 { name="cydar"; version="1.28.0"; sha256="16lr3sry647wns2ycv3b604fmsma3a944g85c4ik7xk7ij1ady47"; depends=[Biobase BiocGenerics BiocNeighbors BiocParallel flowCore Rcpp S4Vectors shiny SingleCellExperiment SummarizedExperiment viridis]; };
  cypress = derive2 { name="cypress"; version="1.0.0"; sha256="0dyywkg41ihff6f2f6p7854qkgx3lav1rviicrik2nlxg4scl034"; depends=[abind BiocParallel checkmate DESeq2 dplyr e1071 edgeR MASS mvtnorm preprocessCore PROPER RColorBrewer rlang sirt SummarizedExperiment TCA tibble TOAST]; };
  cytoKernel = derive2 { name="cytoKernel"; version="1.10.0"; sha256="0pzcsxshc60myzhq57gxyzrfd590ggydj2nq0byca7vyzxc6z3y6"; depends=[ashr BiocParallel circlize ComplexHeatmap data_table dplyr magrittr Rcpp rlang S4Vectors SummarizedExperiment]; };
  cytoMEM = derive2 { name="cytoMEM"; version="1.8.0"; sha256="1dxam2ycwpjmk4z3jgz90swach8k2skjsq4nlh2hj694iqs4f6zj"; depends=[flowCore gplots matrixStats]; };
  cytofQC = derive2 { name="cytofQC"; version="1.4.0"; sha256="1gn383vchgxs62z9p5h7b0wnakwmwclsk46px6ah1cagykrfgas3"; depends=[CATALYST e1071 EZtune flowCore gbm ggplot2 hrbrthemes matrixStats randomForest rmarkdown S4Vectors SingleCellExperiment ssc SummarizedExperiment]; };
  cytolib = derive2 { name="cytolib"; version="2.16.0"; sha256="0nrj892jihi4fv58si3il42s0vyz3gm4gmb65kidkky63gmsy6iq"; depends=[BH Rhdf5lib RProtoBufLib]; };
  cytomapper = derive2 { name="cytomapper"; version="1.16.0"; sha256="1njdhhnzy639v4w07wvgj2gygsipzkfzhbrw63fvxfpf4r1xjzix"; depends=[BiocParallel DelayedArray EBImage ggbeeswarm ggplot2 HDF5Array matrixStats nnls raster RColorBrewer rhdf5 S4Vectors shiny shinydashboard SingleCellExperiment SpatialExperiment SummarizedExperiment svglite svgPanZoom viridis]; };
  cytoviewer = derive2 { name="cytoviewer"; version="1.4.0"; sha256="0s7jnr3z7p6v6x17a9a6cv9vbqgfk8snamcw8qkjpfd613gwk43r"; depends=[archive colourpicker cytomapper EBImage RColorBrewer S4Vectors shiny shinycssloaders shinydashboard SingleCellExperiment SummarizedExperiment svglite svgPanZoom viridis]; };
  dStruct = derive2 { name="dStruct"; version="1.10.0"; sha256="144hyris6fsbs28pz4643njnpjfb0n9w6pm220q5hid4zvhn7dh7"; depends=[ggplot2 IRanges purrr reshape2 rlang S4Vectors zoo]; };
  daMA = derive2 { name="daMA"; version="1.76.0"; sha256="1hv43r6rymp09fl7vgr8jf6naixkrgl282ggf6nva0jxf1jnfmb3"; depends=[MASS]; };
  dada2 = derive2 { name="dada2"; version="1.32.0"; sha256="1ac0nb5bcmzmqpi3vjdmns6xqq3ar61dks6qb3c0k48c78w88b7b"; depends=[BiocGenerics Biostrings ggplot2 IRanges Rcpp RcppParallel reshape2 ShortRead XVector]; };
  dagLogo = derive2 { name="dagLogo"; version="1.42.0"; sha256="1qaa63ymsirwdvy9z82c81kknhqcpip7bry4b9d8xan48m5f63xl"; depends=[BiocGenerics biomaRt Biostrings httr motifStack pheatmap UniProt_ws]; };
  dar = derive2 { name="dar"; version="1.0.0"; sha256="0l5hjx86n34k3b4cdlndl5gh62f3jxps1iq2ir3fzacpxqsimkjw"; depends=[cli ComplexHeatmap crayon dplyr generics ggplot2 glue gplots heatmaply magrittr mia phyloseq purrr readr rlang scales stringr tibble tidyr UpSetR waldo]; };
  dcGSA = derive2 { name="dcGSA"; version="1.32.0"; sha256="0203pdlv1f9s4zyh6hn2jls6b1pc8rzagrdyvsg50dk187qfvjja"; depends=[BiocParallel Matrix]; };
  dcanr = derive2 { name="dcanr"; version="1.20.0"; sha256="15way811xnlhb3qafvfibvqsvx72h8hr0jbwxvqd2dzc2gmkq2ib"; depends=[circlize doRNG foreach igraph Matrix plyr RColorBrewer reshape2 stringr]; };
  dce = derive2 { name="dce"; version="1.12.0"; sha256="1fxcbf21i8k5zydv4qqm41pm3lawkc66ic2rxhlgiwlh7c49awam"; depends=[assertthat dplyr edgeR epiNEM expm ggplot2 ggraph glm2 glue graph graphite harmonicmeanp igraph logger magrittr MASS Matrix metap mnem naturalsort org_Hs_eg_db pcalg ppcor purrr reshape2 Rgraphviz rlang shadowtext tidygraph tidyverse]; };
  ddCt = derive2 { name="ddCt"; version="1.60.0"; sha256="1q2j80wn5x0lkhpd0krsnw99rrn3kqn09d8xdi778cmvsgqxpahg"; depends=[Biobase BiocGenerics lattice RColorBrewer xtable]; };
  ddPCRclust = derive2 { name="ddPCRclust"; version="1.24.0"; sha256="0nmnhykwzbyf2y9i3fi5hgwvc7m7bcikyr3c3nxyaw95f8cc52dp"; depends=[clue flowCore flowDensity flowPeaks ggplot2 openxlsx plotrix R_utils SamSPECTRAL]; };
  dearseq = derive2 { name="dearseq"; version="1.16.0"; sha256="0hy8cnqyvp2mrhj5wi1shh1cba79c5z8f17mfw764s2d6ivsfzz6"; depends=[CompQuadForm dplyr ggplot2 KernSmooth magrittr matrixStats patchwork pbapply reshape2 rlang scattermore statmod survey tibble viridisLite]; };
  debCAM = derive2 { name="debCAM"; version="1.22.0"; sha256="1lbgwv7009fpwqw6kl94gmm44xypn60r8kcm3fjzgbjbwijriwgq"; depends=[apcluster Biobase BiocParallel corpcor DMwR2 geometry NMF nnls pcaPP rJava SummarizedExperiment]; };
  debrowser = derive2 { name="debrowser"; version="1.32.0"; sha256="0qgnx44j6lxw48wlpslagjq71mfx09vrfjq528z7vzn4phrax0by"; depends=[annotate AnnotationDbi apeglm ashr clusterProfiler colourpicker DESeq2 DOSE DT edgeR enrichplot GenomicRanges ggplot2 gplots Harman heatmaply igraph IRanges jsonlite limma org_Hs_eg_db org_Mm_eg_db pathview plotly RColorBrewer RCurl reshape2 S4Vectors shiny shinyBS shinydashboard shinyjs stringi SummarizedExperiment sva]; };
  decompTumor2Sig = derive2 { name="decompTumor2Sig"; version="2.20.0"; sha256="1pnxnxz9zsxqs7cbxgkjapr57k2m1d57w5hak0dwcy5zcxjzmai8"; depends=[BiocGenerics Biostrings BSgenome_Hsapiens_UCSC_hg19 data_table GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 ggseqlogo gridExtra Matrix plyr quadprog readxl S4Vectors SummarizedExperiment TxDb_Hsapiens_UCSC_hg19_knownGene VariantAnnotation]; };
  decontX = derive2 { name="decontX"; version="1.2.0"; sha256="0bxpzc9fib47c5prnshzykfd5a3mcik9n1ayd7jxygxy36icgqcj"; depends=[BH celda dbscan DelayedArray ggplot2 Matrix MCMCprecision patchwork plyr Rcpp RcppEigen RcppParallel reshape2 rstan rstantools S4Vectors scater Seurat SingleCellExperiment StanHeaders SummarizedExperiment withr]; };
  decontam = derive2 { name="decontam"; version="1.24.0"; sha256="1xjd9jzxlj6gfd6fnygzm21q1wy5x5pl031sq1q0svq3jlnzvgb7"; depends=[ggplot2 reshape2]; };
  deconvR = derive2 { name="deconvR"; version="1.10.0"; sha256="181dxjj8bzy1b9xq9hd3m3ak1698w7j0sf8h9g0bhf3blzlj4pmi"; depends=[assertthat BiocGenerics data_table dplyr e1071 foreach GenomicRanges IRanges magrittr MASS matrixStats methylKit minfi nnls quadprog rsq S4Vectors tidyr]; };
  decoupleR = derive2 { name="decoupleR"; version="2.10.0"; sha256="060ww5hlzk0dvh7a52i1nrz1s2xq5mmlw70rxpcs6d4j08k1cmic"; depends=[BiocParallel broom dplyr magrittr Matrix parallelly purrr rlang stringr tibble tidyr tidyselect withr]; };
  deepSNV = derive2 { name="deepSNV"; version="1.50.0"; sha256="1rcq2bg4z6z7czqi662w5gsdc1vd4p8vb353hqayhciv31dz51fr"; depends=[Biostrings GenomicRanges IRanges Rhtslib SummarizedExperiment VariantAnnotation VGAM]; };
  deltaCaptureC = derive2 { name="deltaCaptureC"; version="1.18.0"; sha256="019c6rlsl4glc4vkbz3kfcn9d9rh3vnfw0xbcsi33hk51z89qc78"; depends=[DESeq2 GenomicRanges ggplot2 IRanges SummarizedExperiment tictoc]; };
  deltaGseg = derive2 { name="deltaGseg"; version="1.44.0"; sha256="0jdlcsajpksr58nj551r6biwir20k67ysa42bcingcrgii740yyk"; depends=[changepoint fBasics ggplot2 pvclust reshape scales tseries wavethresh]; };
  demuxSNP = derive2 { name="demuxSNP"; version="1.2.0"; sha256="0inswz7w97wdy7bhl6p87cyr11z77ipf1rsmri9c2nra8s3ix51d"; depends=[BiocGenerics class demuxmix dplyr ensembldb GenomeInfoDb IRanges KernelKnn Matrix MatrixGenerics SingleCellExperiment SummarizedExperiment VariantAnnotation]; };
  demuxmix = derive2 { name="demuxmix"; version="1.6.0"; sha256="18wn36rs7iif2cxz0iz17i0dba0llk2zkw7c81bi9v4c7lsijbcb"; depends=[ggplot2 gridExtra MASS Matrix]; };
  densvis = derive2 { name="densvis"; version="1.14.0"; sha256="1xsafzcg6psb4ld7nk4wgdaa3xhy8i2v86asasf8h3mi1ms7lcv0"; depends=[assertthat basilisk irlba Rcpp reticulate Rtsne]; };
  derfinder = derive2 { name="derfinder"; version="1.38.0"; sha256="1i4m20wb08zncksz415jl8bd5r4gdygk7324cp6xhijrc1pfzl1i"; depends=[AnnotationDbi BiocGenerics BiocParallel bumphunter derfinderHelper GenomeInfoDb GenomicAlignments GenomicFeatures GenomicFiles GenomicRanges Hmisc IRanges qvalue Rsamtools rtracklayer S4Vectors]; };
  derfinderHelper = derive2 { name="derfinderHelper"; version="1.38.0"; sha256="0186wjrszf6c5amibmdblabx3cfvq7p7k6kza38gahw0p7ibwv21"; depends=[IRanges Matrix S4Vectors]; };
  derfinderPlot = derive2 { name="derfinderPlot"; version="1.38.0"; sha256="177j7bl552n80p2rip0zxjn72yf3pv6xg6g1hi312vapfvymcfbl"; depends=[derfinder GenomeInfoDb GenomicFeatures GenomicRanges ggbio ggplot2 IRanges limma plyr RColorBrewer reshape2 S4Vectors scales]; };
  destiny = derive2 { name="destiny"; version="3.18.0"; sha256="0w7j6xh0gzhahk1r8w2wgnylq5v476jzz0g14yjmszfkzm10va3h"; depends=[Biobase BiocGenerics ggplot_multistats ggplot2 ggthemes irlba knn_covertree Matrix pcaMethods proxy Rcpp RcppEigen RcppHNSW rlang RSpectra scales scatterplot3d SingleCellExperiment smoother SummarizedExperiment tidyr tidyselect VIM]; };
  diffGeneAnalysis = derive2 { name="diffGeneAnalysis"; version="1.86.0"; sha256="1zhgsr2xs2dk45r7msy0qrrsjk21gk622d1wayflhbxsg2s9jlb1"; depends=[minpack_lm]; };
  diffHic = derive2 { name="diffHic"; version="1.36.1"; sha256="1wzlzmmrxmnwgqkxqwga73x0kpj7d968c7jgrln9xfilhhn4fkyy"; depends=[BiocGenerics Biostrings BSgenome csaw edgeR GenomeInfoDb GenomicRanges InteractionSet IRanges limma locfit Rcpp rhdf5 Rhtslib Rsamtools rtracklayer S4Vectors SummarizedExperiment zlibbioc]; };
  diffUTR = derive2 { name="diffUTR"; version="1.12.0"; sha256="1rh3ndi8z6j4zr63w7nyvf5knrknzpl9525h3v9pc8m7gbk0jwk2"; depends=[ComplexHeatmap DEXSeq dplyr edgeR ensembldb GenomeInfoDb GenomicRanges ggplot2 ggrepel IRanges limma matrixStats Rsubread rtracklayer S4Vectors stringi SummarizedExperiment viridisLite]; };
  diffcoexp = derive2 { name="diffcoexp"; version="1.24.0"; sha256="1cana6v3k7qab0x0fngl4abvh4nrznjwqhaq9m6qwn75ils3bh3f"; depends=[BiocGenerics DiffCorr igraph psych SummarizedExperiment WGCNA]; };
  diffcyt = derive2 { name="diffcyt"; version="1.24.0"; sha256="1iyqvang5j55s19skd44c1zsxkphn3qqbl4sjhsw1y820ylws5r1"; depends=[circlize ComplexHeatmap dplyr edgeR flowCore FlowSOM limma lme4 magrittr multcomp reshape2 S4Vectors SummarizedExperiment tidyr]; };
  diffuStats = derive2 { name="diffuStats"; version="1.24.0"; sha256="1d46rly5y4xc7hgjhvz2wlx6193jzpw3j8kkjvybr57d9vkl7x8s"; depends=[checkmate expm igraph MASS Matrix plyr precrec Rcpp RcppArmadillo RcppParallel]; };
  diggit = derive2 { name="diggit"; version="1.36.0"; sha256="1fmz15jrdk9395a5wapwkld33xkmvr44xy2qmg8r3l21ayr7j63g"; depends=[Biobase ks viper]; };
  dinoR = derive2 { name="dinoR"; version="1.0.0"; sha256="10fmj0f3fgga26rs39c9z69w0lnb4i2i00vq354s1qh0ciya6xpc"; depends=[BiocGenerics circlize ComplexHeatmap cowplot dplyr edgeR GenomicRanges ggplot2 Matrix rlang stringr SummarizedExperiment tibble tidyr tidyselect]; };
  dir_expiry = derive2 { name="dir.expiry"; version="1.12.0"; sha256="03958xwwywsl5ql6ss1rbkklk49ksgvbp4nqcmmqhn1hiwwn8rvi"; depends=[filelock]; };
  discordant = derive2 { name="discordant"; version="1.28.0"; sha256="034nxwm0z3r0cbjpg8l6cwc6f4jnlj8v9q7r9c9ha9xk6xbah0yr"; depends=[Biobase biwt dplyr gtools MASS Rcpp]; };
  distinct = derive2 { name="distinct"; version="1.16.0"; sha256="19xpnll4fksbw5hbk3g7a8m34p7jqj31vm7jxapwxxkmng17cpka"; depends=[doParallel doRNG foreach ggplot2 limma Matrix Rcpp RcppArmadillo scater SingleCellExperiment SummarizedExperiment]; };
  dittoSeq = derive2 { name="dittoSeq"; version="1.16.0"; sha256="15p01f3yaan9x7y6ld1kx40jnbcn6vjjm5n6ir7cicdvv4w5ln49"; depends=[colorspace cowplot ggplot2 ggrepel ggridges gridExtra pheatmap reshape2 S4Vectors SingleCellExperiment SummarizedExperiment]; };
  divergence = derive2 { name="divergence"; version="1.20.0"; sha256="0gm9p5lnxyfww5djgar1kp1lfmi2a30w2xbmh456a2808xdygdgf"; depends=[SummarizedExperiment]; };
  dks = derive2 { name="dks"; version="1.50.0"; sha256="1j7xbdxk5ghh76fys6vnhnxf627xl70h4b7jn2mladgjw0cszklk"; depends=[cubature]; };
  dmrseq = derive2 { name="dmrseq"; version="1.24.0"; sha256="0p7xpyl1wni17y7qsincpvllaynxwppmyg6hsza51srs4dhr7sf1"; depends=[AnnotationHub annotatr BiocParallel bsseq bumphunter DelayedMatrixStats GenomeInfoDb GenomicRanges ggplot2 IRanges locfit matrixStats nlme outliers RColorBrewer rtracklayer S4Vectors]; };
  doppelgangR = derive2 { name="doppelgangR"; version="1.32.0"; sha256="1kxw5x1fwdn2hzzf6ckxz0k8qqghvr0qdx3fgx31jdla0zc9z1zm"; depends=[Biobase BiocParallel digest impute mnormt SummarizedExperiment sva]; };
  doseR = derive2 { name="doseR"; version="1.20.0"; sha256="09zr2r1vk1azrjwgx2bklv5sdypl3dba0szvh21nw1ndqyk9lwic"; depends=[digest edgeR lme4 matrixStats mclust RUnit S4Vectors SummarizedExperiment]; };
  doubletrouble = derive2 { name="doubletrouble"; version="1.4.0"; sha256="0xfrpz3ilxapcclxgf7drkwcrhvn2d70fx6q139faslp1zs19bv0"; depends=[AnnotationDbi BiocParallel Biostrings GenomicFeatures GenomicRanges ggplot2 mclust MSA2dist rlang syntenet]; };
  drawProteins = derive2 { name="drawProteins"; version="1.24.0"; sha256="1ap2lclwpr532pzapz61pd6lclq3d3idvq4462x19jaivnhf6mr5"; depends=[dplyr ggplot2 httr readr tidyr]; };
  dreamlet = derive2 { name="dreamlet"; version="1.2.1"; sha256="06mpmwjxp7zs9fsggf2b3qc5vgmx6l5s7prl6l7b753zfq5gvjbg"; depends=[ashr beachmat BiocGenerics BiocParallel broom data_table DelayedArray DelayedMatrixStats dplyr edgeR ggbeeswarm ggplot2 ggrepel GSEABase gtools IRanges irlba limma lme4 mashr MASS Matrix MatrixGenerics metafor purrr Rcpp Rdpack remaCor reshape2 rlang S4Vectors scattermore SingleCellExperiment sparseMatrixStats SummarizedExperiment tidyr variancePartition zenith]; };
  drugTargetInteractions = derive2 { name="drugTargetInteractions"; version="1.12.0"; sha256="079qy3mmv9skiybzh9ls3082wqb3r9x6fn50rgcwziapixlx2rh4"; depends=[AnnotationFilter BiocFileCache biomaRt dplyr ensembldb rappdirs RSQLite S4Vectors UniProt_ws]; };
  dupRadar = derive2 { name="dupRadar"; version="1.34.0"; sha256="0wd03v3qqmprv1n8018w0qqaw0majhx2i33qam7vf4rm2ng1gcxj"; depends=[KernSmooth Rsubread]; };
  dyebias = derive2 { name="dyebias"; version="1.64.0"; sha256="1k676kx37f6gdlrld2z7pygdf2cgin0d2cqgas83xizcq07ngnld"; depends=[Biobase marray]; };
  easier = derive2 { name="easier"; version="1.10.0"; sha256="00c0dssv41brpwsh09zh23b7r3y7vax16viwc33nniig3f724id2"; depends=[BiocParallel coin decoupleR DESeq2 dorothea dplyr easierData ggplot2 ggpubr ggrepel magrittr matrixStats progeny quantiseqr reshape2 rlang ROCR rstatix tibble tidyr]; };
  easyRNASeq = derive2 { name="easyRNASeq"; version="2.39.0"; sha256="1dfg8k2jxhnyms7nkgsdyhwca0hnm45c2p3x5dxlm8kd69z7wzdj"; depends=[Biobase BiocFileCache BiocGenerics BiocParallel biomaRt Biostrings edgeR GenomeInfoDb genomeIntervals GenomicAlignments GenomicRanges IRanges locfit LSD rappdirs Rsamtools S4Vectors ShortRead SummarizedExperiment]; };
  easylift = derive2 { name="easylift"; version="1.2.0"; sha256="17kc61n79iiwvwm4zpdh1a7a7q196fjs289kd95z6b7m4sp78l4b"; depends=[BiocFileCache GenomeInfoDb GenomicRanges R_utils rtracklayer]; };
  easyreporting = derive2 { name="easyreporting"; version="1.16.0"; sha256="0nlywvb35w8x90rx1b8535sls3n4kbfzkxrkm5g1ismsdxjs16cj"; depends=[rlang rmarkdown shiny]; };
  ecolitk = derive2 { name="ecolitk"; version="1.76.0"; sha256="1knnvzxlf8gsn3r0sfadlsb4ln2csjizc1i0yffpv75yxrqa0ycd"; depends=[Biobase]; };
  edge = derive2 { name="edge"; version="2.36.0"; sha256="10ddfwnvbh71q4aplb8ykahk8jmd80v0agny9mskmgkry35bi89s"; depends=[Biobase MASS qvalue sva]; };
  edgeR = derive2 { name="edgeR"; version="4.2.0"; sha256="1w3dp3h30jqylbkql33j5ibp9i4vp7n1x6wdd2v0kdnv82il6hqg"; depends=[limma locfit Rcpp]; };
  eds = derive2 { name="eds"; version="1.6.0"; sha256="006d5gx7hz51v2icq6bi1hy8r9g5qgxrf7xf3s72asny2vdn3qw4"; depends=[Matrix Rcpp]; };
  eiR = derive2 { name="eiR"; version="1.44.0"; sha256="1ia8ygj2sashjwign28xfilj7j0a4r03nmgq6qzfsyw679wq4m2v"; depends=[BiocGenerics ChemmineR DBI digest RcppAnnoy RCurl RUnit snow snowfall]; };
  eisaR = derive2 { name="eisaR"; version="1.16.0"; sha256="0in6bkakplpqvfr8zya850sdl0jr4h1qdsw1shvd9wjr3yxdmsad"; depends=[BiocGenerics edgeR GenomicRanges IRanges limma S4Vectors SummarizedExperiment]; };
  enhancerHomologSearch = derive2 { name="enhancerHomologSearch"; version="1.10.0"; sha256="00hm42zvkgz0r3s0k4ljfcbwfkysd1sw6k3zm00fxglgigvfs8r3"; depends=[BiocFileCache BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicRanges httr IRanges jsonlite Matrix motifmatchr pwalign Rcpp rtracklayer S4Vectors]; };
  enrichViewNet = derive2 { name="enrichViewNet"; version="1.2.0"; sha256="1xnxkcy0ifhf3d5qfngh5vrxz3699azjjigr17qm4zmq7qdsp7h2"; depends=[DOSE enrichplot gprofiler2 jsonlite RCy3 strex stringr]; };
  enrichplot = derive2 { name="enrichplot"; version="1.24.0"; sha256="0rkp1zidz34h4d02m4jqv509vw0wyrc084hvj3lxr7mb9j7rnq48"; depends=[aplot DOSE ggfun ggnewscale ggplot2 ggraph ggtree GOSemSim igraph magrittr plyr purrr RColorBrewer reshape2 rlang scatterpie shadowtext yulab_utils]; };
  ensemblVEP = derive2 { name="ensemblVEP"; version="1.46.0"; sha256="10lq13v2qww8d251digx4g50y3vab6sg9kmxkdy00q40ncn042g6"; depends=[BiocGenerics Biostrings GenomeInfoDb GenomicRanges S4Vectors SummarizedExperiment VariantAnnotation]; };
  ensembldb = derive2 { name="ensembldb"; version="2.28.0"; sha256="10h3ngwq99y0d3ksf0303qjw263ard1zsawpq1pw5n9r5g7xll47"; depends=[AnnotationDbi AnnotationFilter Biobase BiocGenerics Biostrings curl DBI GenomeInfoDb GenomicFeatures GenomicRanges IRanges ProtGenerics Rsamtools RSQLite rtracklayer S4Vectors]; };
  epiNEM = derive2 { name="epiNEM"; version="1.28.0"; sha256="156qj9r121j6c9vr6fh2zi9aaq3kq9gabjxg4l5wj47vj1d427az"; depends=[BoolNet e1071 graph gtools igraph latex2exp lattice latticeExtra minet mnem pcalg RColorBrewer]; };
  epialleleR = derive2 { name="epialleleR"; version="1.12.0"; sha256="1jdhzcs6l3v4765dxlqc7gn2yxy9fvzk94aixl5bqxmn4v4hyasq"; depends=[BH BiocGenerics data_table GenomeInfoDb GenomicRanges Rcpp Rhtslib SummarizedExperiment VariantAnnotation zlibbioc]; };
  epidecodeR = derive2 { name="epidecodeR"; version="1.12.0"; sha256="0gmdmjvl93zgsi9yclscw94y1caspb2pnjawxhv3yqmnhjq3dzhz"; depends=[dplyr EnvStats GenomicRanges ggplot2 ggpubr IRanges rstatix rtracklayer]; };
  epigenomix = derive2 { name="epigenomix"; version="1.44.0"; sha256="1c1lwz5lbq69anpk1q7dhlfrvb66g8vrfyw7130x1c6y5yryk23k"; depends=[beadarray Biobase BiocGenerics GenomeInfoDb GenomicRanges IRanges MCMCpack Rsamtools S4Vectors SummarizedExperiment]; };
  epigraHMM = derive2 { name="epigraHMM"; version="1.12.0"; sha256="1zkb81jd2gsj92yzlxhshaw4csap9b06gyy5gl1qi3k3qkx69dq9"; depends=[bamsignals csaw data_table GenomeInfoDb GenomicRanges ggplot2 ggpubr GreyListChIP IRanges limma magrittr MASS Matrix pheatmap Rcpp RcppArmadillo rhdf5 Rhdf5lib Rsamtools rtracklayer S4Vectors scales SummarizedExperiment]; };
  epimutacions = derive2 { name="epimutacions"; version="1.8.0"; sha256="15lrkz7fqmjg5d2l77xbiqwdd3f2jnbw9nc6l4k6wglw3za3prr1"; depends=[AnnotationDbi AnnotationHub BiocGenerics BiocParallel biomaRt bumphunter ensembldb epimutacionsData ExperimentHub GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 ggrepel gridExtra Gviz Homo_sapiens IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest IlluminaHumanMethylationEPICanno_ilm10b2_hg19 IlluminaHumanMethylationEPICmanifest IRanges isotree matrixStats minfi purrr reshape2 robustbase rtracklayer S4Vectors SummarizedExperiment tibble TxDb_Hsapiens_UCSC_hg18_knownGene TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Hsapiens_UCSC_hg38_knownGene]; };
  epiregulon = derive2 { name="epiregulon"; version="1.0.1"; sha256="0zhnra2kl1r2kh9g21fx3nqyb5sksnf7j81dzhjnwjvmlr52xp8w"; depends=[AnnotationHub AUCell beachmat BiocParallel bluster BSgenome_Hsapiens_UCSC_hg19 BSgenome_Hsapiens_UCSC_hg38 BSgenome_Mmusculus_UCSC_mm10 checkmate entropy ExperimentHub GenomeInfoDb GenomicRanges IRanges lifecycle Matrix motifmatchr Rcpp S4Vectors scMultiome scran scuttle SingleCellExperiment SummarizedExperiment]; };
  epiregulon_extra = derive2 { name="epiregulon.extra"; version="1.0.0"; sha256="04d85zp0yadbxrjk88arnf64hfnw67yqn60y03a0wvrw6hcv1zdz"; depends=[checkmate circlize clusterProfiler ComplexHeatmap ggplot2 ggraph igraph lifecycle Matrix patchwork reshape2 scales scater scran SingleCellExperiment SummarizedExperiment]; };
  epistack = derive2 { name="epistack"; version="1.10.0"; sha256="1kfviv9k43n6hy66x5r5hc2f7vb3y3v81qk1m9549nqvdii7ph5q"; depends=[BiocGenerics GenomicRanges IRanges plotrix S4Vectors SummarizedExperiment]; };
  epistasisGA = derive2 { name="epistasisGA"; version="1.6.0"; sha256="1rq1jgd95zamg3fsyj8nbvg95chjaf9d30xlg8d6rr071ya9f03v"; depends=[batchtools BH bigmemory BiocParallel data_table ggplot2 igraph matrixStats qgraph Rcpp RcppArmadillo survival]; };
  epivizr = derive2 { name="epivizr"; version="2.34.0"; sha256="07y6h9dk0mz5nh1ivbrf1l2smlw7y0ygdmh9k1fn50lc6120dq37"; depends=[bumphunter epivizrData epivizrServer GenomeInfoDb GenomicRanges IRanges S4Vectors]; };
  epivizrChart = derive2 { name="epivizrChart"; version="1.26.0"; sha256="0yq0mqkzvvp5mva24ky7sqa6107rcaxlircw0wg8bsalcxynvgzw"; depends=[BiocGenerics epivizrData epivizrServer htmltools rjson]; };
  epivizrData = derive2 { name="epivizrData"; version="1.32.0"; sha256="11x47w0rvn109brah7140nn5844vvmdpbgdc2c3q2ycxm40fl6rq"; depends=[Biobase ensembldb epivizrServer GenomeInfoDb GenomicFeatures GenomicRanges IRanges OrganismDbi S4Vectors SummarizedExperiment]; };
  epivizrServer = derive2 { name="epivizrServer"; version="1.32.0"; sha256="11ba652yhnl7xi7fgw3s32siwd38mrsxsklm0n6f5v081g3a7g3s"; depends=[httpuv mime R6 rjson]; };
  epivizrStandalone = derive2 { name="epivizrStandalone"; version="1.32.0"; sha256="0qrngsga0qfadbijjikfzgpl6i0vnvkcssnf1z3y1fm8mkq35b4z"; depends=[BiocGenerics epivizr epivizrServer GenomeInfoDb GenomicFeatures git2r S4Vectors]; };
  erccdashboard = derive2 { name="erccdashboard"; version="1.38.0"; sha256="0cghksf9gkgkcak8493s4pixq2nd3a7zc91vqq158g5na6ca24n7"; depends=[edgeR ggplot2 gplots gridExtra gtools limma locfit MASS plyr qvalue reshape2 ROCR scales stringr]; };
  erma = derive2 { name="erma"; version="1.20.0"; sha256="0f4y0szdqhg63vaw7f1lmgzb72bhfpz20g9naq84s8bq2xsf8cy6"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel GenomeInfoDb GenomicFiles GenomicRanges ggplot2 Homo_sapiens IRanges rtracklayer S4Vectors shiny SummarizedExperiment]; };
  esATAC = derive2 { name="esATAC"; version="1.26.0"; sha256="0gfil57zc5bzhk29cw16bv02kng7hqs5ry1kakly1kvcfafcn87s"; depends=[AnnotationDbi BiocGenerics BiocManager Biostrings BSgenome ChIPseeker clusterProfiler corrplot digest GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 igraph IRanges JASPAR2018 knitr magrittr motifmatchr pipeFrame R_utils Rbowtie2 Rcpp rJava rmarkdown Rsamtools rtracklayer S4Vectors ShortRead TFBSTools VennDiagram]; };
  escape = derive2 { name="escape"; version="2.0.0"; sha256="03wbrxd7kjyl3d4s418ql5fv7bmwdfyfp10jd8knr0xis7vxmz2x"; depends=[AUCell BiocParallel dplyr ggdist ggplot2 ggpointdensity ggridges GSEABase GSVA MatrixGenerics msigdbr patchwork reshape2 SeuratObject SingleCellExperiment stringr SummarizedExperiment UCell]; };
  escheR = derive2 { name="escheR"; version="1.4.0"; sha256="16sqxsvpvb9idb7crbr3kq5xcifpzdw29lcxvrn2kxq003n7hbqw"; depends=[ggplot2 rlang SingleCellExperiment SpatialExperiment SummarizedExperiment]; };
  esetVis = derive2 { name="esetVis"; version="1.30.0"; sha256="1b51cv3bl11jymjwnd8150lw5ab7bpa4jj09ssisn3qnb5nym7lj"; depends=[Biobase hexbin MASS MLP mpm Rtsne]; };
  eudysbiome = derive2 { name="eudysbiome"; version="1.34.0"; sha256="12kbk17rfh1icxdj5kkz66d72p9rq4bw9nh52bvah5i3bq7wi5zn"; depends=[Biostrings plyr R_utils Rsamtools]; };
  evaluomeR = derive2 { name="evaluomeR"; version="1.20.0"; sha256="1rcffshqlkilmfyziz95pac4c0rm5jjq0y9i3r47z55zmrnr4lz4"; depends=[class cluster corrplot flexmix fpc ggdendro ggplot2 kableExtra MASS matrixStats mclust MultiAssayExperiment plotrix prabclus randomForest Rdpack reshape2 SummarizedExperiment]; };
  extraChIPs = derive2 { name="extraChIPs"; version="1.8.1"; sha256="0qmm7sffwv2b1qinwm39pahb4i1m2jk4hzwli481by24vc6p1y7j"; depends=[BiocIO BiocParallel broom ComplexUpset csaw dplyr edgeR forcats GenomeInfoDb GenomicInteractions GenomicRanges ggforce ggplot2 ggrepel ggside glue InteractionSet IRanges matrixStats patchwork RColorBrewer rlang Rsamtools rtracklayer S4Vectors scales stringr SummarizedExperiment tibble tidyr tidyselect vctrs VennDiagram]; };
  fCCAC = derive2 { name="fCCAC"; version="1.30.0"; sha256="0qvwsqvv1g4fcjhy88kq2z5nzlhhvx6p6ffaqis70wbgvr5p4aw0"; depends=[ComplexHeatmap fda genomation GenomicRanges ggplot2 IRanges RColorBrewer S4Vectors]; };
  fCI = derive2 { name="fCI"; version="1.34.0"; sha256="0szrdyw57k6wa8zr80gyxidfhcc1v88gj6bjank3dc478f1kn9d0"; depends=[FNN gtools psych rgl VennDiagram zoo]; };
  fabia = derive2 { name="fabia"; version="2.50.0"; sha256="06zlhacfs1mad26pni3fkh3ijh7ca75cr1v2gd62igsw7cf4wdli"; depends=[Biobase]; };
  factDesign = derive2 { name="factDesign"; version="1.80.0"; sha256="1g7vjb3lrx4a5ks9nsr7z7nrbf8d7f83c37b2fwacx56fbps7f51"; depends=[Biobase]; };
  factR = derive2 { name="factR"; version="1.6.0"; sha256="1y19wd0j9rlbfi2rqk73gcyszbg4p4cl2w3zqckyvv9969i9rjid"; depends=[BiocGenerics BiocParallel Biostrings crayon data_table dplyr drawProteins GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 IRanges pbapply purrr RCurl rlang rtracklayer S4Vectors stringr tibble tidyr wiggleplotr XML]; };
  faers = derive2 { name="faers"; version="1.0.0"; sha256="04q6h3hc2697dpk66ra6lppv808n0vgxk1py26nxjkpmqyc076xx"; depends=[BiocParallel brio cli curl data_table httr2 MCMCpack openEBGM rlang rvest vroom xml2]; };
  famat = derive2 { name="famat"; version="1.14.0"; sha256="099l12m27ys5glbigi9q9hr7941yy9jxrzsbxf993gs71qajlsgh"; depends=[BiasedUrn clusterProfiler dplyr DT GO_db gprofiler2 KEGGREST magrittr mgcv ontologyIndex org_Hs_eg_db plotly reactome_db rWikiPathways shiny shinyBS shinydashboard stringr tidyr]; };
  fastLiquidAssociation = derive2 { name="fastLiquidAssociation"; version="1.40.0"; sha256="0nhr2w0b491xh6bc2j9mc9a87yblr3l4kmnm8gxlnc27fav3jzj8"; depends=[doParallel Hmisc impute LiquidAssociation preprocessCore WGCNA]; };
  fastreeR = derive2 { name="fastreeR"; version="1.8.0"; sha256="0r1xngxdblgshgkr4l762kgxqaq9s79g4f3lirlkd9bb248pzfvc"; depends=[ape data_table dynamicTreeCut R_utils rJava stringr]; };
  fastseg = derive2 { name="fastseg"; version="1.50.0"; sha256="03gl7z7q90jy47q57gfbj5fkv5n8hi43jbbrl53bdyp71f26ry2d"; depends=[Biobase BiocGenerics GenomicRanges IRanges S4Vectors]; };
  fcScan = derive2 { name="fcScan"; version="1.18.0"; sha256="1gb15zrv44yn65wns7dk24rp54qv7wafqxgk1q8jnbkq9lp5wj2y"; depends=[doParallel foreach GenomicRanges IRanges plyr rtracklayer SummarizedExperiment VariantAnnotation]; };
  fdrame = derive2 { name="fdrame"; version="1.76.0"; sha256="0a28pw2wi3l8a3x5sxq8aa52fagb678q6wbaajqznx7yflk2s88v"; depends=[]; };
  fedup = derive2 { name="fedup"; version="1.12.0"; sha256="0q1bvx8zv5c1pzi82v8yxgdxb85l7nzan8k6xwsr1xmdy224lpgf"; depends=[data_table dplyr forcats ggplot2 ggthemes openxlsx RColorBrewer RCy3 tibble]; };
  fenr = derive2 { name="fenr"; version="1.2.0"; sha256="0d0rjvnbyp8w3hkb38fgbig1211w4gj74lgdnbx52jxym2pkg32y"; depends=[assertthat BiocFileCache dplyr ggplot2 httr2 progress purrr readr rlang rvest shiny stringr tibble tidyr tidyselect]; };
  ffpe = derive2 { name="ffpe"; version="1.48.0"; sha256="1y769nnwbc9rjjpwxqgfw0v58ym4g9qy695adcyswl8z955yhjax"; depends=[affy Biobase BiocGenerics lumi methylumi sfsmisc TTR]; };
  fgga = derive2 { name="fgga"; version="1.12.0"; sha256="18bvf1qjdzd66sf479ghf3pg4cnwpwmzkhcvi6zriqd7mvsll8fr"; depends=[BiocFileCache curl e1071 graph gRbase igraph jsonlite RBGL]; };
  fgsea = derive2 { name="fgsea"; version="1.30.0"; sha256="0nnvqsyrj24h5y8qw8llk9f4jgy0v734k37kcksfcpja17frdyjy"; depends=[BH BiocParallel cowplot data_table fastmatch ggplot2 Matrix Rcpp scales]; };
  findIPs = derive2 { name="findIPs"; version="1.0.0"; sha256="08vf1i2j9h1174q5sx58hjfa62cbb6ylwzmj4bwkcibazdac5n60"; depends=[Biobase BiocParallel SummarizedExperiment survival]; };
  fishpond = derive2 { name="fishpond"; version="2.10.0"; sha256="02lzx8whxd3z4k0saf0vaq4np8lag00nkp3hd6da1w91vczs1kjl"; depends=[abind GenomicRanges gtools IRanges jsonlite Matrix matrixStats qvalue S4Vectors SingleCellExperiment SummarizedExperiment svMisc]; };
  flagme = derive2 { name="flagme"; version="1.60.0"; sha256="0gi2hwd13q4rdmzf45xcbmdpr3b3hbqabv6csmjfiqqqj4cl3wy9"; depends=[CAMERA gcspikelite gplots MASS SparseM xcms]; };
  flowAI = derive2 { name="flowAI"; version="1.34.0"; sha256="1siqza92iak5lz38hbfznqndrmq995ihp6sbam0n2d3mj8vwv9qa"; depends=[changepoint flowCore ggplot2 knitr plyr RColorBrewer reshape2 rmarkdown scales]; };
  flowBeads = derive2 { name="flowBeads"; version="1.42.0"; sha256="12zj4w37l760a5j3pwd27yjlfx6ywkcw1rxmp83pgmfwkh8jhvj1"; depends=[Biobase flowCore knitr rrcov xtable]; };
  flowBin = derive2 { name="flowBin"; version="1.40.0"; sha256="0g0kxxq4c2zm4yvi2yx1czyiiwhvmlfwvqnkyap4kbid05zy1q1i"; depends=[BiocGenerics class flowCore flowFP limma snow]; };
  flowCHIC = derive2 { name="flowCHIC"; version="1.38.0"; sha256="0zia2gsi53vbmqijljdgxmglssqfmhiqa0bzr5zr03l32aglcp4y"; depends=[EBImage flowCore ggplot2 hexbin vegan]; };
  flowClean = derive2 { name="flowClean"; version="1.42.0"; sha256="1a588wx63q10lpx7w3f0120ngiprgadr66fl3jvwi4g2yhkwpjsr"; depends=[bit changepoint flowCore sfsmisc]; };
  flowClust = derive2 { name="flowClust"; version="3.42.0"; sha256="1zjjzn10nvbj7lhg9kvp8gr7m2m294pa3zdmajq65ffdynaaavnd"; depends=[Biobase BiocGenerics flowCore graph]; };
  flowCore = derive2 { name="flowCore"; version="2.16.0"; sha256="1zq3qypmzk9ld48r50fmygfdqwwyykii8l0l6gh5bdrdan760bfn"; depends=[BH Biobase BiocGenerics cpp11 cytolib matrixStats Rcpp RProtoBufLib S4Vectors]; };
  flowCut = derive2 { name="flowCut"; version="1.14.0"; sha256="0mhdkkv8n1650wmnasprbpr5wm31s5s2in1n60rcsbb78hl7d278"; depends=[Cairo e1071 flowCore flowDensity]; };
  flowCyBar = derive2 { name="flowCyBar"; version="1.40.0"; sha256="0cf7b6wqs3wr274fwj8z346432mziv43dgs2qmx2qs6zlq6p2vya"; depends=[gplots vegan]; };
  flowDensity = derive2 { name="flowDensity"; version="1.38.0"; sha256="17v43jsrgg09ww0ga2dvryvzz4j2skzyhx51vn2lfm13fjbprhcc"; depends=[car flowCore flowViz gplots polyclip]; };
  flowFP = derive2 { name="flowFP"; version="1.62.0"; sha256="1rpmqk4w4ab6wn0gygpyzzxbgs3ds66pa2lr2sy48b4gxalpr3hc"; depends=[Biobase BiocGenerics flowCore flowViz]; };
  flowGate = derive2 { name="flowGate"; version="1.4.0"; sha256="1jag6h8inizjmfi69ybs39y4f0zqhc0rb4rrq5yzgy1s5z4ba9fi"; depends=[BiocManager dplyr flowCore flowWorkspace ggcyto ggplot2 purrr rlang shiny tibble]; };
  flowGraph = derive2 { name="flowGraph"; version="1.12.0"; sha256="1zxpiz8nm3awzkf7wqql73b9kgydgza72yp2kv59gyf1lcsli0ns"; depends=[data_table effsize furrr future ggiraph ggplot2 ggrepel gridExtra htmlwidgets igraph Matrix matrixStats purrr Rdpack stringi stringr visNetwork]; };
  flowMatch = derive2 { name="flowMatch"; version="1.40.0"; sha256="0k83702b9k5nsng67awr7mz3jq9yxs4dkvvg2hcn29m1s42a2i63"; depends=[Biobase flowCore Rcpp]; };
  flowMeans = derive2 { name="flowMeans"; version="1.64.0"; sha256="0bkp3q71qj1r2bwfpfriflqklvcqpvh760as7sr489sb18y1xlms"; depends=[Biobase feature flowCore rrcov]; };
  flowMerge = derive2 { name="flowMerge"; version="2.52.0"; sha256="1z675mj3jsi0n9x03nbw12z001c8jz9pm64ypvb1g6f51bnq1fyx"; depends=[feature flowClust flowCore foreach graph Rgraphviz rrcov snow]; };
  flowPeaks = derive2 { name="flowPeaks"; version="1.50.0"; sha256="065nkldia602w36bks394qdf96330ahnrz9jpks2gv8r91pk7pf5"; depends=[]; };
  flowPloidy = derive2 { name="flowPloidy"; version="1.30.0"; sha256="06grhvskia03xakfcs776fiz7i3i04crysykrmnyz1jxbaa2irba"; depends=[car caTools flowCore knitr minpack_lm rmarkdown shiny]; };
  flowPlots = derive2 { name="flowPlots"; version="1.52.0"; sha256="03kpsfdfr3hwlqjbyq787dnhixg1zs22chi2y1776zjpvxp94ixf"; depends=[]; };
  flowSpecs = derive2 { name="flowSpecs"; version="1.18.0"; sha256="1774h2sgabnynhc8xlc3ngnkspvs544hhb5ijk3xm2p4ah2md0w1"; depends=[Biobase BiocGenerics BiocParallel flowCore ggplot2 reshape2 zoo]; };
  flowStats = derive2 { name="flowStats"; version="4.16.0"; sha256="0q8g3sqmbhinfrb63yhv4lsczjz7pqwhwwsdlz2cg7s8yhp0cj6v"; depends=[Biobase BiocGenerics clue cluster corpcor fda flowCore flowViz flowWorkspace KernSmooth ks lattice MASS mnormt ncdfFlow RColorBrewer rrcov]; };
  flowTime = derive2 { name="flowTime"; version="1.28.0"; sha256="1z7djyka5cpaa3bfgz9q8kwv50k6k5fd666415szfiq5vnlpvn4y"; depends=[dplyr flowCore magrittr plyr rlang tibble]; };
  flowTrans = derive2 { name="flowTrans"; version="1.56.0"; sha256="0i8rr5qrfszh03j5ch90nqf4ayqamh2kk2c7g1brxbi31qvkm9ag"; depends=[flowClust flowCore flowViz]; };
  flowVS = derive2 { name="flowVS"; version="1.36.0"; sha256="1k7rhy3lqc52r4hg68r4rw0l31v37bsp2f8k8palia4bqzmqy375"; depends=[flowCore flowStats flowViz]; };
  flowViz = derive2 { name="flowViz"; version="1.68.0"; sha256="1iz4skfs68jg2a59kfaxllf19mp9pk9mpfc2jh3vyas14c3l3zzj"; depends=[Biobase flowCore hexbin IDPmisc KernSmooth lattice latticeExtra MASS RColorBrewer]; };
  flowWorkspace = derive2 { name="flowWorkspace"; version="4.16.0"; sha256="0k22hifg4sv0xiw983gf1d6y7zkn9072famwj72x47w8vag4i0xz"; depends=[BH Biobase BiocGenerics cpp11 cytolib data_table DelayedArray dplyr flowCore ggplot2 graph matrixStats ncdfFlow RBGL Rgraphviz Rhdf5lib RProtoBufLib S4Vectors scales XML]; };
  flowcatchR = derive2 { name="flowcatchR"; version="1.38.0"; sha256="0g9jza9gs526ch5sa9m91yrmf6n8l73052n41r2zvdwamzh9a6r9"; depends=[abind BiocParallel colorRamps EBImage plotly shiny]; };
  fmcsR = derive2 { name="fmcsR"; version="1.46.0"; sha256="080src34jwkvbk98pa4ri530l9gi4ibr5mwxib1681np0cfal54g"; depends=[BiocGenerics ChemmineR RUnit]; };
  fmrs = derive2 { name="fmrs"; version="1.14.0"; sha256="0vwj90snn2mjai762426c62m5rmmkywpvnjjgv9cns4azzbjqq4y"; depends=[survival]; };
  fobitools = derive2 { name="fobitools"; version="1.12.0"; sha256="0n9zckl2zx7hcqz94xa32frra7v11y4gss1wdcdicj2sm40k9hgq"; depends=[clisymbols crayon dplyr fgsea ggplot2 ggraph magrittr ontologyIndex purrr RecordLinkage stringr textclean tictoc tidygraph tidyr vroom]; };
  frenchFISH = derive2 { name="frenchFISH"; version="1.16.0"; sha256="0lchnhchabj69ccw9pi1nz6l4k39kwin7cdyg9j5zq54i5lwzgg3"; depends=[MCMCpack NHPoisson]; };
  frma = derive2 { name="frma"; version="1.56.0"; sha256="0gg6hybrysqsd04dv3z7p1wx7zb35zk10f76c3yfhxg1wzv0f4wr"; depends=[affy Biobase BiocGenerics DBI MASS oligo oligoClasses preprocessCore]; };
  frmaTools = derive2 { name="frmaTools"; version="1.56.0"; sha256="0ksnk253vvxrfql6wgbzmm64173fqv2lcls83iv4lgihix978x5x"; depends=[affy Biobase DBI preprocessCore]; };
  funtooNorm = derive2 { name="funtooNorm"; version="1.28.0"; sha256="1immis03wkcgzfpb4jbb9zz58707g06mbrq15ls04fmf6mkjj8im"; depends=[GenomeInfoDb IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest matrixStats minfi pls]; };
  gCrisprTools = derive2 { name="gCrisprTools"; version="2.10.0"; sha256="1h7qx8j46sqhkrdln7mbw38w7p3n6c8sw1311kk2pady0bw14hqh"; depends=[Biobase ComplexHeatmap ggplot2 limma rmarkdown RobustRankAggreg SummarizedExperiment]; };
  gDNAx = derive2 { name="gDNAx"; version="1.2.0"; sha256="12pyiwhwlxskq17vwmdwh5g3zlzbd15mbrxjv1pliblbzjvxfpzx"; depends=[AnnotationDbi AnnotationHub BiocGenerics BiocParallel Biostrings bitops cli GenomeInfoDb GenomicAlignments GenomicFeatures GenomicFiles GenomicRanges IRanges matrixStats plotrix RColorBrewer Rsamtools S4Vectors SummarizedExperiment]; };
  gDR = derive2 { name="gDR"; version="1.2.0"; sha256="0jhsnaabp8amljw8g64ly15nc10rjfsk5vd1pxpqq1fzyh72s1xa"; depends=[gDRcore gDRimport gDRutils]; };
  gDRcore = derive2 { name="gDRcore"; version="1.2.0"; sha256="14hnmym7pzgfm4gmvq0dc0bym3kpr769fcdpspvqyzgq3b5swbva"; depends=[BiocParallel BumpyMatrix checkmate data_table futile_logger gDRutils MultiAssayExperiment purrr S4Vectors stringr SummarizedExperiment]; };
  gDRimport = derive2 { name="gDRimport"; version="1.2.0"; sha256="1jfp3vgy2r0kmakn063bp1nrnwjfx2xxz0drkry5ghdmjig0g25y"; depends=[assertthat BumpyMatrix checkmate CoreGx data_table futile_logger gDRutils magrittr MultiAssayExperiment openxlsx PharmacoGx readxl rio S4Vectors stringi SummarizedExperiment tibble XML yaml]; };
  gDRstyle = derive2 { name="gDRstyle"; version="1.2.0"; sha256="0khl0h07ixcsdn984f60d7fshhbs755c6bcxqwk3rzl54xb9cmj8"; depends=[BiocCheck BiocManager checkmate desc git2r lintr pkgbuild rcmdcheck remotes rjson withr yaml]; };
  gDRutils = derive2 { name="gDRutils"; version="1.2.0"; sha256="0ql75k7aysf5kphjkajp2sshg953vx3nskg6qzhd8cc4lvldx9kq"; depends=[BiocParallel BumpyMatrix checkmate data_table drc jsonlite jsonvalidate MultiAssayExperiment S4Vectors stringr SummarizedExperiment]; };
  gINTomics = derive2 { name="gINTomics"; version="1.0.0"; sha256="0dscrxy846v5nv1fc0wfd5v7axwdhwpxhh0y9dwq25sdyfzknl8g"; depends=[AnnotationDbi BiocGenerics BiocParallel biomaRt callr circlize clusterProfiler ComplexHeatmap dplyr DT edgeR GenomicFeatures GenomicRanges ggplot2 ggridges ggtree ggvenn gtools InteractiveComplexHeatmap limma MASS MultiAssayExperiment OmnipathR org_Hs_eg_db org_Mm_eg_db plotly plyr randomForest RColorBrewer ReactomePA reshape2 shiny shiny_gosling shinydashboard stringi stringr SummarizedExperiment TxDb_Hsapiens_UCSC_hg38_knownGene TxDb_Mmusculus_UCSC_mm10_knownGene visNetwork]; };
  gaga = derive2 { name="gaga"; version="2.50.0"; sha256="10qckg06yf44x1giisglw978l63c4p9bdlrfh8q0i7cb19zihbnf"; depends=[Biobase coda EBarrays mgcv]; };
  gage = derive2 { name="gage"; version="2.54.0"; sha256="0iwdv9y5x0na38arjqacz00s7plk7aqc1h2ynhlpbyl3nz0a0kyq"; depends=[AnnotationDbi GO_db graph KEGGREST]; };
  garfield = derive2 { name="garfield"; version="1.32.0"; sha256="0lcfqsv4ffsgnpsxdij5graaryvxqkyvsx7n6bkglclg1syr32dw"; depends=[]; };
  gatom = derive2 { name="gatom"; version="1.2.0"; sha256="1cmhlhr2gkfgpgncr9dy3qq0q764vhr5c7zgpbnnvp5qg95y6n6g"; depends=[BioNet data_table GGally ggplot2 htmltools htmlwidgets igraph intergraph network plyr pryr shinyCyJS sna XML]; };
  gcapc = derive2 { name="gcapc"; version="1.28.0"; sha256="0k6k73i1mv6pxkpy2mq3xr0rfpn8rqa5wj1hjx3r3dqpw4rv8izl"; depends=[BiocGenerics Biostrings BSgenome GenomeInfoDb GenomicAlignments GenomicRanges IRanges MASS matrixStats Rsamtools S4Vectors]; };
  gcatest = derive2 { name="gcatest"; version="2.4.0"; sha256="1jdbiv0mh0kfxn05k349h192b32rzs65l7xjkiw1rpzca649fldn"; depends=[lfa]; };
  gcrma = derive2 { name="gcrma"; version="2.76.0"; sha256="01b9b4v19yh42552awl21yyx9vhf9yh9r3l8849x4zwjpnf6anp3"; depends=[affy affyio Biobase BiocManager Biostrings XVector]; };
  gdsfmt = derive2 { name="gdsfmt"; version="1.40.0"; sha256="1ska6q1800mmsxi6jilpnq4f6cy3vk0nb98gz3ik94lmbv2ram97"; depends=[]; };
  geNetClassifier = derive2 { name="geNetClassifier"; version="1.44.0"; sha256="0jfczma8sh9dza105v306xr371f8mndndm6kw3ydgqlxd8zk3a6l"; depends=[Biobase e1071 EBarrays minet]; };
  gemini = derive2 { name="gemini"; version="1.18.0"; sha256="1yfizm9hk7ak1lgf89zn7r768n82dzbiyd6fqrybhl1m4k5a8zh4"; depends=[dplyr ggplot2 magrittr mixtools pbmcapply scales]; };
  gemma_R = derive2 { name="gemma.R"; version="3.0.6"; sha256="0aprq1ac2npnbs8ic8lq2z1rp67gsff7450sg08gri40mcrn8xz5"; depends=[assertthat Biobase bit64 data_table digest glue httr jsonlite lubridate magrittr memoise rappdirs rlang S4Vectors stringr SummarizedExperiment tibble tidyr]; };
  genArise = derive2 { name="genArise"; version="1.80.0"; sha256="0r5d1nw2bqvh3yivx73l2ln3y78kqsrvx3xm4sw61m48gszb69x5"; depends=[locfit tkrplot xtable]; };
  geneAttribution = derive2 { name="geneAttribution"; version="1.30.0"; sha256="0qzp9d1v88qamahl4knnv6adx863jpnhc5w0v9fpqliw04gqnczn"; depends=[BiocGenerics GenomeInfoDb GenomicFeatures GenomicRanges IRanges org_Hs_eg_db rtracklayer]; };
  geneClassifiers = derive2 { name="geneClassifiers"; version="1.28.0"; sha256="0zsjb7a30jvkskpg2awxxzdq2rnrpy2nrv89qrqq51h5blln4l2r"; depends=[Biobase BiocGenerics]; };
  geneRecommender = derive2 { name="geneRecommender"; version="1.76.0"; sha256="1vd04lqrqzfzjz2xpm0gd2gg38rvfz7c8ikz5ypr82mcbq3v7gfl"; depends=[Biobase]; };
  geneRxCluster = derive2 { name="geneRxCluster"; version="1.40.0"; sha256="109ghiv5j33g35d7l71z8s7nc2vb997j5i6vh43nrrygsgc53ywm"; depends=[GenomicRanges IRanges]; };
  geneXtendeR = derive2 { name="geneXtendeR"; version="1.30.0"; sha256="06rmxlahnf0xiwvyfl6h9727g8cm24zk6p27j5bb4vln4phb81x7"; depends=[AnnotationDbi BiocStyle data_table dplyr GO_db networkD3 org_Rn_eg_db RColorBrewer rtracklayer SnowballC tm wordcloud]; };
  genefilter = derive2 { name="genefilter"; version="1.86.0"; sha256="0jp7jvgzb1bs0p76j9k8lhgliipjnif6bng7hdn5wi744jb5fmpr"; depends=[annotate AnnotationDbi Biobase MatrixGenerics survival]; };
  genefu = derive2 { name="genefu"; version="2.36.0"; sha256="032xfs2vp0n0r3sz79fs0v8q28n2sqbnazfwkc3p9dwh4s7nqfwx"; depends=[AIMS amap biomaRt impute limma mclust survcomp]; };
  geneplast = derive2 { name="geneplast"; version="1.30.0"; sha256="1z76dpa7cmzidw3512ynphrrqcqvbrp1bbl8bzcf3jsjdshy7mm7"; depends=[ape data_table igraph snow]; };
  geneplotter = derive2 { name="geneplotter"; version="1.82.0"; sha256="19znr3vwp20x84jiwy0im7s6vd8a71yng8w2ji88ffzq0xdkyyjm"; depends=[annotate AnnotationDbi Biobase BiocGenerics lattice RColorBrewer]; };
  genoCN = derive2 { name="genoCN"; version="1.56.0"; sha256="1nqxp99g3maxjip9mvpkdm2n6v5vmw7dnkni3nfv2azd12cl9ka1"; depends=[]; };
  genomation = derive2 { name="genomation"; version="1.36.0"; sha256="1bfy46kka77q93s42hsbxpiynfkin5mh7cz3w592smw2dzkh01j4"; depends=[Biostrings BSgenome data_table GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gridBase impute IRanges matrixStats plotrix plyr Rcpp readr reshape2 Rsamtools rtracklayer S4Vectors seqPattern]; };
  genomeIntervals = derive2 { name="genomeIntervals"; version="1.60.0"; sha256="1gyp2aa335gljb4igwg8c92m4rwwxwsv49dlj341gqphbx8b1vbr"; depends=[BiocGenerics GenomeInfoDb GenomicRanges intervals IRanges S4Vectors]; };
  genomes = derive2 { name="genomes"; version="3.34.0"; sha256="1qb4bpyz7z6yqz4xlrx7gq9afdpqdk0ax4aas5pzx1cqxq31yii9"; depends=[curl readr]; };
  genomicInstability = derive2 { name="genomicInstability"; version="1.10.0"; sha256="08clvnj3pfxr0y8n2bh55x7aqs8pa6kjy5w8si78r5k2ywwxxl5y"; depends=[checkmate mixtools SummarizedExperiment]; };
  gep2pep = derive2 { name="gep2pep"; version="1.24.0"; sha256="1i8m3k7l5ymx6c0d6hrl6c1yn2fjvvrrpsf08r64ksl750cvab87"; depends=[Biobase digest foreach GSEABase iterators repo rhdf5 XML]; };
  gespeR = derive2 { name="gespeR"; version="1.36.0"; sha256="1c7pimggz4px7455frmg4fjbajl9pnw1wdi480wf0hcjfakk1i9h"; depends=[Biobase biomaRt cellHTS2 doParallel dplyr foreach ggplot2 glmnet Matrix reshape2]; };
  getDEE2 = derive2 { name="getDEE2"; version="1.14.0"; sha256="1hkxyic2pjpxj5mbdf2lmkk7jm8ycmcjwychhy62qlvvcg58cd21"; depends=[htm2txt SummarizedExperiment]; };
  geva = derive2 { name="geva"; version="1.12.0"; sha256="1wbw8dqimfl6g57v9ix0c8hmyy0kkc33pwvi2ifrfsfcmr6gkv1x"; depends=[dbscan fastcluster matrixStats]; };
  gg4way = derive2 { name="gg4way"; version="1.2.0"; sha256="12hv274gsiym6ph83q3qphnl7bdh1j5af4g2hz8jvqrj1nbm34h8"; depends=[DESeq2 dplyr edgeR ggplot2 ggrepel glue janitor limma magrittr purrr rlang scales stringr tibble tidyr]; };
  ggbio = derive2 { name="ggbio"; version="1.52.0"; sha256="0g6h1h8azy79pzm0g8967f58gp33nl8866b285ybq6501nj8pb1p"; depends=[AnnotationDbi AnnotationFilter Biobase BiocGenerics Biostrings biovizBase BSgenome ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges GGally ggplot2 gridExtra gtable Hmisc IRanges OrganismDbi reshape2 rlang Rsamtools rtracklayer S4Vectors scales SummarizedExperiment VariantAnnotation]; };
  ggcyto = derive2 { name="ggcyto"; version="1.32.0"; sha256="0z4cfpylj2y3jcljzg15fpjnrhrpzgw49kcprq5sg4cxr96ia2rm"; depends=[data_table flowCore flowWorkspace ggplot2 gridExtra hexbin ncdfFlow plyr RColorBrewer rlang scales]; };
  ggkegg = derive2 { name="ggkegg"; version="1.2.0"; sha256="177hz7xfkfjzqb7v2c3jf94jqa0ckcmxb5w64jy25lci8bl1klaw"; depends=[AnnotationDbi BiocFileCache data_table dplyr GetoptLong ggplot2 ggraph gtable igraph magick org_Hs_eg_db patchwork shadowtext stringr tibble tidygraph XML]; };
  ggmanh = derive2 { name="ggmanh"; version="1.8.0"; sha256="0h7idg7s2s51gcd4fjbpad0kaq13xa5jxv34fwrw02285rl7zw7b"; depends=[gdsfmt ggplot2 ggrepel RColorBrewer rlang scales SeqArray]; };
  ggmsa = derive2 { name="ggmsa"; version="1.10.0"; sha256="0pmy9aakp503aa3d9g96ajms153kphyr0shlnap5axxy6s99s2ak"; depends=[aplot Biostrings dplyr ggalt ggforce ggplot2 ggtree magrittr R4RNA RColorBrewer seqmagick statebins tidyr]; };
  ggsc = derive2 { name="ggsc"; version="1.2.0"; sha256="1869xwlc4hqyzankrx3m7jara9am86pc8cw5lfdqfvf2ndp6ijdv"; depends=[cli dplyr ggfun ggplot2 RColorBrewer Rcpp RcppArmadillo RcppParallel rlang scales scattermore Seurat SingleCellExperiment SummarizedExperiment tibble tidydr tidyr yulab_utils]; };
  ggspavis = derive2 { name="ggspavis"; version="1.10.0"; sha256="0acbsbqnkl1xw9i3pgz1bibgzyvv52jzmyvnmggn5ag92ldd459c"; depends=[ggplot2 ggrepel ggside RColorBrewer scales SingleCellExperiment SpatialExperiment SummarizedExperiment]; };
  ggtree = derive2 { name="ggtree"; version="3.12.0"; sha256="1bm7c46k8qbajjvl8475b7fcd0dvg9s1bir8313qgm466qm6immh"; depends=[ape aplot cli dplyr ggfun ggplot2 magrittr purrr rlang scales tidyr tidytree treeio yulab_utils]; };
  ggtreeDendro = derive2 { name="ggtreeDendro"; version="1.6.0"; sha256="1p7gxcaadlvh54y5j82yqarwz6jfhlzi6k6p0zmxxi17s70202x6"; depends=[ggplot2 ggtree tidytree]; };
  ggtreeExtra = derive2 { name="ggtreeExtra"; version="1.14.0"; sha256="1wy229rnp356hi144flm9fvhv414jxmxc967f7pyqwl4abiwlmzm"; depends=[cli ggnewscale ggplot2 ggtree magrittr rlang tidytree]; };
  ggtreeSpace = derive2 { name="ggtreeSpace"; version="1.0.0"; sha256="0ny22m469mnr70ipwy6brch1g5vklk5i0qkbgbpwrsdvi6vkibsr"; depends=[ape dplyr GGally ggplot2 ggtree interp phytools rlang tibble tidyr tidyselect]; };
  ginmappeR = derive2 { name="ginmappeR"; version="1.0.0"; sha256="1xq49lsfw7zri66nxn1z8s2w9ylhl3s07lwm7vqq6xjgfwfd8jn2"; depends=[cachem httr KEGGREST memoise rentrez UniProt_ws XML]; };
  girafe = derive2 { name="girafe"; version="1.56.0"; sha256="17ma5xfqzy19cigim0bqkqvwln3qji2f5x4qwb74i40j2lbqn9qi"; depends=[Biobase BiocGenerics Biostrings genomeIntervals intervals IRanges pwalign Rsamtools S4Vectors ShortRead]; };
  glmGamPoi = derive2 { name="glmGamPoi"; version="1.16.0"; sha256="1my8v0zx5xsxjf8dj2yw92b8zp725hxhb2vrl5ccgz2w9xkn0dkj"; depends=[beachmat BiocGenerics DelayedArray DelayedMatrixStats HDF5Array MatrixGenerics matrixStats Rcpp RcppArmadillo rlang SingleCellExperiment SummarizedExperiment vctrs]; };
  glmSparseNet = derive2 { name="glmSparseNet"; version="1.22.0"; sha256="1yyl2i3f5s1l5q17471zwlj9cksbsnkv227qdlsgvzl0i9sh4m2h"; depends=[biomaRt checkmate dplyr forcats futile_logger ggplot2 glmnet glue httr lifecycle Matrix MultiAssayExperiment readr rlang SummarizedExperiment survminer TCGAutils]; };
  globalSeq = derive2 { name="globalSeq"; version="1.32.0"; sha256="0jqi2jld7s4krvk0i3rzc7m5h4rvja8zbjvdjw0ck425p180m3wb"; depends=[]; };
  globaltest = derive2 { name="globaltest"; version="5.58.0"; sha256="1cpvs1jcp9ibis06pkbqvhhksy6cis0zynx774d0hqdbb9ljl945"; depends=[annotate AnnotationDbi Biobase survival]; };
  gmapR = derive2 { name="gmapR"; version="1.46.0"; sha256="0zmn3gj5aamrkx0pa15fd2n2l7i0z8fkr4i2b9i50qgp7b46yv03"; depends=[Biobase BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges Rsamtools rtracklayer S4Vectors VariantAnnotation]; };
  gmoviz = derive2 { name="gmoviz"; version="1.16.0"; sha256="01znh8vfhqyls6f1y0zl3hnp67j4q6gzf6fjv3dx214ks6h3vk47"; depends=[BiocGenerics Biostrings circlize colorspace ComplexHeatmap GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges gridBase IRanges pracma Rsamtools rtracklayer S4Vectors]; };
  goProfiles = derive2 { name="goProfiles"; version="1.66.0"; sha256="1yj9002d99rpsqgxj4wibzmykjpl5091g1aymshkgxqcf456pq14"; depends=[AnnotationDbi Biobase CompQuadForm GO_db stringr]; };
  goSTAG = derive2 { name="goSTAG"; version="1.28.0"; sha256="195vdjaxq8xwyz5ib9csk0a1fw6l9pzkpji78l3pbh9p5clw5592"; depends=[AnnotationDbi biomaRt GO_db memoise]; };
  goSorensen = derive2 { name="goSorensen"; version="1.6.0"; sha256="1n0i9xmdxnh52lg60klblgi6bzfa910p4ajavir725p84hbqxdjh"; depends=[clusterProfiler GO_db goProfiles org_Hs_eg_db stringr]; };
  goTools = derive2 { name="goTools"; version="1.78.0"; sha256="17xpmlsy35a72mbk5c3am85ihgdbwzzaspkb2cfnww9gcnsk6is5"; depends=[AnnotationDbi GO_db]; };
  goseq = derive2 { name="goseq"; version="1.56.0"; sha256="0bc7dcpz0agbc42f8agf05amyhpavz55fdp622if5af5dn1ww6pr"; depends=[AnnotationDbi BiasedUrn BiocGenerics geneLenDataBase GO_db mgcv]; };
  gpls = derive2 { name="gpls"; version="1.76.0"; sha256="0n2m4himkdzazshiwvxybp5rr1d6jsg60lc5dbsk40grra3w2g4m"; depends=[]; };
  gpuMagic = derive2 { name="gpuMagic"; version="1.20.0"; sha256="06ga6xkk95kgnzgy95kzysz8nim9v9aq2s6742hhknjndhy59n28"; depends=[BiocGenerics Deriv DescTools digest pryr Rcpp stringr]; };
  granulator = derive2 { name="granulator"; version="1.12.0"; sha256="0757xhxn3156687nz8dksqqs0ifafrdwz0am532pw3xf5hirdz81"; depends=[cowplot dplyr dtangle e1071 epiR ggplot2 ggplotify limSolve magrittr MASS nnls pheatmap purrr rlang tibble tidyr]; };
  graper = derive2 { name="graper"; version="1.20.0"; sha256="1hczvcv3kxzbxigbcxmsiwadxbwldipsv7slmsyznrkpwws4liwi"; depends=[BH cowplot ggplot2 Matrix matrixStats Rcpp RcppArmadillo]; };
  graph = derive2 { name="graph"; version="1.82.0"; sha256="1wa10s9a8p6lajim1lbw4rxyc4fz7y6fpymrh0c0ip85971cd9hv"; depends=[BiocGenerics]; };
  graphite = derive2 { name="graphite"; version="1.50.0"; sha256="1xymgghgj4r1k9i73zqgava79l0djz945jnl5ad193flv13fpdgs"; depends=[AnnotationDbi graph httr purrr rappdirs rlang]; };
  groHMM = derive2 { name="groHMM"; version="1.38.0"; sha256="1vmck9ridjjk22477sv8wx0x7n5irrsaf6nsh9lm3krk4i3iv715"; depends=[GenomeInfoDb GenomicAlignments GenomicRanges IRanges MASS rtracklayer S4Vectors]; };
  gscreend = derive2 { name="gscreend"; version="1.18.0"; sha256="1y41rai3hhp290ga0ddcgs0jyri4aavcbyycs8z887h787sbihrn"; depends=[BiocParallel fGarch nloptr SummarizedExperiment]; };
  gsean = derive2 { name="gsean"; version="1.24.0"; sha256="14b4fg51j995af4i8lx84908jnlhw1y7j01871iy80s13d8nnz9b"; depends=[fgsea PPInfer]; };
  gtrellis = derive2 { name="gtrellis"; version="1.36.0"; sha256="1qlsjpjxcw96qhrqjlbbinpry9yagn50jc3dnz459dbfvnywr82q"; depends=[circlize GenomicRanges GetoptLong IRanges]; };
  gwascat = derive2 { name="gwascat"; version="2.36.0"; sha256="08b70drlasws3h9d8iznaxxp0qf4n1fi943m4yngy1c65h3a30rc"; depends=[AnnotationDbi AnnotationHub BiocFileCache Biostrings GenomeInfoDb GenomicFeatures GenomicRanges IRanges readr S4Vectors snpStats VariantAnnotation]; };
  gwasurvivr = derive2 { name="gwasurvivr"; version="1.22.0"; sha256="0d9a9lrdpizh0bayq5yhqrssarbk90afn9s3cbkdxjrjgvlcair7"; depends=[GWASTools matrixStats SNPRelate SummarizedExperiment survival VariantAnnotation]; };
  gypsum = derive2 { name="gypsum"; version="1.0.1"; sha256="1zrmxmlnbiifc2p5mn10y3vpmyzqjimd2hvc3s9c0j0iv6ryxjv0"; depends=[filelock httr2 jsonlite]; };
  h5vc = derive2 { name="h5vc"; version="2.38.0"; sha256="0nv6x14adjwz7izsfyirnr13k9aa5kh34nqq9p4lawxa76d0bv4p"; depends=[abind BatchJobs BiocParallel Biostrings GenomeInfoDb GenomicRanges ggplot2 gridExtra h5vcData IRanges reshape rhdf5 Rhtslib Rsamtools S4Vectors]; };
  hapFabia = derive2 { name="hapFabia"; version="1.46.0"; sha256="0vqfljpdlsdnq0ms98ar2niy5yrlmixlwvaq5ynfvsrpr8hj4wwq"; depends=[Biobase fabia]; };
  hca = derive2 { name="hca"; version="1.12.0"; sha256="143np5y93b3ik5lrjiz7hhwwp89hq8h9ygvprydwcvn6k530111r"; depends=[BiocFileCache digest dplyr DT httr jsonlite miniUI readr shiny tibble tidyr]; };
  heatmaps = derive2 { name="heatmaps"; version="1.28.0"; sha256="0295lsiicwcdsnm1annyix7na6xipmvany8qpqwi4d87i5z2imhw"; depends=[BiocGenerics Biostrings EBImage GenomeInfoDb GenomicRanges IRanges KernSmooth Matrix plotrix RColorBrewer]; };
  hermes = derive2 { name="hermes"; version="1.8.0"; sha256="0acnxrbjdmjr73y12m4k62sazixpfp01790byrybg6l76j4y2akm"; depends=[assertthat Biobase BiocGenerics biomaRt checkmate circlize ComplexHeatmap DESeq2 dplyr edgeR EnvStats forcats GenomicRanges ggfortify ggplot2 ggrepel IRanges lifecycle limma magrittr matrixStats MultiAssayExperiment purrr R6 Rdpack rlang S4Vectors SummarizedExperiment tidyr]; };
  hiAnnotator = derive2 { name="hiAnnotator"; version="1.38.0"; sha256="1mi15zpqbsf1x2bdagnd7mwspz7pdiq8v7s6a44zwxl0sas2qdmi"; depends=[BSgenome dplyr foreach GenomicRanges ggplot2 iterators rtracklayer scales]; };
  hiReadsProcessor = derive2 { name="hiReadsProcessor"; version="1.40.0"; sha256="11hiz5ymjyjmsr78060602xi07lbjsq7gs4nh0pknjph2mzx9nqi"; depends=[BiocGenerics BiocParallel Biostrings dplyr GenomicAlignments GenomicRanges hiAnnotator pwalign readxl sonicLength]; };
  hicVennDiagram = derive2 { name="hicVennDiagram"; version="1.2.0"; sha256="02ym5qiz38viddsrxmn3v6q791gwrc36hi505vcaar1fj2kblx2w"; depends=[ComplexUpset eulerr GenomeInfoDb GenomicRanges ggplot2 htmlwidgets InteractionSet IRanges reshape2 rtracklayer S4Vectors svglite]; };
  hierGWAS = derive2 { name="hierGWAS"; version="1.34.0"; sha256="140s7wvl1yl66yymq4vsiq0zb44nzjkip4x7l720lywmsj62v9zp"; depends=[fastcluster fmsb glmnet]; };
  hierinf = derive2 { name="hierinf"; version="1.22.0"; sha256="1x5piwk5y2z9nxfwnvcp60sqg9l0vi2q6rxhxr4r439c9vqgfm4w"; depends=[fmsb glmnet]; };
  hipathia = derive2 { name="hipathia"; version="3.4.0"; sha256="140ihldl1m7b249d184f717w9pycrsrx13gzjhamjvpdrn96hra4"; depends=[AnnotationHub coin DelayedArray dplyr ggplot2 ggpubr igraph limma matrixStats MetBrewer MultiAssayExperiment preprocessCore reshape2 S4Vectors servr SummarizedExperiment tibble visNetwork]; };
  hmdbQuery = derive2 { name="hmdbQuery"; version="1.24.0"; sha256="16mx6xhpxgajyglayzhgyv15m5mwggc141rkz4694l5923p3xzg8"; depends=[S4Vectors XML]; };
  hoodscanR = derive2 { name="hoodscanR"; version="1.2.0"; sha256="1dqmj5nisrndkldsa2qhy50a2bckvvyf96hcya6yqcvz6hb3w7d0"; depends=[circlize ComplexHeatmap ggplot2 knitr RANN Rcpp rlang rmarkdown scico SpatialExperiment SummarizedExperiment]; };
  hopach = derive2 { name="hopach"; version="2.64.0"; sha256="0i0p73arx8fyxq76plvpk61hpmwbmwm62ninkmx1dlbr2jzvzysx"; depends=[Biobase BiocGenerics cluster]; };
  hpar = derive2 { name="hpar"; version="1.46.0"; sha256="1qqa0p8k3h8pbbgfz9d1k08zml5i5r9iwi2xqqj1hg84n2saqkzp"; depends=[ExperimentHub]; };
  hummingbird = derive2 { name="hummingbird"; version="1.14.0"; sha256="1l8i7mhagysjxsnl4lhr31hi2v6xi4rxam5dhd24hrz8m867199p"; depends=[GenomicRanges IRanges Rcpp SummarizedExperiment]; };
  hypeR = derive2 { name="hypeR"; version="2.2.0"; sha256="0qsz1fklbwlzlm6fk1xr27gv7ynvqgpzd3s8657pv79q2f7wkljf"; depends=[BiocStyle dplyr ggforce ggplot2 htmltools httr igraph kableExtra magrittr msigdbr openxlsx purrr R6 reactable reshape2 rlang rmarkdown scales shiny stringr visNetwork]; };
  hyperdraw = derive2 { name="hyperdraw"; version="1.56.0"; sha256="104xwij9vq5gwq4ml7fnhsp4apcldbgxmhppwklg6zqdfixpmig5"; depends=[graph hypergraph Rgraphviz]; };
  hypergraph = derive2 { name="hypergraph"; version="1.76.0"; sha256="12g33rw1qy1ij32k87qrw04pak20p8z04mch9lxjy5yrj5k5x812"; depends=[graph]; };
  iASeq = derive2 { name="iASeq"; version="1.48.0"; sha256="0jaa4y13c6ra5axfw07g9pvmzybmyf3l2f6jya4cg9inqxvircv6"; depends=[]; };
  iBBiG = derive2 { name="iBBiG"; version="1.48.0"; sha256="1vysyhayxls2vpll48gskw82aizjhyqbf234j1say13kjnnn8fb3"; depends=[ade4 biclust xtable]; };
  iBMQ = derive2 { name="iBMQ"; version="1.44.0"; sha256="11i8fzf2i84x36xmq3dwndhvqgbrcj48p3ambn643r9pp27vmpdm"; depends=[Biobase ggplot2]; };
  iCARE = derive2 { name="iCARE"; version="1.32.0"; sha256="0m6cfcpviw1fxcg73zzjv1s8ynx47x2mfdpydsnkwfvc3r536xca"; depends=[gtools Hmisc plotrix]; };
  iCNV = derive2 { name="iCNV"; version="1.24.0"; sha256="08kqlpzkjd8m87n9yjdw0jmxdv7d90rh8s2rbmpywcs74qcrdq62"; depends=[CODEX data_table dplyr fields ggplot2 rlang tidyr truncnorm]; };
  iCOBRA = derive2 { name="iCOBRA"; version="1.32.0"; sha256="1m3awsz8h3gbi82an73kbxcsch2gl737zaanckl1vq2ghymqykrp"; depends=[dplyr DT ggplot2 limma markdown reshape2 rlang ROCR scales shiny shinyBS shinydashboard UpSetR]; };
  iCheck = derive2 { name="iCheck"; version="1.34.0"; sha256="1yz4f8cs8vna8rq3064md37mgidg4nzn2204zzbbpnwsx23mz1mc"; depends=[affy Biobase GeneSelectMMD gplots limma lmtest lumi MASS preprocessCore randomForest rgl scatterplot3d]; };
  iChip = derive2 { name="iChip"; version="1.58.0"; sha256="13qzd4f3iskf8g0l3d7bi22kp0mp5hpfidjvyxzi5zyx787vpaw2"; depends=[limma]; };
  iClusterPlus = derive2 { name="iClusterPlus"; version="1.40.0"; sha256="01rf4w2p1qw4hk9shsdaffyz9g91vffcn4qi1dllsrn3m8pyd1gm"; depends=[]; };
  iGC = derive2 { name="iGC"; version="1.34.0"; sha256="1xn04rv4p5aqvb4f696kfpcpyn4iqvryhgc84a8pk29yfx1hk38p"; depends=[data_table plyr]; };
  iNETgrate = derive2 { name="iNETgrate"; version="1.2.0"; sha256="1lsj5lwwfr4h1n1nlgnbncrgsy4mzhj5lzygcb691fkvk84ki09p"; depends=[BiocStyle caret GenomicRanges glmnet gplots Homo_sapiens igraph matrixStats minfi Pigengene Rfast SummarizedExperiment survival tidyr tidyselect WGCNA]; };
  iPAC = derive2 { name="iPAC"; version="1.48.0"; sha256="083lnwvc9b0w0gv21z2pcf4xvplz9alp6whv7ls1h8bgill4vc2a"; depends=[Biostrings gdata multtest pwalign scatterplot3d]; };
  iPath = derive2 { name="iPath"; version="1.10.0"; sha256="0dh57yif0wcapr54ba9ln45s9s9m52rzfgapz429i40dqbbc518v"; depends=[BiocParallel ggplot2 ggpubr matrixStats mclust Rcpp RcppArmadillo survival survminer]; };
  iSEE = derive2 { name="iSEE"; version="2.16.0"; sha256="0rkk8n0hwmbqlnmjcdcljbsqqmbgw4x5cyjl5fndvzjs6xls4fal"; depends=[BiocGenerics circlize colourpicker ComplexHeatmap DT ggplot2 ggrepel igraph listviewer mgcv rintrojs S4Vectors shiny shinyAce shinydashboard shinyjs shinyWidgets SingleCellExperiment SummarizedExperiment vipor viridisLite]; };
  iSEEde = derive2 { name="iSEEde"; version="1.2.0"; sha256="1fm7nav15kh2sn8lcgnywacsnv5z9mirv3vjvkk298141gdvnyiv"; depends=[DESeq2 edgeR iSEE S4Vectors shiny SummarizedExperiment]; };
  iSEEfier = derive2 { name="iSEEfier"; version="1.0.0"; sha256="0qg64qp2b3c5l11xa1hb8whvshv9xdi27da2j447jxa81r42xgyh"; depends=[BiocBaseUtils ggplot2 igraph iSEE iSEEu rlang SingleCellExperiment SummarizedExperiment visNetwork]; };
  iSEEhex = derive2 { name="iSEEhex"; version="1.6.0"; sha256="0lwifv4bpb8hp0y5d2fphzclf3c223x015bc7jj92kmpzl0hg41h"; depends=[ggplot2 hexbin iSEE shiny SummarizedExperiment]; };
  iSEEhub = derive2 { name="iSEEhub"; version="1.6.0"; sha256="0pwplhddy3nyszzbkjrv79kypc50pxr7jckfjdd0qy10v16314id"; depends=[AnnotationHub BiocManager DT ExperimentHub iSEE rintrojs S4Vectors shiny shinydashboard shinyjs SingleCellExperiment SummarizedExperiment]; };
  iSEEindex = derive2 { name="iSEEindex"; version="1.2.0"; sha256="0v8fww0rbldg6hdqyg9cfrsisahpwmc7q6pk156gz497av8gz250"; depends=[BiocFileCache DT iSEE paws_storage rintrojs shiny shinydashboard shinyjs SingleCellExperiment stringr SummarizedExperiment urltools]; };
  iSEEpathways = derive2 { name="iSEEpathways"; version="1.2.0"; sha256="168abrcfrrcnaz50lgkfqvap30xq63fjp61v365ar5zsh7qvys41"; depends=[ggplot2 iSEE S4Vectors shiny shinyWidgets SummarizedExperiment]; };
  iSEEu = derive2 { name="iSEEu"; version="1.16.0"; sha256="10l539zk0xha45h58j5y9sl0fmpr7vxy30n6xa54lbs3fs324jyv"; depends=[colourpicker DT ggplot2 IRanges iSEE iSEEhex S4Vectors shiny shinyAce SingleCellExperiment SummarizedExperiment]; };
  iSeq = derive2 { name="iSeq"; version="1.56.0"; sha256="1jjp852ajk37m9rp1j1c3jlng450az54dx8ayl0whjcsr2ljw7hn"; depends=[]; };
  iasva = derive2 { name="iasva"; version="1.22.0"; sha256="14p159ffi41lg56kjc2yafrxd8d0miqnavdnbspaal8l6r4qr10y"; depends=[BiocParallel cluster irlba SummarizedExperiment]; };
  ibh = derive2 { name="ibh"; version="1.52.0"; sha256="1xwcvj5zaax3z7c8nnlrmg1bj1wjrrpx5fg5zknhfkv96ycvbk5s"; depends=[simpIntLists]; };
  icetea = derive2 { name="icetea"; version="1.22.0"; sha256="0l204ak1br5xhlmp21v4qxc5fzrpg74ylaac63dvvhpkhphl51iz"; depends=[BiocGenerics BiocParallel Biostrings csaw DESeq2 edgeR GenomicAlignments GenomicFeatures GenomicRanges ggplot2 IRanges limma Rsamtools rtracklayer S4Vectors ShortRead SummarizedExperiment TxDb_Dmelanogaster_UCSC_dm6_ensGene VariantAnnotation]; };
  ideal = derive2 { name="ideal"; version="1.28.0"; sha256="1fmqawzlg7dzhb6imsq9wjb3i4qr91f6aj4n4akpkrky7djdn3p2"; depends=[AnnotationDbi base64enc BiocParallel DESeq2 dplyr DT GenomicRanges ggplot2 ggrepel GO_db goseq GOstats gplots heatmaply IHW IRanges knitr limma pcaExplorer pheatmap plotly rentrez rintrojs rlang rmarkdown S4Vectors shiny shinyAce shinyBS shinydashboard stringr SummarizedExperiment topGO UpSetR]; };
  idiogram = derive2 { name="idiogram"; version="1.80.0"; sha256="0hhgxsc4lk2lpi7ih1z72n4ly8kh8pj9j3w79x7nn0jha5krjv48"; depends=[annotate Biobase plotrix]; };
  idpr = derive2 { name="idpr"; version="1.14.0"; sha256="1g6g1265ncwlz4qz3w2v66jimx68pwmlzn8yw94pm242c2ikyn78"; depends=[Biostrings dplyr ggplot2 jsonlite magrittr plyr rlang]; };
  idr2d = derive2 { name="idr2d"; version="1.18.0"; sha256="1c1x9nazmapdk820i3k2b4b956zy5ym333y2fjxg9nqfsvq153mn"; depends=[dplyr futile_logger GenomeInfoDb GenomicRanges ggplot2 idr IRanges magrittr reticulate scales stringr]; };
  igvR = derive2 { name="igvR"; version="1.24.0"; sha256="0rkps3zj1zg8rksyrnp94xvasgrlvwnq4fqgkrhr8wn0jcqkpna1"; depends=[BiocGenerics BrowserViz GenomicAlignments GenomicRanges httpuv httr RColorBrewer rtracklayer VariantAnnotation]; };
  igvShiny = derive2 { name="igvShiny"; version="1.0.0"; sha256="0nb8cals6nw5l70yrnwq1pcfdc3m0w9ncsrdrd2zsm4ni2lpqjvx"; depends=[BiocGenerics checkmate futile_logger GenomeInfoDbData GenomicRanges htmlwidgets httr jsonlite randomcoloR RCurl shiny]; };
  illuminaio = derive2 { name="illuminaio"; version="0.46.0"; sha256="0l3n1plz5nvday0a1bm8173mikpfjbzrb1bp8yfvafy7lav4dsyv"; depends=[base64]; };
  imcRtools = derive2 { name="imcRtools"; version="1.10.0"; sha256="0wp5f0lrxi2f7kvdqqjl6gdhybcipppg3mr25r9zsfbaxf5d0160"; depends=[abind BiocNeighbors BiocParallel concaveman cytomapper data_table distances dplyr DT EBImage ggplot2 ggraph igraph magrittr MatrixGenerics pheatmap readr rlang RTriangle S4Vectors scuttle sf SingleCellExperiment SpatialExperiment stringr SummarizedExperiment tidygraph tidyselect viridis vroom]; };
  immunoClust = derive2 { name="immunoClust"; version="1.36.0"; sha256="00bshq0plfnh20117q9020gsyr65z1sfvmki8nbcz3ay6hq3rpm3"; depends=[flowCore lattice]; };
  immunotation = derive2 { name="immunotation"; version="1.12.0"; sha256="0g9yfm8kbcbfmb0xf1sqqv15h4ji0hya7p8j3czr2bc0gvmmka6q"; depends=[curl ggplot2 maps ontologyIndex readr rlang rvest stringr tidyr xml2]; };
  impute = derive2 { name="impute"; version="1.78.0"; sha256="1g0m9298srkhjnq3mc5rd7krr9y3cy74yvg9k0j7ypc9nmgcqabr"; depends=[]; };
  infercnv = derive2 { name="infercnv"; version="1.20.0"; sha256="1fi89fqzzb9n2c9jchkkgy3yq2fvisjcdavh9r455vmy0xqsyyyd"; depends=[ape argparse BiocGenerics caTools coda coin digest doParallel dplyr edgeR fastcluster fitdistrplus foreach futile_logger future ggplot2 gplots gridExtra HiddenMarkov igraph Matrix parallelDist phyclust RANN RColorBrewer reshape2 rjags Seurat SingleCellExperiment SummarizedExperiment tidyr]; };
  infinityFlow = derive2 { name="infinityFlow"; version="1.14.0"; sha256="112pnwg13wq9cw0lyl170pfby2kaaz2nm22gfwclf7hccnd9a46z"; depends=[Biobase flowCore generics gtools matlab pbapply png raster uwot xgboost]; };
  intansv = derive2 { name="intansv"; version="1.44.0"; sha256="1njvcyk4gdk2bxvs6zbz7dypcbmfismxpv8afxn02i2lz3ykdyzd"; depends=[BiocGenerics GenomicRanges ggbio IRanges plyr]; };
  interacCircos = derive2 { name="interacCircos"; version="1.14.0"; sha256="084136v9ghzgqgqv3k523416q2wl4qb6ix862fagjgwmkzdmr5s8"; depends=[htmlwidgets plyr RColorBrewer]; };
  interactiveDisplay = derive2 { name="interactiveDisplay"; version="1.42.0"; sha256="14k1j8bmpbrldx61fbvn20f7l2lc50bj9iy01a5jf0ddcbi27x5g"; depends=[AnnotationDbi BiocGenerics Category ggplot2 gridSVG interactiveDisplayBase plyr RColorBrewer reshape2 shiny XML]; };
  interactiveDisplayBase = derive2 { name="interactiveDisplayBase"; version="1.42.0"; sha256="0ih9b6n81gr84vhmwcq49knrbmkwbh50gy5hrap654nicb3j3jzb"; depends=[BiocGenerics DT shiny]; };
  ipdDb = derive2 { name="ipdDb"; version="1.22.0"; sha256="10pk87w4yd6kgsbg79ci6csmk3izpxc8kwhn5f0jywmjdci7k3nq"; depends=[AnnotationDbi AnnotationHub assertthat Biostrings DBI GenomicRanges IRanges RSQLite]; };
  isobar = derive2 { name="isobar"; version="1.50.0"; sha256="0vqiw5bwk4mivj8b1a96qglqsmsfi4p6vd40x0rxafifb46i83h3"; depends=[Biobase biomaRt distr ggplot2 plyr]; };
  isomiRs = derive2 { name="isomiRs"; version="1.32.1"; sha256="020ij0byr9pnzxp083yyjscn3iwv7yq7v2zsdalqs4bzn6z7mzq8"; depends=[AnnotationDbi Biobase BiocGenerics broom cluster cowplot DEGreport DESeq2 dplyr GenomicRanges GGally ggplot2 gplots gridExtra gtools IRanges limma RColorBrewer readr reshape rlang S4Vectors stringr SummarizedExperiment tibble tidyr]; };
  iterativeBMA = derive2 { name="iterativeBMA"; version="1.62.0"; sha256="1h2nz7pfagd4ncm64b7zfqawp3gd88kvz8920wmk5s732490x522"; depends=[Biobase BMA leaps]; };
  iterativeBMAsurv = derive2 { name="iterativeBMAsurv"; version="1.62.0"; sha256="1g0bg1cbk95pg1zf1xqk5dxii3cwfkwzx5ys1mzzab6b9i740las"; depends=[BMA leaps survival]; };
  ivygapSE = derive2 { name="ivygapSE"; version="1.26.0"; sha256="00i91a1r3xk7czcv5f7kxppgzjsvalxmzwyqj6mg5m3z4l77m17n"; depends=[ggplot2 hwriter plotly S4Vectors shiny SummarizedExperiment survival survminer UpSetR]; };
  karyoploteR = derive2 { name="karyoploteR"; version="1.30.0"; sha256="1g4pms5dcr4cdb47gr9kw3mc06v890b38zrsapd4x1cqhgfbgjyg"; depends=[AnnotationDbi bamsignals bezier biovizBase digest GenomeInfoDb GenomicFeatures GenomicRanges IRanges memoise regioneR Rsamtools rtracklayer S4Vectors VariantAnnotation]; };
  katdetectr = derive2 { name="katdetectr"; version="1.6.0"; sha256="1hc3795f26cz1xml01zac83gmam15pvxd0pl2i9q4mardnkj9w7s"; depends=[Biobase BiocParallel BSgenome BSgenome_Hsapiens_UCSC_hg19 BSgenome_Hsapiens_UCSC_hg38 changepoint changepoint_np checkmate dplyr GenomeInfoDb GenomicRanges ggplot2 ggtext IRanges maftools plyranges Rdpack rlang S4Vectors scales tibble tidyr VariantAnnotation]; };
  kebabs = derive2 { name="kebabs"; version="1.38.0"; sha256="0v4sgxvyhi3lzr3jw82w00ffdg0w55vi78ia9i805kqy77sq0677"; depends=[apcluster Biostrings e1071 IRanges kernlab LiblineaR Matrix Rcpp S4Vectors XVector]; };
  keggorthology = derive2 { name="keggorthology"; version="2.56.0"; sha256="14sywfqfwbi3xanc202d07hb9yzahd94xqg9mx9djgin5b4islz3"; depends=[AnnotationDbi DBI graph hgu95av2_db]; };
  kissDE = derive2 { name="kissDE"; version="1.24.0"; sha256="1700shil37hsij9h4q3zr2cq3wav9bpbm74d7spbyv0l1fnl8fx9"; depends=[ade4 aods3 Biobase DESeq2 doParallel DSS DT factoextra foreach ggplot2 gplots matrixStats shiny shinycssloaders]; };
  knowYourCG = derive2 { name="knowYourCG"; version="1.0.0"; sha256="1nxg81p67d66bzy2fw6dsj02zh33pas02rai1prpsyjs7699bcqf"; depends=[dplyr GenomicRanges IRanges reshape2 rlang S4Vectors sesameData stringr]; };
  lapmix = derive2 { name="lapmix"; version="1.70.0"; sha256="1s2f28v21yjxi8rx08cdhd8g76wxm9wq48lq0c6kd7w4iklwwxd1"; depends=[Biobase]; };
  ldblock = derive2 { name="ldblock"; version="1.34.0"; sha256="1l4l35bpz4j1iliy9dj09qq8r4nimd9pcm0gm4g3sb4325z6cd5h"; depends=[BiocGenerics httr Matrix rlang]; };
  lefser = derive2 { name="lefser"; version="1.14.0"; sha256="1qi4q3vijys4q1gfnflvvz8ws3j6f65rpprpgmrkqgiwfn7dvi6g"; depends=[coin dplyr ggplot2 MASS S4Vectors SummarizedExperiment]; };
  lemur = derive2 { name="lemur"; version="1.2.0"; sha256="1hwnf8x9prqv96j66i5756510jviibbrchyizalhrlg8f427i5my"; depends=[BiocGenerics BiocNeighbors DelayedMatrixStats glmGamPoi harmony HDF5Array irlba limma Matrix MatrixGenerics matrixStats Rcpp RcppArmadillo rlang S4Vectors SingleCellExperiment SummarizedExperiment vctrs]; };
  les = derive2 { name="les"; version="1.54.0"; sha256="1dsdrdv06ab7rxpvmbgq1b6dhajjaw7zgvi9nshadm5gg28i60x3"; depends=[boot fdrtool gplots RColorBrewer]; };
  levi = derive2 { name="levi"; version="1.22.0"; sha256="0rknsfa5fbr4smxzj4p589sxxbypb2s1wvn33p9qj69mfcx7rmi3"; depends=[colorspace dplyr DT ggplot2 httr igraph knitr RColorBrewer Rcpp reshape2 rmarkdown shiny shinydashboard shinyjs testthat xml2]; };
  lfa = derive2 { name="lfa"; version="2.4.0"; sha256="1sbgr6h2kpfpzw3fkqd1075wrmbblb97pdywmvl8xv52vg0wqxz3"; depends=[corpcor RSpectra]; };
  limma = derive2 { name="limma"; version="3.60.2"; sha256="154fsg8vnks38f9phlbf15cpsf84p2gwygqgq4ayddfpxczzl159"; depends=[statmod]; };
  limmaGUI = derive2 { name="limmaGUI"; version="1.80.0"; sha256="12ryq8l3jkxi5znzhb9bqp53sba7rk2fszsxp1dkwmyrdl12l4ns"; depends=[limma R2HTML tkrplot xtable]; };
  limpca = derive2 { name="limpca"; version="1.0.0"; sha256="1id38g2s7g0shcqz37i03zhhypilny8z2dwf74anj8yj4d1isdfr"; depends=[doParallel dplyr ggplot2 ggrepel ggsci plyr reshape2 S4Vectors stringr SummarizedExperiment tibble tidyr tidyverse]; };
  lineagespot = derive2 { name="lineagespot"; version="1.8.0"; sha256="0rjf4liq6lr6i3b2a0cn22qc1xisscsvn7zi11vq8wq0ym15pj6c"; depends=[data_table httr MatrixGenerics stringr SummarizedExperiment VariantAnnotation]; };
  lionessR = derive2 { name="lionessR"; version="1.18.0"; sha256="1rv9daa45if6nm3yh1sbpnywmdpdi0kmga25pwzfjwv26f9kyd6q"; depends=[S4Vectors SummarizedExperiment]; };
  lipidr = derive2 { name="lipidr"; version="2.18.0"; sha256="037xy9ci3h0913df5iy5xnciz26zr9frqfpk8krbx7qfzk4d0rk2"; depends=[data_table dplyr fgsea forcats ggplot2 imputeLCMD limma magrittr rlang ropls S4Vectors SummarizedExperiment tidyr]; };
  lisaClust = derive2 { name="lisaClust"; version="1.12.1"; sha256="1yagv5c398kk95c8gyny7ldhh7mpf1yrqp65ijk0xgx5xpl3kcfd"; depends=[BiocGenerics BiocParallel class concaveman data_table dplyr ggplot2 pheatmap purrr S4Vectors SingleCellExperiment SpatialExperiment spatstat_explore spatstat_geom spatstat_random spicyR SummarizedExperiment tidyr]; };
  lmdme = derive2 { name="lmdme"; version="1.46.0"; sha256="19rplb4ik9jpxqghmglqhv42plbgz01i4pdw7pr063cdc2n3n18g"; depends=[limma pls stemHypoxia]; };
  loci2path = derive2 { name="loci2path"; version="1.24.0"; sha256="0igamscdyblh7ymj62qimwr48qfvpqld4ami0m3bnlzkkds6xm2n"; depends=[BiocParallel data_table GenomicRanges pheatmap RColorBrewer S4Vectors wordcloud]; };
  logicFS = derive2 { name="logicFS"; version="2.24.0"; sha256="1dbc8zwgixjjcdhy3fgln08c0kycrzbcd46vqjb4l479pdrj2r0l"; depends=[LogicReg mcbiopi survival]; };
  lpNet = derive2 { name="lpNet"; version="2.36.0"; sha256="14b7d942k15bjadakfvac8s9zhdhqw59pvpmal527rwm5z6avfvl"; depends=[KEGGgraph lpSolve]; };
  lpsymphony = derive2 { name="lpsymphony"; version="1.32.0"; sha256="1wcjmw655k389ph61v3gxjv7gk2q70h25zmdzvd4ggbxg8vh2mp1"; depends=[]; };
  lumi = derive2 { name="lumi"; version="2.56.0"; sha256="04r7dw00yvjrxs0h6mwh79lwp55f5v8s4pgmzcy2fnpb2cdslpzy"; depends=[affy annotate AnnotationDbi Biobase DBI GenomicFeatures GenomicRanges KernSmooth lattice MASS methylumi mgcv nleqslv preprocessCore RSQLite]; };
  lute = derive2 { name="lute"; version="1.0.0"; sha256="02hqwxmqld3fkvs7c7l8hz39wksxgbcnckgvkzgpaknsb2fdmml0"; depends=[Biobase BiocGenerics dplyr ggplot2 S4Vectors scran SingleCellExperiment SummarizedExperiment]; };
  m6Aboost = derive2 { name="m6Aboost"; version="1.10.0"; sha256="141jrx1ngwb70pl769ablzvxcd4f4dfgzi0jdsmqgmhb3kb3qvg2"; depends=[adabag Biostrings BSgenome dplyr ExperimentHub GenomicRanges IRanges rtracklayer S4Vectors]; };
  mBPCR = derive2 { name="mBPCR"; version="1.58.0"; sha256="182qbhzpj5h0qcyiph0k38bvlspc8i7g3bg27vkak5p8685hwrk8"; depends=[Biobase GWASTools oligoClasses]; };
  mCSEA = derive2 { name="mCSEA"; version="1.24.0"; sha256="11mx1250kvdmkriznzp0a05jvf9paizj7qsgq7wzlvgz9f6nfwyw"; depends=[biomaRt fgsea GenomicFeatures GenomicRanges ggplot2 Gviz Homo_sapiens IRanges limma mCSEAdata S4Vectors SummarizedExperiment]; };
  maCorrPlot = derive2 { name="maCorrPlot"; version="1.74.0"; sha256="0z4ilr1r9231f3h2zq6ac2spd3dcaa4j48hkih7nrqrgr9x1127d"; depends=[lattice]; };
  maPredictDSC = derive2 { name="maPredictDSC"; version="1.42.0"; sha256="015zp1ijl4sjqvrnaf0fzwzynvwjgphxba4q29m821hyvq1rjmx4"; depends=[affy AnnotationDbi caret class e1071 gcrma hgu133plus2_db limma LungCancerACvsSCCGEO MASS ROC ROCR]; };
  maSigPro = derive2 { name="maSigPro"; version="1.76.0"; sha256="1kb5xjg84jbri3ds5kvr30nypg2picz483nwwjamk8px6d3anmry"; depends=[Biobase MASS mclust venn]; };
  made4 = derive2 { name="made4"; version="1.78.0"; sha256="0x96lhkz0fwp3qis8k2lllmi520b887bz26jcq3zlk1kjhbg91a8"; depends=[ade4 Biobase gplots RColorBrewer scatterplot3d SummarizedExperiment]; };
  maftools = derive2 { name="maftools"; version="2.20.0"; sha256="0c2sf8l1wfgz3nh9ccm10y9wwh7rv55r09awavqlrr9glcbblp32"; depends=[data_table DNAcopy RColorBrewer Rhtslib survival zlibbioc]; };
  magpie = derive2 { name="magpie"; version="1.4.0"; sha256="1m5xnbcyhglkg843fhfvynlinag8vv8sxg1ghzpwi0q9ki65kq9d"; depends=[AnnotationDbi aod BiocParallel DESeq2 GenomicFeatures GenomicRanges IRanges Matrix matrixStats openxlsx RColorBrewer reshape2 Rsamtools rtracklayer S4Vectors TRESS]; };
  magrene = derive2 { name="magrene"; version="1.6.0"; sha256="1nqklrz4l2g062ipff6znzl9lm4ws69qplrdb0r5fsfahpb8s25z"; depends=[BiocParallel]; };
  makecdfenv = derive2 { name="makecdfenv"; version="1.80.0"; sha256="0c1ks5f2rc0mwbfji6iicvypbmm46mq8yckmdpwiyp22l7l05aqz"; depends=[affy affyio Biobase zlibbioc]; };
  mapscape = derive2 { name="mapscape"; version="1.28.0"; sha256="1xg3nm9r115fzykq8m31xcr7anaqyqm91qnsmib89zvf0hfgrlac"; depends=[base64enc htmlwidgets jsonlite stringr]; };
  mariner = derive2 { name="mariner"; version="1.4.0"; sha256="1ndinmzzzpy154jmndnqf5xj3wz35jjijszg88ga4j19w2cxmnfp"; depends=[abind assertthat BiocGenerics BiocManager BiocParallel colourvalues data_table dbscan DelayedArray GenomeInfoDb GenomicRanges glue HDF5Array InteractionSet IRanges magrittr plotgardener plyranges progress purrr RColorBrewer rhdf5 rlang S4Vectors strawr SummarizedExperiment]; };
  marr = derive2 { name="marr"; version="1.14.0"; sha256="1670fr6fcclrhgz6aqg0ph9iln0vjq3zgyp215na07ngwrzjw5nb"; depends=[dplyr ggplot2 magrittr Rcpp rlang S4Vectors SummarizedExperiment]; };
  marray = derive2 { name="marray"; version="1.82.0"; sha256="1h96aq92bad69ycrmrvxwdz8dg9rk44925gj83gxzqypw88j2x0y"; depends=[limma]; };
  martini = derive2 { name="martini"; version="1.24.0"; sha256="07d1cyj2ms8mnglqzqs45gz32pdsqkfac00a118fahs1rw8j408f"; depends=[igraph Matrix memoise Rcpp RcppEigen snpStats]; };
  maser = derive2 { name="maser"; version="1.22.0"; sha256="0w62dl65ysgcwixgmmb70qp6f85vhfnqjsww5snkjd48ypwx65ca"; depends=[BiocGenerics data_table dplyr DT GenomeInfoDb GenomicRanges ggplot2 Gviz IRanges reshape2 rtracklayer]; };
  maskBAD = derive2 { name="maskBAD"; version="1.48.0"; sha256="198637aq9pjwx2p22iyy1nzy76pys2cmvfpdrghslh10l1b5pdjl"; depends=[affy gcrma]; };
  massiR = derive2 { name="massiR"; version="1.40.0"; sha256="169gpddm1q3brj49sm3sp4ifyby37i41ydxjizwpa9aml90zc0y8"; depends=[Biobase cluster diptest gplots]; };
  mastR = derive2 { name="mastR"; version="1.4.0"; sha256="1717hyil3x4c6jqv4zv6fwppwq1lc74kd8hg8z8yj8qqp92093f8"; depends=[AnnotationDbi Biobase dplyr edgeR ggplot2 ggpubr GSEABase limma Matrix msigdb org_Hs_eg_db patchwork SeuratObject SingleCellExperiment SummarizedExperiment tidyr]; };
  matchBox = derive2 { name="matchBox"; version="1.46.0"; sha256="015gdqbwdl02mwr7hcymdkz8pvbxjh4qv4agswh3d8qd3mmj04y6"; depends=[]; };
  matter = derive2 { name="matter"; version="2.6.2"; sha256="06ql73amrl5zy3ldm4ni3vwv65j1v9fy5s7a2pvwi31w4nwdly6h"; depends=[biglm BiocGenerics BiocParallel digest irlba Matrix ProtGenerics]; };
  mbQTL = derive2 { name="mbQTL"; version="1.4.0"; sha256="04ml4rv1hngr8lm9z9pcg7szb1cmla1m1vypwjk9bkkfy879ribf"; depends=[broom dplyr ggplot2 MatrixEQTL metagenomeSeq pheatmap readxl stringr tidyr]; };
  mbkmeans = derive2 { name="mbkmeans"; version="1.20.0"; sha256="0fnf6ymbcfchhlcbwpwlcq1jc3lfzh9f8mf76xfy7vrpwngds1fs"; depends=[beachmat benchmarkme BiocParallel ClusterR DelayedArray Matrix Rcpp RcppArmadillo Rhdf5lib S4Vectors SingleCellExperiment SummarizedExperiment]; };
  mdp = derive2 { name="mdp"; version="1.24.0"; sha256="08x2ghj5a91rdqq48xjsq4m22qk2ys92jhb6flaqzqgm1s6806lw"; depends=[ggplot2 gridExtra]; };
  mdqc = derive2 { name="mdqc"; version="1.66.0"; sha256="1frn6s43j6sbwnb5h2hykccvi7cwbasp8l37rc3nkxpc6szvsby6"; depends=[cluster MASS]; };
  megadepth = derive2 { name="megadepth"; version="1.14.0"; sha256="0394x1x81hgibvqb1dbrm8h3y72xfv9xi9fgqghjgnrw6farrkdk"; depends=[cmdfun dplyr fs GenomicRanges magrittr readr xfun]; };
  memes = derive2 { name="memes"; version="1.12.0"; sha256="03hrhydlgk57z9hzmwdgihlhsjyhhzw5vb5ql07ks169z15nix4h"; depends=[Biostrings cmdfun dplyr GenomicRanges ggplot2 ggseqlogo magrittr matrixStats patchwork processx purrr readr rlang tibble tidyr universalmotif usethis xml2]; };
  meshes = derive2 { name="meshes"; version="1.30.0"; sha256="0yc1drx7rbaxasj9p05hn4wa1nz0frymv7i9aw55ma59jjik8gi6"; depends=[AnnotationDbi AnnotationHub DOSE enrichplot GOSemSim MeSHDbi yulab_utils]; };
  meshr = derive2 { name="meshr"; version="2.10.0"; sha256="1cbxlypw937bafmzlz8v0g1bf16pmlqdc1jkisj8zmaj9xabbik9"; depends=[BiocGenerics BiocStyle Category fdrtool knitr markdown MeSHDbi rmarkdown RSQLite S4Vectors]; };
  messina = derive2 { name="messina"; version="1.40.0"; sha256="0xcc5y4zqz0hn7bm0lgyb8dlnhhq5nz1pghq53lvdmgr5zcp8yqz"; depends=[foreach ggplot2 plyr Rcpp survival]; };
  metaCCA = derive2 { name="metaCCA"; version="1.32.0"; sha256="1m35p9r3v2qzk3y1046p1n1j84rw6a1hsfsij58p4byi34hrfc1a"; depends=[]; };
  metaMS = derive2 { name="metaMS"; version="1.40.0"; sha256="0fj111vs9s1j754jhqzna89jnibiff6pahbn1vibh7gsx310ri0s"; depends=[BiocGenerics CAMERA Matrix robustbase xcms]; };
  metaSeq = derive2 { name="metaSeq"; version="1.44.0"; sha256="0n5s8kssvawcdi7sqhgpbrdwi39j22clgprcj9psd8i6g2n7iwc8"; depends=[NOISeq Rcpp snow]; };
  metabCombiner = derive2 { name="metabCombiner"; version="1.14.0"; sha256="0jp39qz7z3v7ndnxhc4lsjwf1mfhjq5nsg926s1x1i7w5x203fzd"; depends=[caret dplyr matrixStats mgcv rlang S4Vectors tidyr]; };
  metabinR = derive2 { name="metabinR"; version="1.6.0"; sha256="158lwd9l5yszlh28zsfn2ddmq6p8hlknvzy8k1spxmqdddqhp9zy"; depends=[rJava]; };
  metabolomicsWorkbenchR = derive2 { name="metabolomicsWorkbenchR"; version="1.14.0"; sha256="0rsrla3gyh0fpx49kg0p5c02nskcl5rv7xmdnbgxk5d1kbzdsrcr"; depends=[data_table httr jsonlite MultiAssayExperiment struct SummarizedExperiment]; };
  metabomxtr = derive2 { name="metabomxtr"; version="1.38.0"; sha256="1jfhz28q4bxib3k2wvdcqsrqj699bxy0lzqqi7m0xivrjp27jw9h"; depends=[Biobase BiocParallel Formula ggplot2 multtest optimx plyr]; };
  metagene2 = derive2 { name="metagene2"; version="1.20.0"; sha256="1j5jl0xczj2g03k0lwq9h5snv4kpwqga836dkshnmf789gn2pzy3"; depends=[BiocParallel data_table dplyr GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges magrittr purrr R6 reshape2 Rsamtools rtracklayer]; };
  metagenomeSeq = derive2 { name="metagenomeSeq"; version="1.46.0"; sha256="0bjbiwbgs0lv0j6gjv5rhqhmqk0p7f80lfig4n24i4bqwkd2j26k"; depends=[Biobase foreach glmnet gplots limma Matrix matrixStats RColorBrewer Wrench]; };
  metahdep = derive2 { name="metahdep"; version="1.62.0"; sha256="1h888yl95xnr07ybz5hrfpslcc7xh0nggnl57lcw8ikqj8wgcnc2"; depends=[]; };
  metapod = derive2 { name="metapod"; version="1.12.0"; sha256="100wsg2y7069r7xk5bsk5n4n8dqvpbk297w5ishnijrvxhbs9f8n"; depends=[Rcpp]; };
  metapone = derive2 { name="metapone"; version="1.10.0"; sha256="0x5lrpf5554h2i521ikxgadpwj4233ib4n5p9qpass7y3z0kpxh7"; depends=[BiocParallel fdrtool fgsea fields ggplot2 ggrepel markdown]; };
  metaseqR2 = derive2 { name="metaseqR2"; version="1.16.0"; sha256="1rkaacb0jkfzhdd7q7v38by7wwmk4m4kfa01ky8yn2fady0sx3hm"; depends=[ABSSeq Biobase BiocGenerics BiocParallel biomaRt Biostrings corrplot DESeq2 DSS DT EDASeq edgeR genefilter GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges gplots harmonicmeanp heatmaply htmltools httr IRanges jsonlite lattice limma locfit log4r magrittr MASS Matrix NBPSeq pander qvalue rmarkdown rmdformats Rsamtools RSQLite rtracklayer S4Vectors stringr SummarizedExperiment survcomp txdbmaker VennDiagram vsn yaml zoo]; };
  methInheritSim = derive2 { name="methInheritSim"; version="1.26.0"; sha256="0c94sbqa0aiskrl8rxyiyj38a5n4vw1l2b51c2v0ryvjqk0zg93n"; depends=[BiocGenerics GenomeInfoDb GenomicRanges IRanges methylKit msm S4Vectors]; };
  methimpute = derive2 { name="methimpute"; version="1.26.0"; sha256="1k9nasdfvrynvk2jsvxpbbp9zdqh516c41m654yfsdi5cl2y3jyd"; depends=[Biostrings data_table GenomeInfoDb GenomicRanges ggplot2 IRanges minpack_lm Rcpp reshape2]; };
  methodical = derive2 { name="methodical"; version="1.0.0"; sha256="13m75hf5dq36l20idp9alcikhhqa2qy5jwfnpkv2yp1ra6c9pq7j"; depends=[BiocParallel Biostrings BSgenome cowplot data_table DelayedArray dplyr ExperimentHub foreach GenomeInfoDb GenomicRanges ggplot2 HDF5Array IRanges R_utils RcppRoll rhdf5 rtracklayer S4Vectors scales SummarizedExperiment tibble tidyr]; };
  methrix = derive2 { name="methrix"; version="1.18.0"; sha256="0976y3aswyv7dk60ix9vvcvd6dgc0sy8qnakq3pdrl505znxsshi"; depends=[BSgenome data_table DelayedArray DelayedMatrixStats GenomicRanges ggplot2 HDF5Array IRanges matrixStats rtracklayer S4Vectors SummarizedExperiment]; };
  methyLImp2 = derive2 { name="methyLImp2"; version="1.0.0"; sha256="1f86951l7gjqj48hxdm6ppc7bp84dm9fnlh0xhhl12fbdp2id94m"; depends=[BiocParallel ChAMPdata corpcor SummarizedExperiment]; };
  methylCC = derive2 { name="methylCC"; version="1.18.0"; sha256="16i4yjx36pdbxf9vqnnr568lqcnql1pw3f5f1hlnq66kaai9hx34"; depends=[Biobase bsseq bumphunter dplyr FlowSorted_Blood_450k genefilter GenomicRanges IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest IRanges magrittr minfi plyranges quadprog S4Vectors]; };
  methylGSA = derive2 { name="methylGSA"; version="1.22.0"; sha256="0myii2c782my1lmqziaxdlrsfxgh194n58m1ydaqbxnhgkwvh10s"; depends=[AnnotationDbi BiocParallel clusterProfiler ggplot2 GO_db IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylationEPICanno_ilm10b4_hg19 missMethyl org_Hs_eg_db reactome_db RobustRankAggreg shiny stringr]; };
  methylInheritance = derive2 { name="methylInheritance"; version="1.28.0"; sha256="1pqd9ydgm071pa5lld1mn39yymkaghzx931ghlkshhh9dsrjqhg4"; depends=[BiocParallel GenomicRanges ggplot2 gridExtra IRanges methylKit rebus S4Vectors]; };
  methylKit = derive2 { name="methylKit"; version="1.30.0"; sha256="000dvi63cjikjbq3q83hlspd7y62rpswzg6hs5z1z1pj6a8rifdj"; depends=[data_table emdbook fastseg GenomeInfoDb GenomicRanges gtools IRanges KernSmooth limma mclust mgcv qvalue R_utils Rcpp Rhtslib Rsamtools rtracklayer S4Vectors zlibbioc]; };
  methylMnM = derive2 { name="methylMnM"; version="1.42.0"; sha256="0f1mc3v1zr55irlqfxkp7s7cv2c1crwr60hj4ff1ld14ds91q9pr"; depends=[edgeR statmod]; };
  methylPipe = derive2 { name="methylPipe"; version="1.38.0"; sha256="1v2qp5rp19d80aai8i5y32b62kynkkdkp3hqfvsk82ckwxvk2k60"; depends=[BiocGenerics Biostrings data_table GenomeInfoDb GenomicAlignments GenomicRanges gplots Gviz IRanges marray Rsamtools S4Vectors SummarizedExperiment]; };
  methylSig = derive2 { name="methylSig"; version="1.16.0"; sha256="03ghyx1xj2d06fj5kckrw810x92s8ndsq3wpj1kcjkf1v22vr0ln"; depends=[bsseq DelayedArray DelayedMatrixStats DSS GenomeInfoDb GenomicRanges IRanges S4Vectors]; };
  methylclock = derive2 { name="methylclock"; version="1.10.0"; sha256="193ck7a501804424yqvg2c8zixzj56p3d8468sdisx577hhshhhm"; depends=[Biobase devtools dplyr dynamicTreeCut ExperimentHub ggplot2 ggpmisc ggpubr gridExtra impute methylclockData minfi PerformanceAnalytics planet preprocessCore quadprog Rcpp RPMM tibble tidyr tidyverse]; };
  methylscaper = derive2 { name="methylscaper"; version="1.12.0"; sha256="19xpagmx9rn840acbm2cj3vkvhjzr1rslsjmjgvgcm4fip1yrskp"; depends=[BiocParallel Biostrings data_table pwalign Rfast seqinr seriation shiny shinyFiles shinyjs SummarizedExperiment]; };
  methylumi = derive2 { name="methylumi"; version="2.50.0"; sha256="1ms3w43yvy810mr6dml9hqp3kw5jlpr9153kd62gvhjsgikaj3ja"; depends=[annotate AnnotationDbi Biobase BiocGenerics FDb_InfiniumMethylation_hg19 genefilter GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 illuminaio IRanges lattice matrixStats minfi reshape2 S4Vectors scales SummarizedExperiment]; };
  mfa = derive2 { name="mfa"; version="1.26.0"; sha256="1vqmpxsl9dfq0h9cirip578crfnqxpabbwpzlglcm0qqwymh6ilr"; depends=[Biobase coda dplyr ggmcmc ggplot2 magrittr MCMCglmm MCMCpack Rcpp tibble]; };
  mgsa = derive2 { name="mgsa"; version="1.52.0"; sha256="00404pglk2f7hq8pfb3i8zigwzal74m0kk39by2rigyigdcq4sq9"; depends=[gplots]; };
  miQC = derive2 { name="miQC"; version="1.12.0"; sha256="04f7jza631y04mhy23yvipd88rywgpqw5jm9ff54hhfhmscdaczn"; depends=[flexmix ggplot2 SingleCellExperiment]; };
  miRLAB = derive2 { name="miRLAB"; version="1.34.0"; sha256="1r18s6d94csqqbkjis5dh5q4rbw1qvj61x8wmzw7jgyvrsyd5jqc"; depends=[Category ctc dplyr energy entropy glmnet GOstats gplots Hmisc httr impute InvariantCausalPrediction limma org_Hs_eg_db pcalg RCurl stringr SummarizedExperiment TCGAbiolinks]; };
  miRNAmeConverter = derive2 { name="miRNAmeConverter"; version="1.32.0"; sha256="0sqar3llyj10kmix9vb870nra5n735m9897qyf0zic9n21gmmbsp"; depends=[AnnotationDbi DBI miRBaseVersions_db reshape2]; };
  miRNApath = derive2 { name="miRNApath"; version="1.64.0"; sha256="0zhgh9qls59kn6gd977gawvwh0pqdwwasla1gbvbiakhw3i1jw9r"; depends=[]; };
  miRNAtap = derive2 { name="miRNAtap"; version="1.38.0"; sha256="07sff3h9hidw5xr11fx6n4ngajvsvbz4a1gkavd32wh6j8jccpyx"; depends=[AnnotationDbi DBI plyr RSQLite sqldf stringr]; };
  miRSM = derive2 { name="miRSM"; version="2.0.0"; sha256="0wxwz00fsv8jf291zlfjim89vhsbqwlc9klq0szzl1p7msrs7vga"; depends=[BiBitR BicARE biclust Biobase clusterProfiler dbscan DOSE dynamicTreeCut energy fabia flashClust GFA GSEABase iBBiG igraph isa2 linkcomm MatrixCorrelation MCL mclust NMF org_Hs_eg_db PMA ppclust Rcpp ReactomePA rqubic s4vd SOMbrero subspace SummarizedExperiment WGCNA]; };
  miRcomp = derive2 { name="miRcomp"; version="1.34.0"; sha256="1gm8s0mprb5ybc1hb92w1z84qrj4vzfizd0ws4ppzj9k6fb12nn9"; depends=[Biobase KernSmooth miRcompData]; };
  mia = derive2 { name="mia"; version="1.12.0"; sha256="1wn2lb7hn4zqqcs2jwavpsbk5kw8d78kxg2yv4jjpikpdz7haa2i"; depends=[ape BiocGenerics BiocParallel Biostrings bluster DECIPHER decontam DelayedArray DelayedMatrixStats DirichletMultinomial dplyr IRanges MASS MatrixGenerics MultiAssayExperiment rlang S4Vectors scater scuttle SingleCellExperiment SummarizedExperiment tibble tidyr TreeSummarizedExperiment vegan]; };
  miaSim = derive2 { name="miaSim"; version="1.10.0"; sha256="1grlkynbjkfndx8j44yd6sfr3yzy0fwmakjw4mg8flllqs9yqnmw"; depends=[deSolve MatrixGenerics poweRlaw S4Vectors SummarizedExperiment TreeSummarizedExperiment]; };
  miaViz = derive2 { name="miaViz"; version="1.12.0"; sha256="1dpvqvh9sg6visf4bbjd9x4wag2dzj2b5mylbxbqwcm8lic7gy03"; depends=[ape BiocGenerics BiocParallel DelayedArray DirichletMultinomial dplyr ggnewscale ggplot2 ggraph ggrepel ggtree mia purrr rlang S4Vectors scater SingleCellExperiment SummarizedExperiment tibble tidygraph tidyr tidytree TreeSummarizedExperiment viridis]; };
  microRNA = derive2 { name="microRNA"; version="1.62.0"; sha256="0jw6g5y9pgvwh10fxpr55nkq8yf6p079kvsx986sgz78y0kkm6zh"; depends=[Biostrings]; };
  microSTASIS = derive2 { name="microSTASIS"; version="1.4.0"; sha256="1gf37nqcif6blpwrlq694gl78l2g1alx13wjdxay6qfg2iaf2dln"; depends=[BiocParallel ggplot2 ggside rlang stringr TreeSummarizedExperiment]; };
  microbiome = derive2 { name="microbiome"; version="1.26.0"; sha256="1azxfydcrxi46j6lykspzchwcj0dpghjia7vfb2bppz9gh8nvk37"; depends=[Biostrings compositions dplyr ggplot2 phyloseq reshape2 Rtsne scales tibble tidyr vegan]; };
  microbiomeDASim = derive2 { name="microbiomeDASim"; version="1.18.0"; sha256="123viwwyc4yjwkc1l7r9als4bvi2sb7yxmyfidqwamw8f2vwsfcz"; depends=[Biobase ggplot2 MASS Matrix metagenomeSeq mvtnorm pbapply phyloseq tmvtnorm]; };
  microbiomeExplorer = derive2 { name="microbiomeExplorer"; version="1.14.0"; sha256="0p15wp3n2v74rfsmap0331b3xkswfyaq8a4h2xrcn3v60m5qfmzq"; depends=[Biobase biomformat broom car DESeq2 dplyr DT forcats heatmaply knitr limma lubridate magrittr matrixStats metagenomeSeq plotly purrr RColorBrewer readr reshape2 rlang rmarkdown shiny shinycssloaders shinydashboard shinyjs shinyWidgets stringr tibble tidyr vegan]; };
  microbiomeMarker = derive2 { name="microbiomeMarker"; version="1.10.0"; sha256="07w77cm7fjkqnc1rkj9dj6nashpkwbq43nwp6bsq5wp8k4y26gjn"; depends=[ALDEx2 ANCOMBC Biobase BiocGenerics BiocParallel biomformat Biostrings caret coin ComplexHeatmap DESeq2 dplyr edgeR ggplot2 ggsignif ggtree IRanges limma magrittr MASS metagenomeSeq multtest patchwork phyloseq plotROC pROC purrr rlang S4Vectors tibble tidyr tidytree vegan yaml]; };
  midasHLA = derive2 { name="midasHLA"; version="1.12.0"; sha256="0d7zpv88mfs8bgym72ljbr0wammnppc5q0pcf5970z2zapxqmczy"; depends=[assertthat broom dplyr formattable HardyWeinberg kableExtra knitr magrittr MultiAssayExperiment qdapTools rlang S4Vectors stringi SummarizedExperiment tibble]; };
  miloR = derive2 { name="miloR"; version="2.0.0"; sha256="1cb5iw90h6raflgmypd2wc8y4mbsv9g8alshh30k1kjm8vlsw92y"; depends=[BiocGenerics BiocNeighbors BiocParallel BiocSingular cowplot dplyr edgeR ggbeeswarm ggplot2 ggraph ggrepel gtools igraph irlba limma Matrix MatrixGenerics matrixStats numDeriv patchwork RColorBrewer Rcpp RcppArmadillo S4Vectors SingleCellExperiment stringr SummarizedExperiment tibble tidyr]; };
  mimager = derive2 { name="mimager"; version="1.28.0"; sha256="0n535az50yvdvbjwy0rixy4lnlc0psb454xdzqp6rh718jh5yqrf"; depends=[affy affyPLM Biobase BiocGenerics DBI gtable oligo oligoClasses preprocessCore S4Vectors scales]; };
  mina = derive2 { name="mina"; version="1.12.0"; sha256="0fkc6cf267fcz7gqaf2grvd9dl1azvymsahszkb6w0rp289nbbn6"; depends=[apcluster biganalytics bigmemory foreach ggplot2 Hmisc MCL parallelDist plyr Rcpp RcppArmadillo RcppParallel reshape2 RSpectra stringr]; };
  minet = derive2 { name="minet"; version="3.62.0"; sha256="1627gqqk8v3sx5kgm7z3wkimbz7dpf37ljrmvwbd4z6ag2yiirbj"; depends=[infotheo]; };
  minfi = derive2 { name="minfi"; version="1.50.0"; sha256="1hk44wddcygh4j7jmj1b0p40hf5qdy1m78x14j19h7z9aq4azdij"; depends=[beanplot Biobase BiocGenerics BiocParallel Biostrings bumphunter data_table DelayedArray DelayedMatrixStats genefilter GenomeInfoDb GenomicRanges GEOquery HDF5Array illuminaio IRanges lattice limma MASS mclust nlme nor1mix preprocessCore quadprog RColorBrewer reshape S4Vectors siggenes SummarizedExperiment]; };
  mirIntegrator = derive2 { name="mirIntegrator"; version="1.34.0"; sha256="1saj71y2h3zczq16ypvmvy17z95klxawiifrlrxw3b61pnf7lpn0"; depends=[AnnotationDbi ggplot2 graph org_Hs_eg_db Rgraphviz ROntoTools]; };
  mirTarRnaSeq = derive2 { name="mirTarRnaSeq"; version="1.12.0"; sha256="1wn27pnmax2ay13a6mms6wrhskvqlwmg45jifbfhna1d5ly18rqh"; depends=[assertthat caTools corrplot data_table dplyr ggplot2 MASS pheatmap pscl purrr R_utils reshape2 viridis]; };
  missMethyl = derive2 { name="missMethyl"; version="1.38.0"; sha256="0fnqa7v6lgld4pdqnvgdzly73aj4a4cn8sgszicxsyn1damxsjiw"; depends=[AnnotationDbi BiasedUrn Biobase BiocGenerics GenomicRanges GO_db IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest IlluminaHumanMethylationEPICanno_ilm10b4_hg19 IlluminaHumanMethylationEPICmanifest IRanges limma methylumi minfi org_Hs_eg_db ruv S4Vectors statmod stringr SummarizedExperiment]; };
  missRows = derive2 { name="missRows"; version="1.24.0"; sha256="0p51nnfxhz5lqxm4vbqhxczaa774g13sh65czj1kkrrzp1g65wm5"; depends=[ggplot2 gtools MultiAssayExperiment plyr S4Vectors]; };
  mistyR = derive2 { name="mistyR"; version="1.12.0"; sha256="0w0ij222749pv89y0gq9c01cgsasw1lb3g0bx3sf6j62gdlf1gdp"; depends=[assertthat caret deldir digest distances dplyr filelock furrr ggplot2 purrr R_utils ranger readr ridge rlang rlist stringr tibble tidyr tidyselect withr]; };
  mitch = derive2 { name="mitch"; version="1.16.0"; sha256="1x65vxjbbd7vswv9lpa0fx5l1m629n0iayb54s3xhidn3xylizsb"; depends=[beeswarm echarts4r GGally ggplot2 gplots gridExtra kableExtra knitr MASS plyr reshape2 rmarkdown]; };
  mitoClone2 = derive2 { name="mitoClone2"; version="1.10.0"; sha256="1vmbyraranbfywk1mmr2arbzw8fsxkyqh5nkzd2w92vpahp7vn2d"; depends=[deepSNV GenomicRanges ggplot2 pheatmap reshape2 Rhtslib S4Vectors]; };
  mixOmics = derive2 { name="mixOmics"; version="6.28.0"; sha256="03pdg2hz4wnyigqakb9098ak9ww8fhwypzn006hfad0s042p9wvj"; depends=[BiocParallel corpcor dplyr ellipse ggplot2 ggrepel gridExtra igraph lattice MASS matrixStats rARPACK RColorBrewer reshape2 tidyr]; };
  mnem = derive2 { name="mnem"; version="1.20.0"; sha256="0i93fnqpf8m90bkyvgzccj2x4phg9k1wb6k8fs04qsid0b9ksnpd"; depends=[cluster data_table e1071 flexclust ggplot2 graph lattice Linnorm matrixStats naturalsort Rcpp RcppEigen Rgraphviz snowfall tsne wesanderson]; };
  moanin = derive2 { name="moanin"; version="1.12.0"; sha256="15agfggzbdgpx974yvixh8c8mv8wklg6zfzzr7ywpv2cixxazhwq"; depends=[ClusterR edgeR limma MASS matrixStats NMI reshape2 S4Vectors SummarizedExperiment topGO viridis zoo]; };
  mobileRNA = derive2 { name="mobileRNA"; version="1.0.11"; sha256="10p37qr8wz6chh44fh1nri2db5qqghbbzbpjm02safxdx7h88081"; depends=[BiocGenerics bioseq Biostrings data_table DESeq2 dplyr edgeR GenomeInfoDb GenomicRanges ggplot2 ggrepel IRanges pheatmap progress RColorBrewer reticulate rlang rtracklayer S4Vectors scales SimDesign SummarizedExperiment tidyr tidyselect]; };
  mogsa = derive2 { name="mogsa"; version="1.38.0"; sha256="01hr97j5i20qwpck6nfr79wx31y7igz1wzr2m1zdivggb4jg94x7"; depends=[Biobase BiocGenerics cluster corpcor genefilter gplots graphite GSEABase svd]; };
  monaLisa = derive2 { name="monaLisa"; version="1.10.0"; sha256="0znan1yh35mxrjn6x5xz2g5pl0dhh0nklyx8rbsn09hn1khb8y5l"; depends=[BiocGenerics BiocParallel Biostrings BSgenome circlize ComplexHeatmap GenomeInfoDb GenomicRanges glmnet IRanges RSQLite S4Vectors stabs SummarizedExperiment TFBSTools vioplot XVector]; };
  monocle = derive2 { name="monocle"; version="2.32.0"; sha256="0b09mf9fph0mb0zing0prc757d223858q9lj4j3kfpfjpd3jffai"; depends=[Biobase BiocGenerics biocViews cluster combinat DDRTree dplyr fastICA ggplot2 HSMMSingleCell igraph irlba leidenbase limma MASS Matrix matrixStats pheatmap plyr proxy RANN Rcpp reshape2 Rtsne slam stringr tibble VGAM viridis]; };
  mosaics = derive2 { name="mosaics"; version="2.42.0"; sha256="000bwz1z8nwzgyaz69z6krr4ksggpsq48ni9rzl25m1bc27skldj"; depends=[GenomeInfoDb GenomicAlignments GenomicRanges IRanges lattice MASS Rcpp Rsamtools S4Vectors]; };
  mosbi = derive2 { name="mosbi"; version="1.10.0"; sha256="0kvwsiwqvsphgjcflr1zjhp91k867bqg6x6gj72kl6x9an3rxpri"; depends=[akmbiclust BH biclust fabia igraph isa2 QUBIC RColorBrewer Rcpp RcppParallel xml2]; };
  mosdef = derive2 { name="mosdef"; version="1.0.0"; sha256="14zv9mgiqcj2s34hg8wfdij1gss324rkq42clg8f3ancambj74vp"; depends=[AnnotationDbi clusterProfiler DESeq2 DT ggforce ggplot2 ggrepel GO_db goseq htmltools RColorBrewer rlang S4Vectors scales SummarizedExperiment topGO]; };
  motifStack = derive2 { name="motifStack"; version="1.48.0"; sha256="15v4z1a0kg4ic411aprzc9b7i2l6c456sfj3jaxy95anw3j3iskj"; depends=[ade4 Biostrings ggplot2 htmlwidgets TFBSTools XML]; };
  motifTestR = derive2 { name="motifTestR"; version="1.0.3"; sha256="19m8y69cd1x79cqwgwf6360mv7kn0a2gv3lphy2i60p6vlq99s8j"; depends=[Biostrings GenomeInfoDb GenomicRanges ggplot2 harmonicmeanp IRanges matrixStats patchwork rlang S4Vectors universalmotif]; };
  motifbreakR = derive2 { name="motifbreakR"; version="2.18.0"; sha256="1mxs83l8yrbcx353h0wpc0lczn1jc0y5vg59y9g9dabk41csib47"; depends=[BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicRanges Gviz IRanges matrixStats MotifDb motifStack pwalign rtracklayer S4Vectors stringr SummarizedExperiment TFMPvalue VariantAnnotation]; };
  motifcounter = derive2 { name="motifcounter"; version="1.28.0"; sha256="1h6wbqn2xbj5ggx0sgp09cvrkcafq7i70mbskg2y9l9nryb38g2z"; depends=[Biostrings]; };
  motifmatchr = derive2 { name="motifmatchr"; version="1.26.0"; sha256="1wpvdg5x51cbzpqa4s2s0zl9h7fsrsp87mxxlhxs65zx6yyfj2xl"; depends=[Biostrings BSgenome GenomeInfoDb GenomicRanges IRanges Matrix Rcpp RcppArmadillo Rsamtools S4Vectors SummarizedExperiment TFBSTools]; };
  mpra = derive2 { name="mpra"; version="1.26.0"; sha256="181v4ickndbng6bhvvzyn92kq61izjhx27hkbsryqgnf0xlx1c33"; depends=[BiocGenerics limma S4Vectors scales statmod SummarizedExperiment]; };
  msImpute = derive2 { name="msImpute"; version="1.14.0"; sha256="1qjkaa5ksd67izfw5jgg1l843jn6d7h0asp99sd340wbqcdfnyix"; depends=[data_table dplyr FNN limma matrixStats mvtnorm pdist reticulate scran softImpute tidyr]; };
  msPurity = derive2 { name="msPurity"; version="1.30.1"; sha256="03h492l2x8isd1h4zmr5k6xykswimqfcxfgd67xpjjr0anrc8yl0"; depends=[DBI dbplyr doSNOW dplyr fastcluster foreach ggplot2 magrittr mzR plyr Rcpp reshape2 RSQLite stringr]; };
  msa = derive2 { name="msa"; version="1.36.0"; sha256="05i6pp10nn4icl51rx3b48s861hnd1yx72d933fphm6a5082zxms"; depends=[BiocGenerics Biostrings IRanges Rcpp S4Vectors]; };
  msgbsR = derive2 { name="msgbsR"; version="1.28.0"; sha256="06nbcb1nkci83kjl9l05d3vyfz4w21y0s51wg344bzjra1ycb9gl"; depends=[BSgenome easyRNASeq edgeR GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggbio ggplot2 IRanges plyr R_utils Rsamtools S4Vectors SummarizedExperiment]; };
  mslp = derive2 { name="mslp"; version="1.6.0"; sha256="0qafwb6rp0r0h5iazj13q703yvld5s1si93vn4gcxk66pgg9fm3w"; depends=[data_table doRNG fmsb foreach magrittr org_Hs_eg_db pROC randomForest RankProd]; };
  msmsEDA = derive2 { name="msmsEDA"; version="1.42.0"; sha256="1fzw36181rw7z62qggq7j22qhq8zrblpmv8qkqlfg140ywvwv08a"; depends=[gplots MASS MSnbase RColorBrewer]; };
  msmsTests = derive2 { name="msmsTests"; version="1.42.0"; sha256="0fadwss9z4bfgkhrrqv322j8x40l5cl4ib85057h4fn03qdijqhq"; depends=[edgeR msmsEDA MSnbase qvalue]; };
  msqrob2 = derive2 { name="msqrob2"; version="1.12.0"; sha256="1mg4a9mjvzj4y6jw5qpz53wg1h7z6a5l2b20ibp0wr67rns5xkix"; depends=[BiocParallel codetools limma lme4 MASS Matrix MultiAssayExperiment purrr QFeatures SummarizedExperiment]; };
  multiClust = derive2 { name="multiClust"; version="1.34.0"; sha256="1md8zli6fhcb5ccy6yksl6c62vfqc2ifznxvpvzch2j1h2fswx84"; depends=[amap cluster ctc dendextend mclust survival]; };
  multiGSEA = derive2 { name="multiGSEA"; version="1.14.0"; sha256="14mn8r3n1r9mrpng3b6hl20mmwxz3ns122qnx59lsja7danl9w0w"; depends=[AnnotationDbi dplyr fgsea graphite magrittr metaboliteIDmapping metap rappdirs rlang]; };
  multiHiCcompare = derive2 { name="multiHiCcompare"; version="1.22.0"; sha256="0h5b8yaqxy0gpm1kndv0dyz6pvacdy7vh3mbdkbz04q4ng1jnk12"; depends=[aggregation BiocParallel data_table dplyr edgeR GenomeInfoDb GenomeInfoDbData GenomicRanges HiCcompare pbapply pheatmap qqman]; };
  multiMiR = derive2 { name="multiMiR"; version="1.26.0"; sha256="0pzifw4b61v1wrfy6lsb5i4xxpmhl3g6sml09akfdy0skfx5lam8"; depends=[AnnotationDbi BiocGenerics dplyr purrr RCurl tibble XML]; };
  multiWGCNA = derive2 { name="multiWGCNA"; version="1.2.0"; sha256="1y2rwwy5q2ak861hg8nm5f13rmf2b9dmhsmjwvxc75nzdjg9yqcz"; depends=[cowplot data_table dcanr dplyr flashClust ggalluvial ggplot2 ggrepel igraph patchwork readr reshape2 scales stringr SummarizedExperiment WGCNA]; };
  multicrispr = derive2 { name="multicrispr"; version="1.14.0"; sha256="1625pqby6b0k67vn1h90j5899q5rhc815b64nywnvxlaia7hjvpm"; depends=[BiocGenerics Biostrings BSgenome CRISPRseek data_table GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 karyoploteR magrittr plyranges Rbowtie reticulate rtracklayer stringi tidyr tidyselect]; };
  multiscan = derive2 { name="multiscan"; version="1.64.0"; sha256="0cp2fy4hl5cdgrii9nl53cd22h87hxsdixhpdi9is914v9s42rkr"; depends=[Biobase]; };
  multistateQTL = derive2 { name="multistateQTL"; version="1.0.0"; sha256="1y983wj9awz29rv2fg8ryyindza8gjn54dn775p00zqs7qjnny3m"; depends=[circlize collapse ComplexHeatmap data_table dplyr fitdistrplus ggplot2 mashr matrixStats QTLExperiment S4Vectors SummarizedExperiment tidyr viridis]; };
  multtest = derive2 { name="multtest"; version="2.60.0"; sha256="04dv5rcqwpv0im7j3hvcj8hjybgs4a384zgnjyqbcipcicd2rjz4"; depends=[Biobase BiocGenerics MASS survival]; };
  mumosa = derive2 { name="mumosa"; version="1.12.0"; sha256="1r3i19q5i2pfs8xaag4qcb64hxwkz49msbvv454n5cb2zp1nafvd"; depends=[batchelor beachmat BiocGenerics BiocNeighbors BiocParallel BiocSingular DelayedArray DelayedMatrixStats igraph IRanges Matrix metapod S4Vectors ScaledMatrix scran scuttle SingleCellExperiment SummarizedExperiment uwot]; };
  muscat = derive2 { name="muscat"; version="1.18.0"; sha256="1gafcq3p693f28gz3p8hk8mlxd9zja95h8953sr56n7krfffy1gi"; depends=[BiocParallel blme ComplexHeatmap data_table DESeq2 dplyr edgeR ggplot2 glmmTMB limma lme4 lmerTest Matrix matrixStats progress purrr S4Vectors scales scater sctransform scuttle SingleCellExperiment SummarizedExperiment variancePartition viridis]; };
  muscle = derive2 { name="muscle"; version="3.46.0"; sha256="1jx71gzjd9jnr1xa0c0zzjg5a8qhf8czrh4mwbvnclr7g1l21cdq"; depends=[Biostrings]; };
  musicatk = derive2 { name="musicatk"; version="1.14.0"; sha256="1mp8c42pk5pl4ymvz0vjvgh0vq10kk67844vvspbhwpfdmsabr2b"; depends=[Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 BSgenome_Hsapiens_UCSC_hg38 BSgenome_Mmusculus_UCSC_mm10 BSgenome_Mmusculus_UCSC_mm9 cluster ComplexHeatmap data_table decompTumor2Sig dplyr factoextra GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 ggpubr ggrepel gridExtra gtools IRanges maftools magrittr MASS Matrix matrixTests MCMCprecision NMF philentropy plotly rlang S4Vectors shiny stringi stringr SummarizedExperiment tibble tidyr tidyverse topicmodels TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Hsapiens_UCSC_hg38_knownGene uwot VariantAnnotation]; };
  mygene = derive2 { name="mygene"; version="1.40.0"; sha256="0ybvabgdjm63yvvkpkldqddvdcfsncr25rnsw17kbdachar29shj"; depends=[GenomicFeatures Hmisc httr jsonlite plyr S4Vectors sqldf txdbmaker]; };
  myvariant = derive2 { name="myvariant"; version="1.34.0"; sha256="1f82x3vahbsccvyg5gvi34llanzscpvp0pbqhm1ki9frx9hqwysz"; depends=[GenomeInfoDb Hmisc httr jsonlite magrittr plyr S4Vectors VariantAnnotation]; };
  mzID = derive2 { name="mzID"; version="1.42.0"; sha256="0kh9swzh3hvi6qi64cgr13f22s1mgvz2rid5psb1gy4l3biwadj5"; depends=[doParallel foreach iterators plyr ProtGenerics XML]; };
  mzR = derive2 { name="mzR"; version="2.38.0"; sha256="02dz23xns9ryz98nip1w68h9q5ckxpyl1zvzklsp4j7p9z2400dk"; depends=[Biobase BiocGenerics ncdf4 ProtGenerics Rcpp Rhdf5lib]; };
  ncGTW = derive2 { name="ncGTW"; version="1.18.0"; sha256="1x9q4c3xkz984nz33bbh753181qx655zkl46i00h7a9khnab9cdv"; depends=[BiocParallel Rcpp xcms]; };
  ncRNAtools = derive2 { name="ncRNAtools"; version="1.14.0"; sha256="151s12kg88x4nymzvpzwlfil7rvrbaa99agfxzz03r8dyjnqrqlq"; depends=[GenomicRanges ggplot2 httr IRanges S4Vectors xml2]; };
  ncdfFlow = derive2 { name="ncdfFlow"; version="2.50.0"; sha256="1mbq3190nxlzhfb58i7s2f5f9fngda1icnihmyplagh64savlpcn"; depends=[BH Biobase BiocGenerics cpp11 flowCore Rhdf5lib zlibbioc]; };
  ndexr = derive2 { name="ndexr"; version="1.26.0"; sha256="1jl7z4a1rdsivc774k15v3q40isgp1ly3lsmgflfkq7jsx62xl5j"; depends=[httr jsonlite plyr RCX tidyr]; };
  nearBynding = derive2 { name="nearBynding"; version="1.14.0"; sha256="0ni6mipdbwzc0gi8mws1d1b8ylj0pjlvi81kv9r3pm93psr67pj3"; depends=[BiocGenerics dplyr GenomeInfoDb GenomicRanges ggplot2 gplots magrittr matrixStats plyranges R_utils rlang Rsamtools rtracklayer S4Vectors transport TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Hsapiens_UCSC_hg38_knownGene]; };
  nempi = derive2 { name="nempi"; version="1.12.0"; sha256="069b7kmpz38s7240ac8iw8m80w62lrly01khfl8b3kikhlr82jcq"; depends=[e1071 epiNEM matrixStats mnem naturalsort nnet randomForest]; };
  netDx = derive2 { name="netDx"; version="1.16.0"; sha256="00ghcj5hzb06pi9aj2rdnasyqgqnvr9qjb0m6b0476yv2mx5x24k"; depends=[bigmemory BiocFileCache combinat doParallel foreach GenomeInfoDb GenomicRanges ggplot2 glmnet httr igraph IRanges MultiAssayExperiment plotrix pracma rappdirs RColorBrewer reshape2 ROCR Rtsne S4Vectors]; };
  netSmooth = derive2 { name="netSmooth"; version="1.24.0"; sha256="0nry64lvqwwq672c6callfjfa0y14igvqpvrvfs2hm0qj8qmg2q8"; depends=[cluster clusterExperiment data_table DelayedArray entropy HDF5Array Matrix scater SingleCellExperiment SummarizedExperiment]; };
  netZooR = derive2 { name="netZooR"; version="1.8.0"; sha256="0z1wi0csnpjz70q5pl5wmdfgqnq66yk9gysxxid8rmkagqxvbg73"; depends=[AnnotationDbi assertthat Biobase data_table doParallel dplyr foreach ggdendro ggplot2 GO_db GOstats gplots igraph MASS Matrix matrixcalc matrixStats nnet org_Hs_eg_db pandaR penalized RCy3 reshape reshape2 reticulate STRINGdb tidyr vegan viridisLite yarn]; };
  netboost = derive2 { name="netboost"; version="2.12.0"; sha256="0xirmys108qhxg7073vm90463a7qs6z557516ff1yczhldaq4psy"; depends=[BiocStyle colorspace dynamicTreeCut impute R_utils Rcpp RcppParallel WGCNA]; };
  nethet = derive2 { name="nethet"; version="1.36.0"; sha256="1mr42pdm2sjpbmiiwjpqd0pvbnc5imlgmg14swc2pp66dl60g7b3"; depends=[CompQuadForm GeneNet ggm ggplot2 glasso glmnet GSA huge ICSNP limma mclust multtest mvtnorm network]; };
  netprioR = derive2 { name="netprioR"; version="1.30.0"; sha256="0kgsgjc2q4wvdwbqfx79ql85k6xc60165zair7nwc89wn07rnswy"; depends=[doParallel dplyr foreach ggplot2 gridExtra Matrix pROC sparseMVN]; };
  netresponse = derive2 { name="netresponse"; version="1.64.0"; sha256="13lynfqsbv8cp6hd452bky4mkf029jwvryx8mzdcx15r4hwsqh5r"; depends=[BiocStyle ggplot2 graph igraph mclust minet plyr qvalue RColorBrewer reshape2 Rgraphviz rmarkdown]; };
  ngsReports = derive2 { name="ngsReports"; version="2.6.0"; sha256="11k4fbwy6shkb3z9np7wnnhbjpka3ymm8ja8dnw1jpdc3l1jx537"; depends=[BiocGenerics Biostrings checkmate dplyr forcats ggdendro ggplot2 jsonlite lifecycle lubridate patchwork plotly reshape2 rlang rmarkdown scales stringr tibble tidyr tidyselect zoo]; };
  nipalsMCIA = derive2 { name="nipalsMCIA"; version="1.2.0"; sha256="0r14hmglxlrwryc6qwn20vfrmy5k2pk7l73d3fz5bmfja06ms6n5"; depends=[ComplexHeatmap dplyr fgsea ggplot2 MultiAssayExperiment pracma rlang RSpectra scales SummarizedExperiment]; };
  nnNorm = derive2 { name="nnNorm"; version="2.68.0"; sha256="1r3klap7yazz73jh7dja1wlgg9ladfw1aaljirbiq1dvlb1q1i8f"; depends=[marray nnet]; };
  nnSVG = derive2 { name="nnSVG"; version="1.8.0"; sha256="00346z7i5hgljylv00l5pcmj3y769mqnhac0f4l7jhiww3xswfbs"; depends=[BiocParallel BRISC Matrix matrixStats SingleCellExperiment SpatialExperiment SummarizedExperiment]; };
  normalize450K = derive2 { name="normalize450K"; version="1.32.0"; sha256="0iavswwgv0qhnwlf99nxrpmswbd5m9ihi7i68gby07hmsl5gci2a"; depends=[Biobase illuminaio quadprog]; };
  normr = derive2 { name="normr"; version="1.30.0"; sha256="1lkh4a6c499g4wicj4khkyhz361k4q0aydk4gc122vn4877z14c6"; depends=[bamsignals GenomeInfoDb GenomicRanges IRanges qvalue Rcpp rtracklayer]; };
  npGSEA = derive2 { name="npGSEA"; version="1.40.0"; sha256="1d9q7jy6axmh62xs4m1lxfh8j7vwq4k995l28hcfwh7qk38k4gqr"; depends=[Biobase BiocGenerics GSEABase]; };
  nuCpos = derive2 { name="nuCpos"; version="1.22.0"; sha256="03qv4p5mvwbnm2grfnrszphv3c0k2lwja5cbq27cv6il7bnz8m0m"; depends=[]; };
  nucleR = derive2 { name="nucleR"; version="2.36.0"; sha256="1gbn4rpgil579xkrwd78wc7h6h0f8j1kjz0vvlijy63i6g380wfk"; depends=[Biobase BiocGenerics Biostrings dplyr GenomeInfoDb GenomicRanges ggplot2 IRanges magrittr Rsamtools S4Vectors ShortRead]; };
  nucleoSim = derive2 { name="nucleoSim"; version="1.32.0"; sha256="0f64601jm3bvcdpls3d5njpparkb5h5v6zvhb1jf46fdvyg4xcss"; depends=[IRanges S4Vectors]; };
  nullranges = derive2 { name="nullranges"; version="1.10.0"; sha256="0a20aqqja5nkp39v7mxjnc98in63zhl00mnhsm952ja7v1l2xfsw"; depends=[data_table GenomeInfoDb GenomicRanges ggplot2 ggridges InteractionSet IRanges plyranges progress rlang S4Vectors scales]; };
  occugene = derive2 { name="occugene"; version="1.64.0"; sha256="01dgpbz3w5bbbhiz67fripxw1pwdd1iinnywvm9xgzjkdhr3g18y"; depends=[]; };
  octad = derive2 { name="octad"; version="1.6.0"; sha256="1nlad40c9mzs74zrc82smmmyknw4dr88c6zm0ywm62v0wb8l22n7"; depends=[AnnotationHub Biobase data_table DESeq2 dplyr EDASeq edgeR ExperimentHub foreach ggplot2 GSVA htmlwidgets httr limma magrittr octad_db plotly qpdf reshape2 Rfast rhdf5 RUVSeq S4Vectors]; };
  odseq = derive2 { name="odseq"; version="1.32.0"; sha256="03bhlarifh5r13ii7a5kd6gj9w0zdgjz9p89pj0lhgx2lglh2nm8"; depends=[kebabs mclust msa]; };
  oligo = derive2 { name="oligo"; version="1.68.2"; sha256="0ch6b4rg5v6fj0fgniqiigx1gnnqgwji90bxqngllman388bx867"; depends=[affxparser affyio Biobase BiocGenerics Biostrings DBI ff oligoClasses preprocessCore RSQLite zlibbioc]; };
  oligoClasses = derive2 { name="oligoClasses"; version="1.66.0"; sha256="15icfcmpwrnjpyahc4v168fpcbsml6x7h4drmsyh9l8d1284yb4n"; depends=[affyio Biobase BiocGenerics BiocManager Biostrings DBI ff foreach GenomicRanges IRanges RSQLite S4Vectors SummarizedExperiment]; };
  omada = derive2 { name="omada"; version="1.6.0"; sha256="1by6im4frl724yif9pjgcmp016hahj5xj35h1zqa4k5g8nw54f9s"; depends=[clValid diceR dplyr fpc genieclust ggplot2 glmnet kernlab pdfCluster Rcpp reshape]; };
  omicRexposome = derive2 { name="omicRexposome"; version="1.26.0"; sha256="0p3x3pp3337nvmqqssrbfh6zn2fp260ss8wjc2c90b0gr4c4h6wc"; depends=[Biobase ggplot2 ggrepel gridExtra isva limma MultiDataSet omicade4 PMA rexposome SmartSVA stringr SummarizedExperiment sva]; };
  omicade4 = derive2 { name="omicade4"; version="1.44.0"; sha256="18gp8qpmnbc5yjqyvvwvmrdybvm6zddc0r8bfglxz5wg4a91h4wk"; depends=[ade4 Biobase made4]; };
  omicplotR = derive2 { name="omicplotR"; version="1.24.0"; sha256="1zb4xik2rvznbigfh42k97mlfc4ls997cyv4ixd34qp0z3929djc"; depends=[ALDEx2 compositions DT jsonlite knitr matrixStats rmarkdown shiny vegan zCompositions]; };
  omicsPrint = derive2 { name="omicsPrint"; version="1.24.0"; sha256="0b5mccw1vpcw1i38lcy6cjr6im0iw17a3z8vwfs7f2z7nj72p8cf"; depends=[MASS matrixStats MultiAssayExperiment RaggedExperiment SummarizedExperiment]; };
  omicsViewer = derive2 { name="omicsViewer"; version="1.8.0"; sha256="0ij7slf4y708gdw06nmm2w7p3svcadvc9s44rzkgjb66is4h375g"; depends=[beeswarm Biobase curl drc DT fastmatch fgsea flatxml ggplot2 ggseqlogo htmlwidgets httr Matrix matrixStats networkD3 openxlsx plotly psych RColorBrewer reshape2 ROCR RSQLite S4Vectors shiny shinybusy shinycssloaders shinyjs shinythemes shinyWidgets stringr SummarizedExperiment survival survminer]; };
  ompBAM = derive2 { name="ompBAM"; version="1.8.0"; sha256="12r57wgqszwlm4agfbs0gfakhh87y8jpaalv2rq38nif479hpmyz"; depends=[Rcpp zlibbioc]; };
  oncomix = derive2 { name="oncomix"; version="1.26.0"; sha256="01ap90pyj3xdnhryiywa57pl0d8lj4q7qxxvf8ahhbr0a2hy8py0"; depends=[ggplot2 ggrepel mclust RColorBrewer SummarizedExperiment]; };
  oncoscanR = derive2 { name="oncoscanR"; version="1.6.0"; sha256="1n5rcnbb06pl3b27wkzzmz0l7g3hgfjpi7v7anbhscr2i1hy46b9"; depends=[GenomicRanges IRanges magrittr readr S4Vectors]; };
  onlineFDR = derive2 { name="onlineFDR"; version="2.12.0"; sha256="1sivrkb21dmb7wgdxd0q3nmjlvaqrh21c20s4lq8azn685frlznh"; depends=[progress Rcpp RcppProgress]; };
  ontoProc = derive2 { name="ontoProc"; version="1.26.0"; sha256="0v4dv6rjrivrx3npjycrlqyivbpksikkj6l8h772sa5hfnwmf943"; depends=[AnnotationHub Biobase BiocFileCache dplyr DT graph httr igraph magrittr ontologyIndex ontologyPlot R_utils reticulate Rgraphviz S4Vectors shiny SummarizedExperiment]; };
  openCyto = derive2 { name="openCyto"; version="2.16.1"; sha256="13ndjvm3l5pl1jgv7bqp78didqq3rx6br4p1ncqqp68mm048f2ll"; depends=[BH Biobase BiocGenerics cpp11 data_table flowClust flowCore flowViz flowWorkspace graph ncdfFlow RBGL RColorBrewer]; };
  openPrimeR = derive2 { name="openPrimeR"; version="1.26.0"; sha256="1wcwg0hpnmfzzbxsqggmgim15f4zky0xx3ynyypykyh1c5i3f4yi"; depends=[ape BiocGenerics Biostrings DECIPHER digest dplyr foreach GenomicRanges ggplot2 Hmisc IRanges lpSolveAPI magrittr openxlsx plyr pwalign RColorBrewer reshape2 S4Vectors scales seqinr stringdist stringr uniqtag XML]; };
  openPrimeRui = derive2 { name="openPrimeRui"; version="1.26.0"; sha256="0w00ya6xb70am000hybrxgcq8bpd950w36n01v4l0pfmfcvqd9fa"; depends=[DT openPrimeR rmarkdown shiny shinyBS shinyjs]; };
  oposSOM = derive2 { name="oposSOM"; version="2.22.0"; sha256="1i6jkhnb7b420zacxxiv4c0il1n7yrvg5v4qnd465d1s2wifwndn"; depends=[ape Biobase biomaRt fastICA fdrtool graph igraph pixmap png Rcpp RcppParallel RCurl scatterplot3d tsne XML]; };
  oppar = derive2 { name="oppar"; version="1.32.0"; sha256="1bdcddyw1m51x6fs928j8qmcfdkw21hi7xvgih97nyddnnl5ad5x"; depends=[Biobase GSEABase GSVA]; };
  oppti = derive2 { name="oppti"; version="1.18.0"; sha256="1lmjvncp8h3p9vb4979v5spw2yp7w2mj4w60b728njhp9cxh8k6g"; depends=[devtools ggplot2 knitr limma parallelDist pheatmap RColorBrewer reshape]; };
  optimalFlow = derive2 { name="optimalFlow"; version="1.16.0"; sha256="1b7a7xca1fb7732hwzcgz79p5pp6xsy0z5az5inv6g8z7a2wpngn"; depends=[dbscan doParallel dplyr ellipse flowMeans foreach optimalFlowData randomForest Rfast rgl rlang robustbase transport]; };
  orthogene = derive2 { name="orthogene"; version="1.10.0"; sha256="12rf9xjziziw7r02assnpa4ncryyqkfibj3bhbrq8vp7ygvbn64a"; depends=[babelgene data_table DelayedArray dplyr ggplot2 ggpubr ggtree gprofiler2 grr homologene jsonlite Matrix patchwork repmis]; };
  orthos = derive2 { name="orthos"; version="1.2.0"; sha256="0y5q9dmn6qwq8psgclwzca3bpfiyi7xh325hxj328h3fis1sm9xb"; depends=[AnnotationHub basilisk BiocParallel colorspace cowplot DelayedArray dplyr ExperimentHub ggplot2 ggpubr ggrepel ggsci HDF5Array keras orthosData plyr reticulate rlang S4Vectors SummarizedExperiment tensorflow tidyr]; };
  pRoloc = derive2 { name="pRoloc"; version="1.44.0"; sha256="0g3wlr8f5lhsz9yqs0fx2x1f07y5mxcknq0790l0hirmhlj0vvzr"; depends=[Biobase BiocGenerics BiocParallel biomaRt caret class coda dendextend e1071 FNN ggplot2 gtools hexbin kernlab knitr LaplacesDemon lattice MASS mclust mixtools MLInterfaces MSnbase mvtnorm nnet plyr proxy randomForest RColorBrewer Rcpp RcppArmadillo sampling scales]; };
  pRolocGUI = derive2 { name="pRolocGUI"; version="2.14.0"; sha256="0lxnvh2hx7zayfmdfiqhlwp3gmpx0bsz3ds67zalhvf1xmn2cn88"; depends=[Biobase BiocGenerics colorspace colourpicker dplyr DT ggplot2 MSnbase pRoloc scales shiny shinydashboard shinydashboardPlus shinyhelper shinyjs shinyWidgets]; };
  packFinder = derive2 { name="packFinder"; version="1.16.0"; sha256="0y8sw0vyfry6vfn4k9w81m9s4a98bhc5h2a4nvy666qjganhfm8i"; depends=[ape Biostrings GenomicRanges IRanges kmer S4Vectors]; };
  padma = derive2 { name="padma"; version="1.14.0"; sha256="1b5pjjd7nn6b64b0cj0alqgbp9782vf33b4m7kz9dvzacsp9n2l0"; depends=[FactoMineR MultiAssayExperiment S4Vectors SummarizedExperiment]; };
  pageRank = derive2 { name="pageRank"; version="1.14.0"; sha256="0d7mgxssyc7bbcjhhrlj4y7v4xgw16y499c0k6wcrh3y4f24xwna"; depends=[GenomicRanges igraph motifmatchr]; };
  paircompviz = derive2 { name="paircompviz"; version="1.42.0"; sha256="13znncas7s3ihjvv401fjbsg80iliv4afqw9w4jyazz4vdwgp400"; depends=[Rgraphviz]; };
  pairedGSEA = derive2 { name="pairedGSEA"; version="1.4.0"; sha256="181x2r7af4243b2jmsc71gi8jlq80d4gzkcprr0dk0sis9bh1pqj"; depends=[aggregation BiocParallel DESeq2 DEXSeq fgsea ggplot2 limma S4Vectors SummarizedExperiment sva]; };
  pairkat = derive2 { name="pairkat"; version="1.10.0"; sha256="1rxwf8nlmc18h6zi95v4xhs5hqaygpba15wsc06msslzr905s6id"; depends=[CompQuadForm data_table igraph KEGGREST magrittr SummarizedExperiment tibble]; };
  pandaR = derive2 { name="pandaR"; version="1.36.0"; sha256="1cgy9sx5nk94d43baxsm25lh64fmmmznxd832r2wnj6a7p07bbj2"; depends=[Biobase BiocGenerics ggplot2 hexbin igraph matrixStats plyr reshape RUnit]; };
  panelcn_mops = derive2 { name="panelcn.mops"; version="1.26.0"; sha256="1fmb1zixg909nqdf34z2aq0llzzsrf4pd73pc8xyachivyx73p4a"; depends=[cn_mops GenomeInfoDb GenomicRanges IRanges Rsamtools S4Vectors]; };
  panp = derive2 { name="panp"; version="1.74.0"; sha256="0w5hbjpdwy6g3x38c64r29106s1smyakzpm1qb50f6g8mf99lsvy"; depends=[affy Biobase]; };
  pareg = derive2 { name="pareg"; version="1.8.0"; sha256="1b9vvn1ppw1vbfmkzkbd6b01pkqnsknbrjv1js983dpjv23x6xlb"; depends=[basilisk devtools doFuture doRNG DOSE dplyr foreach future ggplot2 ggraph ggrepel glue hms igraph keras logger magrittr Matrix nloptr progress proxy purrr reticulate rlang stringr tensorflow tfprobability tibble tidygraph tidyr]; };
  parglms = derive2 { name="parglms"; version="1.36.0"; sha256="1b63nkd50pn1mgr8l0svi3h8rplb5g50a2xvkxa7j26w6ss8302v"; depends=[BatchJobs BiocGenerics doParallel foreach]; };
  parody = derive2 { name="parody"; version="1.62.0"; sha256="0k2gc8p9dk7j21n6hxdqjna09m6cggx47spkmxkqvwqm97mwqzrp"; depends=[]; };
  partCNV = derive2 { name="partCNV"; version="1.2.0"; sha256="0f632ih6fy46923a4cf7njkgaqwkmgbwz74djbd2awsnk02afbbw"; depends=[AnnotationHub data_table depmixS4 GenomicRanges magrittr Seurat SingleCellExperiment]; };
  pathRender = derive2 { name="pathRender"; version="1.72.0"; sha256="0dcds0agwphriqc0d8rw7yycqvxzhv7jj4xs2lvwhzwqrkxicpf1"; depends=[AnnotationDbi cMAP graph RColorBrewer Rgraphviz]; };
  pathifier = derive2 { name="pathifier"; version="1.42.0"; sha256="1m21713zj4i5iygrj0ygc5zwcrw6038hb486l6c5nvykhzc5w64p"; depends=[princurve R_oo]; };
  pathlinkR = derive2 { name="pathlinkR"; version="1.0.0"; sha256="19i840an94hpyqxz4c4piqy322ynxzf48cxbmxvf5jylxdqjnzf2"; depends=[circlize clusterProfiler ComplexHeatmap dplyr ggforce ggplot2 ggpubr ggraph ggrepel igraph purrr sigora stringr tibble tidygraph tidyr vegan visNetwork]; };
  pathview = derive2 { name="pathview"; version="1.44.0"; sha256="1papw23dhhkqmm864dc3xm028xm0ywc6sjcm7xk93f2j7yj65x0v"; depends=[AnnotationDbi graph KEGGgraph KEGGREST org_Hs_eg_db png Rgraphviz XML]; };
  pathwayPCA = derive2 { name="pathwayPCA"; version="1.20.0"; sha256="055jqyzi6lq056ibdyzxy5mzcs5f93im2fbiz73a33bqndpc9s5i"; depends=[lars survival]; };
  paxtoolsr = derive2 { name="paxtoolsr"; version="1.38.0"; sha256="0m3r8ynqkhksgj0d3si3wcnk5a801g1qklin8zm81cr1nlfx67gw"; depends=[httr igraph jsonlite plyr R_utils rappdirs readr rJava rjson XML]; };
  pcaExplorer = derive2 { name="pcaExplorer"; version="2.30.0"; sha256="1szl2gyhw55ad4phcb7qn14amjb6xg65l3p4hnjzp6rda2cy9437"; depends=[AnnotationDbi base64enc biomaRt DESeq2 DT genefilter GenomicRanges ggplot2 ggrepel GO_db GOstats heatmaply IRanges knitr limma NMF pheatmap plotly plyr rmarkdown S4Vectors scales shiny shinyAce shinyBS shinydashboard SummarizedExperiment threejs tidyr topGO]; };
  pcaMethods = derive2 { name="pcaMethods"; version="1.96.0"; sha256="1hrq0xmpr1l95hyi6ls9r86ahwf2rcbvr8m7cpg6ra0gsfyn4mpi"; depends=[Biobase BiocGenerics MASS Rcpp]; };
  pcxn = derive2 { name="pcxn"; version="2.26.0"; sha256="13gahdsvz7ss3chcvqmdyrnw31rcgiplqg7awrn930drwljlimqk"; depends=[pcxnData pheatmap]; };
  pdInfoBuilder = derive2 { name="pdInfoBuilder"; version="1.68.0"; sha256="1dcd0lscvywy5y5xfhfmn39n2iypjr4fjldfgmx8qa80b1d0xcbi"; depends=[affxparser Biobase BiocGenerics Biostrings DBI IRanges oligo oligoClasses RSQLite S4Vectors]; };
  peakPantheR = derive2 { name="peakPantheR"; version="1.18.0"; sha256="0rr8kmk6d4m7aipmz2pi2rzwxhxc600bk9r24fdgsw4kbh17fman"; depends=[bslib doParallel DT foreach ggplot2 gridExtra lubridate minpack_lm MSnbase mzR pracma scales shiny shinycssloaders stringr svglite XML]; };
  peco = derive2 { name="peco"; version="1.16.0"; sha256="1w3yf77lk5whdhicq6rzp61cpivvkc0jj5wsasjxaqvl7lf1k6fs"; depends=[assertthat circular conicfit doParallel foreach genlasso scater SingleCellExperiment SummarizedExperiment]; };
  pengls = derive2 { name="pengls"; version="1.10.0"; sha256="0i3v91a3y5gyns5pnjnx7kmfwbp66kllj4gynzfjlgpf57y4qhk4"; depends=[BiocParallel glmnet nlme]; };
  pepStat = derive2 { name="pepStat"; version="1.38.0"; sha256="1k4nf5jlpcf7bgrv08mgd575gkp08sw9w7nzab7idizdz4pvqvj4"; depends=[Biobase data_table fields GenomicRanges ggplot2 IRanges limma plyr]; };
  pepXMLTab = derive2 { name="pepXMLTab"; version="1.38.0"; sha256="1y4c4cfc8s87rdmr2z2n3p3k6mann9ywragdl0v4rizss5rj35dl"; depends=[XML]; };
  periodicDNA = derive2 { name="periodicDNA"; version="1.14.0"; sha256="1fx7kvgl9znzpz6i33zl6019m0r4jcwsvsycjwhqaz8g3b5k4z8q"; depends=[BiocParallel Biostrings BSgenome cowplot GenomeInfoDb GenomicRanges ggplot2 IRanges magrittr rtracklayer S4Vectors zoo]; };
  pfamAnalyzeR = derive2 { name="pfamAnalyzeR"; version="1.4.0"; sha256="06bp5nghgrj8qyzqp1v869vck1j10093r9dp67w0kav4x4srkyyl"; depends=[dplyr magrittr readr stringr tibble]; };
  pgca = derive2 { name="pgca"; version="1.28.0"; sha256="0yj7vcx3qyy3296k1lzi3qfgwcf0h08x784ygh5wkfa4y23azj0b"; depends=[]; };
  pgxRpi = derive2 { name="pgxRpi"; version="1.0.1"; sha256="063xyx9i6k06klb8zpq64ln77lyadz6m6h86krk4mfxfbn214v9b"; depends=[attempt circlize dplyr GenomicRanges ggplot2 httr lubridate plyr S4Vectors SummarizedExperiment survival survminer]; };
  phantasus = derive2 { name="phantasus"; version="1.24.0"; sha256="0gw7d8n4nb3rjari1zrdqqhdz0ca0mgw40yr56r3x3gsyqpjlzxa"; depends=[AnnotationDbi assertthat Biobase ccaPP config curl data_table DESeq2 edgeR fgsea fs GEOquery ggplot2 gtable htmltools httpuv httr jsonlite limma Matrix opencpu phantasusLite pheatmap protolite rhdf5 rhdf5client Rook scales stringr svglite XML yaml]; };
  phantasusLite = derive2 { name="phantasusLite"; version="1.2.0"; sha256="1adr0z6gg72dhcfa98b5sfs1lsyypbs882wckzjgmjv16v56na4r"; depends=[Biobase data_table httr rhdf5client stringr]; };
  phenoTest = derive2 { name="phenoTest"; version="1.52.0"; sha256="1l5r19gksrbqsdl9v8r2f4hrsbsxbkircbp3rxiis5x6y17ca9hy"; depends=[annotate AnnotationDbi Biobase biomaRt BMA Category ellipse genefilter ggplot2 gplots GSEABase Heatplus hgu133a_db Hmisc hopach limma mgcv survival xtable]; };
  phenomis = derive2 { name="phenomis"; version="1.6.0"; sha256="0d6kc034lbbsyvr30p0a1c3nrpa39kkpwjqbkdvm6cwvfyiaf3iy"; depends=[Biobase biodb biodbChebi data_table futile_logger ggplot2 ggrepel htmlwidgets igraph limma MultiAssayExperiment MultiDataSet plotly PMCMRplus ranger RColorBrewer ropls SummarizedExperiment tibble tidyr VennDiagram]; };
  phenopath = derive2 { name="phenopath"; version="1.28.0"; sha256="073v6sxf3k10257npbmxxh6bvdjwnvk3zh1zq2yvm9jzg2n34i99"; depends=[dplyr ggplot2 Rcpp SummarizedExperiment tibble tidyr]; };
  philr = derive2 { name="philr"; version="1.30.0"; sha256="1j6lq7rprvqs8azj13l9qd5xylcmqgw6687cqn0rbsdhgiaqlh5h"; depends=[ape ggplot2 ggtree phangorn tidyr]; };
  phosphonormalizer = derive2 { name="phosphonormalizer"; version="1.28.0"; sha256="1l58dv15fffmji7yzw96gg6221b895kaxjpxphx6ixl203m5gz03"; depends=[matrixStats plyr]; };
  phyloseq = derive2 { name="phyloseq"; version="1.48.0"; sha256="0a8q4wcqcxs7933bxg9bg03ps6hnybvcpqmlpz1pjy3affzghcbi"; depends=[ade4 ape Biobase BiocGenerics biomformat Biostrings cluster data_table foreach ggplot2 igraph multtest plyr reshape2 scales vegan]; };
  piano = derive2 { name="piano"; version="2.20.0"; sha256="0v168wkwxzh70h2c08ad4dzlgklbgvx1fzwrzw2mqq0fyczj0diw"; depends=[Biobase BiocGenerics DT fgsea gplots htmlwidgets igraph marray relations scales shiny shinydashboard shinyjs visNetwork]; };
  pickgene = derive2 { name="pickgene"; version="1.76.0"; sha256="1a13p8n75bnz3dyxvp83vpxp23i85dq22mwn9mada9i8dixy49mc"; depends=[MASS]; };
  pipeComp = derive2 { name="pipeComp"; version="1.14.0"; sha256="1wq7b5f5hdxg2q6av782dm2gmzzdx58ss7ns9vizyxli3k926p5n"; depends=[aricode BiocParallel circlize clue cluster ComplexHeatmap cowplot dplyr ggplot2 intrinsicDimension knitr Matrix matrixStats randomcoloR RColorBrewer reshape2 Rtsne S4Vectors scales scater scran Seurat SingleCellExperiment SummarizedExperiment uwot viridisLite]; };
  pipeFrame = derive2 { name="pipeFrame"; version="1.20.0"; sha256="12wi520dylsjmf3vzwsdqqfqgcz5g4znfs2n5sd9b4805smc8k8l"; depends=[Biostrings BSgenome digest GenomeInfoDb magrittr rmarkdown visNetwork]; };
  planet = derive2 { name="planet"; version="1.12.0"; sha256="0qfvddm5hnhplhni8xwwivc87n4gvvwxslxhrmvx10zsppn536g4"; depends=[dplyr magrittr tibble]; };
  planttfhunter = derive2 { name="planttfhunter"; version="1.4.0"; sha256="1sz19ryxdlsm30by416bi6icnkcd5znim31x9w7f4x762fv6ffvp"; depends=[Biostrings SummarizedExperiment]; };
  plasmut = derive2 { name="plasmut"; version="1.2.0"; sha256="0k8mjvs8vwgx98m19zk2ckyz5maf72px68kr0wniclmkapls3l0a"; depends=[dplyr tibble]; };
  plgem = derive2 { name="plgem"; version="1.76.0"; sha256="0my4jpxw3xy9n40cqvdaz6ay7gpwshn2iqxr43knrk0ckpyxx2cr"; depends=[Biobase MASS]; };
  plier = derive2 { name="plier"; version="1.74.0"; sha256="0svk8p4h212l3igfmrxhqi90xz74jicr5y780556k9bcj3jwqg5c"; depends=[affy Biobase]; };
  plotGrouper = derive2 { name="plotGrouper"; version="1.22.0"; sha256="169786jrqbcf8qhysar22cb5am2zh6j7w601k9784b4ywhxh3ac0"; depends=[colourpicker dplyr egg ggplot2 ggpubr gridExtra gtable Hmisc magrittr readr readxl rlang scales shiny shinythemes stringr tibble tidyr]; };
  plotgardener = derive2 { name="plotgardener"; version="1.10.1"; sha256="1pcjc4an5pspafb9pvmia73g8cdp6n2paz2m952p1xnwsp9ijsi7"; depends=[curl data_table dplyr GenomeInfoDb GenomicRanges ggplotify IRanges plyranges purrr RColorBrewer Rcpp rlang strawr withr]; };
  plyinteractions = derive2 { name="plyinteractions"; version="1.2.0"; sha256="095sb616r5xwcbqsgw4b7kiywl6lbwp6rbs80qymglpqkbywwp7j"; depends=[BiocGenerics dplyr GenomeInfoDb GenomicRanges InteractionSet IRanges plyranges rlang S4Vectors tibble tidyselect]; };
  plyranges = derive2 { name="plyranges"; version="1.24.0"; sha256="0rh5l6bd80nhffqpnnc2c00mvp8p32ykld05h94c3y8c9mvmsl58"; depends=[BiocGenerics dplyr GenomeInfoDb GenomicAlignments GenomicRanges IRanges magrittr rlang Rsamtools rtracklayer S4Vectors tidyselect]; };
  pmm = derive2 { name="pmm"; version="1.36.0"; sha256="1qsv7mrz1w5msxkiqp1rvxy5cgfjkwm432c12rr3gm4z3jy1ma5h"; depends=[lme4]; };
  pmp = derive2 { name="pmp"; version="1.16.0"; sha256="0ryjv1g63nzipym1ijln6nv2w5flv15030b9jp09ddi5p3hn5h1j"; depends=[ggplot2 impute matrixStats missForest pcaMethods reshape2 S4Vectors SummarizedExperiment]; };
  podkat = derive2 { name="podkat"; version="1.36.0"; sha256="0bjan7w0mxylabvaf3c2nqv5yifddslhd4dh360il193qs07g72c"; depends=[Biobase BiocGenerics Biostrings BSgenome GenomeInfoDb GenomicRanges IRanges Matrix Rcpp Rhtslib Rsamtools]; };
  pogos = derive2 { name="pogos"; version="1.24.0"; sha256="1i5cmz5icgmd2xd9r19i6xr9v4nydqpydbf84c8ann07p0qyg5b3"; depends=[ggplot2 httr ontoProc rjson S4Vectors shiny]; };
  polyester = derive2 { name="polyester"; version="1.39.0"; sha256="0fw0qhmbygjq4ryspyqikb8rxfn33ks000j7sshgfg8hf2rmqg3x"; depends=[Biostrings IRanges limma logspline S4Vectors zlibbioc]; };
  powerTCR = derive2 { name="powerTCR"; version="1.24.0"; sha256="04w6jhpc1vkqrm3dr5igp1iwkammmi53mqafjz694n379hamxrhg"; depends=[cubature doParallel evmix foreach magrittr purrr truncdist vegan VGAM]; };
  ppcseq = derive2 { name="ppcseq"; version="1.12.0"; sha256="0b8s29zhw3s3nbxf57fa9cixfdwx0q4d3g4b6bi35fsr0r90a44q"; depends=[benchmarkme BH dplyr edgeR foreach ggplot2 lifecycle magrittr purrr Rcpp RcppEigen RcppParallel rlang rstan rstantools StanHeaders tibble tidybayes tidyr]; };
  pqsfinder = derive2 { name="pqsfinder"; version="2.20.0"; sha256="0v2skn7c1vy7s8hbl92v9mq3ckp3xnyq0ijvmihzm5z8yz9bclx6"; depends=[BH Biostrings GenomicRanges IRanges Rcpp S4Vectors]; };
  pram = derive2 { name="pram"; version="1.20.0"; sha256="0cc74whwnjgf8svfps2i0c9n243rzq15ffdwdwdd986mwn6v5kvv"; depends=[BiocGenerics BiocParallel data_table GenomeInfoDb GenomicAlignments GenomicRanges IRanges Rsamtools rtracklayer S4Vectors]; };
  prebs = derive2 { name="prebs"; version="1.44.0"; sha256="0mzy2w5jq08370nl53ms2xadr46lc0hvlgv2kkw5ikjf58rsfgx7"; depends=[affy Biobase GenomeInfoDb GenomicAlignments GenomicRanges IRanges RPA S4Vectors]; };
  preciseTAD = derive2 { name="preciseTAD"; version="1.14.0"; sha256="0gxq07q8nv2h0j20vsjgbah8121l79sxjhjg9rf79r73pmm1733f"; depends=[caret cluster dbscan doSNOW e1071 foreach GenomicRanges gtools IRanges ModelMetrics pbapply pROC PRROC randomForest rCGH S4Vectors]; };
  preprocessCore = derive2 { name="preprocessCore"; version="1.66.0"; sha256="1cd91iakbpf2hjysc44sqqrah63cgq4fz3n8j81virfwl3ir95xm"; depends=[]; };
  primirTSS = derive2 { name="primirTSS"; version="1.22.0"; sha256="1c932ynp5rsymz6z7m9v38fwm30gja7z60yq3xjwj6gxw1rf7sy5"; depends=[BiocGenerics Biostrings BSgenome_Hsapiens_UCSC_hg38 dplyr GenomicRanges GenomicScores Gviz IRanges JASPAR2018 phastCons100way_UCSC_hg38 purrr R_utils rtracklayer S4Vectors shiny stringr TFBSTools tibble tidyr]; };
  proActiv = derive2 { name="proActiv"; version="1.14.0"; sha256="1x70jjym4220vkwzhr2cn4hjxvxdh2mhwfyd8rp3wp6gh7d9q87a"; depends=[AnnotationDbi BiocParallel data_table DESeq2 dplyr GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 gplots IRanges rlang S4Vectors scales SummarizedExperiment tibble txdbmaker]; };
  proBAMr = derive2 { name="proBAMr"; version="1.38.0"; sha256="183wf1045s9ckkcwns33ps237cdip67kv9csx499h2aghhwwvf3y"; depends=[AnnotationDbi Biostrings GenomicFeatures GenomicRanges IRanges rtracklayer txdbmaker]; };
  proDA = derive2 { name="proDA"; version="1.18.0"; sha256="1h3695q4al7pr3q1vj1qfiig6c5lhljxlvxpfbv6k0h987ha1fiw"; depends=[BiocGenerics extraDistr S4Vectors SummarizedExperiment]; };
  procoil = derive2 { name="procoil"; version="2.32.0"; sha256="02p8dy3gi86zp5z842sjx3rcy8a7kvji8mg4xw5krzz4pkzjjk8y"; depends=[Biostrings kebabs S4Vectors]; };
  profileScoreDist = derive2 { name="profileScoreDist"; version="1.32.0"; sha256="0sf2k2iccvfidy0sf2p4xi3bp5gd67izbr2075w302d8085rw1i7"; depends=[BiocGenerics Rcpp]; };
  profileplyr = derive2 { name="profileplyr"; version="1.20.0"; sha256="1gpjmkn1s509smaal15rg3629y69vnxifhyfd8xa65x7m9v1fvbc"; depends=[BiocGenerics BiocParallel ChIPseeker circlize ComplexHeatmap dplyr EnrichedHeatmap GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 IRanges magrittr org_Hs_eg_db org_Mm_eg_db pheatmap R_utils rGREAT rjson rlang Rsamtools rtracklayer S4Vectors soGGi SummarizedExperiment tidyr tiff TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Hsapiens_UCSC_hg38_knownGene TxDb_Mmusculus_UCSC_mm10_knownGene TxDb_Mmusculus_UCSC_mm9_knownGene]; };
  progeny = derive2 { name="progeny"; version="1.26.0"; sha256="1f5y1sza9vm7wqd4mp5g7sypc9kbf9zpl015rbl41wz4y3ai21sb"; depends=[Biobase decoupleR dplyr ggplot2 ggrepel gridExtra reshape2 tidyr]; };
  projectR = derive2 { name="projectR"; version="1.20.0"; sha256="1c9v4iw8s4hm7wjdv3ir6df0yskz95b0wnpljiph4zv4h22q32ac"; depends=[cluster cowplot dplyr fgsea ggalluvial ggplot2 ggrepel limma Matrix MatrixModels msigdbr NMF RColorBrewer reshape2 ROCR scales tsne umap viridis]; };
  protGear = derive2 { name="protGear"; version="1.8.0"; sha256="1wbdp7f55lbn0gcxgnp9xk0y5npn7jmk9vp7yq9v76j7f396vj2f"; depends=[Biobase data_table dplyr factoextra FactoMineR flexdashboard genefilter GGally ggplot2 ggpubr gtools htmltools Kendall knitr limma magrittr MASS pheatmap plotly plyr purrr readr remotes rlang rmarkdown shiny shinydashboard styler tibble tidyr vsn]; };
  proteinProfiles = derive2 { name="proteinProfiles"; version="1.44.0"; sha256="1dmy2cmjxclnml8bci6ihw5ak4ibgah4r17yzy9ypas0y457ff5c"; depends=[]; };
  psichomics = derive2 { name="psichomics"; version="1.30.0"; sha256="0nwfaw1a4mxdzqk0zqadxispdasx75nlb19zla753nmydxlpavj0"; depends=[AnnotationDbi AnnotationHub BiocFileCache cluster colourpicker data_table digest dplyr DT edgeR fastICA fastmatch ggplot2 ggrepel highcharter htmltools httr jsonlite limma pairsD3 plyr purrr R_utils Rcpp recount reshape2 Rfast shiny shinyBS shinyjs stringr SummarizedExperiment survival XML xtable]; };
  psygenet2r = derive2 { name="psygenet2r"; version="1.36.0"; sha256="1khjid5lkkn5qpnk9adw1in4km41q067mj5r5yqs2iz5hv4vx6xv"; depends=[BgeeDB Biobase biomaRt ggplot2 GO_db igraph labeling RCurl reshape2 stringr topGO]; };
  ptairMS = derive2 { name="ptairMS"; version="1.12.0"; sha256="0r0h4mdvhbrr3j78qzdcfw7q5q492wx9v78rg2xzw59ynqbyv3gg"; depends=[Biobase bit64 chron data_table doParallel DT enviPat foreach ggplot2 ggpubr gridExtra Hmisc minpack_lm MSnbase plotly Rcpp rhdf5 rlang scales shiny shinyscreenshot signal]; };
  puma = derive2 { name="puma"; version="3.46.0"; sha256="1l6xvj6l9f5kmff3a5q7vzf2sssyhkqpa4im46g53jhkindbqwg6"; depends=[affy affyio Biobase mclust oligo oligoClasses]; };
  pvac = derive2 { name="pvac"; version="1.52.0"; sha256="132hvlnp3cfxazvf0wq1q5v00q5x79fg60r7vsx07wi1vkjba3wg"; depends=[affy Biobase]; };
  pvca = derive2 { name="pvca"; version="1.44.0"; sha256="0bk1nrjhn78wcbcawz8bx2lm3y45mhfv22yrrlxrz91sah9jjw27"; depends=[Biobase lme4 Matrix vsn]; };
  pwOmics = derive2 { name="pwOmics"; version="1.36.0"; sha256="00c198vm7zzsq2a43c6iar5937556s65183wk1k7wy1zl8vqi8vg"; depends=[AnnotationDbi AnnotationHub Biobase BiocGenerics biomaRt data_table GenomicRanges gplots graph igraph rBiopaxParser STRINGdb]; };
  pwalign = derive2 { name="pwalign"; version="1.0.0"; sha256="1m0j1m5jif5spd9fkpzz3z3c9s8vwiy8xvpx8rz8igxj89rwrwb7"; depends=[BiocGenerics Biostrings IRanges S4Vectors XVector]; };
  qPLEXanalyzer = derive2 { name="qPLEXanalyzer"; version="1.22.0"; sha256="15cmfrp1hilqqkkxphd4lbqmk4mgv3s8ky76bnidfv58qc5pa940"; depends=[assertthat Biobase BiocGenerics Biostrings dplyr ggdendro ggplot2 IRanges limma magrittr MSnbase preprocessCore purrr RColorBrewer readr rlang scales stringr tibble tidyr tidyselect]; };
  qckitfastq = derive2 { name="qckitfastq"; version="1.20.0"; sha256="0wb6r4mdh3zf3hic88cn9s22s0dn7h65gl4djwrcl5sm5b1a6sxm"; depends=[data_table dplyr ggplot2 magrittr Rcpp reshape2 rlang RSeqAn seqTools zlibbioc]; };
  qcmetrics = derive2 { name="qcmetrics"; version="1.42.0"; sha256="0r7c67bjf9j7r9yciljx2sgnarrjaf1gazf6n8rjjar2jfmrsmrm"; depends=[Biobase knitr pander S4Vectors xtable]; };
  qmtools = derive2 { name="qmtools"; version="1.8.0"; sha256="1w0kd1kawf0w4rmlz8pfnabagrjvnyql2bcs2f7nl7sp6q7sfvni"; depends=[ggplot2 heatmaply igraph limma MsCoreUtils patchwork rlang scales SummarizedExperiment VIM]; };
  qpcrNorm = derive2 { name="qpcrNorm"; version="1.62.0"; sha256="1rcs9p5y50ynwmpxqwhigh9qxgs54shrglzjnakq08j24hxkyd2h"; depends=[affy Biobase limma]; };
  qpgraph = derive2 { name="qpgraph"; version="2.38.0"; sha256="040haanlhmd11isghcrdidf2nal4195kskp0q8965x41fbdvsx37"; depends=[annotate AnnotationDbi Biobase BiocParallel GenomeInfoDb GenomicFeatures GenomicRanges graph IRanges Matrix mvtnorm qtl Rgraphviz S4Vectors]; };
  qsea = derive2 { name="qsea"; version="1.30.0"; sha256="141fi7zk9czr4j1d0y1hk1hz33nq3k79cdkawp0x92nvja1n9njd"; depends=[BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicRanges gtools HMMcopy IRanges limma Rsamtools rtracklayer S4Vectors zoo]; };
  qsmooth = derive2 { name="qsmooth"; version="1.20.0"; sha256="16c7xjmgrqcklpirnwlqg92v4lj7f599ddl1w36xs8fmq7svz1lj"; depends=[Hmisc SummarizedExperiment sva]; };
  qsvaR = derive2 { name="qsvaR"; version="1.8.0"; sha256="1ijmh0mby6j50icwlcfhn416x0cjj5y0v3qqjmcn4hx6395m90ma"; depends=[ggplot2 SummarizedExperiment sva]; };
  quantiseqr = derive2 { name="quantiseqr"; version="1.12.0"; sha256="0d1afsz7hv4ixpicskzw564cq593jcfkix7rryq5lbj27rz5da3c"; depends=[Biobase ggplot2 limSolve MASS preprocessCore rlang SummarizedExperiment tidyr]; };
  quantro = derive2 { name="quantro"; version="1.38.0"; sha256="0b8afvnczkhmbdg5zna2h5v42zdyvk1zybn9cwcbw22rijiysq99"; depends=[Biobase doParallel foreach ggplot2 iterators minfi RColorBrewer]; };
  quantsmooth = derive2 { name="quantsmooth"; version="1.70.0"; sha256="1mgdrhq0j4b29l3y49h00ccwkz6vhs6hjb1236blmlzdf590q7gc"; depends=[quantreg]; };
  qusage = derive2 { name="qusage"; version="2.38.0"; sha256="06hj1nvp5j4zdqj9v0gc42fd3403phb4gibra4fc1sxzrhi9nq92"; depends=[Biobase emmeans fftw limma nlme]; };
  qvalue = derive2 { name="qvalue"; version="2.36.0"; sha256="1hgkrvbs1rf8db105ik9ar54zdx49v25hn71jgw7j5r43zngfg2a"; depends=[ggplot2 reshape2]; };
  r3Cseq = derive2 { name="r3Cseq"; version="1.50.0"; sha256="02dc6milwymwj90x24fip8av84ik9dp69sg9g7l300kwyk0hcrb7"; depends=[Biostrings data_table GenomeInfoDb GenomicRanges IRanges qvalue RColorBrewer Rsamtools rtracklayer sqldf VGAM]; };
  rBLAST = derive2 { name="rBLAST"; version="1.0.0"; sha256="1yhj08p6iyz2760j2z3v78mc4rzafd0lzfqprq3wd1v1bm34v3qb"; depends=[BiocFileCache Biostrings]; };
  rBiopaxParser = derive2 { name="rBiopaxParser"; version="2.44.0"; sha256="0hzs6i7l8n1hifj3b91n1f6z3l40jdcl1jlnz8z5qczk84266lx2"; depends=[data_table XML]; };
  rCGH = derive2 { name="rCGH"; version="1.34.0"; sha256="0241nrg1kcc6vxj1p6pp5gyjff7k3mdsr764bn3zxvh1wqjnvfrm"; depends=[aCGH affy AnnotationDbi DNAcopy GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 IRanges lattice limma mclust org_Hs_eg_db plyr shiny TxDb_Hsapiens_UCSC_hg18_knownGene TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Hsapiens_UCSC_hg38_knownGene]; };
  rDGIdb = derive2 { name="rDGIdb"; version="1.30.0"; sha256="1v96nj1ffmg1678p7rspcqsnqvwcssv96jcyqqbb8v8sryflwmi5"; depends=[httr jsonlite]; };
  rGADEM = derive2 { name="rGADEM"; version="2.52.0"; sha256="1d1vfnxj1p4y1074ybmkxv4x3v0i3sn5w3k4bddzlrqbzyb9kkna"; depends=[Biostrings BSgenome GenomicRanges IRanges seqLogo]; };
  rGREAT = derive2 { name="rGREAT"; version="2.6.0"; sha256="0sszyfnnzzn5xhs39zgkzr7f3da820nxr6qaw68wknblgmyyddi8"; depends=[AnnotationDbi circlize digest doParallel DT foreach GenomeInfoDb GenomicFeatures GenomicRanges GetoptLong GlobalOptions GO_db IRanges org_Hs_eg_db progress RColorBrewer Rcpp RCurl rjson S4Vectors shiny TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Hsapiens_UCSC_hg38_knownGene]; };
  rGenomeTracks = derive2 { name="rGenomeTracks"; version="1.10.0"; sha256="0a34xdmpj1872vxhd9a2k1rbzgvsmhisyy2pknbz606924k13xnz"; depends=[imager reticulate rGenomeTracksData]; };
  rRDP = derive2 { name="rRDP"; version="1.38.0"; sha256="00r8cii5gnnzd909alq7cn94b3df66w6bcd7pld1jvdphxwgvp3l"; depends=[Biostrings rJava]; };
  rSWeeP = derive2 { name="rSWeeP"; version="1.16.0"; sha256="0l9qpmbgq7pp0g3m2df881zif42d6dbbgkiri97zklndgyi035jp"; depends=[pracma]; };
  rScudo = derive2 { name="rScudo"; version="1.20.0"; sha256="0mhhv5p1z334qn92bql4rsd8p0xpnhd26kzahwi4wqkkb6yqbn8y"; depends=[Biobase BiocGenerics igraph S4Vectors stringr SummarizedExperiment]; };
  rTRM = derive2 { name="rTRM"; version="1.42.0"; sha256="016vhij3rc6sbhi7caxxnpps4w0w2n28x4hqwdxkxk6r0f6kkvla"; depends=[AnnotationDbi DBI igraph RSQLite]; };
  rTRMui = derive2 { name="rTRMui"; version="1.42.0"; sha256="0d5gxjiddy57cbryjdihqyf7nkd35apk41wkl1izp467il40mb75"; depends=[MotifDb org_Hs_eg_db org_Mm_eg_db rTRM shiny]; };
  rWikiPathways = derive2 { name="rWikiPathways"; version="1.24.0"; sha256="1m6djs70h58xs4323vp65j33i8mzql2sps9l04pgp28cs17yr4mc"; depends=[data_table dplyr httr lubridate purrr RCurl readr rjson stringr tidyr XML]; };
  raer = derive2 { name="raer"; version="1.2.0"; sha256="0fxc1i3p1ha0yn6s5c334q2bv7mfwjd3yvlvss6whi16vi63kbwj"; depends=[BiocGenerics BiocParallel Biostrings BSgenome cli GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges Matrix Rhtslib Rsamtools rtracklayer S4Vectors SingleCellExperiment SummarizedExperiment]; };
  rain = derive2 { name="rain"; version="1.38.0"; sha256="0wah5qiciwfcvdrii885dvsgbmq7lnjdpgdvzddprf6jwdsgq8w0"; depends=[gmp multtest]; };
  ramr = derive2 { name="ramr"; version="1.12.0"; sha256="096rxydr9qilg4lcczab1xlzv5ff2lq9r5l6bdzyhprm07mglc80"; depends=[BiocGenerics doParallel doRNG EnvStats ExtDist foreach GenomicRanges ggplot2 IRanges matrixStats reshape2 S4Vectors]; };
  ramwas = derive2 { name="ramwas"; version="1.28.0"; sha256="0azf24qvjy2dfizi0wp7lkrhjdm2xwwk6hmkg31ly501cjd4pn9s"; depends=[BiocGenerics biomaRt Biostrings digest filematrix GenomicAlignments glmnet KernSmooth Rsamtools]; };
  randPack = derive2 { name="randPack"; version="1.50.0"; sha256="0byix4ipmd9wnknbzm4pjqp09yh9fa4cjky94p3l1gnbmg8kw48j"; depends=[Biobase]; };
  randRotation = derive2 { name="randRotation"; version="1.16.0"; sha256="1wi9i8ssan3pfjikbjj5m3rs8lv52jdih0pxfk0rzahqak8m82db"; depends=[Rdpack]; };
  rawDiag = derive2 { name="rawDiag"; version="1.0.0"; sha256="1rdccg67gkcxj7jgg0by1244x3794kz4s60l5ps54j41iy3zs0v2"; depends=[BiocManager BiocParallel dplyr ggplot2 hexbin htmltools rawrr reshape2 rlang scales shiny]; };
  rawrr = derive2 { name="rawrr"; version="1.12.0"; sha256="1h8q9j8qiqrmk41j567dq53i1mbm89c9gcj9p8qjqcrjcvykg89f"; depends=[]; };
  rbsurv = derive2 { name="rbsurv"; version="2.62.0"; sha256="1hj569n72bds094dfnr8bpfx1ca0sn4bax8lnjz03yz08kmrv8a6"; depends=[Biobase survival]; };
  rcellminer = derive2 { name="rcellminer"; version="2.26.0"; sha256="0dxg050rw9p88hdv55v60fg2ijjl1dnzxq47xy60nrzpijcb3770"; depends=[Biobase ggplot2 gplots rcellminerData shiny stringr]; };
  rebook = derive2 { name="rebook"; version="1.14.0"; sha256="0v59wr8862phlv4byy3j3l0spm7450vz218xffgwlkwixzw3hnnk"; depends=[BiocStyle CodeDepends dir_expiry filelock knitr rmarkdown]; };
  receptLoss = derive2 { name="receptLoss"; version="1.16.0"; sha256="1c110rpfbi6rgl97659qx5qyj6wp6sqzddpnjg3bir21nh6902fl"; depends=[dplyr ggplot2 magrittr SummarizedExperiment tidyr]; };
  reconsi = derive2 { name="reconsi"; version="1.16.0"; sha256="13xviw2qn8sk7ka6qskb39dsv9qz4vkfdydpzzvm14y6iy62zgzr"; depends=[ggplot2 ks Matrix matrixStats phyloseq reshape2]; };
  recount = derive2 { name="recount"; version="1.30.2"; sha256="0fdnp0ilvxkzyzwblbchf6ns1v6fah32zyg3y68pz88ir5nwg49b"; depends=[BiocParallel derfinder downloader GenomeInfoDb GenomicRanges GEOquery IRanges RCurl rentrez rtracklayer S4Vectors SummarizedExperiment]; };
  recount3 = derive2 { name="recount3"; version="1.14.0"; sha256="1dmc5s5mw95caq2pqpgik5z5nggy5mnas1dawssiyhr10wivnjd0"; depends=[BiocFileCache data_table GenomicRanges httr Matrix R_utils rtracklayer S4Vectors sessioninfo SummarizedExperiment]; };
  recountmethylation = derive2 { name="recountmethylation"; version="1.14.0"; sha256="0cbp1cz6h1djwgrv2achgypmxiracrjm8y8sj1f9iqy6i1fgq8jl"; depends=[basilisk BiocFileCache DelayedMatrixStats HDF5Array minfi R_utils RCurl reticulate rhdf5 S4Vectors]; };
  recoup = derive2 { name="recoup"; version="1.32.0"; sha256="07313l0b78x0m0vp8ipngzv069v7vjgr8q7vv4j9kbr33kql3bp6"; depends=[BiocGenerics biomaRt Biostrings circlize ComplexHeatmap GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 httr IRanges Rsamtools RSQLite rtracklayer S4Vectors stringr txdbmaker]; };
  regionReport = derive2 { name="regionReport"; version="1.38.0"; sha256="1nxs0slhhnxpjg220irf0a6hsh1zp0xh54ffpvl25lzgy422xwpp"; depends=[BiocStyle DEFormats derfinder DESeq2 GenomeInfoDb GenomicRanges knitr knitrBootstrap RefManageR rmarkdown S4Vectors SummarizedExperiment]; };
  regionalpcs = derive2 { name="regionalpcs"; version="1.2.0"; sha256="1hrmxb2ag0d823kn3ya07rwgfv931x2shqzdq3q310rw9jllcwgd"; depends=[dplyr GenomicRanges PCAtools tibble]; };
  regioneR = derive2 { name="regioneR"; version="1.36.0"; sha256="1ygdlqvhf165mqd247783pi1yzidqap8b913444vrs881n62xvrb"; depends=[Biostrings BSgenome GenomeInfoDb GenomicRanges IRanges memoise rtracklayer S4Vectors]; };
  regioneReloaded = derive2 { name="regioneReloaded"; version="1.6.0"; sha256="1yi97sarqljayqm5lwci0z768qk0vzqiazpx8j6lvpsqhrsgmcry"; depends=[cluster ggplot2 ggrepel RColorBrewer regioneR reshape2 Rtsne scales umap]; };
  regsplice = derive2 { name="regsplice"; version="1.30.0"; sha256="0cmqigb2klpq7nqvhmvmyf9xzgjfvw22zpgpcjnlv24ga30sacak"; depends=[edgeR glmnet limma pbapply S4Vectors SummarizedExperiment]; };
  regutools = derive2 { name="regutools"; version="1.16.0"; sha256="1ypy9nrafnr7ri4a2cz5akm78cdq0qahlmbcs8ylr97bimkdandk"; depends=[AnnotationDbi AnnotationHub BiocFileCache Biostrings DBI GenomicRanges Gviz IRanges RCy3 RSQLite S4Vectors]; };
  retrofit = derive2 { name="retrofit"; version="1.4.0"; sha256="1dx2yfz7f18sknl75igmfzk3nfrp28pjkbkpn1w6zx1sbj6dbxsl"; depends=[Rcpp]; };
  rexposome = derive2 { name="rexposome"; version="1.26.0"; sha256="13ivwypcw58bmlrps16anhxf0dxk8v16wyadwz4wds4rd0ihjvcz"; depends=[Biobase circlize corrplot FactoMineR ggplot2 ggrepel ggridges glmnet gplots gridExtra gtools Hmisc imputeLCMD lme4 lsr mice pryr reshape2 S4Vectors scales scatterplot3d stringr]; };
  rfPred = derive2 { name="rfPred"; version="1.42.0"; sha256="02clazsix7n4nnz1kn7hkk48fggxp2bqf97xbzngnljskvlhnakb"; depends=[data_table GenomeInfoDb GenomicRanges IRanges Rsamtools]; };
  rfaRm = derive2 { name="rfaRm"; version="1.16.0"; sha256="1c8kpcbwkz33cbc8xqfd5cqj1n979a9ijbj06nfgylkm71ma1682"; depends=[Biostrings data_table httr IRanges jsonlite magick rsvg rvest S4Vectors stringi xml2]; };
  rgoslin = derive2 { name="rgoslin"; version="1.8.0"; sha256="0saxw5kppcw0hwjykgzx8873izbl509hq1ga8w9qg2c5zx5xahk9"; depends=[dplyr Rcpp]; };
  rgsepd = derive2 { name="rgsepd"; version="1.36.0"; sha256="18r2naxir299k0gcd9j3a5rvdma590m06v38j8wiligsgw5cmkfg"; depends=[AnnotationDbi biomaRt DESeq2 GO_db goseq gplots org_Hs_eg_db SummarizedExperiment]; };
  rhdf5 = derive2 { name="rhdf5"; version="2.48.0"; sha256="086bnwzmlwq3z9a4kb1rnzb2wnchhi4gvzpijhladgd83nqyb0wn"; depends=[rhdf5filters Rhdf5lib]; };
  rhdf5client = derive2 { name="rhdf5client"; version="1.26.0"; sha256="17c8r361za3760lkik2b88c3m8zska33qam2iwbl5hw9yhkrl6ck"; depends=[data_table DelayedArray httr rjson]; };
  rhdf5filters = derive2 { name="rhdf5filters"; version="1.16.0"; sha256="0fsfp34pfb5k030j7nfx9b9vsil02y85sv1dd1y0bfdxchi4bw8x"; depends=[Rhdf5lib]; };
  riboSeqR = derive2 { name="riboSeqR"; version="1.38.0"; sha256="0p0q28n8hlai80pxxns9pzzg552pbwlxlph8zjf78bwbjagrfbz5"; depends=[abind baySeq GenomeInfoDb GenomicRanges IRanges Rsamtools S4Vectors seqLogo]; };
  ribor = derive2 { name="ribor"; version="1.16.0"; sha256="0kymbmm96a7ccl0dz46sk0lzgf3n55qvdkywkj91kh0ddrsji0vi"; depends=[dplyr ggplot2 hash rhdf5 rlang S4Vectors tidyr yaml]; };
  ribosomeProfilingQC = derive2 { name="ribosomeProfilingQC"; version="1.16.0"; sha256="0bblk7ncxdrbgmgcjvif9zgd1ynlh4205vlmgr42jbg5p1i7p3in"; depends=[AnnotationDbi BiocGenerics Biostrings BSgenome cluster EDASeq GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggExtra ggfittext ggplot2 ggrepel IRanges motifStack Rsamtools Rsubread rtracklayer RUVSeq S4Vectors scales txdbmaker XVector]; };
  rifi = derive2 { name="rifi"; version="1.8.0"; sha256="0yajsqm27zy5imb719x8knsrn9rk85q98wc65xqmvj9bkqkjfvdl"; depends=[car cowplot doMC dplyr egg foreach ggplot2 nls2 nnet reshape2 rlang rtracklayer S4Vectors scales stringr SummarizedExperiment tibble]; };
  rifiComparative = derive2 { name="rifiComparative"; version="1.4.0"; sha256="0isgcbmk7c99xhlasaaa2gyjf9827zfdq1vyf4xc21lyhv9q5j51"; depends=[cowplot devtools doMC dplyr DTA egg foreach ggplot2 ggrepel LSD nnet reshape2 rlang rtracklayer S4Vectors scales stringr SummarizedExperiment tibble writexl]; };
  rmelting = derive2 { name="rmelting"; version="1.20.0"; sha256="1rk27wg4j8hldmrzcjymw3hhaq9cm4bjz5fqwjzx8kdrs94wwrid"; depends=[Rdpack rJava]; };
  rmspc = derive2 { name="rmspc"; version="1.10.0"; sha256="0f9l8gbbd81ac871fbpknyxsjwy9l1xz3nfbvnic012gg33n6j4y"; depends=[BiocManager GenomicRanges processx rtracklayer stringr]; };
  rnaEditr = derive2 { name="rnaEditr"; version="1.14.0"; sha256="1jghirl1iz11wm4sq8qvw2fvgha7q6ili6bddgpdfcn07abbkcsm"; depends=[BiocGenerics bumphunter corrplot GenomeInfoDb GenomicRanges IRanges logistf plyr S4Vectors survival]; };
  rnaseqcomp = derive2 { name="rnaseqcomp"; version="1.34.0"; sha256="00lv24xxf9644gikb76wwk9bijfa3frpwb4n0cbq5fsx0b1288rs"; depends=[RColorBrewer]; };
  roar = derive2 { name="roar"; version="1.40.0"; sha256="06d1w5kknm2mb6v6glmyd97n1a33529kgqkkyfbk277ikn45hi9f"; depends=[BiocGenerics GenomeInfoDb GenomicAlignments GenomicRanges IRanges rtracklayer S4Vectors SummarizedExperiment]; };
  roastgsa = derive2 { name="roastgsa"; version="1.2.0"; sha256="00rxmlx94y03mkz5jbwqx4px1cwv63nblhj2yxidy2k5374fk7fy"; depends=[Biobase ggplot2 gplots limma RColorBrewer]; };
  rols = derive2 { name="rols"; version="3.0.0"; sha256="04kpfb0vavlkxirl9hgl6wdqhy6kw6ly3fyk0jr85kdzdb8ss1xd"; depends=[Biobase BiocGenerics httr2 jsonlite]; };
  ropls = derive2 { name="ropls"; version="1.36.0"; sha256="0cdkwzrbr6h1dfi3qdh629hi2jlm1hxgq4dvx4z3vc2r6w0c6m11"; depends=[Biobase ggplot2 MultiAssayExperiment MultiDataSet plotly SummarizedExperiment]; };
  rprimer = derive2 { name="rprimer"; version="1.8.0"; sha256="04maldspcfzszvbgvzq4fmaf62639kb2rs2dqm9r9miqqxqndkr3"; depends=[Biostrings bslib DT ggplot2 IRanges mathjaxr patchwork reshape2 S4Vectors shiny shinycssloaders shinyFeedback]; };
  rpx = derive2 { name="rpx"; version="2.12.0"; sha256="1a3rh2f9wwgcgadgb5ryj8vs9kcyhqwz7wdnykv2pl3pgm8ba2zp"; depends=[BiocFileCache curl jsonlite RCurl xml2]; };
  rqubic = derive2 { name="rqubic"; version="1.50.0"; sha256="1hr0i7f8987x79ir34yg65bzkd7lij03rkfmw6dr289d8kjclap2"; depends=[biclust Biobase BiocGenerics]; };
  rrvgo = derive2 { name="rrvgo"; version="1.16.0"; sha256="1339cxx5sizbdhhya1kxq9x31m2qvdl993abr4pn07hs3awya63p"; depends=[AnnotationDbi ggplot2 ggrepel GO_db GOSemSim pheatmap shiny tm treemap umap wordcloud]; };
  rsbml = derive2 { name="rsbml"; version="2.62.0"; sha256="02pmxg0ppy1asjscp13kmqyj2phw4q138fj2b3xgmcagwxqzb4bs"; depends=[BiocGenerics graph]; };
  rsemmed = derive2 { name="rsemmed"; version="1.14.0"; sha256="12m771wipjr823k88f38waqsm1nq7qig7200969g2dz8fiaaxjxx"; depends=[dplyr igraph magrittr stringr]; };
  rtracklayer = derive2 { name="rtracklayer"; version="1.64.0"; sha256="0h2cqr1jqqqxvkmqpngfl8ppm1p65vvlb1wgfwl9r4f99b8vz33g"; depends=[BiocGenerics BiocIO Biostrings curl GenomeInfoDb GenomicAlignments GenomicRanges httr IRanges restfulr Rsamtools S4Vectors XML XVector zlibbioc]; };
  runibic = derive2 { name="runibic"; version="1.26.0"; sha256="0q25b2dfgp82p156l37zzl5a842ah3hzq60f9gkcv4vqkns99z64"; depends=[biclust Rcpp SummarizedExperiment testthat]; };
  sRACIPE = derive2 { name="sRACIPE"; version="1.20.0"; sha256="0kkfci9mifhb905c88cyfvwy6yacb1ar0ai6lcxhyx60bwnv6x7i"; depends=[BiocGenerics ggplot2 gplots gridExtra htmlwidgets MASS RColorBrewer Rcpp reshape2 S4Vectors SummarizedExperiment umap visNetwork]; };
  sSNAPPY = derive2 { name="sSNAPPY"; version="1.8.0"; sha256="0ij3f7xax92jihzhf6axx7sq36jcnvyjfhgan1m1mcsaandb4d4k"; depends=[dplyr edgeR ggforce ggplot2 ggraph graphite gtools igraph magrittr org_Hs_eg_db pheatmap reshape2 rlang stringr SummarizedExperiment tibble tidyr]; };
  sSeq = derive2 { name="sSeq"; version="1.42.0"; sha256="08wjz54qsgdwbf3rscb8mzqx2ffm62dm589zj4hflb1ayhgza2ai"; depends=[caTools RColorBrewer]; };
  safe = derive2 { name="safe"; version="3.44.0"; sha256="1kxl9rqqpnihz5rhgv07q0vgqxpams4iyf2w11ffv59b2gi1brrr"; depends=[AnnotationDbi Biobase SparseM]; };
  sagenhaft = derive2 { name="sagenhaft"; version="1.74.0"; sha256="1gqil6dqjrqlxnj8sfhwi2izmqcj9i6id3wfskvkn3xw12hk3cnp"; depends=[SparseM]; };
  sampleClassifier = derive2 { name="sampleClassifier"; version="1.28.0"; sha256="12c8di5xw7q3a78z75labq3qzwsnk7s1xr5c75xsy8k2f04npn0z"; depends=[annotate e1071 ggplot2 MGFM MGFR]; };
  sangeranalyseR = derive2 { name="sangeranalyseR"; version="1.14.0"; sha256="1l5capnvhd78lzaiv44q9qiw9vdlnygmflmrqyv3ck3qk59hwsaw"; depends=[ape BiocStyle Biostrings data_table DECIPHER DT excelR ggdendro gridExtra knitr logger openxlsx plotly pwalign reshape2 rmarkdown sangerseqR seqinr shiny shinycssloaders shinydashboard shinyjs shinyWidgets stringr zeallot]; };
  sangerseqR = derive2 { name="sangerseqR"; version="1.40.0"; sha256="01z2b7950yxhv8p73rfmq84bscrlpl956ihfyarnzdq9v9ljzzd9"; depends=[Biostrings pwalign shiny stringr]; };
  sarks = derive2 { name="sarks"; version="1.16.0"; sha256="1ayfxfgk1zwmychdlhbq3can76swa127z5r587frs3c23zbm8qi2"; depends=[binom Biostrings cluster IRanges rJava]; };
  saseR = derive2 { name="saseR"; version="1.0.0"; sha256="1ibr75zm09h9cwzizljlv33s09y2jz2fasnblhmm59xdb8gwl7vg"; depends=[ASpli BiocGenerics BiocParallel data_table DESeq2 DEXSeq dplyr edgeR GenomicAlignments GenomicFeatures GenomicRanges igraph IRanges knitr limma MASS MatrixGenerics pracma precrec PRROC rrcov S4Vectors SummarizedExperiment]; };
  satuRn = derive2 { name="satuRn"; version="1.12.0"; sha256="03mlb4j219w8760zm5hnryjwxns3qz9y3wl6zaqdfnl94bwyl9r8"; depends=[BiocParallel boot ggplot2 limma locfdr Matrix pbapply SummarizedExperiment]; };
  scAnnotatR = derive2 { name="scAnnotatR"; version="1.10.0"; sha256="1gzssp7im1d9pp2mbar27k854fcc3rqyza5d77flmhshq88xrskv"; depends=[AnnotationHub ape caret data_tree dplyr e1071 ggplot2 kernlab pROC ROCR Seurat SingleCellExperiment SummarizedExperiment]; };
  scBFA = derive2 { name="scBFA"; version="1.18.0"; sha256="0zq4xnvzlprhlv2n7d41ikms6cmwvm51sn3f61841ch6hdfai7my"; depends=[copula DESeq2 ggplot2 MASS Matrix Seurat SingleCellExperiment SummarizedExperiment zinbwave]; };
  scBubbletree = derive2 { name="scBubbletree"; version="1.6.0"; sha256="0adzmw4bzs1a857bwwq63niwgn5wm3mdqxbqhily49h7yxnf3rv7"; depends=[ape future future_apply ggplot2 ggtree patchwork proxy reshape2 scales Seurat]; };
  scCB2 = derive2 { name="scCB2"; version="1.14.0"; sha256="1iwcx1wra4f3lnqsmbs5m0agd6ffmpmdwn767n8q0qgvy8sdjaw0"; depends=[doParallel DropletUtils edgeR foreach iterators Matrix rhdf5 Seurat SingleCellExperiment SummarizedExperiment]; };
  scDD = derive2 { name="scDD"; version="1.28.0"; sha256="106hawmyln6xj9m2npibb4lkd8qvz60lwjabhn3cpx3908x88ryb"; depends=[arm BiocParallel EBSeq fields ggplot2 mclust outliers S4Vectors scran SingleCellExperiment SummarizedExperiment]; };
  scDDboost = derive2 { name="scDDboost"; version="1.6.0"; sha256="0q4vrrcnnhwb3r9jn13d1wsjn9mxai39pxaa9lf6zmg1v17aqmhg"; depends=[BH BiocParallel cluster EBSeq ggplot2 mclust Oscope Rcpp RcppEigen SingleCellExperiment SummarizedExperiment]; };
  scDataviz = derive2 { name="scDataviz"; version="1.14.0"; sha256="1njm8ym44ml51sbz001niclmkl4q78yid8ik76j9xnwldd9cb2c8"; depends=[corrplot flowCore ggplot2 ggrepel MASS matrixStats RColorBrewer reshape2 S4Vectors scales Seurat SingleCellExperiment umap]; };
  scDblFinder = derive2 { name="scDblFinder"; version="1.18.0"; sha256="1np3arhjxxgif68i0wi0nqqbrwavy14dh9vy2g9mw4408k7789w0"; depends=[BiocGenerics BiocNeighbors BiocParallel BiocSingular bluster DelayedArray GenomeInfoDb GenomicRanges igraph IRanges MASS Matrix Rsamtools rtracklayer S4Vectors scater scran scuttle SingleCellExperiment SummarizedExperiment xgboost]; };
  scDesign3 = derive2 { name="scDesign3"; version="1.2.0"; sha256="0jf8g5llkcashxsjsm39fivdqpyjx40gn362yzpwcfh81f4x95x1"; depends=[BiocParallel coop dplyr gamlss gamlss_dist ggplot2 irlba Matrix matrixStats mclust mgcv mvtnorm pbmcapply rvinecopulib SingleCellExperiment sparseMVN SummarizedExperiment tibble umap viridis]; };
  scFeatureFilter = derive2 { name="scFeatureFilter"; version="1.24.0"; sha256="1lxgk9dki9l4qjgm3myqrjg59a4avd2h6phaibxk28rsh7agzw5h"; depends=[dplyr ggplot2 magrittr rlang tibble]; };
  scFeatures = derive2 { name="scFeatures"; version="1.4.0"; sha256="178xpi6r1avbp4g9v5yd46jhnra6md47mljpn9y8a5991wh0rc4i"; depends=[ape AUCell BiocParallel cli DelayedArray DelayedMatrixStats dplyr DT EnsDb_Hsapiens_v79 EnsDb_Mmusculus_v79 ensembldb glue GSVA gtools MatrixGenerics msigdbr proxyC reshape2 rmarkdown Seurat SingleCellSignalR spatstat_explore spatstat_geom tidyr]; };
  scGPS = derive2 { name="scGPS"; version="1.18.0"; sha256="1l4rn2amrgih6fi3dshxdjgmvimv93qfan6asy77lgaf8vwa7rlh"; depends=[caret DESeq2 dplyr dynamicTreeCut fastcluster ggplot2 glmnet locfit Rcpp RcppArmadillo RcppParallel SingleCellExperiment SummarizedExperiment]; };
  scHOT = derive2 { name="scHOT"; version="1.16.0"; sha256="07sk0yn5ji2avhmdwyzdl466pqncvij1zf0yicw5lpb62f1ac446"; depends=[BiocParallel ggforce ggplot2 igraph IRanges Matrix reshape S4Vectors SingleCellExperiment SummarizedExperiment]; };
  scMET = derive2 { name="scMET"; version="1.6.0"; sha256="1v0x40720npv2c468mhydycrhff9bz2c8m35n3j4y7bja05qaazx"; depends=[assertthat BH BiocStyle coda cowplot data_table dplyr ggplot2 logitnorm MASS Matrix matrixStats Rcpp RcppEigen RcppParallel rstan rstantools S4Vectors SingleCellExperiment StanHeaders SummarizedExperiment VGAM viridis]; };
  scMerge = derive2 { name="scMerge"; version="1.20.0"; sha256="0v344a2r7hw0x3b3192796sa922sc3jgi7z7pzbx6pcn4c5c9zw4"; depends=[batchelor BiocNeighbors BiocParallel BiocSingular cluster cvTools DelayedArray DelayedMatrixStats distr igraph M3Drop proxyC ruv S4Vectors scater scran SingleCellExperiment SummarizedExperiment]; };
  scMitoMut = derive2 { name="scMitoMut"; version="1.0.0"; sha256="143h22x71pgmzky1z6g6qvqq1qcb1852341sfsv4dwj2w5j00njm"; depends=[data_table ggplot2 magrittr pheatmap plyr RColorBrewer Rcpp RcppArmadillo readr rhdf5 stringr zlibbioc]; };
  scMultiSim = derive2 { name="scMultiSim"; version="1.0.0"; sha256="16kdxksszq0zhl7z1xavsr5s5fq9259g86pfbg2bqdwqhl1xgf70"; depends=[ape assertthat crayon dplyr foreach ggplot2 gplots igraph KernelKnn markdown MASS matrixStats phytools rlang Rtsne SummarizedExperiment zeallot]; };
  scPCA = derive2 { name="scPCA"; version="1.18.0"; sha256="00lfwv1l9w9wjqqpgy9hx2sxb7lps7av3lpr5670c2ncf30jm68m"; depends=[assertthat BiocParallel cluster coop DelayedArray dplyr elasticnet kernlab Matrix MatrixGenerics matrixStats origami purrr Rdpack RSpectra ScaledMatrix sparsepca stringr tibble]; };
  scPipe = derive2 { name="scPipe"; version="2.4.0"; sha256="0n786qxxkfiag88fi4bsf9vgmvx179cxfah6sld5ij34vq224809"; depends=[AnnotationDbi basilisk BiocGenerics biomaRt Biostrings data_table dplyr DropletUtils flexmix GenomicAlignments GenomicRanges GGally ggplot2 glue hash IRanges magrittr MASS Matrix mclust MultiAssayExperiment org_Hs_eg_db org_Mm_eg_db purrr Rcpp reshape reticulate Rhtslib rlang robustbase Rsamtools Rsubread rtracklayer S4Vectors scales SingleCellExperiment stringr SummarizedExperiment testthat tibble tidyr vctrs zlibbioc]; };
  scRNAseqApp = derive2 { name="scRNAseqApp"; version="1.4.0"; sha256="19wwsmslhya3m5qmqyg6pmm510r0zrh8480h1z8b7jcmkkhyla81"; depends=[bibtex bslib circlize ComplexHeatmap data_table DBI DT GenomeInfoDb GenomicRanges ggdendro ggforce ggplot2 ggrepel ggridges gridExtra htmltools IRanges jsonlite magrittr patchwork plotly RColorBrewer RefManageR rhdf5 Rsamtools RSQLite rtracklayer S4Vectors scales scrypt Seurat SeuratObject shiny shinyhelper shinymanager SingleCellExperiment slingshot sortable xfun xml2]; };
  scReClassify = derive2 { name="scReClassify"; version="1.10.0"; sha256="1m7l19kyfnwzk2wcmc9v5xmssfx1nm4v00z986s4xx7mhhx05dki"; depends=[e1071 randomForest SingleCellExperiment SummarizedExperiment]; };
  scRecover = derive2 { name="scRecover"; version="1.20.0"; sha256="0nxxsgm7sr4mlskgflbf3xi322j67zfdvbk6vxwwp5bxil2r0m13"; depends=[bbmle BiocParallel doParallel foreach gamlss kernlab MASS Matrix penalized preseqR pscl rsvd SAVER]; };
  scRepertoire = derive2 { name="scRepertoire"; version="2.0.0"; sha256="1ifnyfzswisacvxxf041l1snfv1b8x30pjg2pwampg804c56f1wj"; depends=[cubature dplyr evmix ggalluvial ggdendro ggplot2 ggraph hash igraph iNEXT plyr quantreg Rcpp reshape2 rjson rlang S4Vectors SeuratObject SingleCellExperiment stringdist stringr SummarizedExperiment tidygraph truncdist VGAM]; };
  scShapes = derive2 { name="scShapes"; version="1.10.0"; sha256="003948wggm6hss2yl9hizil0jv78yd3jipvrs9js8c93fp78cbrw"; depends=[BiocParallel dgof emdbook magrittr MASS Matrix pscl VGAM]; };
  scTGIF = derive2 { name="scTGIF"; version="1.18.0"; sha256="13sj8gqmjaq2qcap7dh8gb2di4v59qw3g7l7ryc7crfmj7c9wipd"; depends=[Biobase BiocStyle ggplot2 GSEABase igraph knitr msigdbr nnTensor plotly RColorBrewer Rcpp rmarkdown S4Vectors scales schex SingleCellExperiment SummarizedExperiment tagcloud tibble]; };
  scTHI = derive2 { name="scTHI"; version="1.16.0"; sha256="0p9k1fh4k2gqv326vfxshmcwsqpyz5zhsr0xnzw9iz7rykpf7m81"; depends=[BiocParallel Rtsne]; };
  scTensor = derive2 { name="scTensor"; version="2.14.0"; sha256="1s4ayn2wx63zfqj6vh2zmnb6a3khwfwq5s7jsllgdwcxq8039i11"; depends=[abind AnnotationDbi AnnotationHub BiocManager BiocStyle Category ccTensor checkmate crayon DOSE ggplot2 GOstats heatmaply igraph knitr MeSHDbi meshr nnTensor outliers plotly plotrix reactome_db ReactomePA rmarkdown RSQLite rTensor S4Vectors schex SingleCellExperiment SummarizedExperiment tagcloud visNetwork]; };
  scTreeViz = derive2 { name="scTreeViz"; version="1.10.0"; sha256="1vmqd4bml6ikpbbd90kqrrfhi1bkv9vdjlxcai588807vcckg54a"; depends=[clustree data_table digest epivizr epivizrData epivizrServer ggplot2 ggraph httr igraph Matrix Rtsne S4Vectors scater scran Seurat SingleCellExperiment SummarizedExperiment sys]; };
  scanMiR = derive2 { name="scanMiR"; version="1.10.0"; sha256="1nmkfpkvq3qbgnql8c7glmxjyszwqp546v1ah78crnn3lnqkdchx"; depends=[BiocParallel Biostrings cowplot data_table GenomeInfoDb GenomicRanges ggplot2 IRanges pwalign S4Vectors seqLogo stringi]; };
  scanMiRApp = derive2 { name="scanMiRApp"; version="1.10.0"; sha256="12id6sla58gk1xj56vh7aamkrplx85f2am58brq3p384z5inx9kj"; depends=[AnnotationDbi AnnotationFilter AnnotationHub BiocParallel Biostrings data_table digest DT ensembldb fst GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 htmlwidgets IRanges Matrix plotly rintrojs rtracklayer S4Vectors scanMiR scanMiRData shiny shinycssloaders shinydashboard shinyjqui txdbmaker waiter]; };
  scater = derive2 { name="scater"; version="1.32.0"; sha256="096crwk5a9i7h2pykyi6vgnrnxas9wdz5dx920yh74smyh527jiq"; depends=[beachmat BiocGenerics BiocNeighbors BiocParallel BiocSingular DelayedArray ggbeeswarm ggplot2 ggrastr ggrepel Matrix MatrixGenerics pheatmap RColorBrewer RcppML rlang Rtsne S4Vectors scuttle SingleCellExperiment SummarizedExperiment uwot viridis]; };
  scatterHatch = derive2 { name="scatterHatch"; version="1.10.0"; sha256="1pxax6kyh5izn00g3vp1b94zcsm1qg7sq2f307zg8v3i53sajl54"; depends=[ggplot2 plyr spatstat_geom]; };
  sccomp = derive2 { name="sccomp"; version="1.8.0"; sha256="1dgv5pyf765p84i070fwdmhj1878rcimzjd6n3kx8j5r7mv10ff5"; depends=[BH boot dplyr forcats ggplot2 ggrepel glue lifecycle magrittr patchwork purrr Rcpp RcppEigen RcppParallel readr rlang rstan rstantools scales SeuratObject SingleCellExperiment StanHeaders stringr tibble tidyr tidyselect]; };
  scde = derive2 { name="scde"; version="2.32.0"; sha256="0s54h3p8kvlk7imv8w8m1gwslyahn6jrggpkbgga5z7mqakvag6c"; depends=[BiocParallel Cairo edgeR extRemes flexmix MASS mgcv nnet pcaMethods quantreg RColorBrewer Rcpp RcppArmadillo rjson RMTstat Rook]; };
  scds = derive2 { name="scds"; version="1.20.0"; sha256="19xma4kmx8s6m6dvqyw461ahqyfqb7z3n5dz4ppab4xcpmqvx0vh"; depends=[dplyr Matrix pROC S4Vectors SingleCellExperiment SummarizedExperiment xgboost]; };
  schex = derive2 { name="schex"; version="1.18.0"; sha256="1wb3sksxvj08zqg34scwg1xrzj3hdk2jmyqswd03cjppyjy3ysq6"; depends=[cluster concaveman dplyr entropy ggforce ggplot2 hexbin rlang SingleCellExperiment]; };
  scider = derive2 { name="scider"; version="1.2.0"; sha256="0i1p5pf6jc2f39cfmi5d8ifc7lb5n7m7k0lkgif5vhm2z4nfhrnf"; depends=[ggplot2 igraph isoband janitor knitr lwgeom pheatmap plotly rlang S4Vectors sf shiny SpatialExperiment spatstat_explore spatstat_geom SummarizedExperiment]; };
  scifer = derive2 { name="scifer"; version="1.6.0"; sha256="022dn1492hjiyxxq0mqhvs299lgzg26jik7y5brh0i0ajj1j63fv"; depends=[Biostrings data_table DECIPHER dplyr flowCore ggplot2 gridExtra kableExtra knitr plyr rlang rmarkdown sangerseqR scales stringr tibble]; };
  scmap = derive2 { name="scmap"; version="1.26.0"; sha256="0acy3sg4j36znsfxpkb190wbawbngx15cr5x2lhgrjivvw3637x1"; depends=[Biobase BiocGenerics dplyr e1071 ggplot2 googleVis matrixStats proxy randomForest Rcpp RcppArmadillo reshape2 S4Vectors SingleCellExperiment SummarizedExperiment]; };
  scmeth = derive2 { name="scmeth"; version="1.24.0"; sha256="1yrww6b0lnh4831iw9adjimdazfa3f1w66pypzi99ywdcbdyksg8"; depends=[AnnotationHub annotatr Biostrings BSgenome bsseq DelayedArray DT GenomeInfoDb GenomicRanges HDF5Array knitr reshape2 rmarkdown SummarizedExperiment]; };
  scone = derive2 { name="scone"; version="1.28.0"; sha256="1qvnc6cds3avxh1k4z47vb2fih7q8a5b9hccnyrpfks5c0sd6yi0"; depends=[aroma_light BiocParallel boot class cluster compositions diptest edgeR fpc gplots hexbin limma MatrixGenerics matrixStats mixtools rARPACK RColorBrewer rhdf5 RUVSeq SingleCellExperiment SummarizedExperiment]; };
  scoreInvHap = derive2 { name="scoreInvHap"; version="1.26.0"; sha256="0sdawb2xsrwyqsk18rfzpk7f5ryl3pznawz3b6v5s143vg3d7s84"; depends=[BiocParallel Biostrings GenomicRanges snpStats SummarizedExperiment VariantAnnotation]; };
  scp = derive2 { name="scp"; version="1.14.0"; sha256="1b8hfvjpvni672qz6y53sy2wxbrn8anpanjd9qnixxisg94c66qj"; depends=[dplyr ggplot2 ggrepel IHW matrixStats metapod MsCoreUtils MultiAssayExperiment nipals QFeatures RColorBrewer S4Vectors SingleCellExperiment SummarizedExperiment]; };
  scran = derive2 { name="scran"; version="1.32.0"; sha256="0s1y2q4v596wxh8p5sr43mk9cnsc4kg36ld7vx71hbn3hwscqaa1"; depends=[beachmat BH BiocGenerics BiocParallel BiocSingular bluster DelayedArray DelayedMatrixStats dqrng edgeR igraph limma Matrix metapod Rcpp S4Vectors scuttle SingleCellExperiment statmod SummarizedExperiment]; };
  screenCounter = derive2 { name="screenCounter"; version="1.4.0"; sha256="0xq6ay76lnbbdibvyvkfk0nb8i8hxmvnxb4gfi2sj4ggsrz49rcz"; depends=[BiocParallel Rcpp S4Vectors SummarizedExperiment zlibbioc]; };
  scruff = derive2 { name="scruff"; version="1.22.0"; sha256="0gw8xj4agiz1j5lwp5zpa6m5k9wkkzrvcyzrrnqva1768v8123vb"; depends=[AnnotationDbi BiocGenerics BiocParallel Biostrings data_table GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggbio ggplot2 ggthemes parallelly plyr Rsamtools Rsubread rtracklayer S4Vectors scales ShortRead SingleCellExperiment stringdist SummarizedExperiment txdbmaker]; };
  scry = derive2 { name="scry"; version="1.16.0"; sha256="16489ff1nc798nfcmqvqaczm7hqffkhpad1dfgr7dxlahd8sbnw9"; depends=[BiocSingular DelayedArray glmpca Matrix SingleCellExperiment SummarizedExperiment]; };
  scuttle = derive2 { name="scuttle"; version="1.14.0"; sha256="1cja56k5y5vi1x0jdxaxvh13fc2lzh8g30gp294pz6p61prrf3ws"; depends=[beachmat BiocGenerics BiocParallel DelayedArray DelayedMatrixStats GenomicRanges Matrix Rcpp S4Vectors SingleCellExperiment SummarizedExperiment]; };
  scviR = derive2 { name="scviR"; version="1.4.0"; sha256="0691v3kyhazmhzr2nqzc1inbc7i1kdjv4y94wl96fd20d48ypqhp"; depends=[basilisk BiocFileCache limma MatrixGenerics pheatmap reticulate S4Vectors scater shiny SingleCellExperiment SummarizedExperiment]; };
  sechm = derive2 { name="sechm"; version="1.12.0"; sha256="0ig46ikddqqd9sclbxrv1gffc6snz0h7pindfw06cdk2i4dsan30"; depends=[circlize ComplexHeatmap matrixStats randomcoloR S4Vectors seriation SummarizedExperiment]; };
  segmentSeq = derive2 { name="segmentSeq"; version="2.38.0"; sha256="114sv9k2zlgsg82z57wwnp74hmq8p22gy5dg8my91xb3rzv3h8xw"; depends=[abind baySeq GenomeInfoDb GenomicRanges IRanges Rsamtools S4Vectors ShortRead]; };
  segmenter = derive2 { name="segmenter"; version="1.10.0"; sha256="0s4iphqgwdr0shg71gr273s20q9vrzhxq3nfqqv494z7raycf1qy"; depends=[bamsignals ChIPseeker chromhmmData ComplexHeatmap GenomicRanges IRanges S4Vectors SummarizedExperiment]; };
  selectKSigs = derive2 { name="selectKSigs"; version="1.16.0"; sha256="16cq4pg402a64vp0r1k9m91jqbdzij3la9gbzqqjc2vyr742yl14"; depends=[gtools HiLDA magrittr Rcpp]; };
  semisup = derive2 { name="semisup"; version="1.28.0"; sha256="0pmbjlgaqs9mbmyzg1d85ifp8pbjicyqs23jw8nnhlsrmpjgcywx"; depends=[VGAM]; };
  seq_hotSPOT = derive2 { name="seq.hotSPOT"; version="1.4.0"; sha256="0wyl4z54w1rk54c5sf3wvjg1sjpin0pj6j8j42g4a2zjkvvi5bva"; depends=[hash R_utils]; };
  seq2pathway = derive2 { name="seq2pathway"; version="1.36.0"; sha256="0l1a53m4gjbgf6f53nndzdxldvi0j7xawd7m05wr23v64qd8a0ng"; depends=[biomaRt GenomicRanges GSA nnet seq2pathway_data WGCNA]; };
  seqArchR = derive2 { name="seqArchR"; version="1.8.0"; sha256="0q0ip73hvjq2j39mznd980fyvbwm9yb4ihk8yihv97i8h559ml9w"; depends=[BiocParallel Biostrings cli cluster cvTools fpc ggplot2 ggseqlogo MASS Matrix matrixStats prettyunits reshape2 reticulate]; };
  seqArchRplus = derive2 { name="seqArchRplus"; version="1.4.0"; sha256="0wk87l3346v6fm77pywrwcfhwbvswkrxv79809c0wycn84qlqd0p"; depends=[BiocParallel Biostrings BSgenome ChIPseeker cli clusterProfiler cowplot factoextra GenomeInfoDb GenomicRanges ggimage ggplot2 gridExtra heatmaps IRanges magick RColorBrewer S4Vectors scales seqArchR seqPattern]; };
  seqCAT = derive2 { name="seqCAT"; version="1.26.0"; sha256="1b9y45src6yfz8fmiihp6p2s76gz1nva5swnf8fbar4mranfwi73"; depends=[dplyr GenomeInfoDb GenomicRanges ggplot2 IRanges rlang rtracklayer S4Vectors scales SummarizedExperiment tidyr VariantAnnotation]; };
  seqLogo = derive2 { name="seqLogo"; version="1.70.0"; sha256="154c3g4i6snsi8vkwjw4d8lyr3372d6vyw237nslw1y5n837yzir"; depends=[]; };
  seqPattern = derive2 { name="seqPattern"; version="1.36.0"; sha256="0iv0dhs1z8i0jglh1iw6ypzh6qslnn5xly2kjfxaxk9cggnjb5h6"; depends=[Biostrings GenomicRanges IRanges KernSmooth plotrix]; };
  seqTools = derive2 { name="seqTools"; version="1.38.0"; sha256="0sc2siflk12dnmmqsb0gfbncyh5w6cv58dba304ig7rg3vsk3277"; depends=[zlibbioc]; };
  seqcombo = derive2 { name="seqcombo"; version="1.26.0"; sha256="119wpz4rl5fyhc60myaw9d498n19pshnwwrmxkqx8pnqz9g6jjpq"; depends=[ggplot2 igraph yulab_utils]; };
  seqsetvis = derive2 { name="seqsetvis"; version="1.24.0"; sha256="1aazar9k36hwlx9fq6iyd7f6g764nih9f0phl0sla7gizrmpwsms"; depends=[cowplot data_table eulerr GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 ggplotify IRanges limma pbapply pbmcapply png RColorBrewer Rsamtools rtracklayer S4Vectors scales UpSetR]; };
  sesame = derive2 { name="sesame"; version="1.22.1"; sha256="07c7g493fiv13hxmfki1s450rganmyiwvdjhz6aqrbi2b9w08w4n"; depends=[BiocFileCache BiocParallel dplyr GenomeInfoDb GenomicRanges ggplot2 IRanges MASS preprocessCore readr reshape2 S4Vectors sesameData stringr SummarizedExperiment tibble wheatmap]; };
  sevenC = derive2 { name="sevenC"; version="1.24.0"; sha256="0x1r6zbwl6shhzf2xc7lp06dvlhqhgh70i71fwn25lndwyhkw280"; depends=[BiocGenerics boot data_table GenomeInfoDb GenomicRanges InteractionSet IRanges purrr readr rtracklayer S4Vectors]; };
  sevenbridges = derive2 { name="sevenbridges"; version="1.34.0"; sha256="0vy7vz87z371q2plhxkp5src6la6hj1w7bd4xkqbm3nmym2p32pb"; depends=[curl data_table docopt httr jsonlite objectProperties S4Vectors stringr uuid yaml]; };
  shiny_gosling = derive2 { name="shiny.gosling"; version="1.0.1"; sha256="1dig8hv7pw3p6ra1z76mg7sfbvdrdaprsix9i60503sriqs3arv2"; depends=[digest fs htmltools jsonlite rjson rlang shiny shiny_react]; };
  shinyMethyl = derive2 { name="shinyMethyl"; version="1.40.0"; sha256="15r9x1fqladjviyisbhr8zff0a6g9kvbvx72xcp3bfadp3wpygds"; depends=[Biobase BiocGenerics htmltools MatrixGenerics minfi RColorBrewer shiny]; };
  shinyepico = derive2 { name="shinyepico"; version="1.12.0"; sha256="0k6h2n8dy66k1vl5mrag45z5knhgn9xbim5b0nbrzh9pwi687nc1"; depends=[data_table doParallel dplyr DT foreach GenomicRanges ggplot2 gplots heatmaply limma minfi plotly reshape2 rlang rmarkdown rtracklayer shiny shinycssloaders shinyjs shinythemes shinyWidgets statmod tidyr zip]; };
  sigFeature = derive2 { name="sigFeature"; version="1.22.0"; sha256="0hgdzjlxxsxmrjrdlzabssdisn1rmi6h9nd37gid4dbr8xd1ibyh"; depends=[BiocParallel biocViews e1071 Matrix nlme openxlsx pheatmap RColorBrewer SparseM SummarizedExperiment]; };
  siggenes = derive2 { name="siggenes"; version="1.78.0"; sha256="0j4nhdq82dzr19x5w4w4l97clra0z1kk6n24x56hrrj0xlm2cgnm"; depends=[Biobase multtest scrime]; };
  sights = derive2 { name="sights"; version="1.30.0"; sha256="0kr52ng79wz6rh0rhk5kmjskn04xr89h14bdhryyzkhq80v0c2k8"; depends=[ggplot2 lattice MASS qvalue reshape2]; };
  signatureSearch = derive2 { name="signatureSearch"; version="1.18.0"; sha256="1b32n67f5c804xxbpwxpykjhakixzf5zd1zbgwj976lvdb2adl34"; depends=[AnnotationDbi BiocGenerics BiocParallel clusterProfiler data_table DelayedArray DOSE dplyr ExperimentHub fastmatch fgsea ggplot2 GSEABase HDF5Array magrittr Matrix org_Hs_eg_db qvalue Rcpp reactome_db readr reshape2 rhdf5 RSQLite scales SummarizedExperiment tibble visNetwork]; };
  signeR = derive2 { name="signeR"; version="2.6.0"; sha256="0jc9z48sgzjgxdidp9qhn4ccnx7jjlj0xnfrwajh0xq0ai1vnqb6"; depends=[ada BiocFileCache BiocGenerics Biostrings BSgenome bsplus class clue cowplot dplyr DT e1071 future future_apply GenomeInfoDb GenomicRanges ggplot2 ggpubr glmnet IRanges kknn listenv magrittr MASS maxstat nloptr NMF pheatmap PMCMRplus ppclust pROC proxy pvclust randomForest RColorBrewer Rcpp RcppArmadillo readr reshape2 rtracklayer scales shiny shinycssloaders shinydashboard shinyWidgets survival survivalAnalysis survminer tibble tidyr VariantAnnotation VGAM]; };
  signifinder = derive2 { name="signifinder"; version="1.6.0"; sha256="0r6acaqk7zaryy8ddpfischw08b6sml3cydrw8v9wys0rfv207pb"; depends=[AnnotationDbi BiocGenerics ComplexHeatmap consensusOV cowplot DGEobj_utils dplyr ensembldb ggplot2 ggridges GSVA IRanges magrittr matrixStats maxstat openair org_Hs_eg_db patchwork RColorBrewer sparrow SpatialExperiment SummarizedExperiment survival survminer TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Hsapiens_UCSC_hg38_knownGene viridis]; };
  sigsquared = derive2 { name="sigsquared"; version="1.36.0"; sha256="19z9jfiacm4idh4638vk358jrl8zkg6jay7r07hkqpc3m6i0ysa0"; depends=[Biobase survival]; };
  simPIC = derive2 { name="simPIC"; version="1.0.0"; sha256="0qspzkpdfpya2hkj1lry68cybcsscw9xj5ycpg87xg38n3jyqcbm"; depends=[actuar BiocGenerics checkmate fitdistrplus Matrix matrixStats rlang S4Vectors scales scuttle SingleCellExperiment SummarizedExperiment]; };
  similaRpeak = derive2 { name="similaRpeak"; version="1.36.0"; sha256="12im06jfjy3b00bga1sskxn15b1bsbhybsqi8lw9pgwx2hmrf4hb"; depends=[R6]; };
  simona = derive2 { name="simona"; version="1.2.0"; sha256="04ynhnkb9qnniyvavfylg010pyry843362pjcw94kw9bwnklscy5"; depends=[circlize ComplexHeatmap GetoptLong GlobalOptions igraph matrixStats Polychrome Rcpp S4Vectors shiny xml2]; };
  simpleSeg = derive2 { name="simpleSeg"; version="1.6.1"; sha256="0rmd9kclh6x9gxqncw25563c4vh2xk206iia0qc058w9lbzqyp5f"; depends=[BiocParallel cytomapper EBImage S4Vectors spatstat_geom SummarizedExperiment terra]; };
  simplifyEnrichment = derive2 { name="simplifyEnrichment"; version="1.14.0"; sha256="1031rkl2gcgx4k1biz4bc38hfq7r6diqk48769jhii0r06ablrhi"; depends=[AnnotationDbi BiocGenerics circlize clue cluster colorspace ComplexHeatmap digest GetoptLong GlobalOptions GO_db GOSemSim Matrix org_Hs_eg_db proxyC slam tm]; };
  sincell = derive2 { name="sincell"; version="1.36.0"; sha256="1028mdjjxbnw5fzsdyjjgy7v6yhslhhm7053q3889yqamw0l82fg"; depends=[cluster entropy fastICA fields ggplot2 igraph MASS proxy Rcpp reshape2 Rtsne scatterplot3d statmod TSP]; };
  single = derive2 { name="single"; version="1.7.0"; sha256="0h7h9m4xr65nayr707jvjnbic1q4z0hsghw5i3pfpz2n6p9pb8s8"; depends=[BiocGenerics Biostrings dplyr GenomicAlignments IRanges reshape2 rlang Rsamtools stringr tidyr]; };
  singleCellTK = derive2 { name="singleCellTK"; version="2.14.0"; sha256="06qpdl1k5c94rsnbnb4vkml1sahvav3pkr71hfkqikyscbydnay4"; depends=[anndata AnnotationHub ape batchelor Biobase BiocParallel celda celldex circlize cluster colorspace colourpicker ComplexHeatmap cowplot data_table DelayedArray DelayedMatrixStats DESeq2 dplyr DropletUtils DT eds enrichR ensembldb ExperimentHub fields ggplot2 ggplotify ggrepel ggtree gridExtra GSEABase GSVA GSVAdata igraph KernSmooth limma magrittr MAST Matrix matrixStats metap msigdbr multtest plotly plyr R_utils reshape2 reticulate rlang rmarkdown ROCR Rtsne S4Vectors scater scDblFinder scds scMerge scran scRNAseq scuttle Seurat shiny shinyalert shinycssloaders shinyjs SingleCellExperiment SingleR SoupX SummarizedExperiment sva TENxPBMCData tibble TrajectoryUtils TSCAN tximport VAM withr yaml zellkonverter zinbwave]; };
  singscore = derive2 { name="singscore"; version="1.24.0"; sha256="12avzrc16mxz7v8jp4rxz5ia6008rjcja1h3hd0n60z644w9cng2"; depends=[Biobase BiocParallel edgeR ggplot2 ggrepel GSEABase magrittr matrixStats plotly plyr RColorBrewer reshape reshape2 S4Vectors SummarizedExperiment tidyr]; };
  sitadela = derive2 { name="sitadela"; version="1.12.0"; sha256="1ynq19116z228cakznkpxd7msqxbvbgax2k6rk0wh9xksi6qzkpg"; depends=[Biobase BiocGenerics biomaRt Biostrings GenomeInfoDb GenomicFeatures GenomicRanges IRanges Rsamtools RSQLite rtracklayer S4Vectors txdbmaker]; };
  sitePath = derive2 { name="sitePath"; version="1.20.0"; sha256="10g25has168cj7xjpn0q3da9rm7dxg6n2ysb8yc974gxqkabhzjh"; depends=[ape aplot ggplot2 ggrepel ggtree gridExtra RColorBrewer Rcpp seqinr tidytree]; };
  sizepower = derive2 { name="sizepower"; version="1.74.0"; sha256="0qqxvyd3kya0rjip4l41cmv3b9q7a2nb4l5hny591qr703vx31bq"; depends=[]; };
  sketchR = derive2 { name="sketchR"; version="1.0.0"; sha256="0jsv2rizfh72hrk9jrlhgl36cksa97858h7w57fkihq2hq155n67"; depends=[basilisk Biobase DelayedArray dplyr ggplot2 reticulate rlang scales]; };
  skewr = derive2 { name="skewr"; version="1.36.0"; sha256="1hh0519pqv6lq21plph7sy88918np12g7aw542sfblm81ma4p4qv"; depends=[IlluminaHumanMethylation450kmanifest methylumi minfi mixsmsn RColorBrewer S4Vectors wateRmelon]; };
  slalom = derive2 { name="slalom"; version="1.26.0"; sha256="0km062qb7k7g18zz03nr6m7nigzpbxkasgirc4igslz4sfcldd9x"; depends=[BH ggplot2 GSEABase Rcpp RcppArmadillo rsvd SingleCellExperiment SummarizedExperiment]; };
  slingshot = derive2 { name="slingshot"; version="2.12.0"; sha256="055dylajbn94khi0829qhxx0lbn1pvh30xw09gjn1jvxsgzj49nc"; depends=[igraph matrixStats princurve S4Vectors SingleCellExperiment SummarizedExperiment TrajectoryUtils]; };
  smartid = derive2 { name="smartid"; version="1.0.2"; sha256="1bm8g8n3xifc2dg1d9vpw79vpwssa9q6ssvzyf77gp24zp2r734i"; depends=[dplyr ggplot2 Matrix mclust mixtools sparseMatrixStats SummarizedExperiment tidyr]; };
  smoothclust = derive2 { name="smoothclust"; version="1.0.0"; sha256="17mcfjxsgdvignrx576v97iwapmkfc4my8pvm6b2y1w7pibilx65"; depends=[sparseMatrixStats SpatialExperiment spdep SummarizedExperiment]; };
  snapcount = derive2 { name="snapcount"; version="1.16.0"; sha256="1hjd6xdwgz2qal6scpldwpdqlrbgap45bq2h599df6hgvrdym3l7"; depends=[assertthat data_table GenomicRanges httr IRanges jsonlite magrittr Matrix purrr R6 rlang stringr SummarizedExperiment]; };
  snifter = derive2 { name="snifter"; version="1.14.0"; sha256="1rmg6dq7sm7aisjrli8ya1wx2b0y0vngf5zksy1x77v6c5mk4b72"; depends=[assertthat basilisk irlba reticulate]; };
  snm = derive2 { name="snm"; version="1.52.0"; sha256="1xihnp2kvgj4lkdbf8l0km2s06j0zqpf91946riirbyk6iq3igrn"; depends=[corpcor lme4]; };
  snpStats = derive2 { name="snpStats"; version="1.54.0"; sha256="160pl3dy7v89i90x262hxqgipas4pyim600l6m50g3c03vm5in03"; depends=[BiocGenerics Matrix survival zlibbioc]; };
  soGGi = derive2 { name="soGGi"; version="1.36.0"; sha256="0z995iyffzglc26pava4icxl315b077983lxvaldz5xkyhgvgpz7"; depends=[BiocGenerics BiocParallel Biostrings chipseq GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges preprocessCore reshape2 Rsamtools rtracklayer S4Vectors SummarizedExperiment]; };
  spaSim = derive2 { name="spaSim"; version="1.6.0"; sha256="1lac621ss7qhfrabyn3nsmgiif4bcgwrgzs1xvbvf4lvwcy7ychm"; depends=[dplyr ggplot2 RANN SpatialExperiment spatstat_geom spatstat_random SummarizedExperiment]; };
  sparrow = derive2 { name="sparrow"; version="1.10.1"; sha256="0vd18ws47zhx87bi35lmbh9wkp6s6d5nd9x77gd7fh24ni5z338s"; depends=[babelgene BiocGenerics BiocParallel BiocSet checkmate circlize ComplexHeatmap data_table DelayedMatrixStats edgeR ggplot2 GSEABase irlba limma Matrix plotly viridis]; };
  sparseMatrixStats = derive2 { name="sparseMatrixStats"; version="1.16.0"; sha256="04hk9r6sh83dyxm2j7jdcj0m4g74ln218j21rs71c2gg6mrkmlgf"; depends=[Matrix MatrixGenerics matrixStats Rcpp]; };
  sparsenetgls = derive2 { name="sparsenetgls"; version="1.22.0"; sha256="1x8qzqsr2rzx6683lmzw5ia21853l7gj3m5jkx0r8azmjk4r6kqb"; depends=[glmnet huge MASS Matrix]; };
  spatialDE = derive2 { name="spatialDE"; version="1.10.0"; sha256="02npzs4vmjgc7bmv4rmmnz82slqcyrsq4y7wqapm30m7slhzm11g"; depends=[basilisk checkmate ggplot2 ggrepel gridExtra Matrix reticulate scales SpatialExperiment SummarizedExperiment]; };
  spatialHeatmap = derive2 { name="spatialHeatmap"; version="2.10.0"; sha256="13f6q8gvwnq5saj6n90dgyhc8y3rl6m1vcc3z3zz08i469d948vq"; depends=[data_table dplyr edgeR genefilter ggplot2 ggplotify gplots gridExtra grImport igraph Matrix reshape2 rsvg S4Vectors scater scran scuttle shiny shinydashboard SingleCellExperiment spsComps SummarizedExperiment tibble xml2]; };
  spatzie = derive2 { name="spatzie"; version="1.10.0"; sha256="1jii3viq7ck1clkr59yafnh5a4pblskd77i1i3gxs7fpvl8ab7qb"; depends=[BiocGenerics BSgenome GenomeInfoDb GenomicFeatures GenomicInteractions GenomicRanges ggplot2 IRanges MatrixGenerics matrixStats motifmatchr S4Vectors SummarizedExperiment TFBSTools]; };
  specL = derive2 { name="specL"; version="1.38.0"; sha256="0klg19h1ijwd9f7pary77zn52mp8ryzvhv6g3h5xg8yjv1kl9m7r"; depends=[DBI protViz RSQLite seqinr]; };
  speckle = derive2 { name="speckle"; version="1.4.0"; sha256="1m7fl9l20f65w5il3jhj930i71kb1bvsz0iqb7yi1nczjx1b6hcw"; depends=[edgeR ggplot2 limma Seurat SingleCellExperiment]; };
  spicyR = derive2 { name="spicyR"; version="1.16.1"; sha256="03bmjr4vbma5ynj773b364vb05vf06fyzvbq75qi7mczjyh4kckw"; depends=[BiocParallel ClassifyR cli concaveman data_table dplyr ggforce ggplot2 lmerTest magrittr pheatmap rlang S4Vectors scam SingleCellExperiment SpatialExperiment spatstat_explore spatstat_geom SummarizedExperiment tibble tidyr]; };
  spikeLI = derive2 { name="spikeLI"; version="2.64.0"; sha256="1n8dbfaraal941djg1a065zdqsw6dacw92kj0615mq520wviwwqi"; depends=[]; };
  spiky = derive2 { name="spiky"; version="1.10.0"; sha256="1cwvdqa4zy17nk6d04kg6rrsd6rk4f5nrg58pf882jn44rjfl49i"; depends=[bamlss Biostrings BlandAltmanLeh BSgenome GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges Rsamtools S4Vectors scales]; };
  spillR = derive2 { name="spillR"; version="1.0.0"; sha256="1pqb9n0rvjx8wdw4vjfmi9m2d5lf6xddygpf1grab3yhkrn9akw8"; depends=[CATALYST dplyr ggplot2 S4Vectors spatstat_geom SummarizedExperiment tibble tidyr tidyselect]; };
  spkTools = derive2 { name="spkTools"; version="1.60.0"; sha256="1q6vhhdfh5xwpkwfcbjlbv9s8rd5mzn98xqcns7ix5d3rcqk5ixk"; depends=[Biobase gtools RColorBrewer]; };
  splatter = derive2 { name="splatter"; version="1.28.0"; sha256="1drifr04nd8x40z6v0ig60l2zcm289kmxlmdy8siczn90xzy8cm7"; depends=[BiocGenerics BiocParallel checkmate crayon edgeR fitdistrplus locfit matrixStats rlang S4Vectors scuttle SingleCellExperiment SummarizedExperiment withr]; };
  splineTimeR = derive2 { name="splineTimeR"; version="1.32.0"; sha256="0y4sydqmwpj5jwalhbf1zs6mqk447c7f22a5qy9pj8sqblh042rn"; depends=[Biobase FIs GeneNet GSEABase gtools igraph limma longitudinal]; };
  splots = derive2 { name="splots"; version="1.70.0"; sha256="0dr0d1c5v45vmfdpm6hkg4dbjx6c4y9hadpra8ym5bcmlsb14xaa"; depends=[RColorBrewer]; };
  spoon = derive2 { name="spoon"; version="1.0.0"; sha256="1ygrb534nlsxckbc61y5s3rjc4cpmf265y5a48charjv9y3ahw19"; depends=[BiocParallel BRISC Matrix nnSVG scuttle SpatialExperiment SummarizedExperiment]; };
  spqn = derive2 { name="spqn"; version="1.16.0"; sha256="0477rs2wq9319zj1pm7j96inhd38sqs85wvj06r47g2k77blcz87"; depends=[BiocGenerics ggplot2 ggridges matrixStats SummarizedExperiment]; };
  srnadiff = derive2 { name="srnadiff"; version="1.24.0"; sha256="0gr754qb5gc0lh1r513yrfrys7q13a0kmbzmbx5m0p7wwp508mdg"; depends=[BiocManager BiocParallel BiocStyle DESeq2 devtools edgeR GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges Gviz IRanges Rcpp Rsamtools rtracklayer S4Vectors SummarizedExperiment]; };
  ssPATHS = derive2 { name="ssPATHS"; version="1.18.0"; sha256="0h2hs6snnh9kzqna94ndp3gk4bkldsxrg67fy6gx7d15agjl9y2s"; depends=[dml MESS ROCR SummarizedExperiment]; };
  sscu = derive2 { name="sscu"; version="2.34.0"; sha256="0ym9c6r2ny5j9lzcccllq29jl4g1021n5n0l8z51lgkypaq5zlik"; depends=[BiocGenerics Biostrings seqinr]; };
  ssize = derive2 { name="ssize"; version="1.78.0"; sha256="078mw9mb39liw4jalivgm1giib7pizizxyzmy4gzq8wb35psb39m"; depends=[gdata xtable]; };
  ssrch = derive2 { name="ssrch"; version="1.20.0"; sha256="16pc861c3ljrnagjc02pksymv24kp18380afqhz2isif0za8kl6d"; depends=[DT shiny]; };
  ssviz = derive2 { name="ssviz"; version="1.38.0"; sha256="0m5jh45v58f92m4ib7b1fy7gpixpvgm65gx2sw1qmx1qihp4hkrb"; depends=[Biostrings ggplot2 RColorBrewer reshape Rsamtools]; };
  stJoincount = derive2 { name="stJoincount"; version="1.6.0"; sha256="1i8bkygxxl3cq8zjpfslakib1knivyc4wfil1sa4s0jcj4iyhlhx"; depends=[dplyr ggplot2 magrittr pheatmap raster Seurat sp SpatialExperiment spdep SummarizedExperiment]; };
  staRank = derive2 { name="staRank"; version="1.46.0"; sha256="13z24si93h17hdiagjg26kv07bzyfl54iymb1jd7yn47924dr3n3"; depends=[cellHTS2]; };
  stageR = derive2 { name="stageR"; version="1.26.0"; sha256="0ayjwv2i9q8dzq5pzhyzkxzkz9ycka2v6ccvq5y9cg7x0mw4qvbh"; depends=[SummarizedExperiment]; };
  standR = derive2 { name="standR"; version="1.8.0"; sha256="0lnggcppcgd5k07yx5ig7gjyj7bkwk7mvs9l785mlr1wgmqz4vm0"; depends=[Biobase BiocGenerics dplyr edgeR ggalluvial ggplot2 limma mclustcomp patchwork readr rlang ruv RUVSeq S4Vectors SingleCellExperiment SpatialExperiment SummarizedExperiment tibble tidyr]; };
  statTarget = derive2 { name="statTarget"; version="1.34.0"; sha256="0p89j6isdyy7zlniqd42s7y50sjyd7a9fpg3hwi92ssvv77zdd4c"; depends=[impute pdist pls plyr randomForest ROC rrcov]; };
  stepNorm = derive2 { name="stepNorm"; version="1.76.0"; sha256="18v5hqcwnbzw8kwq9ahia36ikr3fd1cgwvx0rj32qbs66kr9phhz"; depends=[marray MASS]; };
  strandCheckR = derive2 { name="strandCheckR"; version="1.22.0"; sha256="05r9d87y158pbnakqcli94nbwfvl72bsl1wbmbjyhk3cp9r1si2d"; depends=[BiocGenerics dplyr GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gridExtra IRanges magrittr reshape2 rmarkdown Rsamtools S4Vectors stringr TxDb_Hsapiens_UCSC_hg38_knownGene]; };
  struct = derive2 { name="struct"; version="1.16.0"; sha256="086fjmhmywi8ciycnz29fgkjwmxws2d130fvgwmx504gf7l841lk"; depends=[knitr ontologyIndex rols S4Vectors SummarizedExperiment]; };
  structToolbox = derive2 { name="structToolbox"; version="1.16.0"; sha256="0a9hvwj6cgbs61m9vjfm704kp42mj05shjxnr79j8irfbx87q8w4"; depends=[ggplot2 ggthemes gridExtra scales sp struct]; };
  subSeq = derive2 { name="subSeq"; version="1.34.0"; sha256="1pdjw0balc7lx92azfxxl80h2lkqhk5sx94cfzgw3cwb8s2abwka"; depends=[Biobase data_table digest dplyr ggplot2 magrittr qvalue tidyr]; };
  supersigs = derive2 { name="supersigs"; version="1.12.0"; sha256="00rnd7h7xrbpr5jqz7l03pk6rlyqfcmkyrxpjwayz9gj2yc87lk3"; depends=[assertthat Biostrings caret dplyr rlang rsample SummarizedExperiment tidyr]; };
  supraHex = derive2 { name="supraHex"; version="1.42.0"; sha256="10qfvwbz5cbxvxbdmbc29jfp6apza4z70p4b9nfwgs4y95c11p7l"; depends=[ape dplyr hexbin igraph magrittr MASS purrr readr stringr tibble tidyr]; };
  surfaltr = derive2 { name="surfaltr"; version="1.10.0"; sha256="1i7ssmnnv81x5nb63sbk07mkirb99bsn9kyy59n8ib03akygv2mz"; depends=[biomaRt Biostrings dplyr ggplot2 httr msa protr readr seqinr stringr testthat xml2]; };
  survcomp = derive2 { name="survcomp"; version="1.54.0"; sha256="090dl580cwicn3px1khkhcix25snig0k7phb7z3nzmrbxmp82ygc"; depends=[bootstrap ipred KernSmooth prodlim rmeta SuppDists survival survivalROC]; };
  survtype = derive2 { name="survtype"; version="1.20.0"; sha256="0pyyzkxqaa8xbrap1d2ppd4g4i4zxr8frjw0mlq8hw9gf1n94k0l"; depends=[clustvarsel pheatmap SummarizedExperiment survival survminer]; };
  sva = derive2 { name="sva"; version="3.52.0"; sha256="07iq894mf5d66cxjl283pcvj1frj56pb15z984d4svk6f5cacg3z"; depends=[BiocParallel edgeR genefilter limma matrixStats mgcv]; };
  svaNUMT = derive2 { name="svaNUMT"; version="1.10.0"; sha256="15159bxq26w80nc160rk5k48435h6snxmsmynfjiaq3kzv5143pd"; depends=[assertthat BiocGenerics Biostrings dplyr GenomeInfoDb GenomicFeatures GenomicRanges pwalign rlang rtracklayer S4Vectors stringr StructuralVariantAnnotation VariantAnnotation]; };
  svaRetro = derive2 { name="svaRetro"; version="1.10.0"; sha256="03scsdy5pypir0jqgj38y5hnj82sh21gip5xd8dbqjk9ryb75ays"; depends=[assertthat BiocGenerics Biostrings dplyr GenomeInfoDb GenomicFeatures GenomicRanges rlang rtracklayer S4Vectors stringr StructuralVariantAnnotation VariantAnnotation]; };
  swfdr = derive2 { name="swfdr"; version="1.30.0"; sha256="0ld015l7sxl1rmn1p6wi7k8wk3p8y7qad7klb47y23mhwfwhn7cs"; depends=[]; };
  switchBox = derive2 { name="switchBox"; version="1.40.0"; sha256="03535j0hgdgpdks9hc10zkq7kyr4zp8xdp963qny5c4aa4naz7pi"; depends=[gplots pROC]; };
  switchde = derive2 { name="switchde"; version="1.30.0"; sha256="033xpkivywvk4rg1gqr0drrhwgp58nlgr3in65c0fxlwd1jd6kpj"; depends=[dplyr ggplot2 SingleCellExperiment SummarizedExperiment]; };
  synapsis = derive2 { name="synapsis"; version="1.10.0"; sha256="0w2pagkvnipz6wmz9yhpysiy7ydc7w8cqjifsqzdh771b3ccw0kl"; depends=[EBImage]; };
  synapter = derive2 { name="synapter"; version="2.28.0"; sha256="1imhap1ny0x687qh9s1q9m978hwhhkci0j8i3qfwrvn3ykijlsa7"; depends=[Biobase Biostrings cleaver lattice MSnbase multtest qvalue RColorBrewer readr rmarkdown]; };
  synergyfinder = derive2 { name="synergyfinder"; version="3.12.0"; sha256="02d9615k8fl9bb7hd6f5vz11k9aard8zs880siac2s23pwzivjwn"; depends=[dplyr drc furrr future ggforce ggplot2 ggrepel gstat kriging lattice magrittr metR mice nleqslv pbapply plotly purrr reshape2 sp SpatialExtremes stringr tidyr tidyverse vegan]; };
  synlet = derive2 { name="synlet"; version="2.4.0"; sha256="0nfqm2qfavn71k5dhz6x2958yplasnbvjc6mqzh4i237x03184g4"; depends=[data_table ggplot2 magrittr patchwork RankProd RColorBrewer]; };
  syntenet = derive2 { name="syntenet"; version="1.6.0"; sha256="1220hbkmg10ly0i5m6wnqnsa6m2f2xgs85798y9mlcqwxrp5ih35"; depends=[BiocParallel Biostrings GenomicRanges ggnetwork ggplot2 igraph intergraph networkD3 pheatmap RColorBrewer Rcpp rlang rtracklayer testthat]; };
  systemPipeR = derive2 { name="systemPipeR"; version="2.10.0"; sha256="13xxcqy5hhy45zglv6gc86ndmisfkjq4dg55x2j1kw3jqha1brnx"; depends=[BiocGenerics Biostrings crayon GenomicRanges ggplot2 htmlwidgets magrittr Rsamtools S4Vectors ShortRead stringr SummarizedExperiment yaml]; };
  systemPipeShiny = derive2 { name="systemPipeShiny"; version="1.14.0"; sha256="14wgamxg2jpj3xjlna9x5rd3kpndhxs20gh84acix3pa3ppr8xgf"; depends=[assertthat bsplus crayon dplyr drawer DT ggplot2 glue htmltools magrittr openssl plotly R6 rlang RSQLite rstudioapi shiny shinyAce shinydashboard shinydashboardPlus shinyFiles shinyjqui shinyjs shinytoastr shinyWidgets spsComps spsUtil stringr styler tibble vroom yaml]; };
  systemPipeTools = derive2 { name="systemPipeTools"; version="1.12.0"; sha256="08r0dglqpr638pbssr3l3xcly7mhj0jsq5rrzdnqh5sg4wz11gyj"; depends=[ape DESeq2 dplyr DT GGally ggplot2 ggrepel ggtree glmpca magrittr pheatmap plotly Rtsne SummarizedExperiment tibble]; };
  tLOH = derive2 { name="tLOH"; version="1.12.0"; sha256="0r8a0srff8y5ap2zz4kk6302gkb69bgylxggnz704zi3yzvyklv1"; depends=[bestNormalize data_table depmixS4 dplyr GenomicRanges ggplot2 MatrixGenerics naniar purrr scales stringr VariantAnnotation]; };
  tRNA = derive2 { name="tRNA"; version="1.22.0"; sha256="0dg4s5kxsdh2j8smqi8vm7yncy9kb79sj8xlvf4wgf3aljarms21"; depends=[BiocGenerics Biostrings GenomicRanges ggplot2 IRanges Modstrings S4Vectors scales stringr Structstrings XVector]; };
  tRNAdbImport = derive2 { name="tRNAdbImport"; version="1.22.0"; sha256="0yvgxxf5d5mh91cmbba66krj6jz5gl1qkgjck9310k4mk7pjfww3"; depends=[Biostrings GenomicRanges httr2 IRanges Modstrings S4Vectors stringr Structstrings tRNA xml2]; };
  tRNAscanImport = derive2 { name="tRNAscanImport"; version="1.24.0"; sha256="12wn5sdq1miimn31ismzs2w06q3l66l774dbfndw8bx3awhrf7g1"; depends=[BiocGenerics Biostrings BSgenome GenomeInfoDb GenomicRanges IRanges Rsamtools rtracklayer S4Vectors stringr Structstrings tRNA XVector]; };
  tRanslatome = derive2 { name="tRanslatome"; version="1.42.0"; sha256="0xnr7a7cm7lcvyipjj6p4347yqykpfghz37qxyam5ixplfwlh1cg"; depends=[anota Biobase DESeq2 edgeR GOSemSim gplots Heatplus limma org_Hs_eg_db plotrix RankProd topGO]; };
  tadar = derive2 { name="tadar"; version="1.2.0"; sha256="12jmrnaqf1hkdjw2qvxjkb2y2860ck9a5957h44nkhxf75lv35vb"; depends=[BiocGenerics GenomeInfoDb GenomicRanges ggplot2 Gviz IRanges MatrixGenerics rlang Rsamtools S4Vectors VariantAnnotation]; };
  tanggle = derive2 { name="tanggle"; version="1.10.0"; sha256="0dcy2bvim02x9wqd6fxs7562nl8849h13n2q16pcbc67ljhss27m"; depends=[ape ggplot2 ggtree phangorn]; };
  target = derive2 { name="target"; version="1.18.0"; sha256="1crqxj8wk66h2jvxnmw5rhdsdfhkd59d2pxw1lf05w7dkd495zfr"; depends=[BiocGenerics GenomicRanges IRanges matrixStats shiny]; };
  ternarynet = derive2 { name="ternarynet"; version="1.48.0"; sha256="1f431kkyhazw4kxnfhhk0jb9gkfp7llpm054rv44if328bbi931h"; depends=[BiocParallel igraph]; };
  terraTCGAdata = derive2 { name="terraTCGAdata"; version="1.8.0"; sha256="18i933ndja1pa4iql96fvx2brjmcvvirlp048hjxvkapm0bhsm19"; depends=[AnVIL BiocFileCache dplyr GenomicRanges MultiAssayExperiment RaggedExperiment readr S4Vectors TCGAutils tidyr]; };
  tidyCoverage = derive2 { name="tidyCoverage"; version="1.0.0"; sha256="150q5qwifni2d2jvx1k3c0cq5n2k1s33yps8v5d6ksa3qs510p4s"; depends=[BiocIO BiocParallel cli dplyr fansi GenomeInfoDb GenomicRanges IRanges pillar purrr rlang rtracklayer S4Vectors SummarizedExperiment tidyr vctrs]; };
  tidySingleCellExperiment = derive2 { name="tidySingleCellExperiment"; version="1.14.0"; sha256="1rvc0576ajxx7njyiyh2ql85an4dn9v8v4q7g8gfdgd9jg5v4hmz"; depends=[cli dplyr ellipsis fansi ggplot2 lifecycle magrittr Matrix pillar pkgconfig purrr rlang S4Vectors SingleCellExperiment stringr SummarizedExperiment tibble tidyr tidyselect ttservice vctrs]; };
  tidySpatialExperiment = derive2 { name="tidySpatialExperiment"; version="1.0.0"; sha256="0a2bramm53dvl7qib18z7s8zrfjprkrg6zzj5q7z4jf5smj7szzf"; depends=[BiocGenerics cli dplyr fansi ggplot2 lifecycle magrittr Matrix pillar pkgconfig purrr rlang S4Vectors SingleCellExperiment SpatialExperiment stringr SummarizedExperiment tibble tidyr tidyselect tidySingleCellExperiment ttservice vctrs]; };
  tidySummarizedExperiment = derive2 { name="tidySummarizedExperiment"; version="1.14.0"; sha256="0bcvna28shr27pdzi1n2g6bldqrakkwn0wh7ld39wbn439awshr9"; depends=[cli dplyr ellipsis fansi ggplot2 lifecycle magrittr pillar pkgconfig purrr rlang S4Vectors stringr SummarizedExperiment tibble tidyr tidyselect ttservice vctrs]; };
  tidybulk = derive2 { name="tidybulk"; version="1.16.0"; sha256="1ij4x2fqcpdkdl62kwjhk3w19m7vwq8m3bglhsxz7pkzy49cfifx"; depends=[crayon dplyr GenomicRanges lifecycle magrittr Matrix preprocessCore purrr readr rlang S4Vectors scales stringi stringr SummarizedExperiment tibble tidyr tidyselect ttservice]; };
  tidyomics = derive2 { name="tidyomics"; version="1.0.0"; sha256="08d2bkaqya090y93wg8cj36bbqbiy62p9swiz9ci9z4055sv900y"; depends=[cli nullranges plyranges purrr rlang stringr tidybulk tidyseurat tidySingleCellExperiment tidySummarizedExperiment]; };
  tigre = derive2 { name="tigre"; version="1.58.0"; sha256="1gdfiga7m4zdsr8vj8anlkj1jfdrlzhsik36jdgi4f92pyyllgwx"; depends=[annotate AnnotationDbi Biobase BiocGenerics DBI gplots RSQLite]; };
  tilingArray = derive2 { name="tilingArray"; version="1.82.0"; sha256="1408275gvfilc2k8sfsja8bm5fdgnblf2sf5wdd3if51qi61clb0"; depends=[affy Biobase genefilter pixmap RColorBrewer strucchange vsn]; };
  timeOmics = derive2 { name="timeOmics"; version="1.16.0"; sha256="12qxipaqmkvfb6lvbl40v9fb0vink4jgxlx9kg9kg2sd9kb7qrav"; depends=[checkmate dplyr ggplot2 ggrepel lmtest magrittr mixOmics plyr purrr stringr tibble tidyr]; };
  timecourse = derive2 { name="timecourse"; version="1.76.0"; sha256="05q6vw76hhi4frpf4vivq1jxkh99xq44vw2p5gz4zgcinsc58yql"; depends=[Biobase limma marray MASS]; };
  timescape = derive2 { name="timescape"; version="1.28.0"; sha256="1xcdx61gv0vvzdl04nfp7kbp6qxbkfmh88pvdz47jmkcy9ap8zmm"; depends=[dplyr gtools htmlwidgets jsonlite stringr]; };
  tkWidgets = derive2 { name="tkWidgets"; version="1.82.0"; sha256="0k1d5r306mbry0h7yqp246i13adxlmxl2vhwdsfgh29v8qkg1szl"; depends=[DynDoc widgetTools]; };
  tomoda = derive2 { name="tomoda"; version="1.14.0"; sha256="0cx4153sknl0prpdm12y6n44kg10ib8b7qk3102pvgv9mz4xgrbv"; depends=[ggplot2 ggrepel RColorBrewer reshape2 Rtsne SummarizedExperiment umap]; };
  tomoseqr = derive2 { name="tomoseqr"; version="1.8.0"; sha256="14x665zaljr448gdb84d0y1hlqih7n9z2dy052y4ay22l10f8886"; depends=[animation BiocFileCache dplyr ggplot2 plotly purrr readr shiny stringr tibble]; };
  topGO = derive2 { name="topGO"; version="2.56.0"; sha256="0ly4rai3na88dnfizsi60r6py0qmf0pw95b0hprfkvzpjyd72p75"; depends=[AnnotationDbi Biobase BiocGenerics DBI GO_db graph lattice matrixStats SparseM]; };
  topconfects = derive2 { name="topconfects"; version="1.20.0"; sha256="1jcmnxf5sazw7xg8r39m059z2vai03nr0kadd8dfcvn6cfaqmvbg"; depends=[assertthat ggplot2]; };
  topdownr = derive2 { name="topdownr"; version="1.26.0"; sha256="1axqyjlp6386shcw95mg0ljj12683ix03yk5bcxr2bqd36csfa6y"; depends=[Biobase BiocGenerics Biostrings ggplot2 Matrix MSnbase mzR ProtGenerics PSMatch S4Vectors]; };
  tpSVG = derive2 { name="tpSVG"; version="1.0.0"; sha256="135w2w6j3cgfrkfkzmmy40ii10zp32r7xjc0pg07h2gm0hdz5yj0"; depends=[BiocParallel MatrixGenerics mgcv SingleCellExperiment SpatialExperiment SummarizedExperiment]; };
  trackViewer = derive2 { name="trackViewer"; version="1.40.0"; sha256="01m0jwig3l6dfhd3w5aq4sx2krsipjg5jjxa78kalfrzrm6k05s4"; depends=[AnnotationDbi BiocGenerics GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges grImport Gviz htmlwidgets igraph InteractionSet IRanges plotrix rhdf5 Rsamtools rtracklayer S4Vectors scales strawr txdbmaker]; };
  tracktables = derive2 { name="tracktables"; version="1.38.0"; sha256="1rfpb13sd2rqhxkywif58fm2l8ch664ga149y1nxwf409hbqb81w"; depends=[GenomicRanges IRanges RColorBrewer Rsamtools stringr tractor_base XML XVector]; };
  tradeSeq = derive2 { name="tradeSeq"; version="1.18.0"; sha256="1kgvvvwvj3dgb2wik3y8j44ynda94bi05vvmiwlayrypqprwi1c1"; depends=[Biobase BiocParallel edgeR ggplot2 igraph magrittr MASS Matrix matrixStats mgcv pbapply princurve RColorBrewer S4Vectors SingleCellExperiment slingshot SummarizedExperiment tibble TrajectoryUtils viridis]; };
  transcriptR = derive2 { name="transcriptR"; version="1.32.0"; sha256="1lx11dyr8q4yd57l7rj0788488amhiiahfml2m69554hk94cd46i"; depends=[BiocGenerics caret chipseq e1071 GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 IRanges pROC reshape2 Rsamtools rtracklayer S4Vectors]; };
  transcriptogramer = derive2 { name="transcriptogramer"; version="1.26.0"; sha256="0n44im93a72sihivlxn5x2k3s412b91ixqamc0wlk57vw0ppycm6"; depends=[biomaRt data_table doSNOW foreach ggplot2 igraph limma progress RedeR snow tidyr topGO]; };
  transformGamPoi = derive2 { name="transformGamPoi"; version="1.10.0"; sha256="09z5d72zk6lnhjvfffpylgkk6w73wrlcasr8agy7ydy1b80cj36c"; depends=[DelayedArray glmGamPoi HDF5Array Matrix MatrixGenerics Rcpp SummarizedExperiment]; };
  transite = derive2 { name="transite"; version="1.22.0"; sha256="15r8q0j7475ccq592fiqvcxkggb8zkg6lq3zmz65jljfdggj6kn4"; depends=[BiocGenerics Biostrings dplyr GenomicRanges ggplot2 gridExtra Rcpp scales TFMPvalue]; };
  transmogR = derive2 { name="transmogR"; version="1.0.0"; sha256="1531h4i6jn25r451ndf7jjscfbzs1k7477v0cn0rrr5hay8i2z3s"; depends=[Biostrings BSgenome GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 IRanges rlang S4Vectors scales SummarizedExperiment VariantAnnotation]; };
  transomics2cytoscape = derive2 { name="transomics2cytoscape"; version="1.14.0"; sha256="1f7qdymlgqh4la1rhlk5s580ka8p4f8ravm19i02ndx50jlnq12q"; depends=[dplyr KEGGREST pbapply purrr RCy3 tibble]; };
  traseR = derive2 { name="traseR"; version="1.34.0"; sha256="0v1w73s4b5zs863mdb6pwr2h9wq3wsbwqxbihig3sl6vc7i5v7da"; depends=[BSgenome_Hsapiens_UCSC_hg19 GenomicRanges IRanges]; };
  traviz = derive2 { name="traviz"; version="1.10.0"; sha256="1jjdfl8xvzlr31w74j12s5pdg5b1yylg1i30n804p9mqyx11g5sc"; depends=[Biobase ggplot2 mgcv princurve RColorBrewer rgl SingleCellExperiment slingshot SummarizedExperiment viridis]; };
  treeclimbR = derive2 { name="treeclimbR"; version="1.0.0"; sha256="1ynrc06f1dh1vaa24j25naydvj4lvygcv89ssz5gv0xpmr0ydlc1"; depends=[ape diffcyt dirmult dplyr edgeR ggnewscale ggplot2 ggtree rlang S4Vectors SummarizedExperiment tibble tidyr TreeSummarizedExperiment viridis]; };
  treeio = derive2 { name="treeio"; version="1.28.0"; sha256="0xfjq13yirfz7dzzlf2m60lk8xb3qh6k5hr66ygvjnm716x3vyh1"; depends=[ape dplyr jsonlite magrittr rlang tibble tidytree yulab_utils]; };
  treekoR = derive2 { name="treekoR"; version="1.12.0"; sha256="02mzd9ay9fij2qr9dkrg72h7yw9jpjmqx4gz0hsjpb03akc1npqw"; depends=[ape data_table diffcyt dplyr edgeR ggiraph ggplot2 ggtree hopach lme4 multcomp patchwork SingleCellExperiment tidyr]; };
  tricycle = derive2 { name="tricycle"; version="1.12.0"; sha256="11928pcd8xzmll28m0ihi3rasc4w1i0fshn4bh9n2lyigkr5ayi4"; depends=[AnnotationDbi circular dplyr GenomicRanges ggnewscale ggplot2 IRanges RColorBrewer S4Vectors scater scattermore SingleCellExperiment SummarizedExperiment]; };
  trigger = derive2 { name="trigger"; version="1.50.0"; sha256="1l3ln40r45rhbw8abk8l5xqighpfy3qk17830wk34ip0jzvvshqi"; depends=[corpcor qtl qvalue sva]; };
  trio = derive2 { name="trio"; version="3.42.0"; sha256="166pnyzjrahcx0zhmclxdawyhpvr8am0da8il3wm1bs6clp7af94"; depends=[LogicReg siggenes survival]; };
  triplex = derive2 { name="triplex"; version="1.44.0"; sha256="19xvhdwik9crz6w5cjfwsvwn42wkari3d360lmjms128qn266hbx"; depends=[Biostrings GenomicRanges IRanges S4Vectors XVector]; };
  tripr = derive2 { name="tripr"; version="1.10.0"; sha256="0lh2qlqi6rxq4v5cw4qr2syyjig7iy6z3pc0d6gpr4lbhwcm50d5"; depends=[config data_table dplyr DT golem gridExtra plot3D plotly plyr RColorBrewer shiny shinyBS shinyFiles shinyjs stringdist stringr]; };
  ttgsea = derive2 { name="ttgsea"; version="1.12.0"; sha256="1j09ircbzpvx661yrsnz7b6hxgsc0snm3q6gi72hcyjc9xgx46zs"; depends=[data_table DiagrammeR keras purrr stopwords text2vec textstem tm tokenizers]; };
  tweeDEseq = derive2 { name="tweeDEseq"; version="1.50.0"; sha256="0mmrp0x64k1cd0n7qqrpr191n57hciq75aw3gvfrplcfi75xb7q3"; depends=[cqn edgeR limma MASS Rcpp]; };
  twilight = derive2 { name="twilight"; version="1.80.0"; sha256="0r5nfr5r88xyvcrlzv8cmlnq5gcf98nqn3p028zc8dffslm6cbsq"; depends=[Biobase]; };
  twoddpcr = derive2 { name="twoddpcr"; version="1.28.0"; sha256="13if809c4nxf5cprps9p9w6z1r3xxjq556315wbkyh0pw724nki0"; depends=[class ggplot2 hexbin RColorBrewer S4Vectors scales shiny]; };
  txcutr = derive2 { name="txcutr"; version="1.10.0"; sha256="165yfhmw8j91bx0x7kasxyiwdiy7yxzzjg4vlyic0bf2f3xvyn1g"; depends=[AnnotationDbi BiocGenerics BiocParallel Biostrings GenomicFeatures GenomicRanges IRanges rtracklayer S4Vectors txdbmaker]; };
  txdbmaker = derive2 { name="txdbmaker"; version="1.0.0"; sha256="099x6v4crp953jcgqipj0001kxg7gv5h0r4mmvh1cg7j69w0zd5m"; depends=[AnnotationDbi Biobase BiocGenerics BiocIO biomaRt DBI GenomeInfoDb GenomicFeatures GenomicRanges httr IRanges rjson RSQLite rtracklayer S4Vectors UCSC_utils]; };
  tximeta = derive2 { name="tximeta"; version="1.22.1"; sha256="0lmkxl7zlp6z4i32jyy914kiwacnz89jnd2kqma81mq81r389p06"; depends=[AnnotationDbi AnnotationHub BiocFileCache Biostrings ensembldb GenomeInfoDb GenomicFeatures GenomicRanges IRanges jsonlite Matrix S4Vectors SummarizedExperiment tibble txdbmaker tximport]; };
  tximport = derive2 { name="tximport"; version="1.32.0"; sha256="0wayib05k976wivf9xgbfz5mfvi5hmxj3wm6zw031bj4w8dkc1v6"; depends=[]; };
  uSORT = derive2 { name="uSORT"; version="1.30.0"; sha256="04k0763dykakv03gxvlwsp6qlg6lpzd5512p5rdq2v5dk19scvm1"; depends=[Biobase BiocGenerics cluster fpc gplots igraph Matrix monocle plyr RANN RSpectra VGAM]; };
  uncoverappLib = derive2 { name="uncoverappLib"; version="1.14.0"; sha256="17p2aqpg3q6yqplw2haazm1hhr6s0nwhghcvn3j9128n5pg2j58x"; depends=[BiocFileCache condformat DT EnsDb_Hsapiens_v75 EnsDb_Hsapiens_v86 GenomicRanges Gviz Homo_sapiens markdown openxlsx org_Hs_eg_db OrganismDbi processx rappdirs rlist Rsamtools S4Vectors shiny shinyBS shinycssloaders shinyjs shinyWidgets stringr TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Hsapiens_UCSC_hg38_knownGene]; };
  universalmotif = derive2 { name="universalmotif"; version="1.22.0"; sha256="1kasmib3lp68pq5f9qzh38z7gpv8hik536iz16g8a73pc6bcbmzy"; depends=[BiocGenerics Biostrings ggplot2 IRanges MASS MatrixGenerics Rcpp RcppThread rlang S4Vectors yaml]; };
  updateObject = derive2 { name="updateObject"; version="1.8.0"; sha256="151nma7yyhk8s67bqim6jn86p85zdq7hj0xvvpnsl78bacncca8c"; depends=[BiocGenerics digest S4Vectors]; };
  variancePartition = derive2 { name="variancePartition"; version="1.34.0"; sha256="00hrizpx05jfh7yrab6na10zkahm8ibrbxy4pa4dcldw65klqmn9"; depends=[aod Biobase BiocParallel corpcor fANCOVA ggplot2 gplots iterators limma lme4 lmerTest MASS Matrix matrixStats pbkrtest Rdpack remaCor reshape2 RhpcBLASctl rlang scales]; };
  vbmp = derive2 { name="vbmp"; version="1.72.0"; sha256="0a21jpvg6jjv28gx30yrvm7wsc194jsdsxh0vhgk8j9rjlmlfp2y"; depends=[]; };
  velociraptor = derive2 { name="velociraptor"; version="1.14.0"; sha256="0sr796g3hak3vv014fvibi95fqayhjdp9qj1lyd84lc84rwhzli2"; depends=[basilisk BiocGenerics BiocParallel BiocSingular DelayedArray Matrix reticulate S4Vectors scuttle SingleCellExperiment SummarizedExperiment zellkonverter]; };
  veloviz = derive2 { name="veloviz"; version="1.10.0"; sha256="0bni9ykffsa4zazycaki74xxwps40ngsrvq32bdr4anyhya2nk1v"; depends=[igraph Matrix mgcv Rcpp RSpectra]; };
  vidger = derive2 { name="vidger"; version="1.24.0"; sha256="1ladsgxqmmff7rw6w3x8jyxba4mdk7bb4f4wgimwfgvyjmygsaqr"; depends=[Biobase DESeq2 edgeR GGally ggplot2 ggrepel knitr RColorBrewer rmarkdown scales SummarizedExperiment tidyr]; };
  viper = derive2 { name="viper"; version="1.38.0"; sha256="00cl6lbi56dbd8dilg0iczca87wr3572vq7i352mgfdinlw7fcyk"; depends=[Biobase e1071 KernSmooth mixtools]; };
  vissE = derive2 { name="vissE"; version="1.12.0"; sha256="1bw74vjag4g90d2s29w5j51dd30xqp6k6x6vwb0ihrxfvadns5dx"; depends=[ggforce ggplot2 ggraph ggrepel ggwordcloud GSEABase igraph msigdb plyr RColorBrewer reshape2 scales scico textstem tidygraph tm]; };
  vsclust = derive2 { name="vsclust"; version="1.6.0"; sha256="0kb63am4aa6gmlpbczdbmxc7vwnmnnkd78ql6nizd9sfixdmiqm5"; depends=[limma matrixStats MultiAssayExperiment qvalue Rcpp shiny]; };
  vsn = derive2 { name="vsn"; version="3.72.0"; sha256="1r6cd92d4xlx4zdyy1sfaxicjf4q3arflmswpdkckkc4h9c6zf8m"; depends=[affy Biobase ggplot2 lattice limma]; };
  vtpnet = derive2 { name="vtpnet"; version="0.44.0"; sha256="1fi4yjh7nvrq9fzba771i32p6qhq3cl7c9sil1hpc9l4k9bxfdfp"; depends=[doParallel foreach GenomicRanges graph gwascat]; };
  vulcan = derive2 { name="vulcan"; version="1.26.0"; sha256="1fimj4rbrw6wy1kl6is49v33y6c1s3n9nkanpqibkgk4g3cljxfa"; depends=[Biobase caTools ChIPpeakAnno csaw DESeq2 DiffBind GenomicRanges gplots locfit S4Vectors TxDb_Hsapiens_UCSC_hg19_knownGene viper wordcloud zoo]; };
  waddR = derive2 { name="waddR"; version="1.18.0"; sha256="160v6qqcx3fn657p7blq261nqclww2wic3gp0k855d3kx4i12i5l"; depends=[arm BiocFileCache BiocParallel eva Rcpp RcppArmadillo SingleCellExperiment]; };
  wateRmelon = derive2 { name="wateRmelon"; version="2.10.0"; sha256="19zlv9aglllsjq3jcnlw994bkanjdq0ib46k7wjsig04cx4apz1v"; depends=[Biobase IlluminaHumanMethylation450kanno_ilmn12_hg19 illuminaio limma lumi matrixStats methylumi ROC]; };
  wavClusteR = derive2 { name="wavClusteR"; version="2.38.0"; sha256="0yr4jfaxs253xg5q0kds8fm97kqacx67pw1c80yx2w79v7nqskgv"; depends=[BiocGenerics Biostrings foreach GenomicFeatures GenomicRanges ggplot2 Hmisc IRanges mclust Rsamtools rtracklayer S4Vectors seqinr stringr]; };
  weaver = derive2 { name="weaver"; version="1.70.0"; sha256="08k5pkd16n9jyf45y8wh8lzk7dwkkpiai87fnrxg440qjb91pzsm"; depends=[codetools digest]; };
  webbioc = derive2 { name="webbioc"; version="1.76.0"; sha256="1ws4w2kf514adk50sjadgasm7z1xvklcb8s243m12fvlg63dia9i"; depends=[affy annaffy Biobase BiocManager gcrma multtest qvalue vsn]; };
  weitrix = derive2 { name="weitrix"; version="1.16.0"; sha256="01jp94k2qlxbci1kidx4lnxkz0bf4vaj5p31c4brcmgrzv0a1pz4"; depends=[assertthat BiocGenerics BiocParallel Ckmeans_1d_dp DelayedArray DelayedMatrixStats dplyr ggplot2 glm2 limma purrr reshape2 RhpcBLASctl rlang S4Vectors scales SummarizedExperiment topconfects]; };
  widgetTools = derive2 { name="widgetTools"; version="1.82.0"; sha256="0knszrfapndnjzv5948qbfsjamlf7g04yry7yx294l8iwvwip6qv"; depends=[]; };
  wiggleplotr = derive2 { name="wiggleplotr"; version="1.28.0"; sha256="1px7rgvaj6kks6fp7yqsqjwy4knlzgllzxsiimv8nikmbd57dmi0"; depends=[assertthat cowplot dplyr GenomeInfoDb GenomicRanges ggplot2 IRanges purrr rtracklayer S4Vectors]; };
  wpm = derive2 { name="wpm"; version="1.14.0"; sha256="1623q58fjxnx1632fn5c5rhx0zpglbjpp7zqp15f2gch01ac0xdy"; depends=[Biobase cli config dplyr DT ggplot2 golem logging RColorBrewer rlang shiny shinycustomloader shinydashboard shinyWidgets stringr SummarizedExperiment]; };
  wppi = derive2 { name="wppi"; version="1.12.0"; sha256="1mvr5bpsng87yl1bhd22h45830vw3sla1ysnr29px13if2q5ylmy"; depends=[dplyr igraph logger magrittr Matrix OmnipathR progress purrr RCurl rlang tibble tidyr]; };
  xcms = derive2 { name="xcms"; version="4.2.2"; sha256="1zk9l4ll3047fj0rngvjka2hkg2by26n2h3xm1iyvfiw5068y74y"; depends=[Biobase BiocGenerics BiocParallel IRanges jsonlite lattice MassSpecWavelet MetaboCoreUtils MsCoreUtils MsExperiment MsFeatures MSnbase mzR progress ProtGenerics RColorBrewer S4Vectors Spectra SummarizedExperiment]; };
  xcore = derive2 { name="xcore"; version="1.8.0"; sha256="04156svl1cjbhy51d7fbgdilp832wfifg37yr9civ829iyi79fha"; depends=[DelayedArray edgeR foreach GenomicRanges glmnet IRanges iterators magrittr Matrix MultiAssayExperiment S4Vectors]; };
  xmapbridge = derive2 { name="xmapbridge"; version="1.62.0"; sha256="0laahd3v5m313q1iq259aikgqf7zlmpxyxhws2pr7vg97g37bbhs"; depends=[]; };
  yamss = derive2 { name="yamss"; version="1.30.0"; sha256="0l9wqijwlq1gwybj2fy6jwgq6ja1mvx8yfdv174g5mjflx8nmc06"; depends=[BiocGenerics data_table EBImage IRanges limma Matrix mzR S4Vectors SummarizedExperiment]; };
  yarn = derive2 { name="yarn"; version="1.30.0"; sha256="1r0dj65i8xg1yb6x7ggb3s40hvzbh596k2g9bxblsbl18z867ydp"; depends=[Biobase biomaRt downloader edgeR gplots limma matrixStats preprocessCore quantro RColorBrewer readr]; };
  zFPKM = derive2 { name="zFPKM"; version="1.26.0"; sha256="1pgmw41xdq9gd2shc6kawgxz9sw1ydlgs0p35k99k2v50f86r2wy"; depends=[checkmate dplyr ggplot2 SummarizedExperiment tidyr]; };
  zellkonverter = derive2 { name="zellkonverter"; version="1.14.0"; sha256="13qkj9adv5is4fas667kxzc2zgni3ayl5hbimakq8y4mw6qj04dn"; depends=[basilisk cli DelayedArray Matrix reticulate S4Vectors SingleCellExperiment SummarizedExperiment]; };
  zenith = derive2 { name="zenith"; version="1.6.0"; sha256="14mj5flig4f0s3qgny26wj8l50d5f8bdp66gnh83wsqnln784x8m"; depends=[EnrichmentBrowser ggplot2 GSEABase limma msigdbr progress Rdpack reshape2 Rfast tidyr variancePartition]; };
  zinbwave = derive2 { name="zinbwave"; version="1.26.0"; sha256="07zlvzfs1c4gcj9hwgqbjhgbrffi301620chrf5lvzly4v7hafwi"; depends=[BiocParallel edgeR genefilter Matrix SingleCellExperiment softImpute SummarizedExperiment]; };
  zlibbioc = derive2 { name="zlibbioc"; version="1.50.0"; sha256="155q6983xjdjpq445lpg5n9gzf8gr18nll6dmjk7jwdq7fdxb602"; depends=[]; };
  ABAEnrichment = derive2 { name="ABAEnrichment"; version="1.24.0"; sha256="1sp3f72rzlr822dxx42bswynrwwfx6f520hdhfdikqp13p2y4044"; depends=[ABAData data_table GOfuncR gplots gtools Rcpp]; broken = true; };
  ALPS = derive2 { name="ALPS"; version="1.5.0"; sha256="1aydvzc6x0871iasij68xqdlhjyg69qbqxm0qh1q52w8gj2nyq3p"; depends=[assertthat BiocParallel ChIPseeker corrplot data_table dplyr genefilter GenomicRanges GGally gghalves ggplot2 ggseqlogo Gviz magrittr org_Hs_eg_db plyr reshape2 rtracklayer stringr tibble tidyr TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Hsapiens_UCSC_hg38_knownGene]; broken = true; };
  ASpediaFI = derive2 { name="ASpediaFI"; version="1.11.0"; sha256="13jny6ca8hdf269z37baaggfs7jss00ln09apn42pj411g3p7nms"; depends=[BiocParallel biomaRt dplyr DRaWR e1071 fgsea GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 Gviz igraph IRanges IVAS limma Matrix reshape2 ROCR Rsamtools rtracklayer S4Vectors scales SummarizedExperiment]; broken = true; };
  AffyCompatible = derive2 { name="AffyCompatible"; version="1.58.0"; sha256="1bg7iqasvfsgd9x3ykgpblqnz1q06g3ifmzj4jf2kn8kxj63wfbl"; depends=[Biostrings RCurl XML]; broken = true; };
  ArrayExpressHTS = derive2 { name="ArrayExpressHTS"; version="1.47.0"; sha256="0fndc7xifzj2wq8si8q8zjjkly5ckgr28jrm3m887s7kivbvjzvv"; depends=[Biobase BiocGenerics biomaRt Biostrings bitops edgeR GenomicRanges Hmisc IRanges R2HTML RColorBrewer Rhtslib rJava Rsamtools sampling sendmailR ShortRead snow svMisc XML]; broken = true; };
  Autotuner = derive2 { name="Autotuner"; version="1.7.0"; sha256="0k07gs6bnxs0894iqi1lhk96mifjcdf68bv4q9fjv50nzqpzqd8l"; depends=[assertthat Biobase cluster entropy MSnbase mzR RColorBrewer scales]; broken = true; };
  BAC = derive2 { name="BAC"; version="1.58.0"; sha256="00dkhns9n1x4wmlxjcw75h7iwwk37zlv1c2fi0g1mmsw1xvdjzp6"; depends=[]; broken = true; };
  BDMMAcorrect = derive2 { name="BDMMAcorrect"; version="1.18.1"; sha256="17lsgl5mczfk2flkrclxhsqkkpr6mncccywm68l0z02pi5xhd8j7"; depends=[ape ellipse ggplot2 Rcpp RcppArmadillo RcppEigen SummarizedExperiment vegan]; broken = true; };
  BGmix = derive2 { name="BGmix"; version="1.59.0"; sha256="16fzgxcy4sk0kd67vzdxqz81s84dvh4bqss9cbl9bn6vhpfsnfyf"; depends=[KernSmooth]; broken = true; };
  BRGenomics = derive2 { name="BRGenomics"; version="1.14.1"; sha256="09kpb9jn84np1z8k72ngsbd0xx6v0x3kcl738wizr64w0j9zhlla"; depends=[DESeq2 GenomeInfoDb GenomicAlignments GenomicRanges IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment]; broken = true; };
  BgeeCall = derive2 { name="BgeeCall"; version="1.18.1"; sha256="1ipypkyfqx6mahiwl0gzdsi7z9j9cm5rgfw4ybgh6blfq8kg9qyk"; depends=[biomaRt Biostrings data_table dplyr GenomicFeatures jsonlite rhdf5 rslurm rtracklayer sjmisc tximport]; broken = true; };
  BioMM = derive2 { name="BioMM"; version="1.15.0"; sha256="01lfw0npcclcyqqh2xkhjq9jw0irbk13fsj5y1b3rz1amzzngg6p"; depends=[BiocParallel CMplot e1071 ggplot2 glmnet imager lattice nsprcomp precrec ranger rms topGO vioplot xlsx]; broken = true; };
  BioNetStat = derive2 { name="BioNetStat"; version="1.22.0"; sha256="1rbb36v64b9xbk2dsf6wsyrhwwbkysrj8fp1g22y3gisdk170sg8"; depends=[BiocParallel DT ggplot2 Hmisc igraph knitr markdown pathview pheatmap plyr psych RColorBrewer RJSONIO rmarkdown shiny shinyBS whisker yaml]; broken = true; };
  BioPlex = derive2 { name="BioPlex"; version="1.2.3"; sha256="0cn0x6ij2a3xy61bq0qy5amp0ipj4r4shh7g0vlwbkrclj9w347r"; depends=[BiocFileCache GenomeInfoDb GenomicRanges GEOquery graph SummarizedExperiment]; broken = true; };
  BioTIP = derive2 { name="BioTIP"; version="1.16.0"; sha256="1bbjfv3bi20xlk8h7r5ipav6mfs27lmj0zjb5mk1gmp071dmnk0y"; depends=[cluster GenomicRanges igraph MASS psych scran stringr]; broken = true; };
  BiocDockerManager = derive2 { name="BiocDockerManager"; version="1.11.0"; sha256="0w393f14i253pnk0jzf2ci4g5cnxshwdjmix2r8arlnadh7spjyk"; depends=[dplyr httr memoise readr whisker]; broken = true; };
  BitSeq = derive2 { name="BitSeq"; version="1.41.0"; sha256="185cssrvaw2x0r3y5fqnfqm31924ccwg33qpj3v8ywrh3x7qn22p"; depends=[IRanges Rhtslib Rsamtools S4Vectors]; broken = true; };
  BrainSABER = derive2 { name="BrainSABER"; version="1.8.0"; sha256="1nxcjvaip7pp387bhdc2pmjai3chib1n63ig0cslhppzzjp2y6jd"; depends=[BiocFileCache biomaRt data_table lsa S4Vectors shiny SummarizedExperiment]; broken = true; };
  CAnD = derive2 { name="CAnD"; version="1.27.0"; sha256="14x0m5iv7dm1iii5zsny9wnf4j5ddh0kij2jm658r3i4wnc99mkb"; depends=[ggplot2 reshape]; broken = true; };
  CNVgears = derive2 { name="CNVgears"; version="1.8.0"; sha256="1p7dxzkna3czkpsidj586hfwhymrjwvjr6q5f2pq7zlmpn6f8svx"; depends=[data_table ggplot2]; broken = true; };
  COHCAP = derive2 { name="COHCAP"; version="1.48.0"; sha256="1czbmjmrldp4xwf2pi542aqxxgjg34bvky716fjf5y3zxp4j5pnd"; depends=[BH COHCAPanno gplots RColorBrewer Rcpp RcppArmadillo WriteXLS]; broken = true; };
  CORREP = derive2 { name="CORREP"; version="1.68.0"; sha256="1ida60gpbkr5iyn74y6df8gd0znjkzbidyi7sz4my47fw4j8wrin"; depends=[e1071]; broken = true; };
  CSSP = derive2 { name="CSSP"; version="1.37.0"; sha256="08l8ag82n9hdrj31m37f4fm9kvxjx7xyprdlbi20aqrzsrd227gr"; depends=[]; broken = true; };
  CancerInSilico = derive2 { name="CancerInSilico"; version="2.18.0"; sha256="0szbz88wnr3dbf7k9bhihv6hkr29gsp9vrllr201wx5qfzl2gncy"; depends=[BH Rcpp]; broken = true; };
  CancerSubtypes = derive2 { name="CancerSubtypes"; version="1.26.0"; sha256="06lw7b43fwh554870w71i676q6gm6kx53580cgg17a7prdjndkmr"; depends=[cluster ConsensusClusterPlus impute limma NMF sigclust survival]; broken = true; };
  CellaRepertorium = derive2 { name="CellaRepertorium"; version="1.12.0"; sha256="0k9sxh0b9g2841zpkbmcc65v0kfyv1i6sxzdmbr49nzzm27xlbh2"; depends=[BiocGenerics Biostrings dplyr forcats generics glue Matrix progress purrr Rcpp reshape2 rlang S4Vectors stringr tibble tidyr]; broken = true; };
  Cepo = derive2 { name="Cepo"; version="1.8.0"; sha256="0s1zra4msgbp37r5lp0zs9j2aq054rcmrmhwi3liwp4wkvjbshw8"; depends=[BiocParallel DelayedArray DelayedMatrixStats dplyr ggplot2 GSEABase HDF5Array patchwork reshape2 rlang S4Vectors SingleCellExperiment SummarizedExperiment]; broken = true; };
  ChIC = derive2 { name="ChIC"; version="1.19.0"; sha256="0zbmhixxn3skn8csz93fyyfamz1n3gzjzb2caw8ybi2cysgzz5ys"; depends=[BiocGenerics caret caTools ChIC_data genomeIntervals GenomicRanges IRanges progress randomForest Rsamtools S4Vectors]; broken = true; };
  Clonality = derive2 { name="Clonality"; version="1.47.0"; sha256="0yxwwc0sl3impvzr0bmjmdn65z6qx6lf5pwik2p8wxxgaybvff9r"; depends=[DNAcopy]; broken = true; };
  CoRegNet = derive2 { name="CoRegNet"; version="1.38.0"; sha256="19df43l35dkf36dhq8fx8a9gm1grxymrmpcix0b4qmxrzwjp0s8k"; depends=[arules igraph shiny]; broken = true; };
  CoSIA = derive2 { name="CoSIA"; version="1.2.0"; sha256="14d7l88346wkh4fj9y4f2lywfqbawz60z86f6wm2r2vh8zhcbk8i"; depends=[AnnotationDbi annotationTools biomaRt dplyr ExperimentHub ggplot2 homologene magrittr org_Ce_eg_db org_Dm_eg_db org_Dr_eg_db org_Hs_eg_db org_Mm_eg_db org_Rn_eg_db plotly RColorBrewer readr stringr tibble tidyr tidyselect]; broken = true; };
  CompGO = derive2 { name="CompGO"; version="1.28.0"; sha256="16nlrk9wbxj51y8s7s58mdhpi70ghfacxi283406gwya3cm79f0n"; depends=[GenomicFeatures ggplot2 pathview pcaMethods reshape2 Rgraphviz rtracklayer TxDb_Mmusculus_UCSC_mm9_knownGene]; broken = true; };
  CopywriteR = derive2 { name="CopywriteR"; version="2.29.0"; sha256="1h4cyrjwdazgk49yzi9lvya8bfz9r4cpq19hyzikvc81ia8zdxs6"; depends=[BiocParallel chipseq CopyhelpeR data_table DNAcopy futile_logger GenomeInfoDb GenomicAlignments GenomicRanges gtools IRanges matrixStats Rsamtools S4Vectors]; broken = true; };
  CountClust = derive2 { name="CountClust"; version="1.21.0"; sha256="17px9jkpjwz0j2f5h8xv52wh24ilqvlb6dvczjc36lb7mq4cw3sq"; depends=[cowplot flexmix ggplot2 gtools limma maptpx picante plyr reshape2 slam SQUAREM]; broken = true; };
  CytoTree = derive2 { name="CytoTree"; version="1.6.0"; sha256="1dsdhwjkd3ngnw50fs6vz048afk47r95vhi0wqj8sip11nhndkd8"; depends=[Biobase BiocNeighbors cluster destiny flowCore FlowSOM flowUtils ggplot2 gmodels igraph limma Matrix matrixStats mclust pheatmap prettydoc RANN Rcpp Rtsne scatterpie scatterplot3d stringr sva umap]; broken = true; };
  DEComplexDisease = derive2 { name="DEComplexDisease"; version="1.18.0"; sha256="12gw9b0gdwyih51j2gzay6vxhycgc52n8svd0slv6wsbw5rc19lh"; depends=[BiocParallel ComplexHeatmap DESeq2 edgeR Rcpp SummarizedExperiment]; broken = true; };
  DMRforPairs = derive2 { name="DMRforPairs"; version="1.35.0"; sha256="1fdj2kk4hy1cy7lvxdcdigzvjsggsrchff10mccwwpycc4h115dj"; depends=[GenomicRanges Gviz R2HTML]; broken = true; };
  DeepBlueR = derive2 { name="DeepBlueR"; version="1.27.0"; sha256="03v1ag250zq8wj3fxnsg2ii8l93vq6dg9dxqyiqdjnbvxc0y26xg"; depends=[data_table diffr dplyr filehash foreach GenomeInfoDb GenomicRanges R_utils RCurl rjson rtracklayer settings stringr withr XML]; broken = true; };
  EBSeqHMM = derive2 { name="EBSeqHMM"; version="1.35.0"; sha256="1vgpda6h9caq67iqdd88mrhq8502jc056zf8fgwfgd8z9cayhsdn"; depends=[EBSeq]; broken = true; };
  EasyqpcR = derive2 { name="EasyqpcR"; version="1.31.0"; sha256="0lb2px789668fr1gxghycy7lbdkpwmippv6xmmwws6rbanvfd6v4"; depends=[matrixStats plotrix plyr]; broken = true; };
  EpiCompare = derive2 { name="EpiCompare"; version="1.6.7"; sha256="1vaxxikfvmi5n8s80df7sb2jqdvc8q66ybw8hshp79f98aiczfgc"; depends=[AnnotationHub BiocGenerics BRGenomics ChIPseeker data_table downloadthis genomation GenomeInfoDb GenomicRanges ggplot2 htmltools IRanges plotly reshape2 rmarkdown rtracklayer stringr]; broken = true; };
  FCBF = derive2 { name="FCBF"; version="2.8.0"; sha256="1clg3s2av70j0pm0yj0ckvlklkkg5zb0r057pz6wmklllfkmx1dv"; depends=[ggplot2 gridExtra mclust pbapply SummarizedExperiment]; broken = true; };
  FScanR = derive2 { name="FScanR"; version="1.10.0"; sha256="1v4iq2wlvxf0wbs2d9ip3pcfx3a533pqp4as9pr0f6q57cvqi2bs"; depends=[]; broken = true; };
  FindMyFriends = derive2 { name="FindMyFriends"; version="1.23.0"; sha256="0xbhl6ljxb522r5062vv6xdziaaqkkwylmvlymvc5f1grjz0a4z9"; depends=[Biobase BiocGenerics BiocParallel Biostrings digest dplyr filehash ggdendro ggplot2 gtable igraph IRanges kebabs Matrix Rcpp reshape2 S4Vectors]; broken = true; };
  FlowRepositoryR = derive2 { name="FlowRepositoryR"; version="1.23.0"; sha256="04lk2cahf6zqnhpzh0zwas4vmvaz4kcik9ri65bs9d9ximzjam91"; depends=[jsonlite RCurl XML]; broken = true; };
  FoldGO = derive2 { name="FoldGO"; version="1.18.0"; sha256="0h08yv1kykllaanc562ncwv3ajic7cd4wcqba24nlbh6agsazwyk"; depends=[ggplot2 tidyr topGO]; broken = true; };
  FunChIP = derive2 { name="FunChIP"; version="1.28.0"; sha256="1qhwabm7vgjqmgxdla6qs70sncvzjc8qh5vpq5xqp50hk1lli7f1"; depends=[doParallel fda foreach GenomeInfoDb GenomicAlignments GenomicRanges RColorBrewer Rcpp Rsamtools shiny]; broken = true; };
  GAPGOM = derive2 { name="GAPGOM"; version="1.11.0"; sha256="0sl97w5zx4zdrdbcwayqyvgxspaxpbils3mpsrim0zlspjrjcy6z"; depends=[AnnotationDbi Biobase BiocFileCache data_table dplyr fastmatch GEOquery GO_db GOSemSim graph igraph magrittr Matrix matrixStats org_Hs_eg_db org_Mm_eg_db plyr RBGL]; broken = true; };
  GCSConnection = derive2 { name="GCSConnection"; version="1.7.0"; sha256="1psmw3825whyzvbzqpqksgcl09b6kfyb8k5vny6ljkjbac1jzvnf"; depends=[googleAuthR googleCloudStorageR httr jsonlite Rcpp]; broken = true; };
  GCSFilesystem = derive2 { name="GCSFilesystem"; version="1.6.0"; sha256="0qk8xyg06f71y4r1q1zpcj89irh9i6cd9z6nqlx635x8if84sh6d"; depends=[]; broken = true; };
  GCSscore = derive2 { name="GCSscore"; version="1.14.0"; sha256="0fqr0sgplpbkdpvwgi8fpmwmnqja41622pvkkzsalbzai021hgp3"; depends=[affxparser Biobase BiocManager data_table devtools dplR RSQLite stringr]; broken = true; };
  GISPA = derive2 { name="GISPA"; version="1.26.0"; sha256="19vbcfdf959xs6kgds37ij3qay9x61dzrlvcs238m7hywl4dn3lz"; depends=[Biobase changepoint data_table genefilter GSEABase HH lattice latticeExtra plyr scatterplot3d]; broken = true; };
  GOSim = derive2 { name="GOSim"; version="1.40.0"; sha256="1izsjs3li1qcp2nfy7zk3zbf3hh7kq75r78ijbn5yln9fgs6mbv1"; depends=[annotate AnnotationDbi cluster corpcor flexmix GO_db graph Matrix org_Hs_eg_db RBGL Rcpp topGO]; broken = true; };
  GOsummaries = derive2 { name="GOsummaries"; version="2.37.0"; sha256="1r2a1bym6hwhah4gq47j7983znwsl3fwbhx9lw9j1nxm4ip0d7nr"; depends=[ggplot2 gProfileR gtable limma plyr Rcpp reshape2]; broken = true; };
  GRridge = derive2 { name="GRridge"; version="1.22.0"; sha256="0vmwm50dwk3im3qx40vh9ipmfqywzz5fmmm79b74zjcd3qjrznf3"; depends=[glmnet graph Iso mvtnorm penalized survival]; broken = true; };
  GeneAccord = derive2 { name="GeneAccord"; version="1.15.0"; sha256="1dlnqdcrl1fv5yf0zwfgkqfd2x19fv6q84p7c730nmnnaqal6md1"; depends=[biomaRt caTools dplyr ggplot2 ggpubr gtools magrittr maxLik RColorBrewer reshape2 tibble]; broken = true; };
  GeneAnswers = derive2 { name="GeneAnswers"; version="2.36.0"; sha256="1f8q3hi913khyy1cc3yp2635gaik47alsqmhi0mi24cy340faplz"; depends=[annotate Biobase downloader Heatplus igraph KEGGREST MASS RBGL RColorBrewer RCurl RSQLite XML]; broken = true; };
  GenoGAM = derive2 { name="GenoGAM"; version="2.11.0"; sha256="058qix2h0zm2k9csmbdhci2wqih3lyggjj591cqn0ls2nv7bnyvj"; depends=[BiocParallel Biostrings data_table DelayedArray DESeq2 futile_logger GenomeInfoDb GenomicAlignments GenomicRanges HDF5Array IRanges Matrix Rcpp RcppArmadillo rhdf5 Rsamtools S4Vectors sparseinv SummarizedExperiment]; broken = true; };
  HPAStainR = derive2 { name="HPAStainR"; version="1.9.0"; sha256="1bjysi3x8248f262v4rzi2y50rlzryb987wbvdjy6af84nq7hd09"; depends=[data_table dplyr scales shiny stringr tibble tidyr]; broken = true; };
  HTqPCR = derive2 { name="HTqPCR"; version="1.56.0"; sha256="14cff36ikbqhd5xizihpxzsv9jimcpbgnd381jd154pgi60bil0m"; depends=[affy Biobase gplots limma RColorBrewer]; broken = true; };
  IRISFGM = derive2 { name="IRISFGM"; version="1.8.0"; sha256="1n13rsbg5y0xnr6in18silifx8jhqzjj1vb5kpjgy5ml55im1s5r"; depends=[AdaptGauss AnnotationDbi anocva clusterProfiler colorspace DEsingle DrImpute ggplot2 ggpubr ggraph igraph knitr Matrix MCL mixtools org_Hs_eg_db org_Mm_eg_db pheatmap Polychrome RColorBrewer Rcpp scater scran Seurat SingleCellExperiment]; broken = true; };
  ImmuneSpaceR = derive2 { name="ImmuneSpaceR"; version="1.30.0"; sha256="0lhilrh4xyw1cvqnx4b6g0llm9b1i4l2r476d4hmypkkgl25q8n7"; depends=[Biobase curl data_table digest flowCore flowWorkspace ggplot2 gplots heatmaply httr jsonlite pheatmap plotly preprocessCore R6 Rlabkey rmarkdown scales]; broken = true; };
  IntOMICS = derive2 { name="IntOMICS"; version="1.2.0"; sha256="1qhni8p8zap9szi499jrdxkacdrb7vdd4va5h4n0kdi4qr80vrzh"; depends=[bestNormalize bnlearn bnstruct cowplot ggplot2 ggraph gplots igraph matrixStats numbers RColorBrewer rlang SummarizedExperiment]; broken = true; };
  IsoGeneGUI = derive2 { name="IsoGeneGUI"; version="2.31.0"; sha256="1w7zxsvmcrz8cj8g8xa1vqbzfycdhgsclhcjmkqjw1hwz6fp3xgn"; depends=[Biobase ff geneplotter goric Iso IsoGene jpeg multtest ORCME ORIClust RColorBrewer Rcpp relimp tkrplot xlsx]; broken = true; };
  LPEadj = derive2 { name="LPEadj"; version="1.62.0"; sha256="17m5lclr2rwb2z0i230gsxkccysmpcvsp4kxjpdjhvnikfm46ssp"; depends=[LPE]; broken = true; };
  LineagePulse = derive2 { name="LineagePulse"; version="1.21.0"; sha256="09x1i7slysqf3dpjzck6rgfzhyswaj0kk8i047yscg8fcaksbmqg"; depends=[BiocParallel circlize ComplexHeatmap ggplot2 gplots knitr Matrix RColorBrewer SingleCellExperiment SummarizedExperiment]; broken = true; };
  LowMACA = derive2 { name="LowMACA"; version="1.28.0"; sha256="0j5233xziszwak65rypd9f8lsp25sdr4j5nm5kanj4d4wd0zsdqv"; depends=[BiocParallel Biostrings cBioPortalData data_table gridBase httr LowMACAAnnotation motifStack plyr RColorBrewer reshape2 stringr]; broken = true; };
  MACPET = derive2 { name="MACPET"; version="1.15.1"; sha256="0742i3fxg2793lhgpxb4whh6mwvzd4bn86ykd0rv8sgilxyq5zsl"; depends=[BH bigmemory BiocParallel Biostrings futile_logger GenomeInfoDb GenomicAlignments GenomicRanges GEOquery gtools InteractionSet intervals IRanges knitr plyr Rbowtie Rcpp Rsamtools rtracklayer S4Vectors ShortRead]; broken = true; };
  MIGSA = derive2 { name="MIGSA"; version="1.21.0"; sha256="0b7w9lzi8xb1vzh7zahw7wh9jm7x1y04rs2gvvjmfbdfw085rdpm"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel data_table edgeR futile_logger ggdendro ggplot2 GO_db GOstats graph GSEABase ismev jsonlite limma matrixStats org_Hs_eg_db RBGL reshape2 Rgraphviz vegan]; broken = true; };
  MIMOSA = derive2 { name="MIMOSA"; version="1.37.0"; sha256="0dpz0r1kswdb4wzkpj5798gs627vzvvbwbkild2fc1gvmh9p8lwc"; depends=[Biobase coda data_table dplyr Formula ggplot2 MASS MCMCpack modeest plyr pracma Rcpp RcppArmadillo reshape rlang scales testthat tidyr]; broken = true; };
  MMAPPR2 = derive2 { name="MMAPPR2"; version="1.14.0"; sha256="14m41hi79f7m2qigjjcgy08awrf0654ridgm6wxcq8cmmlm68g8a"; depends=[Biobase BiocGenerics BiocParallel data_table dplyr ensemblVEP GenomeInfoDb GenomicRanges gmapR IRanges magrittr Rsamtools S4Vectors stringr tidyr VariantAnnotation VariantTools]; broken = true; };
  MQmetrics = derive2 { name="MQmetrics"; version="1.10.0"; sha256="15jkmdj2k5h8vbi332y7b4xzm2330g2s13l6lf2d1v9pg5aqrisq"; depends=[cowplot dplyr ggforce gghalves ggplot2 ggpubr ggrepel gridExtra gtable knitr magrittr plyr purrr RColorBrewer readr reshape2 rlang rmarkdown scales stringr tidyr]; broken = true; };
  MSEADbi = derive2 { name="MSEADbi"; version="1.2.0"; sha256="1g1kg3nh7iwg5nrpmig6srw6as4yfwmbqn965pffrk0zp19llsbf"; depends=[AnnotationDbi Biobase DBI RSQLite]; broken = true; };
  MSGFgui = derive2 { name="MSGFgui"; version="1.28.0"; sha256="0dkj2nbv5xv4v4bbmf91av0ryh9pxdfp7fmbqlma4xyf1r7zmx4c"; depends=[MSGFplus mzID mzR shiny shinyFiles xlsx]; broken = true; };
  MSGFplus = derive2 { name="MSGFplus"; version="1.28.0"; sha256="1k0qm049gk4gjhd88zhxxrpc944r7ndq8dys08ai2kbaqignvb7y"; depends=[mzID ProtGenerics]; broken = true; };
  MSstatsSampleSize = derive2 { name="MSstatsSampleSize"; version="1.13.0"; sha256="09gmlqxb65pa4wxh5bryb6lhs68zrfaqfl7n3k9shvzi3iw02vp3"; depends=[BiocParallel caret ggplot2 gridExtra MSstats reshape2]; broken = true; };
  MSstatsTMTPTM = derive2 { name="MSstatsTMTPTM"; version="1.1.2"; sha256="16qnddwhwhjjfr5akdrmp93gkxq2r41s82hb1blbz47lwbj5kaj5"; depends=[dplyr ggplot2 gridExtra MSstatsTMT Rcpp reshape2 stringr]; broken = true; };
  MetaVolcanoR = derive2 { name="MetaVolcanoR"; version="1.14.0"; sha256="11fxjv0kb65wc2237rh3340j72v3zsd4s019bi07rbpqnl246pnj"; depends=[cowplot data_table dplyr ggplot2 htmlwidgets metafor metap plotly rlang tidyr topconfects]; broken = true; };
  Metab = derive2 { name="Metab"; version="1.33.0"; sha256="0fid4b3yk56z2sm6hxfp0z30nqjsky9sv4x49x912bw61amvrwky"; depends=[pander svDialogs xcms]; broken = true; };
  MethCP = derive2 { name="MethCP"; version="1.11.0"; sha256="099jaadjfalvxpwq3k630yrqa1dfbp8rqn2fahz1rsha3y5z9bys"; depends=[BiocParallel bsseq DNAcopy DSS GenomeInfoDb GenomicRanges IRanges methylKit S4Vectors]; broken = true; };
  MobilityTransformR = derive2 { name="MobilityTransformR"; version="1.6.0"; sha256="1292fk08zi1zf0hdj56vzdgv9h9nr16vmbzypqkam7lvqqnig49h"; depends=[MetaboCoreUtils MSnbase Spectra xcms]; broken = true; };
  NBSplice = derive2 { name="NBSplice"; version="1.15.0"; sha256="0yn7s7igshall34cflmdwvmknv8h1zdi6vg8svvcyn9fvzlgjdm8"; depends=[BiocParallel car edgeR ggplot2 MASS reshape2]; broken = true; };
  NanoStringQCPro = derive2 { name="NanoStringQCPro"; version="1.32.0"; sha256="0k2sgs6d25ryjlm9c17nxqqcdi3q04j3y9qb1rig23jimfvs3xs9"; depends=[AnnotationDbi Biobase knitr NMF org_Hs_eg_db png RColorBrewer]; broken = true; };
  NeighborNet = derive2 { name="NeighborNet"; version="1.18.0"; sha256="046k1799wz77ww4jhf935pfz2637dmzy7p848iyjxj1yc5g51jq8"; depends=[graph]; broken = true; };
  NxtIRFcore = derive2 { name="NxtIRFcore"; version="1.6.0"; sha256="1x3645v6ar8mpmyk6hd5w3m38496g68l2vdh80vh0hhlqlrp17n2"; depends=[AnnotationHub BiocFileCache BiocGenerics BiocParallel Biostrings BSgenome data_table DelayedArray DelayedMatrixStats fst genefilter GenomeInfoDb GenomicRanges ggplot2 HDF5Array IRanges magrittr NxtIRFdata plotly R_utils Rcpp RcppProgress rhdf5 rtracklayer S4Vectors SummarizedExperiment zlibbioc]; broken = true; };
  ODER = derive2 { name="ODER"; version="1.6.0"; sha256="17c3hvdghli6i88yqy6dclzyad60s0d6y4hng6i4bycc9fnan41w"; depends=[BiocFileCache BiocGenerics dasper data_table derfinder dplyr GenomeInfoDb GenomicRanges ggplot2 ggpubr ggrepel IRanges magrittr megadepth plyr purrr rtracklayer S4Vectors stringr tibble]; broken = true; };
  OmicsLonDA = derive2 { name="OmicsLonDA"; version="1.15.0"; sha256="1kn26k0lnk7hgfzk1kh5bh41zkia8a4pzsfr35mbjrflcxmvgk2w"; depends=[BiocGenerics BiocParallel ggplot2 gss plyr pracma SummarizedExperiment zoo]; broken = true; };
  PERFect = derive2 { name="PERFect"; version="1.14.0"; sha256="0ygbirfnp122c8jzrig5cnm6rxyhz126ixl5ca49i13kizcv2ns9"; depends=[fitdistrplus ggplot2 Matrix phyloseq psych sn zoo]; broken = true; };
  PFP = derive2 { name="PFP"; version="1.7.0"; sha256="1328a73ggg7l1drjbmv67jcvlv83khn1k252mf81xj4gf213d0di"; depends=[clusterProfiler ggplot2 graph igraph KEGGgraph magrittr plyr tidyr]; broken = true; };
  PSEA = derive2 { name="PSEA"; version="1.36.0"; sha256="02gnxacnpzz74bk4y4nkd6pd8y8abi0988zf03x1mcgnn7hk1s2y"; depends=[Biobase MASS]; broken = true; };
  PSICQUIC = derive2 { name="PSICQUIC"; version="1.34.0"; sha256="0gkkxxbc2a7cin92qwn1masqfigyz9s4fhyy2daa17r3ckk4ccgx"; depends=[BiocGenerics biomaRt httr IRanges plyr RCurl]; broken = true; };
  PanVizGenerator = derive2 { name="PanVizGenerator"; version="1.22.0"; sha256="0rhx2jc5kc9bl00v16frh8b4075n0jqn4s37pkvqp3ypcbqws32d"; depends=[igraph jsonlite pcaMethods shiny]; broken = true; };
  Pi = derive2 { name="Pi"; version="2.14.0"; sha256="16jh7p3f6nk2hwvp44b9sas1dl618m520xj553x9dkaj77jmzp6d"; depends=[BiocGenerics caret dplyr GenomeInfoDb GenomicRanges ggnetwork ggplot2 ggrepel glmnet igraph IRanges lattice MASS Matrix osfr plot3D purrr randomForest RCircos readr ROCR scales supraHex tibble tidyr]; broken = true; };
  PloGO2 = derive2 { name="PloGO2"; version="1.14.0"; sha256="0r0zf8dfb4pv4hv5fp5v61i3q5bnzwxws1v3cnx7l64b0hjl2ffi"; depends=[GO_db GOstats httr lattice openxlsx xtable]; broken = true; };
  PoTRA = derive2 { name="PoTRA"; version="1.13.0"; sha256="1a32d1wndb24pxza3h53yddj9z2clff5srny2k00pbbfq1h99mjf"; depends=[BiocGenerics graph graphite igraph org_Hs_eg_db]; broken = true; };
  PrecisionTrialDrawer = derive2 { name="PrecisionTrialDrawer"; version="1.11.0"; sha256="1miw8rj1zn1xv97dkgs66k9g21i6gp3j2m1l1akysskczgam3i2c"; depends=[BiocParallel biomaRt brglm data_table DT GenomicRanges ggplot2 ggrepel googleVis httr IRanges jsonlite LowMACAAnnotation magrittr matrixStats RColorBrewer reshape2 S4Vectors shiny shinyBS stringr XML]; broken = true; };
  ProteomicsAnnotationHubData = derive2 { name="ProteomicsAnnotationHubData"; version="1.24.0"; sha256="0qs5hbx7pww7qxxaimp2xqvs3lwcd41ndls0xcvvlk7pnp4i4sk8"; depends=[AnnotationHub AnnotationHubData Biobase BiocManager Biostrings GenomeInfoDb MSnbase mzR RCurl]; broken = true; };
  PubScore = derive2 { name="PubScore"; version="1.8.0"; sha256="18bmzvv6mxrdlh297i29q24vi5rc4x2mjaryi5asiki186x0hy8d"; depends=[dplyr ggplot2 ggrepel igraph intergraph network progress rentrez sna]; broken = true; };
  RGalaxy = derive2 { name="RGalaxy"; version="1.38.0"; sha256="0vfsn8cj5c8n58ra1qz85gwmm1747lm3xdz17m20f73g8q78nymd"; depends=[Biobase BiocGenerics optparse roxygen2 XML]; broken = true; };
  RIPAT = derive2 { name="RIPAT"; version="1.10.0"; sha256="154a79xyihxkg3sbwxz9ch0ixqlqv9gwkpsv88i55c75qyzkx2sm"; depends=[biomaRt GenomicRanges ggplot2 IRanges karyoploteR openxlsx plyr regioneR rtracklayer stringr]; broken = true; };
  RLSeq = derive2 { name="RLSeq"; version="1.5.2"; sha256="0nhip321gbv6phwdwi3qkbmhnfh7fhb9md6xs4lklskwkkrd7s1q"; depends=[AnnotationHub aws_s3 callr caretEnsemble circlize ComplexHeatmap dplyr GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 ggplotify ggprism pheatmap RColorBrewer regioneR rtracklayer valr VennDiagram]; broken = true; };
  RNASeqR = derive2 { name="RNASeqR"; version="1.16.0"; sha256="0m7d3mm644n81630v2m6vv7798x3rjshb9jcp63xq631j1wmk63i"; depends=[ballgown Biostrings clusterProfiler corrplot DESeq2 DOSE edgeR factoextra FactoMineR ggplot2 gridExtra org_Hs_eg_db org_Sc_sgd_db pathview PerformanceAnalytics pheatmap rafalib reshape2 reticulate Rsamtools stringr systemPipeR systemPipeRdata]; broken = true; };
  RandomWalkRestartMH = derive2 { name="RandomWalkRestartMH"; version="1.22.0"; sha256="0mvh22p0dliwapdgbl5r93dpjdfnvnxdv5ig3y9gd2ndn32h1cyc"; depends=[igraph Matrix]; broken = true; };
  Rcade = derive2 { name="Rcade"; version="1.39.1"; sha256="05cli4h96xcsf6xas9z5ma8bzh10grlwkfgmz4a115ykblwyaj4r"; depends=[baySeq GenomeInfoDb GenomicAlignments GenomicRanges IRanges plotrix rgl Rsamtools S4Vectors]; broken = true; };
  ReQON = derive2 { name="ReQON"; version="1.48.0"; sha256="0w28b3ma8r8rshijdm5jj1z64v91my7hcvw18r9pdwjprh05bw0g"; depends=[rJava Rsamtools seqbias]; broken = true; };
  RefPlus = derive2 { name="RefPlus"; version="1.70.0"; sha256="0ii4pki0gqsfcjlfwq5hx67yf0id2krrgs8qnss4gijj27m8h86m"; depends=[affy affyPLM Biobase preprocessCore]; broken = true; };
  Rgin = derive2 { name="Rgin"; version="1.15.0"; sha256="1x5zj2d5rvsr2xh0ifpnrys9v91dal1xxhv5mmk16rs8wzwqpqba"; depends=[RcppEigen]; broken = true; };
  Ringo = derive2 { name="Ringo"; version="1.66.0"; sha256="1ch0akd4k1i4401jwxll5awlq7g12pw7x0kidarn5zva08jgiixd"; depends=[Biobase BiocGenerics genefilter lattice limma Matrix RColorBrewer vsn]; broken = true; };
  Risa = derive2 { name="Risa"; version="1.44.0"; sha256="140q4x4sl7mffpglwy7hx0z5la2rkq0p1j22k36a4h1073wcpc2q"; depends=[affy Biobase biocViews Rcpp xcms]; broken = true; };
  RmiR = derive2 { name="RmiR"; version="1.49.0"; sha256="16nwh4a97qvyicm4f102xs52lx8cld0b80fykgil86kkd6v8zlja"; depends=[DBI RmiR_Hs_miRNA]; broken = true; };
  RpsiXML = derive2 { name="RpsiXML"; version="2.38.0"; sha256="0x4nph4xss4piq4fgijjjj33yrqqfdbsgn9wvqy17nglvz5gi7bi"; depends=[annotate AnnotationDbi Biobase graph hypergraph RBGL XML]; broken = true; };
  SANTA = derive2 { name="SANTA"; version="2.38.0"; sha256="0gm9i0pj3c9sir8pmh12b62ah6x1gvy1lrp9hc6hg9rkh4gpyr0y"; depends=[igraph Matrix]; broken = true; };
  SCATE = derive2 { name="SCATE"; version="1.10.0"; sha256="1fkswn9xlbr4mrnr62yzk51dri7rzbvf28whh7qhdfxgyvavw439"; depends=[GenomicAlignments GenomicRanges mclust preprocessCore Rtsne SCATEData splines2 xgboost]; broken = true; };
  SEPIRA = derive2 { name="SEPIRA"; version="1.20.0"; sha256="1yhlm6l9jv8fhdhnhpj7r8cdpnrp1la287x85gcssqjnv5v4k047"; depends=[corpcor limma]; broken = true; };
  SGCP = derive2 { name="SGCP"; version="1.2.0"; sha256="1cc0brhw77b73nircb3n2ghbihdjmk7l11s8nmkvljydx6b52sja"; depends=[annotate caret DescTools dplyr expm genefilter ggplot2 ggridges GO_db GOstats graph openxlsx org_Hs_eg_db plyr RColorBrewer reshape2 Rgraphviz RSpectra SummarizedExperiment xtable]; broken = true; };
  SISPA = derive2 { name="SISPA"; version="1.30.0"; sha256="0glqk2p06brw9a9prccil02z82nhq2izh2sgfrlmi1kpf8mgszl3"; depends=[changepoint data_table genefilter ggplot2 GSVA plyr]; broken = true; };
  SLGI = derive2 { name="SLGI"; version="1.54.0"; sha256="03jwdq4k44rys3f773c6l985a6v1bacbdghw97p0qpwspmzra8rs"; depends=[AnnotationDbi Biobase BiocGenerics GO_db lattice]; broken = true; };
  SMAP = derive2 { name="SMAP"; version="1.66.0"; sha256="0m6jvb3jpnk36cv8grj1s3af6nm9xnn3x0mxkrwfbpgzvcn5735n"; depends=[]; broken = true; };
  SPONGE = derive2 { name="SPONGE"; version="1.22.0"; sha256="1ayvigqj5j7s7031gpyhaz3m3z85w9j8j850pggshy9gixvy1mnp"; depends=[Biobase biomaRt caret ComplexHeatmap cvms data_table doRNG dplyr expm foreach ggplot2 ggpubr ggridges glmnet gRbase igraph iterators logging MASS MetBrewer miRBaseConverter ppcor randomForest rlang stringr tidyr tidyverse tnet]; broken = true; };
  SQUADD = derive2 { name="SQUADD"; version="1.52.0"; sha256="0vg7mhx2aldk53jdgy4k8yk3jyjwklmp13mxch7cxinr8bzbyjh6"; depends=[RColorBrewer]; broken = true; };
  STAN = derive2 { name="STAN"; version="2.26.2"; sha256="0dd4hb2iabvnr6v0ys4jslj7611z1hii8hxkdvwrjbz4nn678wkv"; depends=[BiocGenerics GenomeInfoDb GenomicRanges Gviz IRanges poilog Rsolnp S4Vectors]; broken = true; };
  STROMA4 = derive2 { name="STROMA4"; version="1.24.0"; sha256="1x3zgxkcck8ffh89mql45cp54c94n64kf9x6dan9wl24bj3x869f"; depends=[Biobase BiocParallel cluster matrixStats]; broken = true; };
  ScISI = derive2 { name="ScISI"; version="1.65.0"; sha256="0q3bbfsink5d8xslhp129qwvlq5mdzw8zkv9msd0q8qmkclsbiz1"; depends=[annotate AnnotationDbi apComplex GO_db org_Sc_sgd_db RpsiXML]; broken = true; };
  SimBindProfiles = derive2 { name="SimBindProfiles"; version="1.40.0"; sha256="0adcyw4x7yw4v20bwx4fzrhqd7g1r9fhpr1nqqnwkg44b51rdm6z"; depends=[Biobase limma mclust Ringo]; broken = true; };
  SpidermiR = derive2 { name="SpidermiR"; version="1.32.0"; sha256="07s421c8ashww8x99ac18fy1lvjl4zmm3jsz0fggw1gvii172c1x"; depends=[AnnotationDbi gdata httr igraph miRNAtap miRNAtap_db org_Hs_eg_db]; broken = true; };
  StarBioTrek = derive2 { name="StarBioTrek"; version="1.28.0"; sha256="0cpgn0zcimg18yybfgrjzdczsinvx6n81jjm850gbi76ararq8sc"; depends=[AnnotationDbi e1071 ggplot2 graphite igraph MLmetrics reshape2 ROCR SpidermiR]; broken = true; };
  SummarizedBenchmark = derive2 { name="SummarizedBenchmark"; version="2.20.0"; sha256="16gzlkyf76fcd46ck417sxh86smivmaggqvyg0v9v0f4jac7610g"; depends=[BiocGenerics BiocParallel crayon digest dplyr ggplot2 mclust rlang S4Vectors sessioninfo stringr SummarizedExperiment tibble tidyr UpSetR]; broken = true; };
  Sushi = derive2 { name="Sushi"; version="1.34.0"; sha256="0adswrbzd93rhy3q56ypwkrk6155vd4zxapvznswyjlxp8ha813q"; depends=[biomaRt zoo]; broken = true; };
  SwimR = derive2 { name="SwimR"; version="1.29.0"; sha256="0n58x3i4k3icvhg8z60zlhpszv8bb9pain07nl9rszyvmpi71vg2"; depends=[gplots R2HTML signal]; broken = true; };
  TCGAbiolinksGUI = derive2 { name="TCGAbiolinksGUI"; version="1.23.0"; sha256="16757szccczlv1q35y1cnmlkr12s46f63z7ijffpb15q85xlaqdx"; depends=[caret clusterProfiler colourpicker data_table downloader DT ELMER ggplot2 ggrepel maftools pathview plotly readr sesame shiny shinyBS shinydashboard shinyFiles shinyjs stringr SummarizedExperiment TCGAbiolinks TCGAbiolinksGUI_data]; broken = true; };
  TDARACNE = derive2 { name="TDARACNE"; version="1.47.0"; sha256="19zf7x2wcfnij1nlh623kim63d6wb3p42mwsn35msds778jvcbxq"; depends=[Biobase Rgraphviz]; broken = true; };
  TNBC_CMS = derive2 { name="TNBC.CMS"; version="1.18.0"; sha256="1syygq9br5icbjbmi1kq9gs7g3bw1vzmy8mlf8ga2rk1lw6ika90"; depends=[e1071 forestplot GGally ggplot2 ggpubr GSVA pheatmap pracma quadprog R_utils RColorBrewer SummarizedExperiment survival]; broken = true; };
  TSRchitect = derive2 { name="TSRchitect"; version="1.20.0"; sha256="1v9zz8ny9rwkyz98cv49l9ilh68h8mvm2x44n8i8rvjayc50zi9i"; depends=[AnnotationHub BiocGenerics BiocParallel dplyr GenomeInfoDb GenomicAlignments GenomicRanges gtools IRanges readxl Rsamtools rtracklayer S4Vectors SummarizedExperiment]; broken = true; };
  TarSeqQC = derive2 { name="TarSeqQC"; version="1.28.0"; sha256="14ima8ymdb91lpkhdnsg6q7ajxs5p1xzzcsjfhixxkm341k45j35"; depends=[BiocGenerics BiocParallel Biostrings cowplot GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 Hmisc IRanges openxlsx plyr reshape2 Rsamtools S4Vectors]; broken = true; };
  TimeSeriesExperiment = derive2 { name="TimeSeriesExperiment"; version="1.13.0"; sha256="0bdpxxr739qdg92qabfx122k9f43vw2hyxp4yxqlbp37vzgcdf2c"; depends=[DESeq2 dplyr dynamicTreeCut edgeR ggplot2 Hmisc limma magrittr proxy S4Vectors SummarizedExperiment tibble tidyr vegan viridis]; broken = true; };
  TimiRGeN = derive2 { name="TimiRGeN"; version="1.11.0"; sha256="104j3rdl1mfklqvpsr753zlplr001cqbkphbhf2xrcfw8si7bgr2"; depends=[biomaRt clusterProfiler dplyr FreqProf ggdendro gghighlight ggplot2 gplots gtools igraph Mfuzz MultiAssayExperiment RCy3 readxl reshape2 rWikiPathways scales stringr tidyr]; broken = true; };
  TnT = derive2 { name="TnT"; version="1.24.0"; sha256="1y4v2rphdils0rvkjsyfynncvmn1js1n5d5qhqmc2v8rhh1wjyv5"; depends=[Biobase data_table GenomeInfoDb GenomicRanges htmlwidgets IRanges jsonlite knitr S4Vectors]; broken = true; };
  TraRe = derive2 { name="TraRe"; version="1.5.0"; sha256="06w5rk2wjam5dhiya9n6kjbjahw4i46cb05zvakcy0f8gwrvb9ic"; depends=[BiocParallel dqrng ggplot2 glmnet gplots gtools hash igraph matrixStats pvclust R_utils SummarizedExperiment]; broken = true; };
  Travel = derive2 { name="Travel"; version="1.6.0"; sha256="074v9hl4gzy8081mlas3mjaplchjrmk2bl4f5nkdjclh46xf3wgg"; depends=[Rcpp]; broken = true; };
  XCIR = derive2 { name="XCIR"; version="1.7.0"; sha256="0n42pw01wv1sk06hby9kwijx6zwaw4lrlpsa0wlkrkf323slkllw"; depends=[biomaRt data_table ggplot2 IRanges readxl S4Vectors seqminer VariantAnnotation]; broken = true; };
  affyPara = derive2 { name="affyPara"; version="1.51.0"; sha256="01165f84snc3ksk0ghw631i2l5jklp4n826jwy5926wvxy3zlwz0"; depends=[affy affyio aplpack snow vsn]; broken = true; };
  alpine = derive2 { name="alpine"; version="1.26.0"; sha256="1md4m9ln1mpxf7d2h7jnsjyi4zrviiqn9fzk1gkz2n6qj7jwpqbb"; depends=[Biostrings GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges graph IRanges RBGL Rsamtools S4Vectors speedglm stringr SummarizedExperiment]; broken = true; };
  alsace = derive2 { name="alsace"; version="1.30.0"; sha256="17adr64g3l2syj0shi57nrvx105w7wrkiqm0qp3hwlk1ivmnadzn"; depends=[ALS ptw]; broken = true; };
  beadarraySNP = derive2 { name="beadarraySNP"; version="1.68.0"; sha256="1vrizh7fpzv1w2gki0qxhphrfj1jj6m6bjsjsbw0b4n4invybzps"; depends=[Biobase quantsmooth]; broken = true; };
  bigPint = derive2 { name="bigPint"; version="1.15.0"; sha256="1r9gr5f9as09ifagal5k7713h95qjw508cf8ny3j1jmqd24v6xhs"; depends=[DelayedArray dplyr GGally ggplot2 gridExtra hexbin Hmisc htmlwidgets plotly plyr RColorBrewer reshape shiny shinycssloaders shinydashboard stringr SummarizedExperiment tidyr]; broken = true; };
  biodbMirbase = derive2 { name="biodbMirbase"; version="1.5.0"; sha256="17clip9l8as9pz390bqgj07jxp1rijis2f5hj53s6vqaqmiyz4il"; depends=[biodb chk R6 stringr]; broken = true; };
  brainflowprobes = derive2 { name="brainflowprobes"; version="1.16.0"; sha256="06gga72ns7h9c6mdbvbj8afpkyizg7maazriilvaq433h6s1pgqb"; depends=[Biostrings BSgenome_Hsapiens_UCSC_hg19 bumphunter cowplot derfinder derfinderPlot GenomicRanges GenomicState ggplot2 RColorBrewer]; broken = true; };
  bridge = derive2 { name="bridge"; version="1.62.0"; sha256="02rf15f3r1kazxml8mk9mi1zxgglsdfrpbg7ny9w0s65f413grg8"; depends=[rama]; broken = true; };
  caOmicsV = derive2 { name="caOmicsV"; version="1.25.0"; sha256="10i4imjihmssdwfys21fsqng8zfp7sxzkc58m8qmnh6s5sccb3sz"; depends=[bc3net igraph]; broken = true; };
  cellTree = derive2 { name="cellTree"; version="1.27.0"; sha256="0yfr59fcbdj03ikkpvw1qcxqrjbkz7nkfmb5m1xr4k9qs39bq9sb"; depends=[gplots igraph maptpx slam topGO topicmodels xtable]; broken = true; };
  chromswitch = derive2 { name="chromswitch"; version="1.22.0"; sha256="007wa8980hkpja33ph3b3fjsjrf91cnwc0a7y4014k8xxmmgfdh7"; depends=[Biobase BiocParallel cluster dplyr GenomicRanges gplots IRanges lazyeval magrittr matrixStats NMF rtracklayer S4Vectors tidyr]; broken = true; };
  cliqueMS = derive2 { name="cliqueMS"; version="1.16.0"; sha256="1829i6vqplqyvibb7x6ahb7xk0z2s8amivjldnvr17d7hpggmqma"; depends=[BH igraph matrixStats MSnbase Rcpp RcppArmadillo xcms]; broken = true; };
  clonotypeR = derive2 { name="clonotypeR"; version="1.34.0"; sha256="15nnj6c23bcnln1xsmxs7f13m13lvn6did7lvp7ij8gcb0vg2g6q"; depends=[]; broken = true; };
  coMET = derive2 { name="coMET"; version="1.34.0"; sha256="1pkhnfcvrbj9y88qbbvly4arbz22x8zkx0jsvsmn5klg4xp11fdz"; depends=[biomaRt corrplot GenomicRanges gridExtra Gviz hash IRanges psych rtracklayer S4Vectors]; broken = true; };
  coexnet = derive2 { name="coexnet"; version="1.19.1"; sha256="0zw8a8pqmajqnv5n6i7fn7krwax81sd4c6wqm4zr61fy2blqzv3h"; depends=[acde affy Biobase GEOquery igraph limma minet rmarkdown siggenes STRINGdb SummarizedExperiment vsn]; broken = true; };
  compartmap = derive2 { name="compartmap"; version="1.18.0"; sha256="0lvgwnp5cgn96m9y4snpczfbfs72lxbaa36lnmwa7j07jy4s9108"; depends=[BiocSingular DelayedArray DelayedMatrixStats GenomicRanges ggplot2 HDF5Array Matrix RaggedExperiment reshape2 RMTstat rtracklayer scales SummarizedExperiment]; broken = true; };
  conclus = derive2 { name="conclus"; version="1.5.0"; sha256="09rk73sxqxsy0zq07n67jxqbzb1rlxlj0phg6987szdjwxmag6jc"; depends=[AnnotationDbi Biobase BiocFileCache biomaRt clusterProfiler dbscan doParallel dplyr factoextra foreach fpc GEOquery ggplot2 gridExtra org_Hs_eg_db org_Mm_eg_db pheatmap rlang Rtsne scales scater scran SingleCellExperiment stringr SummarizedExperiment]; broken = true; };
  contiBAIT = derive2 { name="contiBAIT"; version="1.30.0"; sha256="1asyfx0mbg0pli2g533xmlppfw0s0f1y4vf2rfrnai4chsh1rh0k"; depends=[BH BiocGenerics BiocParallel clue cluster colorspace data_table diagram DNAcopy exomeCopy GenomicAlignments GenomicFiles GenomicRanges ggplot2 gplots gtools IRanges Rcpp reshape2 Rsamtools rtracklayer S4Vectors TSP]; broken = true; };
  copynumber = derive2 { name="copynumber"; version="1.38.0"; sha256="1a664bllaq9pbb5cpd01j919qirylvnm8qd49lwlz89jvqjdri19"; depends=[BiocGenerics GenomicRanges IRanges S4Vectors]; broken = true; };
  crisprseekplus = derive2 { name="crisprseekplus"; version="1.26.0"; sha256="1ccz944jwlcnflrdh1aamfc5b03n6pys65b13f049f0x214vqg68"; depends=[AnnotationDbi BiocManager BSgenome CRISPRseek DT GenomicFeatures GenomicRanges GUIDEseq hash shiny shinyjs]; broken = true; };
  ctgGEM = derive2 { name="ctgGEM"; version="1.7.0"; sha256="0hmapz96r024r3bws1wf0spd0i81viyma859y9nn93jrwxscrcdb"; depends=[Biobase BiocGenerics igraph Matrix monocle sincell SummarizedExperiment TSCAN]; broken = true; };
  dasper = derive2 { name="dasper"; version="1.9.0"; sha256="095ldl40cay5n8lkp8y69lbmflhnbwm1b075s4zgpagn81awp0cn"; depends=[basilisk BiocFileCache BiocParallel data_table dplyr GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 ggpubr ggrepel IRanges magrittr megadepth plyranges readr reticulate rtracklayer S4Vectors stringr SummarizedExperiment tidyr]; broken = true; };
  deco = derive2 { name="deco"; version="1.13.0"; sha256="0d4abif3v62cbas6hl7pfw8q8jihh7nsra76k9cm6kz54qw4fbnw"; depends=[ade4 AnnotationDbi Biobase BiocParallel BiocStyle cluster foreign gdata ggplot2 gplots gridExtra limma locfit made4 RColorBrewer reshape2 scatterplot3d sfsmisc SummarizedExperiment]; broken = true; };
  diffloop = derive2 { name="diffloop"; version="1.24.0"; sha256="0v0jg9y08xzw775x2lm82ig1ag4wjf4z2l6a66zmk6qbn59dwj1g"; depends=[Biobase biomaRt data_table dplyr edgeR foreach GenomeInfoDb GenomicRanges ggplot2 IRanges limma locfit matrixStats pbapply plyr readr reshape2 rtracklayer S4Vectors statmod Sushi]; broken = true; };
  dpeak = derive2 { name="dpeak"; version="1.12.0"; sha256="1fx2rrcqmjckk5kk3mfa56b1393b2c8sf566q95d8zmlsvkl03w5"; depends=[BSgenome IRanges MASS Rcpp]; broken = true; };
  dualKS = derive2 { name="dualKS"; version="1.53.0"; sha256="16cfcylmmcj8x2808529lbpm7qbbrxygic0jkaglhqcdxgrqw3rw"; depends=[affy Biobase]; broken = true; };
  eegc = derive2 { name="eegc"; version="1.26.0"; sha256="0m67zjsq2xzk292rp0hdlj8lbfgci2dsdb5hmn4b591fqawwsqbb"; depends=[AnnotationDbi clusterProfiler DESeq2 DOSE edgeR ggplot2 gplots igraph limma org_Hs_eg_db org_Mm_eg_db pheatmap R_utils S4Vectors sna wordcloud]; broken = true; };
  enrichTF = derive2 { name="enrichTF"; version="1.18.0"; sha256="0lhmlxw7mpb76w2agm25v5qzxgf28wfw2xc0fnlqn2sbbfj295y9"; depends=[BiocGenerics BSgenome clusterProfiler GenomeInfoDb GenomicRanges ggplot2 ggpubr heatmap3 IRanges JASPAR2018 magrittr motifmatchr pipeFrame R_utils rmarkdown rtracklayer S4Vectors TFBSTools]; broken = true; };
  epihet = derive2 { name="epihet"; version="1.13.0"; sha256="1p5sgb438yj6h0fv0v17dhz1pl32vai5zcbmgpgagrd5829a6a7r"; depends=[data_table doParallel foreach GenomicRanges ggplot2 igraph IRanges pheatmap qvalue ReactomePA Rtsne S4Vectors WGCNA]; broken = true; };
  exomeCopy = derive2 { name="exomeCopy"; version="1.48.0"; sha256="1d3qkr05q8nl3fj0y4qib0q37pwjh004p746nnzk8fmms75l1p11"; depends=[GenomeInfoDb GenomicRanges IRanges Rsamtools]; broken = true; };
  exomePeak2 = derive2 { name="exomePeak2"; version="1.14.3"; sha256="1hvz18hlvljbv0cmdlxzvsl2ysb5m0c5qq2y8jxzsby3zxlqplph"; depends=[BiocGenerics BiocParallel Biostrings BSgenome DESeq2 GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 IRanges magrittr mclust Rsamtools rtracklayer S4Vectors speedglm SummarizedExperiment]; broken = true; };
  farms = derive2 { name="farms"; version="1.52.0"; sha256="1w1bw8bglcmjsz83vc8s5wl1c58x2bvd365k984pxaw3xl9fj92j"; depends=[affy Biobase MASS]; broken = true; };
  fcoex = derive2 { name="fcoex"; version="1.13.0"; sha256="085r5s5sqrj2701zk5kv3818ksxvxzd76lknzi6bk1svw4d3lsyc"; depends=[clusterProfiler data_table dplyr FCBF ggplot2 ggrepel igraph intergraph Matrix network pathwayPCA progress scales SingleCellExperiment sna stringr]; broken = true; };
  flowCL = derive2 { name="flowCL"; version="1.35.0"; sha256="1jxr0zn3fgm5nqishssxh332mmxfz3fc9zgshn0lbq4avxc2x128"; depends=[graph Rgraphviz]; broken = true; };
  flowMap = derive2 { name="flowMap"; version="1.38.0"; sha256="1mjv55cg5q6gx32sn6h5aqzrpjb5awb6489j8dya56fbivjs7zxj"; depends=[abind ade4 doParallel Matrix reshape2 scales]; broken = true; };
  flowUtils = derive2 { name="flowUtils"; version="1.59.0"; sha256="11x362dqb9mjlsbq6g1qkb8hhnkvm22z5s3wkgmpyy9kyifjkm26"; depends=[Biobase corpcor flowCore graph RUnit XML]; broken = true; };
  gaggle = derive2 { name="gaggle"; version="1.70.0"; sha256="16jajl03nf8fk29vd4bkj4f1156258skkw3p884ad946ifvabznd"; depends=[graph rJava RUnit]; broken = true; };
  gaia = derive2 { name="gaia"; version="2.39.0"; sha256="023mw2dy6dni7h7a1ild1y6l741kp9bmjzzfyi70jipji1jig4pa"; depends=[]; broken = true; };
  genbankr = derive2 { name="genbankr"; version="1.27.0"; sha256="0fv87cf2y10ijlb0g1x9g9wh95qyljqb1c7k1ihbnjcg36xkh8lc"; depends=[Biobase BiocGenerics Biostrings GenomeInfoDb GenomicFeatures GenomicRanges IRanges rtracklayer S4Vectors VariantAnnotation]; broken = true; };
  genotypeeval = derive2 { name="genotypeeval"; version="1.30.0"; sha256="0mi1d86i4v8gafwszy978n61s5pszrsmbh1in4nggdqwvwnvkqnl"; depends=[BiocGenerics BiocParallel GenomeInfoDb GenomicRanges ggplot2 IRanges rtracklayer VariantAnnotation]; broken = true; };
  genphen = derive2 { name="genphen"; version="1.24.0"; sha256="1m60qagcxviix4zjzfhvrwchbjq2clss6mivb8q07bcq369yw1b8"; depends=[Biostrings doParallel e1071 foreach ranger Rcpp rPref rstan]; broken = true; };
  gpart = derive2 { name="gpart"; version="1.13.0"; sha256="1518wjkaw22ckgpwl6si83bhijvib0r0kgs9s4das41f0ygi92sd"; depends=[AnnotationDbi biomaRt data_table GenomicRanges Homo_sapiens igraph IRanges OrganismDbi Rcpp TxDb_Hsapiens_UCSC_hg38_knownGene]; broken = true; };
  gprege = derive2 { name="gprege"; version="1.39.0"; sha256="12yjyb7a7jc86hdi3a3cavqxfzkhmds1m2vigzw5ihhx6028pa78"; depends=[]; broken = true; };
  imageHTS = derive2 { name="imageHTS"; version="1.48.0"; sha256="124pksw08b88bj7l8pckzvgk6sf54d633cnbq2r5il7a09i4caim"; depends=[Biobase cellHTS2 e1071 EBImage hwriter vsn]; broken = true; };
  inveRsion = derive2 { name="inveRsion"; version="1.43.0"; sha256="0h2q10xf4x22hy7780w4pvq488921wzjngly8qcc97sa8iacssk3"; depends=[haplo_stats]; broken = true; };
  iterClust = derive2 { name="iterClust"; version="1.24.0"; sha256="0k2hcc7g4ynd9jrk8f286y6gwc4bfs4bnfs8qpj2i8zamwdaldng"; depends=[Biobase cluster]; broken = true; };
  iteremoval = derive2 { name="iteremoval"; version="1.15.1"; sha256="0bwl8lzxvf5azwyacv9x16l4kyi8l00xny2s83gp2kng5gyz8602"; depends=[GenomicRanges ggplot2 magrittr SummarizedExperiment]; broken = true; };
  logitT = derive2 { name="logitT"; version="1.58.0"; sha256="0wd26k2n29i58iz9nr50xjsvc2s5ynbca0y2y4j9xqbvvpfjzk3v"; depends=[affy]; broken = true; };
  mAPKL = derive2 { name="mAPKL"; version="1.28.0"; sha256="0nj2r54djps19lar2sp6bhdi5nkid195xyaqzzam2r7piwr8xv8s"; depends=[AnnotationDbi apcluster Biobase clusterSim e1071 igraph limma multtest parmigene reactome_db]; broken = true; };
  maanova = derive2 { name="maanova"; version="1.68.2"; sha256="1rcxvv0vcvksswjd3vry68nmvrbh05p5pica48bwcar93jh70bx9"; depends=[Biobase]; broken = true; };
  macat = derive2 { name="macat"; version="1.76.0"; sha256="1xmlh1bnhaxp2zjimrhyzz0ldl2sv4j0lrrvqdhlk8jbm5j4hzy8"; depends=[annotate Biobase]; broken = true; };
  maigesPack = derive2 { name="maigesPack"; version="1.64.0"; sha256="106idgazh2wkv2z63wrbn6f4gaxzkmn95i8583a99f6mqnfbhcqx"; depends=[convert graph limma marray]; broken = true; };
  mbOmic = derive2 { name="mbOmic"; version="1.3.0"; sha256="079qs5apyqli7h16c6drmhibmc356rnllxks5ddfnnq7hdzmhdbw"; depends=[cluster clusterSim data_table doParallel igraph psych visNetwork WGCNA]; broken = true; };
  metagene = derive2 { name="metagene"; version="2.31.0"; sha256="0kydqb2g1xbkwk5g738f1pyx1hcfmym3z101vawvcjmmgld3kcp8"; depends=[BiocParallel data_table EnsDb_Hsapiens_v86 ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 gplots IRanges magrittr matrixStats purrr R6 Rsamtools rtracklayer stringr]; broken = true; };
  metavizr = derive2 { name="metavizr"; version="1.21.0"; sha256="1d88f854sn5m2pklsyvkmq05yzjanxlnkz5gpzban62qq1mpvims"; depends=[Biobase data_table digest epivizr epivizrData epivizrServer epivizrStandalone GenomeInfoDb httr metagenomeSeq phyloseq vegan]; broken = true; };
  methyAnalysis = derive2 { name="methyAnalysis"; version="1.34.0"; sha256="05k3n7iy5ijidbnblbqqas8dsj8drwzbhyrbs8wl1ypkg51havi0"; depends=[annotate AnnotationDbi Biobase BiocGenerics biomaRt genefilter GenomeInfoDb GenomicFeatures GenomicRanges Gviz IRanges lumi methylumi org_Hs_eg_db rtracklayer SummarizedExperiment VariantAnnotation]; broken = true; };
  miRBaseConverter = derive2 { name="miRBaseConverter"; version="1.24.0"; sha256="04yjfi670lqk4c254isadzaj1mp514i4ns9h7mwdyvagfq6vhsvw"; depends=[]; broken = true; };
  miRmine = derive2 { name="miRmine"; version="1.22.0"; sha256="1d0ni3lavpiv2qzwlmrsjym75cip3i9q1bg9rwa04h61rz2smylg"; depends=[SummarizedExperiment]; broken = true; };
  miRspongeR = derive2 { name="miRspongeR"; version="2.4.0"; sha256="1mzh0cjm2sbcxw3wgfa6yg98ynl74x41g15vsf54n1m1ys5s7xk0"; depends=[clusterProfiler corpcor doParallel DOSE foreach igraph linkcomm MCL org_Hs_eg_db Rcpp ReactomePA SPONGE survival]; broken = true; };
  multiOmicsViz = derive2 { name="multiOmicsViz"; version="1.24.0"; sha256="129k094ml403w25k3kipzbavx78p14jxq40a8d733qyqp8mcnlrs"; depends=[doParallel foreach SummarizedExperiment]; broken = true; };
  multiSight = derive2 { name="multiSight"; version="1.7.0"; sha256="1v2ml1qh250lidm5a0xw4b3xbxd2as86p703qn5s8m1xi6l89b9c"; depends=[anyLib biosigner caret clusterProfiler config DESeq2 dplyr DT easyPubMed enrichplot ggnewscale golem htmltools igraph infotheo metap mixOmics networkD3 ppcor R6 ReactomePA rmarkdown rWikiPathways shiny shinydashboard stringr]; broken = true; };
  nanotatoR = derive2 { name="nanotatoR"; version="1.18.0"; sha256="1nnh4g4b7k6mp922pr52sxlrh6wvfyx7jhckmwrd12l1yjq010pb"; depends=[AnnotationDbi curl dplyr GenomicRanges hash httr knitr openxlsx org_Hs_eg_db rentrez rlang stringr testthat tidyverse XML]; broken = true; };
  netOmics = derive2 { name="netOmics"; version="1.8.0"; sha256="03nyjvcr2hldsfifj0dix1bc79z05i9x2hgc5z2g9hd1jyijljyd"; depends=[AnnotationDbi dplyr ggplot2 GO_db gprofiler2 igraph magrittr minet purrr RandomWalkRestartMH tibble tidyr]; broken = true; };
  netbiov = derive2 { name="netbiov"; version="1.36.0"; sha256="0igqb3wdxvjrbh4w664934yycac3qwcyfhmsz4cf2h5rif23xagf"; depends=[igraph]; broken = true; };
  netboxr = derive2 { name="netboxr"; version="1.9.0"; sha256="1brnm60745s2axls4p6qcxipjjr3ph9ijg1q604fgm42rf6i7qzm"; depends=[clusterProfiler data_table DT gplots igraph jsonlite plyr RColorBrewer]; broken = true; };
  networkBMA = derive2 { name="networkBMA"; version="2.35.0"; sha256="0xa0b977apbr6p9kqk38582af635kp99csj32bsn2bf8pjsmd4d2"; depends=[BH BMA leaps Rcpp RcppArmadillo RcppEigen]; broken = true; };
  nondetects = derive2 { name="nondetects"; version="2.32.0"; sha256="0302mg5pbvbzp9rhm6wg4lfa7c7lkndysx35x8b1zskc4b1v76cv"; depends=[arm Biobase HTqPCR limma mvtnorm]; broken = true; };
  oneSENSE = derive2 { name="oneSENSE"; version="1.20.0"; sha256="1lzb8i3frv3va2q28glwnjwszrynhky5y8fx10q4h52p2wqgc4v3"; depends=[flowCore gplots plotly Rtsne scatterplot3d shiny shinyFiles webshot]; broken = true; };
  pathVar = derive2 { name="pathVar"; version="1.30.0"; sha256="1q0m4yb4jvi61f3hl7mpbnl9y0y4pqhspi1gn3wp5lf86j8c40jp"; depends=[data_table EMT ggplot2 gridExtra Matching mclust]; broken = true; };
  perturbatr = derive2 { name="perturbatr"; version="1.13.0"; sha256="0ssk8cr42hibn917s2z2nzcdan54c7xiydypbi8f3g4w68q4ly31"; depends=[assertthat diffusr doParallel dplyr foreach formula_tools ggplot2 igraph lazyeval lme4 magrittr rlang scales tibble tidyr]; broken = true; };
  phemd = derive2 { name="phemd"; version="1.18.0"; sha256="174jp26insq2mwf9yw9bls4i9b2a8vccfkrg2h1dzvyyk513bi83"; depends=[Biobase BiocGenerics cluster cowplot destiny ggplot2 igraph maptree monocle phateR pheatmap pracma RANN RColorBrewer reticulate Rtsne S4Vectors scatterplot3d Seurat SingleCellExperiment SummarizedExperiment transport VGAM]; broken = true; };
  pkgDepTools = derive2 { name="pkgDepTools"; version="1.63.0"; sha256="10q0z1ps073py82zqii4sfdhnpvcyj4sx1yx3lzy5c41l8py6lag"; depends=[graph RBGL]; broken = true; };
  plethy = derive2 { name="plethy"; version="1.36.0"; sha256="09929w6rd84hvz6fiydd5v0php9gvbvxgvsnxvkzwyxfmmmx1dzr"; depends=[Biobase BiocGenerics DBI ggplot2 IRanges plyr RColorBrewer reshape2 RSQLite S4Vectors Streamer]; broken = true; };
  ppiStats = derive2 { name="ppiStats"; version="1.62.0"; sha256="0w5gkfah2y50x4wj5fn8i6ycx1x013mn9w4bs8r2vfqabpws1a81"; depends=[Biobase Category graph lattice RColorBrewer]; broken = true; };
  predictionet = derive2 { name="predictionet"; version="1.40.0"; sha256="1f3ghlcfnls9mx2hbs923rdz7kn0wdhy2csp1y1286c5q5dybrgh"; depends=[catnet igraph MASS penalized RBGL]; broken = true; };
  proBatch = derive2 { name="proBatch"; version="1.14.0"; sha256="079dh61v1dmsasrh5sn6sn1rgi34mavxa1sc1y8x6wqjwabm4w1j"; depends=[Biobase corrplot data_table dplyr ggfortify ggplot2 lazyeval lubridate magrittr pheatmap preprocessCore purrr pvca RColorBrewer reshape2 rlang scales sva tibble tidyr viridis wesanderson WGCNA]; broken = true; };
  proFIA = derive2 { name="proFIA"; version="1.23.0"; sha256="0y08vj401f45dvgxjwjx94hvd0rk1wljk8n1irpkdafg24gv4fvj"; depends=[Biobase BiocParallel minpack_lm missForest pracma ropls xcms]; broken = true; };
  proteasy = derive2 { name="proteasy"; version="1.2.0"; sha256="1mfk69k44krdj4wp6xpil391j9jrppyx1crvra525p8hahzc2d5m"; depends=[AnnotationFilter data_table EnsDb_Hsapiens_v86 EnsDb_Mmusculus_v79 EnsDb_Rnorvegicus_v79 ensembldb Rcpi stringr]; broken = true; };
  pulsedSilac = derive2 { name="pulsedSilac"; version="1.9.1"; sha256="1zb8xzs9h4rcrnmsfvrwb1qixn3jbnzxdwqgdrb82hgmxabmajlb"; depends=[cowplot ggplot2 ggridges MuMIn R_utils robustbase S4Vectors SummarizedExperiment UpSetR]; broken = true; };
  pwrEWAS = derive2 { name="pwrEWAS"; version="1.14.0"; sha256="1913h2syad9mfspxjvmrwm0mrcklbcl89lj04rn5x0xgfk8rk58a"; depends=[abind BiocManager CpGassoc doParallel doSNOW foreach genefilter ggplot2 limma pwrEWAS_data shiny shinyBS shinyWidgets truncnorm]; broken = true; };
  qrqc = derive2 { name="qrqc"; version="1.52.0"; sha256="0411477y7nazlwbz3pfszr1wfas6qd0g0iz0p9pmq16dw8pzkgg6"; depends=[Biostrings biovizBase brew ggplot2 plyr reshape Rhtslib testthat xtable]; broken = true; };
  rama = derive2 { name="rama"; version="1.72.0"; sha256="0i6crxnzhwxnc55xh2rv36jfwh4bd30alw1f05ixdrxwqwsslbpy"; depends=[]; broken = true; };
  restfulSE = derive2 { name="restfulSE"; version="1.24.0"; sha256="0i40yfvynxy34jfkvzyvjwvxf89zi4pvy9m9i0bk93l17gyhnjyl"; depends=[AnnotationDbi AnnotationHub bigrquery Biobase DBI DelayedArray dplyr ExperimentHub GO_db magrittr reshape2 rhdf5client rlang S4Vectors SummarizedExperiment]; broken = true; };
  rqt = derive2 { name="rqt"; version="1.28.0"; sha256="02yvwp68c0xx1wa41hfwmq5zjskqk3jg6z1hvivi6x3l5g2xfwah"; depends=[car CompQuadForm glmnet Matrix metap pls ropls RUnit SummarizedExperiment]; broken = true; };
  savR = derive2 { name="savR"; version="1.37.0"; sha256="13wiw7isdmpwhynxjrhimy9yglcz1108k7nwa98vq9czq49zpada"; depends=[ggplot2 gridExtra reshape2 scales XML]; broken = true; };
  scAlign = derive2 { name="scAlign"; version="1.12.0"; sha256="1mlhxwsfrmhysa5mcyx7vf2jn49snf41yb7xqmyi40wilj9h8qlb"; depends=[FNN ggplot2 irlba purrr Rtsne Seurat SingleCellExperiment tensorflow]; broken = true; };
  scClassifR = derive2 { name="scClassifR"; version="1.2.0"; sha256="0p9l9q5ina0axrqvqn1y5wkfqi0nacxm3nm6ny34j53znv07b2zz"; depends=[ape caret data_tree dplyr e1071 ggplot2 kernlab pROC ROCR Seurat SingleCellExperiment SummarizedExperiment]; broken = true; };
  scClassify = derive2 { name="scClassify"; version="1.14.0"; sha256="1il45fr3fq520jg2hi1b729wg82vhr826x9bh6lli743sjl2rmbf"; depends=[BiocParallel Cepo cluster diptest ggplot2 ggraph hopach igraph limma Matrix mgcv minpack_lm mixtools proxy proxyC S4Vectors statmod]; broken = true; };
  scMAGeCK = derive2 { name="scMAGeCK"; version="1.9.1"; sha256="1i6l8jxrd66aqk3m9212wsi8jqklvs0agsqrllvf9mrh16js4vby"; depends=[ggplot2 Seurat]; broken = true; };
  seqCNA = derive2 { name="seqCNA"; version="1.48.0"; sha256="0qqkpgpjj2rywr1y1qj3ffjlxak7fg15jkznz62r7k6r794z45ma"; depends=[adehabitatLT doSNOW GLAD seqCNA_annot]; broken = true; };
  seqbias = derive2 { name="seqbias"; version="1.50.0"; sha256="18pdpi855y1hhka96xc5886nqffjn1jhz9jr9p305iikdrsvmjp1"; depends=[Biostrings GenomicRanges Rhtslib zlibbioc]; broken = true; };
  sigPathway = derive2 { name="sigPathway"; version="1.66.2"; sha256="0k86hlz7zbbw7559bd2sl59pr441kihgwvg8nr75mj8d50n783sy"; depends=[]; broken = true; };
  slinky = derive2 { name="slinky"; version="1.12.0"; sha256="05ywydvyz3jnzbhabhz1sd61hpy9nb22512zpbi48mv5wic1sv3v"; depends=[curl dplyr foreach httr jsonlite readr rhdf5 SummarizedExperiment tidyr]; broken = true; };
  snapCGH = derive2 { name="snapCGH"; version="1.72.0"; sha256="0knjspxzc3z5dhx0a6kx9rkic85w65l84vy552x5bv8jzxkcwrsj"; depends=[aCGH cluster DNAcopy GLAD limma tilingArray]; broken = true; };
  sojourner = derive2 { name="sojourner"; version="1.11.0"; sha256="1s0iqzn65s9g4yymy059z122i9wvgkcb5718snzxhj7mkqjzwhhc"; depends=[dplyr EBImage fitdistrplus ggplot2 gridExtra lattice MASS mclust minpack_lm mixtools mltools nls2 pixmap plyr R_matlab Rcpp reshape2 rlang scales shiny shinyjs sp truncnorm]; broken = true; };
  sparseDOSSA = derive2 { name="sparseDOSSA"; version="1.24.0"; sha256="1xy9kd5a9vilwkgr4xw6lcdwgwykg7q7kildpfw4gqymd1frnjp6"; depends=[MASS MCMCpack optparse tmvtnorm]; broken = true; };
  sscore = derive2 { name="sscore"; version="1.72.0"; sha256="02y684iaryms7099k9idrvw0my52jj3d4hl949ai1jknaa19hmil"; depends=[affy affyio]; broken = true; };
  tenXplore = derive2 { name="tenXplore"; version="1.24.0"; sha256="1sk8xxvrmxkqlz7hq6w10hsjf1x8g06gbaas75hx4m0f1hz6pdwm"; depends=[AnnotationDbi matrixStats ontoProc org_Mm_eg_db restfulSE shiny SummarizedExperiment]; broken = true; };
  tofsims = derive2 { name="tofsims"; version="1.22.0"; sha256="0da4843wbcr821yp8z3z4vd81qpm2lblckgd01fm89lmwj393z65"; depends=[ALS alsace KernSmooth ProtGenerics Rcpp RcppArmadillo signal]; broken = true; };
  trena = derive2 { name="trena"; version="1.22.2"; sha256="1xjhqm2g53kgcnnqhs5l3vn525h7amaz4hvsskjp5zb0gkfpiwh1"; depends=[AnnotationDbi biomaRt Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 BSgenome_Hsapiens_UCSC_hg38 BSgenome_Mmusculus_UCSC_mm10 DBI GenomicRanges glmnet lassopv MotifDb org_Hs_eg_db randomForest RMySQL RPostgreSQL RSQLite SNPlocs_Hsapiens_dbSNP150_GRCh38 WGCNA xgboost]; broken = true; };
  tscR = derive2 { name="tscR"; version="1.11.0"; sha256="19jpmyb6dly7l0418c1z0dlb936wjh6nwkb0mvk13ym19qgv1my7"; depends=[class cluster dplyr dtw GenomicRanges ggplot2 gridExtra IRanges knitr latex2exp prettydoc RColorBrewer rmarkdown S4Vectors SummarizedExperiment]; broken = true; };
  tspair = derive2 { name="tspair"; version="1.53.0"; sha256="04xxrm313mnknhc38vl1sx6hic2g1x1xaa5772qlc7ip957hz85k"; depends=[Biobase]; broken = true; };
  unifiedWMWqPCR = derive2 { name="unifiedWMWqPCR"; version="1.38.0"; sha256="0v3jpnm3nq66xvckmc8447xl7wngfhhiwq6vjx54wgc6f586vmgd"; depends=[BiocGenerics HTqPCR]; broken = true; };
}