106 lines
2.4 KiB
Nix
106 lines
2.4 KiB
Nix
{ lib
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, buildPythonPackage
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, fetchFromGitHub
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, fetchpatch
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, pytestCheckHook
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, writeText
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, autograd
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, cma
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, cython
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, deprecated
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, dill
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, matplotlib
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, nbformat
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, notebook
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, numba
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, numpy
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, pandas
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, scipy
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}:
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buildPythonPackage rec {
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pname = "pymoo";
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version = "0.6.0.1";
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format = "setuptools";
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src = fetchFromGitHub {
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owner = "anyoptimization";
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repo = "pymoo";
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rev = version;
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hash = "sha256-+qtW7hfSo266n1SRzAgHIu99W5Sl+NYbKOHXv/JI9IA=";
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};
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pymoo_data = fetchFromGitHub {
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owner = "anyoptimization";
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repo = "pymoo-data";
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rev = "33f61a78182ceb211b95381dd6d3edee0d2fc0f3";
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hash = "sha256-iGWPepZw3kJzw5HKV09CvemVvkvFQ38GVP+BAryBSs0=";
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};
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patches = [
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# https://github.com/anyoptimization/pymoo/pull/407
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(fetchpatch {
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url = "https://github.com/anyoptimization/pymoo/commit/be57ece64275469daece1e8ef12b2b6ee05362c9.diff";
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hash = "sha256-BLPrUqNbAsAecfYahESEJF6LD+kehUYmkTvl/nvyqII=";
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})
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];
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postPatch = ''
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substituteInPlace setup.py \
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--replace "cma==3.2.2" "cma" \
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--replace "'alive-progress'," ""
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substituteInPlace pymoo/util/display/display.py \
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--replace "from pymoo.util.display.progress import ProgressBar" "" \
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--replace "ProgressBar() if progress else None" \
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"print('Missing alive_progress needed for progress=True!') if progress else None"
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'';
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nativeBuildInputs = [
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cython
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];
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propagatedBuildInputs = [
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autograd
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cma
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deprecated
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dill
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matplotlib
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numpy
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scipy
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];
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doCheck = true;
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preCheck = ''
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substituteInPlace pymoo/config.py \
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--replace "https://raw.githubusercontent.com/anyoptimization/pymoo-data/main/" \
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"file://$pymoo_data/"
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'';
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nativeCheckInputs = [
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pytestCheckHook
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nbformat
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notebook
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numba
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];
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# Select some lightweight tests
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pytestFlagsArray = [
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"-m 'not long'"
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];
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disabledTests = [
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# ModuleNotFoundError: No module named 'pymoo.cython.non_dominated_sorting'
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"test_fast_non_dominated_sorting"
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"test_efficient_non_dominated_sort"
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];
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# Avoid crashing sandboxed build on macOS
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MATPLOTLIBRC=writeText "" ''
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backend: Agg
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'';
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pythonImportsCheck = [ "pymoo" ];
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meta = with lib; {
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description = "Multi-objective Optimization in Python";
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homepage = "https://pymoo.org/";
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license = licenses.asl20;
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maintainers = with maintainers; [ veprbl ];
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};
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}
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