75 lines
1.6 KiB
Nix
75 lines
1.6 KiB
Nix
{ lib
|
|
, buildPythonPackage
|
|
, fetchFromGitHub
|
|
, pythonOlder
|
|
, pytestCheckHook
|
|
, matplotlib
|
|
, pydicom
|
|
, python-dateutil
|
|
, setuptools
|
|
}:
|
|
|
|
let
|
|
deid-data = buildPythonPackage rec {
|
|
pname = "deid-data";
|
|
version = "unstable-2022-12-06";
|
|
format = "pyproject";
|
|
disabled = pythonOlder "3.7";
|
|
|
|
nativeBuildInputs = [ setuptools ];
|
|
propagatedBuildInputs = [ pydicom ];
|
|
|
|
src = fetchFromGitHub {
|
|
owner = "pydicom";
|
|
repo = "deid-data";
|
|
rev = "5750d25a5048fba429b857c16bf48b0139759644";
|
|
hash = "sha256-c8NBAN53NyF9dPB7txqYtM0ac0Y+Ch06fMA1LrIUkbc=";
|
|
};
|
|
|
|
meta = {
|
|
description = "Supplementary data for deid package";
|
|
homepage = "https://github.com/pydicom/deid-data";
|
|
license = lib.licenses.mit;
|
|
maintainers = [ lib.maintainers.bcdarwin ];
|
|
};
|
|
};
|
|
in
|
|
buildPythonPackage rec {
|
|
pname = "deid";
|
|
version = "0.3.22";
|
|
|
|
format = "pyproject";
|
|
disabled = pythonOlder "3.7";
|
|
|
|
# Pypi version has no tests
|
|
src = fetchFromGitHub {
|
|
owner = "pydicom";
|
|
repo = pname;
|
|
# the github repo does not contain Pypi version tags:
|
|
rev = "40dc96125daeb65856d643e12c3d6dfec756be0d";
|
|
hash = "sha256-OtxQPF29eqt8I1Q12ga8a1IjBVO+VBk6y0DQmRtCNoU=";
|
|
};
|
|
|
|
propagatedBuildInputs = [
|
|
matplotlib
|
|
pydicom
|
|
python-dateutil
|
|
];
|
|
|
|
nativeCheckInputs = [
|
|
deid-data
|
|
pytestCheckHook
|
|
];
|
|
|
|
pythonImportsCheck = [
|
|
"deid"
|
|
];
|
|
|
|
meta = with lib; {
|
|
description = "Best-effort anonymization for medical images";
|
|
mainProgram = "deid";
|
|
homepage = "https://pydicom.github.io/deid";
|
|
license = licenses.mit;
|
|
maintainers = with maintainers; [ bcdarwin ];
|
|
};
|
|
}
|