37 lines
1.1 KiB
Nix
37 lines
1.1 KiB
Nix
{ lib, stdenv, fetchFromGitHub, fetchpatch, cmake, zlib }:
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stdenv.mkDerivation rec {
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pname = "megahit";
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version = "1.2.9";
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src = fetchFromGitHub {
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owner = "voutcn";
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repo = "megahit";
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rev = "v${version}";
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sha256 = "1r5d9nkdmgjsbrpj43q9hy3s8jwsabaz3ji561v18hy47v58923c";
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};
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patches = [
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# Fix gcc-13 build failure:
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# https://github.com/voutcn/megahit/pull/366
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(fetchpatch {
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name = "gcc-13.patch";
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url = "https://github.com/voutcn/megahit/commit/4cb2f793503087163bda8592222f105f27e33e66.patch";
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hash = "sha256-b5mhzif+OPcMjmg+BnaUc5CB6Acn/KTBOJEw+WYEhbs=";
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})
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];
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nativeBuildInputs = [ cmake ];
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buildInputs = [ zlib ];
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cmakeFlags = lib.optionals stdenv.hostPlatform.isStatic [
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"-DSTATIC_BUILD=ON"
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];
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meta = with lib; {
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description = "Ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph";
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license = licenses.gpl3;
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homepage = "https://github.com/voutcn/megahit";
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maintainers = with maintainers; [ luispedro ];
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platforms = [ "x86_64-linux" ];
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};
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}
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