63 lines
1.4 KiB
Nix
63 lines
1.4 KiB
Nix
{
|
|
lib,
|
|
buildPythonPackage,
|
|
fetchFromGitHub,
|
|
fetchpatch,
|
|
pythonOlder,
|
|
pytestCheckHook,
|
|
poetry-core,
|
|
jsonschema,
|
|
numpy,
|
|
pydicom,
|
|
simpleitk,
|
|
}:
|
|
|
|
buildPythonPackage rec {
|
|
pname = "pydicom-seg";
|
|
version = "0.4.1";
|
|
format = "pyproject";
|
|
|
|
disabled = pythonOlder "3.7";
|
|
|
|
src = fetchFromGitHub {
|
|
owner = "razorx89";
|
|
repo = pname;
|
|
rev = "refs/tags/v${version}";
|
|
hash = "sha256-2Y3fZHKfZqdp5EU8HfVsmJ5JFfVGZuAR7+Kj7qaTiPM=";
|
|
fetchSubmodules = true;
|
|
};
|
|
|
|
patches = [
|
|
# https://github.com/razorx89/pydicom-seg/pull/54
|
|
(fetchpatch {
|
|
name = "replace-poetry-with-poetry-core.patch";
|
|
url = "https://github.com/razorx89/pydicom-seg/commit/ac91eaefe3b0aecfe745869972c08de5350d2b61.patch";
|
|
hash = "sha256-xBOVjWZPjyQ8gSj6JLe9B531e11TI3FUFFtL+IelZOM=";
|
|
})
|
|
];
|
|
|
|
pythonRelaxDeps = [ "jsonschema" ];
|
|
|
|
nativeBuildInputs = [
|
|
poetry-core
|
|
];
|
|
|
|
propagatedBuildInputs = [
|
|
jsonschema
|
|
numpy
|
|
pydicom
|
|
simpleitk
|
|
];
|
|
|
|
nativeCheckInputs = [ pytestCheckHook ];
|
|
|
|
pythonImportsCheck = [ "pydicom_seg" ];
|
|
|
|
meta = with lib; {
|
|
description = "Medical segmentation file reading and writing";
|
|
homepage = "https://github.com/razorx89/pydicom-seg";
|
|
changelog = "https://github.com/razorx89/pydicom-seg/releases/tag/v${version}";
|
|
license = licenses.mit;
|
|
maintainers = with maintainers; [ bcdarwin ];
|
|
};
|
|
}
|