80 lines
2.1 KiB
Nix
80 lines
2.1 KiB
Nix
{ stdenv
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, lib
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, fetchurl
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, makeWrapper
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, autoPatchelfHook
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, jdk11
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, makeDesktopItem
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, copyDesktopItems
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, runtimeShell
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, unzip
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}:
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stdenv.mkDerivation rec {
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pname = "fiji";
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version = "20240614-2117";
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src = fetchurl {
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url = "https://downloads.imagej.net/fiji/archive/${version}/fiji-nojre.zip";
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sha256 = "sha256-OCNnN8CYniNEIfKRHRBoJ3Fo+u5AwXoPJAzUCc4P+f0=";
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};
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dontBuild = true;
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nativeBuildInputs = [ autoPatchelfHook makeWrapper copyDesktopItems unzip ];
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buildInputs = [ stdenv.cc.cc.lib ];
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desktopItems = [
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(makeDesktopItem {
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name = "fiji";
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exec = "fiji %F";
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tryExec = "fiji";
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icon = "fiji";
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mimeTypes = [ "image/*" ];
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comment = "Scientific Image Analysis";
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desktopName = "Fiji Is Just ImageJ";
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genericName = "Fiji Is Just ImageJ";
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categories = [ "Education" "Science" "ImageProcessing" ];
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startupNotify = true;
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startupWMClass = "fiji-Main";
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})
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];
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installPhase = ''
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runHook preInstall
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mkdir -p $out/{bin,fiji,share/pixmaps}
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cp -R * $out/fiji
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rm -f $out/fiji/jars/imagej-updater-*.jar
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# Don't create a local desktop entry and avoid deprecated garbage
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# collection option
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cat <<EOF > $out/bin/.fiji-launcher-hack
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#!${runtimeShell}
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exec \$($out/fiji/ImageJ-linux64 --default-gc --dry-run "\$@")
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EOF
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chmod +x $out/bin/.fiji-launcher-hack
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makeWrapper $out/bin/.fiji-launcher-hack $out/bin/fiji \
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--prefix PATH : ${lib.makeBinPath [ jdk11 ]} \
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--set JAVA_HOME ${jdk11.home}
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ln $out/fiji/images/icon.png $out/share/pixmaps/fiji.png
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runHook postInstall
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'';
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meta = with lib; {
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homepage = "https://imagej.net/software/fiji/";
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description = "batteries-included distribution of ImageJ2, bundling a lot of plugins which facilitate scientific image analysis";
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mainProgram = "fiji";
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platforms = [ "x86_64-linux" ];
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sourceProvenance = with sourceTypes; [
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binaryBytecode
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binaryNativeCode
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];
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license = with lib.licenses; [ gpl2Plus gpl3Plus bsd2 publicDomain ];
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maintainers = with maintainers; [ davisrichard437 ];
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};
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}
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