80 lines
1.4 KiB
Nix
80 lines
1.4 KiB
Nix
{ lib
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, buildPythonPackage
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, pythonOlder
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, fetchFromGitHub
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, pytestCheckHook
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, arviz
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, blackjax
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, formulae
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, graphviz
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, numpy
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, numpyro
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, pandas
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, pymc
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, scipy
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, setuptools
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}:
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buildPythonPackage rec {
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pname = "bambi";
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version = "0.10.0";
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format = "pyproject";
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disabled = pythonOlder "3.8";
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src = fetchFromGitHub {
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owner = "bambinos";
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repo = pname;
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rev = "refs/tags/${version}";
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hash = "sha256-D04eTAlckEqgKA+59BRljlyneHYoqqZvLYmt/gBLHcU=";
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};
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nativeBuildInputs = [
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setuptools
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];
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propagatedBuildInputs = [
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arviz
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formulae
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numpy
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pandas
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pymc
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scipy
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];
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preCheck = ''
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export HOME=$(mktemp -d)
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'';
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nativeCheckInputs = [
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blackjax
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graphviz
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numpyro
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pytestCheckHook
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];
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disabledTests = [
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# Tests require network access
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"test_custom_prior"
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"test_data_is_copied"
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"test_distributional_model"
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"test_gamma_with_splines"
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"test_non_distributional_model_with_categories"
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"test_non_distributional_model"
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"test_normal_with_splines"
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"test_predict_offset"
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# Assertion issue
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"test_custom_likelihood_function"
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];
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pythonImportsCheck = [
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"bambi"
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];
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meta = with lib; {
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homepage = "https://bambinos.github.io/bambi";
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description = "High-level Bayesian model-building interface";
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license = licenses.mit;
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maintainers = with maintainers; [ bcdarwin ];
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};
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}
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