33 lines
1,011 B
Nix
33 lines
1,011 B
Nix
{ lib, python3, fetchurl }:
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python3.pkgs.buildPythonPackage rec {
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pname = "MACS2";
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version = "2.2.7.1";
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src = python3.pkgs.fetchPypi {
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inherit pname version;
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sha256 = "1rcxj943kgzs746f5jrb72x1cp4v50rk3qmad0m99a02vndscb5d";
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};
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postPatch = ''
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# remove version check which breaks on 3.10
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substituteInPlace setup.py \
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--replace 'if float(sys.version[:3])<3.6:' 'if False:'
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'';
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propagatedBuildInputs = with python3.pkgs; [ numpy ];
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# To prevent ERROR: diffpeak_cmd (unittest.loader._FailedTest) for obsolete
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# function (ImportError: Failed to import test module: diffpeak_cmd)
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doCheck = false;
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pythonImportsCheck = [ "MACS2" ];
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meta = with lib; {
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description = "Model-based Analysis for ChIP-Seq";
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license = licenses.bsd3;
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maintainers = with maintainers; [ gschwartz ];
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platforms = platforms.linux;
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# error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘use_tracing’; did you mean ‘tracing’?
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broken = true;
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};
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}
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