35 lines
1.1 KiB
Nix
35 lines
1.1 KiB
Nix
{ stdenv, lib, fetchurl, python3Packages, cmake, python3 }:
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python3Packages.buildPythonApplication rec {
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pname = "obitools3";
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version = "3.0.1b11";
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src = fetchurl {
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url = "https://git.metabarcoding.org/obitools/${pname}/repository/v${version}/archive.tar.gz";
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sha256 = "1x7a0nrr9agg1pfgq8i1j8r1p6c0jpyxsv196ylix1dd2iivmas1";
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};
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nativeBuildInputs = [ python3Packages.cython cmake ];
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postPatch = lib.optionalString stdenv.isAarch64 ''
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substituteInPlace setup.py \
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--replace "'-msse2'," ""
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'';
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preBuild = ''
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substituteInPlace src/CMakeLists.txt --replace \$'{PYTHONLIB}' "$out/lib/${python3.libPrefix}/site-packages";
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export NIX_CFLAGS_COMPILE="-L $out/lib/${python3.libPrefix}/site-packages $NIX_CFLAGS_COMPILE"
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'';
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dontConfigure = true;
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doCheck = true;
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meta = with lib ; {
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description = "Management of analyses and data in DNA metabarcoding";
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homepage = "https://git.metabarcoding.org/obitools/obitools3";
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license = licenses.cecill20;
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maintainers = [ maintainers.bzizou ];
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platforms = platforms.all;
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};
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}
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