46 lines
1.4 KiB
Nix
46 lines
1.4 KiB
Nix
{ stdenv, fetchFromGitHub, cmake, makeWrapper, flex, bison, perl, TextFormat,
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libminc, libjpeg, nifticlib, zlib }:
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stdenv.mkDerivation rec {
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pname = "minc-tools";
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version = "unstable-2019-12-04";
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src = fetchFromGitHub {
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owner = "BIC-MNI";
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repo = pname;
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rev = "d4dddfdb4e4fa0cea389b8fdce51cfc076565d94";
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sha256 = "1wwdss59qq4hz1jp35qylfswzzv0d37if23al0srnxkkgc5f8zng";
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};
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patches = [ ./fix-netcdf-header.patch ];
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# add missing CMake module to build NIFTI support
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# (the maintainers normally build libminc and minc-tools in a meta-project)
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postPatch = ''
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cp ${libminc.src}/cmake-modules/FindNIFTI.cmake cmake-modules
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'';
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nativeBuildInputs = [ cmake flex bison makeWrapper ];
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buildInputs = [ libminc libjpeg nifticlib zlib ];
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propagatedBuildInputs = [ perl TextFormat ];
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cmakeFlags = [ "-DLIBMINC_DIR=${libminc}/lib/"
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"-DZNZ_INCLUDE_DIR=${nifticlib}/include/nifti"
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"-DNIFTI_INCLUDE_DIR=${nifticlib}/include/nifti" ];
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postFixup = ''
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for prog in minccomplete minchistory mincpik; do
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wrapProgram $out/bin/$prog --prefix PERL5LIB : $PERL5LIB
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done
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'';
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enableParallelBuilding = true;
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meta = with stdenv.lib; {
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homepage = "https://github.com/BIC-MNI/minc-tools";
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description = "Command-line utilities for working with MINC files";
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maintainers = with maintainers; [ bcdarwin ];
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platforms = platforms.unix;
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license = licenses.free;
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};
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}
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