54 lines
1.4 KiB
Nix
54 lines
1.4 KiB
Nix
{ lib
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, stdenv
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, bzip2
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, cmake
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, fetchurl
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, fftw
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, llvmPackages
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, zlib
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}:
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stdenv.mkDerivation (finalAttrs: {
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pname = "cmtk";
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version = "3.3.2";
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src = fetchurl {
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name = "cmtk-source.tar.gz";
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url = "https://www.nitrc.org/frs/download.php/13188/CMTK-${finalAttrs.version}-Source.tar.gz//?i_agree=1&download_now=1";
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hash = "sha256-iE164NCOSOypZLLZfZy9RTyrS+YnY9ECqfb4QhlsMS4=";
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};
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postPatch = ''
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substituteInPlace apps/vtkxform.cxx --replace-fail \
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"float xyzFloat[3] = { xyz[0], xyz[1], xyz[2] };" \
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"float xyzFloat[3] = { (float)xyz[0], (float)xyz[1], (float)xyz[2] };"
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'';
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nativeBuildInputs = [ cmake ];
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buildInputs = [
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bzip2
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fftw
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zlib
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] ++ lib.optionals stdenv.cc.isClang [
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llvmPackages.openmp
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];
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cmakeFlags = [
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(lib.cmakeFeature "CMAKE_CXX_STANDARD" "14")
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] ++ lib.optionals (stdenv.hostPlatform.isDarwin && stdenv.hostPlatform.isAarch64) [
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(lib.cmakeFeature "CMAKE_CXX_FLAGS" "-Dfinite=isfinite")
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];
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meta = with lib; {
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description = "Computational Morphometry Toolkit";
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mainProgram = "cmtk";
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longDescription = ''A software toolkit for computational morphometry of
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biomedical images, CMTK comprises a set of command line tools and a
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back-end general-purpose library for processing and I/O'';
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maintainers = with maintainers; [ tbenst ];
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platforms = platforms.all;
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license = licenses.gpl3Plus;
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homepage = "https://www.nitrc.org/projects/cmtk/";
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};
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})
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