170 lines
3.5 KiB
Nix
170 lines
3.5 KiB
Nix
{ lib
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, buildPythonPackage
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, fetchFromGitHub
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, fetchpatch
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, pythonOlder
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, pytestCheckHook
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, atpublic
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, click
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, clickhouse-cityhash
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, clickhouse-driver
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, dask
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, datafusion
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, duckdb
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, duckdb-engine
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, filelock
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, geoalchemy2
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, geopandas
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, graphviz-nox
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, lz4
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, multipledispatch
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, numpy
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, packaging
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, pandas
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, parsy
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, poetry-core
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, poetry-dynamic-versioning
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, psycopg2
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, pyarrow
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, pydantic
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, pymysql
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, pyspark
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, pytest-benchmark
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, pytest-randomly
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, pytest-mock
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, pytest-xdist
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, python
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, pytz
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, regex
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, rsync
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, shapely
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, sqlalchemy
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, sqlite
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, tabulate
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, toolz
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}:
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let
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testBackends = [
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"dask"
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"datafusion"
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"duckdb"
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"pandas"
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"sqlite"
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];
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ibisTestingData = fetchFromGitHub {
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owner = "ibis-project";
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repo = "testing-data";
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rev = "3c39abfdb4b284140ff481e8f9fbb128b35f157a";
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sha256 = "sha256-BZWi4kEumZemQeYoAtlUSw922p+R6opSWp/bmX0DjAo=";
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};
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in
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buildPythonPackage rec {
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pname = "ibis-framework";
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version = "3.1.0";
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format = "pyproject";
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disabled = pythonOlder "3.8";
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src = fetchFromGitHub {
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repo = "ibis";
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owner = "ibis-project";
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rev = version;
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hash = "sha256-/mQWQLiJa1DRZiyiA6F0/lMyn3wSY1IUwJl2S0IFkvs=";
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};
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patches = [
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(fetchpatch {
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name = "xfail-datafusion-0.4.0";
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url = "https://github.com/ibis-project/ibis/compare/c162abba4df24e0d531bd2e6a3be3109c16b43b9...6219d6caee19b6fd3171983c49cd8d6872e3564b.patch";
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hash = "sha256-pCYPntj+TwzqCtYWRf6JF5/tJC4crSXHp0aepRocHck=";
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excludes = ["poetry.lock"];
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})
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];
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nativeBuildInputs = [ poetry-core ];
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propagatedBuildInputs = [
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atpublic
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multipledispatch
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numpy
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packaging
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pandas
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parsy
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poetry-dynamic-versioning
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pydantic
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pytz
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regex
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tabulate
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toolz
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];
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checkInputs = [
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pytestCheckHook
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click
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filelock
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pytest-benchmark
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pytest-mock
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pytest-randomly
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pytest-xdist
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rsync
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] ++ lib.concatMap (name: passthru.optional-dependencies.${name}) testBackends;
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preBuild = ''
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# setup.py exists only for developer convenience and is automatically generated
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# it gets in the way in nixpkgs so we remove it
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rm setup.py
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'';
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pytestFlagsArray = [
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"--dist=loadgroup"
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"-m"
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"'${lib.concatStringsSep " or " testBackends} or core'"
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# this test fails on nixpkgs datafusion version (0.4.0), but works on
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# datafusion 0.6.0
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"-k"
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"'not datafusion-no_op'"
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];
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preCheck = ''
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set -eo pipefail
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export IBIS_TEST_DATA_DIRECTORY
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IBIS_TEST_DATA_DIRECTORY="$(mktemp -d)"
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# copy the test data to a directory
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rsync --chmod=Du+rwx,Fu+rw --archive "${ibisTestingData}/" "$IBIS_TEST_DATA_DIRECTORY"
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'';
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postCheck = ''
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rm -r "$IBIS_TEST_DATA_DIRECTORY"
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'';
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pythonImportsCheck = [
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"ibis"
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] ++ map (backend: "ibis.backends.${backend}") testBackends;
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passthru = {
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optional-dependencies = {
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clickhouse = [ clickhouse-cityhash clickhouse-driver lz4 ];
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dask = [ dask pyarrow ];
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datafusion = [ datafusion ];
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duckdb = [ duckdb duckdb-engine sqlalchemy ];
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geospatial = [ geoalchemy2 geopandas shapely ];
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mysql = [ pymysql sqlalchemy ];
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pandas = [ ];
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postgres = [ psycopg2 sqlalchemy ];
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pyspark = [ pyarrow pyspark ];
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sqlite = [ sqlalchemy sqlite ];
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visualization = [ graphviz-nox ];
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};
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};
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meta = with lib; {
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description = "Productivity-centric Python Big Data Framework";
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homepage = "https://github.com/ibis-project/ibis";
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license = licenses.asl20;
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maintainers = with maintainers; [ costrouc cpcloud ];
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};
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}
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