163 lines
3.3 KiB
Nix
163 lines
3.3 KiB
Nix
{ lib
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, stdenv
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, asdf
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, astropy
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, astropy-extension-helpers
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, astropy-helpers
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, beautifulsoup4
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, buildPythonPackage
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, drms
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, fetchPypi
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, glymur
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, h5netcdf
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, hypothesis
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, lxml
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, matplotlib
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, numpy
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, pandas
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, parfive
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, pytest-astropy
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, pytestCheckHook
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, pytest-mock
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, python-dateutil
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, pythonOlder
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, scikitimage
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, scipy
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, setuptools-scm
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, sqlalchemy
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, tqdm
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, zeep
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}:
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buildPythonPackage rec {
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pname = "sunpy";
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version = "4.0.4";
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format = "setuptools";
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disabled = pythonOlder "3.8";
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src = fetchPypi {
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inherit pname version;
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hash = "sha256-O4VjxcuJVgUjjz3VWyczCjJxvJvAL94MBnGsRn54Ld4=";
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};
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nativeBuildInputs = [
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astropy-extension-helpers
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setuptools-scm
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];
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propagatedBuildInputs = [
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astropy
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astropy-helpers
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numpy
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parfive
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];
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passthru.optional-dependencies = {
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asdf = [
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asdf
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# asdf-astropy
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];
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database = [
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sqlalchemy
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];
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image = [
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scikitimage
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scipy
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];
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net = [
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beautifulsoup4
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drms
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python-dateutil
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tqdm
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zeep
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];
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jpeg2000 = [
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glymur
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lxml
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];
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timeseries = [
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# cdflib
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h5netcdf
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# h5py
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matplotlib
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pandas
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];
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};
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checkInputs = [
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hypothesis
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pytest-astropy
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pytest-mock
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pytestCheckHook
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] ++ passthru.optional-dependencies.asdf
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++ passthru.optional-dependencies.database
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++ passthru.optional-dependencies.image
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++ passthru.optional-dependencies.net
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++ passthru.optional-dependencies.timeseries;
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postPatch = ''
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substituteInPlace setup.cfg \
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--replace " --dist no" ""
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'';
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# darwin has write permission issues
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doCheck = stdenv.isLinux;
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preCheck = ''
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export HOME=$(mktemp -d)
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'';
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disabledTests = [
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"rst"
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"test_sunpy_warnings_logging"
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"test_main_nonexisting_module"
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"test_main_stdlib_module"
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"test_find_dependencies"
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];
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disabledTestPaths = [
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# Tests are very slow
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"sunpy/net/tests/test_fido.py"
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# asdf.extensions plugin issue
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"sunpy/io/special/asdf/resources/schemas/"
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"sunpy/io/special/asdf/resources/manifests/sunpy-1.0.0.yaml"
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# Requires mpl-animators package
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"sunpy/map/tests/test_compositemap.py"
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"sunpy/map/tests/test_mapbase.py"
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"sunpy/map/tests/test_mapsequence.py"
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"sunpy/map/tests/test_plotting.py"
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"sunpy/map/tests/test_reproject_to.py"
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"sunpy/net/tests/test_helioviewer.py"
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"sunpy/timeseries/tests/test_timeseriesbase.py"
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"sunpy/visualization/animator/tests/test_basefuncanimator.py"
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"sunpy/visualization/animator/tests/test_mapsequenceanimator.py"
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"sunpy/visualization/animator/tests/test_wcs.py"
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"sunpy/visualization/colormaps/tests/test_cm.py"
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# Requires cdflib package
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"sunpy/timeseries/tests/test_timeseries_factory.py"
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# Requires jplephem
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"sunpy/image/tests/test_transform.py"
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"sunpy/io/special/asdf/tests/test_coordinate_frames.py"
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"sunpy/io/special/asdf/tests/test_genericmap.py"
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# distutils is deprecated
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"sunpy/io/setup_package.py"
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];
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pytestFlagsArray = [
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"-W"
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"ignore::DeprecationWarning"
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];
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# Wants a configuration file
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# pythonImportsCheck = [
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# "sunpy"
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# ];
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meta = with lib; {
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description = "Python for Solar Physics";
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homepage = "https://sunpy.org";
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license = licenses.bsd2;
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maintainers = with maintainers; [ costrouc ];
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};
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}
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