82 lines
1.8 KiB
Nix
82 lines
1.8 KiB
Nix
{ lib
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, buildPythonPackage
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, pythonOlder
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, fetchPypi
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, jax
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, jaxlib
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, multipledispatch
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, numpy
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, tqdm
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, funsor
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, pytestCheckHook
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# TODO: uncomment when tensorflow-probability gets fixed.
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# , tensorflow-probability
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}:
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buildPythonPackage rec {
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pname = "numpyro";
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version = "0.13.2";
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format = "setuptools";
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disabled = pythonOlder "3.9";
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src = fetchPypi {
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inherit version pname;
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hash = "sha256-Um8LFVGAlMeOaN9uMwycHJzqEnTaxp8FYXIk+m2VTug=";
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};
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propagatedBuildInputs = [
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jax
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jaxlib
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multipledispatch
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numpy
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tqdm
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];
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nativeCheckInputs = [
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funsor
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pytestCheckHook
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# TODO: uncomment when tensorflow-probability gets fixed.
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# tensorflow-probability
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];
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pythonImportsCheck = [
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"numpyro"
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];
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disabledTests = [
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# AssertionError due to tolerance issues
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"test_beta_binomial_log_prob"
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"test_collapse_beta"
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"test_cpu"
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"test_gamma_poisson"
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"test_gof"
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"test_hpdi"
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"test_kl_dirichlet_dirichlet"
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"test_kl_univariate"
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"test_mean_var"
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# Tests want to download data
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"data_load"
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"test_jsb_chorales"
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# RuntimeWarning: overflow encountered in cast
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"test_zero_inflated_logits_probs_agree"
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# NameError: unbound axis name: _provenance
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"test_model_transformation"
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# Using deprecated (removed in jax==0.4.24) jax.core.safe_map
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# https://github.com/pyro-ppl/numpyro/issues/1733
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"test_beta_bernoulli"
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];
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# TODO: remove when tensorflow-probability gets fixed.
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disabledTestPaths = [
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"test/test_distributions.py"
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];
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meta = with lib; {
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description = "Library for probabilistic programming with NumPy";
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homepage = "https://num.pyro.ai/";
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changelog = "https://github.com/pyro-ppl/numpyro/releases/tag/${version}";
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license = licenses.asl20;
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maintainers = with maintainers; [ fab ];
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};
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}
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