depot/third_party/nixpkgs/pkgs/applications/science/biology/mrbayes/default.nix
Default email 8ac5e011d6 Project import generated by Copybara.
GitOrigin-RevId: 2c3273caa153ee8eb5786bc8141b85b859e7efd7
2020-04-24 19:36:52 -04:00

29 lines
1.1 KiB
Nix

{stdenv, fetchurl, readline}:
stdenv.mkDerivation rec {
# FIXME: replace Makefile so we can build MPI & MAC support
name = "mrbayes-3.1.2";
src = fetchurl {
url = "mirror://sourceforge/mrbayes/${name}.tar.gz";
sha256 = "1x7j8ca5wjrqrxmcpvd375ydm3s2pbkzykv8xfhg1jc037g560n6";
};
builder = ./builder.sh;
buildInputs = [readline];
meta = {
description = "Bayesian Inference of Phylogeny";
longDescription = ''
Bayesian inference of phylogeny is based upon a
quantity called the posterior probability distribution of trees, which is
the probability of a tree conditioned on the observations. The conditioning
is accomplished using Bayes's theorem. The posterior probability
distribution of trees is impossible to calculate analytically; instead,
MrBayes uses a simulation technique called Markov chain Monte Carlo (or
MCMC) to approximate the posterior probabilities of trees.
'';
license = "GPL2";
homepage = "http://mrbayes.csit.fsu.edu/";
platforms = stdenv.lib.platforms.linux;
};
}