25 lines
697 B
Nix
25 lines
697 B
Nix
{ lib, nimPackages, fetchFromGitHub, docopt, hts, pcre }:
|
|
|
|
nimPackages.buildNimPackage rec {
|
|
pname = "mosdepth";
|
|
version = "0.3.4";
|
|
nimBinOnly = true;
|
|
|
|
src = fetchFromGitHub {
|
|
owner = "brentp";
|
|
repo = "mosdepth";
|
|
rev = "v${version}";
|
|
sha256 = "sha256-7uteYTCbAaXedPqk0WtHpqTfUWH/+rRW8aSlFixkEko=";
|
|
};
|
|
|
|
buildInputs = [ docopt hts pcre ];
|
|
nimFlags = hts.nimFlags ++ [ "--threads:off" ];
|
|
|
|
meta = with lib; {
|
|
description = "fast BAM/CRAM depth calculation for WGS, exome, or targeted sequencing";
|
|
license = licenses.mit;
|
|
homepage = "https://github.com/brentp/mosdepth";
|
|
maintainers = with maintainers; [ jbedo ];
|
|
platforms = platforms.linux;
|
|
};
|
|
}
|