224 lines
5.1 KiB
Nix
224 lines
5.1 KiB
Nix
{
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lib,
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stdenv,
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baycomp,
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bottleneck,
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buildPythonPackage,
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chardet,
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copyDesktopItems,
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pythonRelaxDepsHook,
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cython,
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catboost,
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xgboost,
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fetchFromGitHub,
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fetchurl,
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httpx,
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joblib,
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keyring,
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keyrings-alt,
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makeDesktopItem,
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matplotlib,
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nix-update-script,
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numpy,
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oldest-supported-numpy,
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openpyxl,
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opentsne,
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orange-canvas-core,
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orange-widget-base,
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pandas,
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pytestCheckHook,
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pytest-qt,
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pyqtgraph,
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pyqtwebengine,
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python,
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python-louvain,
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pythonOlder,
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pyyaml,
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pip,
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qt5,
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qtconsole,
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recommonmark,
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requests,
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scikit-learn,
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scipy,
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serverfiles,
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setuptools,
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sphinx,
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wheel,
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xlrd,
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xlsxwriter,
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}:
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let
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self = buildPythonPackage rec {
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pname = "orange3";
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version = "3.36.2";
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pyproject = true;
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disabled = pythonOlder "3.7";
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src = fetchFromGitHub {
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owner = "biolab";
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repo = "orange3";
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rev = "refs/tags/${version}";
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hash = "sha256-v9lk5vGhBaR2PHZ+Jq0hy1WaCsbeLe+vZlTaHBkfacU=";
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};
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postPatch = ''
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substituteInPlace pyproject.toml \
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--replace-fail 'cython>=3.0' 'cython'
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# disable update checking
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echo -e "def check_for_updates():\n\tpass" >> Orange/canvas/__main__.py
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'';
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nativeBuildInputs = [
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copyDesktopItems
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pythonRelaxDepsHook
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oldest-supported-numpy
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cython
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qt5.wrapQtAppsHook
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recommonmark
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setuptools
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sphinx
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wheel
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];
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enableParallelBuilding = true;
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pythonRelaxDeps = [ "scikit-learn" ];
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propagatedBuildInputs = [
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numpy
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scipy
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chardet
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catboost
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xgboost
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openpyxl
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opentsne
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qtconsole
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setuptools
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bottleneck
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matplotlib
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joblib
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requests
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keyring
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scikit-learn
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pandas
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pyqtwebengine
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serverfiles
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orange-canvas-core
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python-louvain
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xlrd
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xlsxwriter
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httpx
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pyqtgraph
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orange-widget-base
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keyrings-alt
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pyyaml
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baycomp
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pip
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];
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# FIXME: ImportError: cannot import name '_variable' from partially initialized module 'Orange.data' (most likely due to a circular import) (/build/source/Orange/data/__init__.py)
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doCheck = false;
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# FIXME: pythonRelaxDeps is not relaxing the scikit-learn version constraint, had to disable this
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dontCheckRuntimeDeps = true;
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pythonImportsCheck = [
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"Orange"
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"Orange.data._variable"
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];
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desktopItems = [
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(makeDesktopItem {
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name = "orange";
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exec = "orange-canvas";
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desktopName = "Orange Data Mining";
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genericName = "Data Mining Suite";
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comment = "Explore, analyze, and visualize your data";
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icon = "orange-canvas";
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mimeTypes = [ "application/x-extension-ows" ];
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categories = [
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"Science"
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"Education"
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"ArtificialIntelligence"
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"DataVisualization"
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"NumericalAnalysis"
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"Qt"
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];
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keywords = [
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"Machine Learning"
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"Scientific Visualization"
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"Statistical Analysis"
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];
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})
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];
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postInstall = ''
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wrapProgram $out/bin/orange-canvas \
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"${"$"}{qtWrapperArgs[@]}"
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mkdir -p $out/share/icons/hicolor/{256x256,48x48}/apps
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cp distribute/icon-256.png $out/share/icons/hicolor/256x256/apps/orange-canvas.png
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cp distribute/icon-48.png $out/share/icons/hicolor/48x48/apps/orange-canvas.png
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'';
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passthru = {
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updateScript = nix-update-script { };
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tests.unittests = stdenv.mkDerivation {
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name = "${self.name}-tests";
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inherit (self) src;
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preCheck = ''
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export HOME=$(mktemp -d)
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export QT_PLUGIN_PATH="${qt5.qtbase.bin}/${qt5.qtbase.qtPluginPrefix}"
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export QT_QPA_PLATFORM_PLUGIN_PATH="${qt5.qtbase.bin}/lib/qt-${qt5.qtbase.version}/plugins";
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export QT_QPA_PLATFORM=offscreen
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rm Orange -rf
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cp -r ${self}/${python.sitePackages}/Orange .
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chmod +w -R .
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substituteInPlace Orange/classification/tests/test_xgb_cls.py \
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--replace test_learners mk_test_learners
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substituteInPlace Orange/modelling/tests/test_xgb.py \
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--replace test_learners mk_test_learners
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substituteInPlace Orange/**/tests/*.py \
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--replace test_filename filename_test
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# TODO: debug why orange is crashing on GC, may be a upstream issue
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chmod +x Orange/__init__.py
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echo "import gc; gc.disable()" | tee -a Orange/__init__.py
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'';
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nativeBuildInputs = [
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pytestCheckHook
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pytest-qt
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];
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postCheck = ''
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touch $out
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'';
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doBuild = false;
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doInstall = false;
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buildInputs = [ self ];
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};
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};
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meta = with lib; {
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description = "Data mining and visualization toolbox for novice and expert alike";
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homepage = "https://orangedatamining.com/";
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changelog = "https://github.com/biolab/orange3/blob/${version}/CHANGELOG.md";
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license = with licenses; [ gpl3Plus ];
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maintainers = with maintainers; [ lucasew ];
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mainProgram = "orange-canvas";
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};
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};
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in
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self
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