47 lines
1.2 KiB
Nix
47 lines
1.2 KiB
Nix
{ lib
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, stdenv
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, autoreconfHook
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, fetchFromGitHub
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, bzip2
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, xz
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, zlib
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}:
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stdenv.mkDerivation (finalAttrs: {
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# Same name as the Debian library
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pname = "libstaden-read";
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version = "1.15.0";
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src = fetchFromGitHub {
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owner = "jkbonfield";
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repo = "io_lib";
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rev = "io_lib-" + builtins.replaceStrings ["."] ["-"] finalAttrs.version;
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fetchSubmodules = true;
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hash = "sha256-2Dlx+MXmqar81/Xmf0oE+6lWX461EDYijiZsZf/VD28=";
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};
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patches = [
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# Needed so that the lib can be detected
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./libstaden-install-config-header.patch
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];
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buildInputs = [ bzip2 xz zlib ];
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nativeBuildInputs = [ autoreconfHook ];
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# autoreconfHook does not descend into htscodecs folder
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preAutoreconf = ''
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pushd ./htscodecs
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autoreconf --install --force --verbose
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pushd
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'';
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meta = {
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description = "C library for reading/writing various DNA sequence formats";
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homepage = "https://staden.sourceforge.net";
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downloadPage = "https://github.com/jkbonfield/io_lib/releases";
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changelog = "https://github.com/jkbonfield/io_lib/blob/${finalAttrs.src.rev}/CHANGES";
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license = with lib.licenses; [ bsd3 free ];
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platforms = lib.platforms.all;
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maintainers = [ lib.maintainers.kupac ];
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};
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})
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